Mercurial > repos > iuc > hmmer_hmmscan
diff test-data/MADE1.out.tblout @ 0:216b19e6c317 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
| author | iuc |
|---|---|
| date | Sat, 25 Jun 2016 15:06:16 -0400 |
| parents | |
| children | 01219a31c48e |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/MADE1.out.tblout Sat Jun 25 15:06:16 2016 -0400 @@ -0,0 +1,14 @@ +# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- +# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target +#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- +MADE1 DF0000629.2 humanchr1/239220001-239550000 - 7.1e-18 51.5 28.5 2e-12 34.0 0.7 9.6 5 0 0 5 5 5 2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +# +# Program: hmmscan +# Version: 3.1b1 (May 2013) +# Pipeline mode: SCAN +# Query file: test-data/dna_target.fa +# Target file: test-data/MADE1.hmm +# Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa +# Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer +# Date: Tue Feb 10 14:40:35 2015 +# [ok]