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annotate test-data/gffcompare_out1.stats @ 6:3c5e024a18cf draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit 8e8c67f4aa5ab37fc28c512b4e9e7f26a2d1e604
author iuc
date Fri, 04 Oct 2024 08:47:42 +0000
parents f99dd58de04f
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f99dd58de04f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8028c2640d2d213da5097df2341a8281fe0b7c8
iuc
parents: 3
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1 # gffcompare v0.12.6 | Command line was:
f99dd58de04f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8028c2640d2d213da5097df2341a8281fe0b7c8
iuc
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2 #gffcompare -V -d 100 -p TCONS gffcompare_in1_gtf gffcompare_in2_gtf
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3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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3 #
3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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f99d7825a501 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit a5352fb7f073b0083b750c5cf7d283ebcc16b30d
iuc
parents: 0
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5 #= Summary for dataset: gffcompare_in1_gtf
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2bb86e2c417f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8a752199588db982182cbe7fffbcb8512313526
iuc
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6 # Query mRNAs : 5 in 5 loci (0 multi-exon transcripts)
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3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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7 # (0 multi-transcript loci, ~1.0 transcripts per locus)
3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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8
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f99d7825a501 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit a5352fb7f073b0083b750c5cf7d283ebcc16b30d
iuc
parents: 0
diff changeset
9 #= Summary for dataset: gffcompare_in2_gtf
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2bb86e2c417f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8a752199588db982182cbe7fffbcb8512313526
iuc
parents: 2
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10 # Query mRNAs : 4 in 4 loci (0 multi-exon transcripts)
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3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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11 # (0 multi-transcript loci, ~1.0 transcripts per locus)
3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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12
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2bb86e2c417f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8a752199588db982182cbe7fffbcb8512313526
iuc
parents: 2
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13 Total union super-loci across all input datasets: 7
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3c97c841a443 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
iuc
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14 (0 multi-transcript, ~1.1 transcripts per locus)
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2bb86e2c417f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8a752199588db982182cbe7fffbcb8512313526
iuc
parents: 2
diff changeset
15 8 out of 8 consensus transcripts written in gffcmp.combined.gtf (0 discarded as redundant)