Mercurial > repos > iuc > graphlan_annotate

comparison test-data/intermediary_tree @ 1:cf1df6b2220a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2/ commit b5bd1ab6e4f3a14819dbc2bdad33006bc6131b3c"
author iuc
date Fri, 24 Jan 2020 16:25:56 -0500
parents 5d6f8f0bef7c
children
comparison
equal deleted inserted replaced
0:5d6f8f0bef7c 1:cf1df6b2220a
44 <clade> 44 <clade>
45 <name>k__Bacteria</name> 45 <name>k__Bacteria</name>
46 <branch_length>1.0</branch_length> 46 <branch_length>1.0</branch_length>
47 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">200.0</property> 47 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">200.0</property>
48 <clade> 48 <clade>
49 <name>p__Actinobacteria</name>
50 <branch_length>1.0</branch_length>
51 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
52 <clade>
53 <name>c__Actinobacteria</name>
54 <branch_length>1.0</branch_length>
55 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
56 <clade>
57 <name>o__Actinomycetales</name>
58 <branch_length>1.0</branch_length>
59 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
60 <clade>
61 <name>f__Propionibacteriaceae</name>
62 <branch_length>1.0</branch_length>
63 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
64 <clade>
65 <name>g__Propionibacterium</name>
66 <branch_length>1.0</branch_length>
67 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
68 <clade>
69 <name>s__Propionibacterium_acnes</name>
70 <branch_length>1.0</branch_length>
71 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
72 <clade>
73 <name>t__Propionibacterium_acnes_unclassified</name>
74 <branch_length>1.0</branch_length>
75 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
76 </clade>
77 </clade>
78 </clade>
79 </clade>
80 </clade>
81 </clade>
82 </clade>
83 <clade>
49 <name>p__Deinococcus_Thermus</name> 84 <name>p__Deinococcus_Thermus</name>
50 <branch_length>1.0</branch_length> 85 <branch_length>1.0</branch_length>
51 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> 86 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property>
52 <clade> 87 <clade>
53 <name>c__Deinococci</name> 88 <name>c__Deinococci</name>
64 <clade> 99 <clade>
65 <name>g__Deinococcus</name> 100 <name>g__Deinococcus</name>
66 <branch_length>1.0</branch_length> 101 <branch_length>1.0</branch_length>
67 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> 102 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property>
68 <clade> 103 <clade>
104 <name>s__Deinococcus_radiodurans</name>
105 <branch_length>1.0</branch_length>
106 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property>
107 <clade>
108 <name>t__GCF_000008565</name>
109 <branch_length>1.0</branch_length>
110 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property>
111 </clade>
112 </clade>
113 <clade>
69 <name>s__Deinococcus_unclassified</name> 114 <name>s__Deinococcus_unclassified</name>
70 <branch_length>1.0</branch_length> 115 <branch_length>1.0</branch_length>
71 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1817307606</property> 116 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1817307606</property>
72 </clade>
73 <clade>
74 <name>s__Deinococcus_radiodurans</name>
75 <branch_length>1.0</branch_length>
76 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property>
77 <clade>
78 <name>t__GCF_000008565</name>
79 <branch_length>1.0</branch_length>
80 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property>
81 </clade>
82 </clade> 117 </clade>
83 </clade> 118 </clade>
84 </clade> 119 </clade>
85 </clade> 120 </clade>
86 </clade> 121 </clade>
89 <name>p__Firmicutes</name> 124 <name>p__Firmicutes</name>
90 <branch_length>1.0</branch_length> 125 <branch_length>1.0</branch_length>
91 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">183.285013514</property> 126 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">183.285013514</property>
92 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> 127 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property>
93 <clade> 128 <clade>
94 <name>c__Clostridia</name>
95 <branch_length>1.0</branch_length>
96 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
97 <clade>
98 <name>o__Clostridiales</name>
99 <branch_length>1.0</branch_length>
100 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
101 <clade>
102 <name>f__Clostridiaceae</name>
103 <branch_length>1.0</branch_length>
104 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
105 <clade>
106 <name>g__Clostridium</name>
107 <branch_length>1.0</branch_length>
108 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
109 <clade>
110 <name>s__Clostridium_beijerinckii</name>
111 <branch_length>1.0</branch_length>
