view test-data/gffcompare_out1.gtf @ 6:3c5e024a18cf draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit 8e8c67f4aa5ab37fc28c512b4e9e7f26a2d1e604
author iuc
date Fri, 04 Oct 2024 08:47:42 +0000
parents f99dd58de04f
children
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chr1	Cufflinks	transcript	12	20	.	+	.	transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; oId "CUFF.3.1"; tss_id "TSS1"; num_samples "1";
chr1	Cufflinks	exon	12	20	.	+	.	transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; exon_number "1";
chr1	Cufflinks	transcript	32	40	.	+	.	transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; oId "CUFF.7.1"; tss_id "TSS2"; num_samples "1";
chr1	Cufflinks	exon	32	40	.	+	.	transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; exon_number "1";
chr1	Cufflinks	transcript	42	47	.	+	.	transcript_id "TCONS_00000007"; gene_id "XLOC_000003"; oId "CUFF.7.1"; contained_in "TCONS_00000002"; tss_id "TSS3"; num_samples "1";
chr1	Cufflinks	exon	42	47	.	+	.	transcript_id "TCONS_00000007"; gene_id "XLOC_000003"; exon_number "1";
chr1	Cufflinks	transcript	42	50	.	+	.	transcript_id "TCONS_00000002"; gene_id "XLOC_000003"; oId "CUFF.9.1"; tss_id "TSS3"; num_samples "1";
chr1	Cufflinks	exon	42	50	.	+	.	transcript_id "TCONS_00000002"; gene_id "XLOC_000003"; exon_number "1";
chr1	Cufflinks	transcript	52	60	.	+	.	transcript_id "TCONS_00000003"; gene_id "XLOC_000004"; oId "CUFF.10.1"; tss_id "TSS4"; num_samples "1";
chr1	Cufflinks	exon	52	60	.	+	.	transcript_id "TCONS_00000003"; gene_id "XLOC_000004"; exon_number "1";
chr1	Cufflinks	transcript	2	10	.	-	.	transcript_id "TCONS_00000004"; gene_id "XLOC_000005"; oId "CUFF.1.1"; tss_id "TSS5"; num_samples "2";
chr1	Cufflinks	exon	2	10	.	-	.	transcript_id "TCONS_00000004"; gene_id "XLOC_000005"; exon_number "1";
chr1	Cufflinks	transcript	15	20	.	-	.	transcript_id "TCONS_00000005"; gene_id "XLOC_000006"; oId "CUFF.3.1"; tss_id "TSS6"; num_samples "1";
chr1	Cufflinks	exon	15	20	.	-	.	transcript_id "TCONS_00000005"; gene_id "XLOC_000006"; exon_number "1";
chr1	Cufflinks	transcript	22	30	.	-	.	transcript_id "TCONS_00000008"; gene_id "XLOC_000007"; oId "CUFF.5.1"; tss_id "TSS7"; num_samples "1";
chr1	Cufflinks	exon	22	30	.	-	.	transcript_id "TCONS_00000008"; gene_id "XLOC_000007"; exon_number "1";