annotate macros.xml @ 3:037c0b25c041 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 32d4c566afe55179531fdd106dc5a996cc09bbb1
author iuc
date Wed, 29 Mar 2023 19:59:38 +0000
parents 2cd76b089570
children 95bf7479d53c
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
2 <macros>
3
037c0b25c041 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 32d4c566afe55179531fdd106dc5a996cc09bbb1
iuc
parents: 2
diff changeset
3 <token name="@TOOL_VERSION@">3.6.1</token>
2
2cd76b089570 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 0966faf8782e9043772acfa32f4a4281687a19dd
iuc
parents: 1
diff changeset
4 <token name="@VERSION_SUFFIX@">0</token>
2cd76b089570 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 0966faf8782e9043772acfa32f4a4281687a19dd
iuc
parents: 1
diff changeset
5 <token name="@PROFILE@">22.01</token>
0
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
6 <xml name="edam_ontology">
3
037c0b25c041 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 32d4c566afe55179531fdd106dc5a996cc09bbb1
iuc
parents: 2
diff changeset
7 <xrefs>
037c0b25c041 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 32d4c566afe55179531fdd106dc5a996cc09bbb1
iuc
parents: 2
diff changeset
8 <xref type="bio.tools">humann</xref>
037c0b25c041 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 32d4c566afe55179531fdd106dc5a996cc09bbb1
iuc
parents: 2
diff changeset
9 </xrefs>
0
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
10 </xml>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
11 <xml name="requirements">
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
12 <requirements>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
13 <requirement type="package" version="@TOOL_VERSION@">humann</requirement>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
14 <yield/>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
15 </requirements>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
16 </xml>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
17 <xml name="version">
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
18 <version_command>humann --version</version_command>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
19 </xml>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
20 <token name="@HELP_HEADER@">
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
21 What it does
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
22 ============
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
23
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
24 HUMAnN is a pipeline for efficiently and accuretly profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data.
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
25
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
26 Read more about the tool: http://huttenhower.sph.harvard.edu/humann
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
27 </token>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
28 <xml name="citations">
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
29 <citations>
2
2cd76b089570 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 0966faf8782e9043772acfa32f4a4281687a19dd
iuc
parents: 1
diff changeset
30 <citation type="doi">10.7554/eLife.65088</citation>
0
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
31 <citation type="doi">10.1371/journal.pcbi.1002358</citation>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
32 </citations>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
33 </xml>
65c80ca30373 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 077b8f34e081e6c427acb0fde0fbb97d1b241e0b"
iuc
parents:
diff changeset
34 </macros>