112 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
113 <clade>
114 <name>t__Clostridium_beijerinckii_unclassified</name>
115 <branch_length>1.0</branch_length>
116 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
117 </clade>
118 </clade>
119 </clade>
120 </clade>
121 </clade>
122 </clade>
123 <clade>
124 <name>c__Bacilli</name> 129 <name>c__Bacilli</name>
125 <branch_length>1.0</branch_length> 130 <branch_length>1.0</branch_length>
126 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">182.398015269</property> 131 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">182.398015269</property>
127 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> 132 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property>
128 <clade> 133 <clade>
178 <clade> 183 <clade>
179 <name>g__Streptococcus</name> 184 <name>g__Streptococcus</name>
180 <branch_length>1.0</branch_length> 185 <branch_length>1.0</branch_length>
181 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">96.1062970373</property> 186 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">96.1062970373</property>
182 <clade> 187 <clade>
188 <name>s__Streptococcus_agalactiae</name>
189 <branch_length>1.0</branch_length>
190 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property>
191 <clade>
192 <name>t__Streptococcus_agalactiae_unclassified</name>
193 <branch_length>1.0</branch_length>
194 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property>
195 </clade>
196 </clade>
197 <clade>
183 <name>s__Streptococcus_mutans</name> 198 <name>s__Streptococcus_mutans</name>
184 <branch_length>1.0</branch_length> 199 <branch_length>1.0</branch_length>
185 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> 200 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property>
186 <clade> 201 <clade>
187 <name>t__Streptococcus_mutans_unclassified</name> 202 <name>t__Streptococcus_mutans_unclassified</name>
188 <branch_length>1.0</branch_length> 203 <branch_length>1.0</branch_length>
189 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> 204 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property>
190 </clade> 205 </clade>
191 </clade> 206 </clade>
192 <clade> 207 </clade>
193 <name>s__Streptococcus_agalactiae</name> 208 </clade>
194 <branch_length>1.0</branch_length> 209 </clade>
195 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> 210 </clade>
196 <clade> 211 <clade>
197 <name>t__Streptococcus_agalactiae_unclassified</name> 212 <name>c__Clostridia</name>
198 <branch_length>1.0</branch_length> 213 <branch_length>1.0</branch_length>
199 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> 214 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
200 </clade> 215 <clade>
201 </clade> 216 <name>o__Clostridiales</name>
202 </clade> 217 <branch_length>1.0</branch_length>
203 </clade> 218 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
204 </clade> 219 <clade>
205 </clade> 220 <name>f__Clostridiaceae</name>
206 </clade> 221 <branch_length>1.0</branch_length>
207 <clade> 222 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
208 <name>p__Actinobacteria</name> 223 <clade>
209 <branch_length>1.0</branch_length> 224 <name>g__Clostridium</name>
210 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> 225 <branch_length>1.0</branch_length>
211 <clade> 226 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
212 <name>c__Actinobacteria</name> 227 <clade>
213 <branch_length>1.0</branch_length> 228 <name>s__Clostridium_beijerinckii</name>
214 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> 229 <branch_length>1.0</branch_length>
215 <clade> 230 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
216 <name>o__Actinomycetales</name> 231 <clade>
217 <branch_length>1.0</branch_length> 232 <name>t__Clostridium_beijerinckii_unclassified</name>
218 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> 233 <branch_length>1.0</branch_length>
219 <clade> 234 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property>
220 <name>f__Propionibacteriaceae</name>
221 <branch_length>1.0</branch_length>
222 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
223 <clade>
224 <name>g__Propionibacterium</name>
225 <branch_length>1.0</branch_length>
226 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
227 <clade>
228 <name>s__Propionibacterium_acnes</name>
229 <branch_length>1.0</branch_length>
230 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
231 <clade>
232 <name>t__Propionibacterium_acnes_unclassified</name>
233 <branch_length>1.0</branch_length>
234 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property>
235 </clade> 235 </clade>
236 </clade> 236 </clade>
237 </clade> 237 </clade>
