Mercurial > repos > iuc > humann2_regroup_table

comparison test-data/joined_pathway_coverage_abundance.tsv @ 0:a1747df2bc21 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
author iuc
date Mon, 13 Mar 2017 12:38:02 -0400
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-1:000000000000 0:a1747df2bc21
1 # Pathway demo_Abundance demo_Coverage
2 COA-PWY-1: coenzyme A biosynthesis II (mammalian) 6.3694267516 0.7609346153
3 COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus 4.7961630695 0.8557878872
4 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 10.6471569863 0.9392767343
5 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 8.9740635174 0.5431316496
6 PWY-2942: L-lysine biosynthesis III 2.5305778153 0.2651956314
7 PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei 1.7857142857 0.4389950257
8 PWY-5097: L-lysine biosynthesis VI 2.6664127226 0.2856160532
9 PWY-5423: oleoresin monoterpene volatiles biosynthesis 13.7815543238 0.9874950891
10 PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified 13.7815543238 0.8805252394
11 PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation 2.8720157961 0.3368670323
12 PWY-6305: putrescine biosynthesis IV 12.3568523173 0.9518375285
13 PWY-6305: putrescine biosynthesis IV|unclassified 12.3568523173 0.7234100116
14 PWY-6700: queuosine biosynthesis 5.5726434156 0.6918160989
15 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei 3.4037771853 0.7183078347
16 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 1.4512868417 0.3826190602
17 PWY-7111: pyruvate fermentation to isobutanol (engineered) 3.1668118122 0.3826032161
18 PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572
19 PWY-7219: adenosine ribonucleotides de novo biosynthesis 2.4290890774 0.2181895299
20 PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei 1.2474418751 0.3040136356
21 PWY490-3: nitrate reduction VI (assimilatory) 10.9962495261 0.9568614047
22 PWY490-3: nitrate reduction VI (assimilatory)|unclassified 10.9962495261 0.7290147297
23 UNINTEGRATED 6378.3363291102 1.0000000000
24 UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei 1957.0469180460 1.0000000000
25 UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus 2909.3950875399 1.0000000000
26 UNINTEGRATED|unclassified 46.5907339353 1.0000000000
27 UNMAPPED 1548.1865983490 1.0000000000
28 VALSYN-PWY: L-valine biosynthesis 3.1668118122 0.3826032161
29 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572