diff test-data/nhmmer.out.tblout @ 5:b774ae8e1609 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:27:07 -0400
parents 6867ed975e25
children d753d9169482
line wrap: on
line diff
--- a/test-data/nhmmer.out.tblout	Mon Jun 11 15:51:39 2018 -0400
+++ b/test-data/nhmmer.out.tblout	Tue Jun 16 05:27:07 2020 -0400
@@ -1,17 +1,17 @@
 # target name                 accession  query name           accession   hmmfrom hmm to alifrom  ali to envfrom  env to  sq len strand   E-value  score  bias  description of target
 #         ------------------- ---------- --------------------  ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +     8.7e-11   39.2   7.4  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     6.4e-08   30.0   8.3  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      77  302466  302390  302466  302387  330000    -     9.3e-08   29.5   6.1  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     6.3e-06   23.7   7.0  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      72  304073  304104  304053  304109  330000    +         1.4    6.5   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +       4e-11   41.3   7.5  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     1.9e-08   32.8   8.3  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      78  302466  302389  302466  302387  330000    -     6.3e-08   31.0   6.7  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     4.9e-06   25.0   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      71  304073  304103  304053  304109  330000    +         2.2    6.9   7.2  -
 #
 # Program:         nhmmer
-# Version:         3.2 (June 2018)
+# Version:         3.3 (Nov 2019)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_36.dat
-# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_37.dat
-# Option settings: nhmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_39.dat --dfamtblout None --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_36.dat /tmp/tmpp4O0Ju/files/000/dataset_37.dat 
-# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/30/working
-# Date:            Fri Jun  8 12:18:56 2018
+# Query file:      /tmp/tmpqydies2m/files/c/4/e/dataset_c4e67f40-cb86-438e-8bc0-6020ada9fc86.dat
+# Target file:     /tmp/tmpqydies2m/files/a/1/b/dataset_a1b4364c-0e9a-4709-b4ef-ab7e5661d9e9.dat
+# Option settings: nhmmer --tblout /tmp/tmpqydies2m/files/b/d/d/dataset_bdd87d82-1ce1-4051-8d5f-f7251bf7fd18.dat --dfamtblout /tmp/tmpqydies2m/files/d/8/e/dataset_d8ee0d50-d171-4e8a-9c7d-1cbd4394296f.dat --aliscoresout /tmp/tmpqydies2m/files/5/1/3/dataset_5139892f-c507-40c4-b43d-f73023c634f4.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpqydies2m/files/c/4/e/dataset_c4e67f40-cb86-438e-8bc0-6020ada9fc86.dat /tmp/tmpqydies2m/files/a/1/b/dataset_a1b4364c-0e9a-4709-b4ef-ab7e5661d9e9.dat 
+# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/17/working
+# Date:            Thu May 14 18:54:51 2020
 # [ok]