238 </clade> 238 </clade>
239 </clade> 239 </clade>
243 <name>p__Proteobacteria</name> 243 <name>p__Proteobacteria</name>
244 <branch_length>1.0</branch_length> 244 <branch_length>1.0</branch_length>
245 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">102.159086265</property> 245 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">102.159086265</property>
246 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#29cc36</property> 246 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#29cc36</property>
247 <clade> 247 <clade>
248 <name>c__Alphaproteobacteria</name>
249 <branch_length>1.0</branch_length>
250 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
251 <clade>
252 <name>o__Rhodobacterales</name>
253 <branch_length>1.0</branch_length>
254 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
255 <clade>
256 <name>f__Rhodobacteraceae</name>
257 <branch_length>1.0</branch_length>
258 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
259 <clade>
260 <name>g__Rhodobacter</name>
261 <branch_length>1.0</branch_length>
262 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
263 <clade>
264 <name>s__Rhodobacter_sphaeroides</name>
265 <branch_length>1.0</branch_length>
266 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
267 <clade>
268 <name>t__Rhodobacter_sphaeroides_unclassified</name>
269 <branch_length>1.0</branch_length>
270 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
271 </clade>
272 </clade>
273 </clade>
274 </clade>
275 </clade>
276 </clade>
277 <clade>
278 <name>c__Betaproteobacteria</name>
279 <branch_length>1.0</branch_length>
280 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
281 <clade>
282 <name>o__Neisseriales</name>
283 <branch_length>1.0</branch_length>
284 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
285 <clade>
286 <name>f__Neisseriaceae</name>
287 <branch_length>1.0</branch_length>
288 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
289 <clade>
290 <name>g__Neisseria</name>
291 <branch_length>1.0</branch_length>
292 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
293 <clade>
294 <name>s__Neisseria_meningitidis</name>
295 <branch_length>1.0</branch_length>
296 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
297 <clade>
298 <name>t__Neisseria_meningitidis_unclassified</name>
299 <branch_length>1.0</branch_length>
300 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
301 </clade>
302 </clade>
303 </clade>
304 </clade>
305 </clade>
306 </clade>
307 <clade>
308 <name>c__Epsilonproteobacteria</name>
309 <branch_length>1.0</branch_length>
310 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
311 <clade>
312 <name>o__Campylobacterales</name>
313 <branch_length>1.0</branch_length>
314 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
315 <clade>
316 <name>f__Helicobacteraceae</name>
317 <branch_length>1.0</branch_length>
318 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
319 <clade>
320 <name>g__Helicobacter</name>
321 <branch_length>1.0</branch_length>
322 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
323 <clade>
324 <name>s__Helicobacter_pylori</name>
325 <branch_length>1.0</branch_length>
326 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
327 <clade>
328 <name>t__Helicobacter_pylori_unclassified</name>
329 <branch_length>1.0</branch_length>
330 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
331 </clade>
332 </clade>
333 </clade>
334 </clade>
335 </clade>
336 </clade>
337 <clade>
248 <name>c__Gammaproteobacteria</name> 338 <name>c__Gammaproteobacteria</name>
249 <branch_length>1.0</branch_length> 339 <branch_length>1.0</branch_length>
250 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">85.4517057547</property> 340 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">85.4517057547</property>
251 <clade> 341 <clade>
252 <name>o__Enterobacteriales</name> 342 <name>o__Enterobacteriales</name>
309 <clade> 399 <clade>
310 <name>g__Pseudomonas</name> 400 <name>g__Pseudomonas</name>
311 <branch_length>1.0</branch_length> 401 <branch_length>1.0</branch_length>
312 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">33.3271759768</property> 402 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">33.3271759768</property>
313 <clade> 403 <clade>
404 <name>s__Pseudomonas_aeruginosa</name>
405 <branch_length>1.0</branch_length>
406 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property>
407 <clade>
408 <name>t__Pseudomonas_aeruginosa_unclassified</name>
409 <branch_length>1.0</branch_length>
410 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property>
411 </clade>
412 </clade>
413 <clade>
314 <name>s__Pseudomonas_unclassified</name> 414 <name>s__Pseudomonas_unclassified</name>
315 <branch_length>1.0</branch_length> 415 <branch_length>1.0</branch_length>
316 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">28.0078913105</property> 416 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">28.0078913105</property>
317 </clade>
318 <clade>
319 <name>s__Pseudomonas_aeruginosa</name>
320 <branch_length>1.0</branch_length>
321 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property>
322 <clade>
323 <name>t__Pseudomonas_aeruginosa_unclassified</name>
324 <branch_length>1.0</branch_length>
325 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property>
326 </clade>
327 </clade>
328 </clade>
329 </clade>
330 </clade>
331 </clade>
332 <clade>
333 <name>c__Alphaproteobacteria</name>
334 <branch_length>1.0</branch_length>
335 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
336 <clade>
337 <name>o__Rhodobacterales</name>
338 <branch_length>1.0</branch_length>
339 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
340 <clade>
341 <name>f__Rhodobacteraceae</name>
342 <branch_length>1.0</branch_length>
343 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
344 <clade>
345 <name>g__Rhodobacter</name>
346 <branch_length>1.0</branch_length>
347 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
348 <clade>
349 <name>s__Rhodobacter_sphaeroides</name>
350 <branch_length>1.0</branch_length>
351 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
352 <clade>
353 <name>t__Rhodobacter_sphaeroides_unclassified</name>
354 <branch_length>1.0</branch_length>
355 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property>
356 </clade>
357 </clade>
358 </clade>
359 </clade>
360 </clade>
361 </clade>
362 <clade>
363 <name>c__Betaproteobacteria</name>
364 <branch_length>1.0</branch_length>
365 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
366 <clade>
367 <name>o__Neisseriales</name>
368 <branch_length>1.0</branch_length>
369 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
370 <clade>
371 <name>f__Neisseriaceae</name>
372 <branch_length>1.0</branch_length>
373 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
374 <clade>
375 <name>g__Neisseria</name>
376 <branch_length>1.0</branch_length>
377 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
378 <clade>
379 <name>s__Neisseria_meningitidis</name>
380 <branch_length>1.0</branch_length>
381 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
382 <clade>
383 <name>t__Neisseria_meningitidis_unclassified</name>
384 <branch_length>1.0</branch_length>
385 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property>
386 </clade>
387 </clade>
388 </clade>
389 </clade>
390 </clade>
391 </clade>
392 <clade>
393 <name>c__Epsilonproteobacteria</name>
394 <branch_length>1.0</branch_length>
395 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
396 <clade>
397 <name>o__Campylobacterales</name>
398 <branch_length>1.0</branch_length>
399 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
400 <clade>
401 <name>f__Helicobacteraceae</name>
402 <branch_length>1.0</branch_length>
403 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
404 <clade>
405 <name>g__Helicobacter</name>
406 <branch_length>1.0</branch_length>
407 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
408 <clade>
409 <name>s__Helicobacter_pylori</name>
410 <branch_length>1.0</branch_length>
411 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
412 <clade>
413 <name>t__Helicobacter_pylori_unclassified</name>
414 <branch_length>1.0</branch_length>
415 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
416 </clade>
417 </clade> 417 </clade>
418 </clade> 418 </clade>
419 </clade> 419 </clade>
420 </clade> 420 </clade>
421 </clade> 421 </clade>
432 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property> 432 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property>
433 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property> 433 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property>
434 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property> 434 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property>
435 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property> 435 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property>
436 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property> 436 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property>
437 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_shape" ref="A:1">._._._.</property>
437 <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property> 438 <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property>
438 </phylogeny> 439 </phylogeny>
439 </phyloxml> 440 </phyloxml>