Mercurial > repos > iuc > humann2_regroup_table
diff test-data/joined_pathway_coverage_abundance.tsv @ 0:a1747df2bc21 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
| author | iuc |
|---|---|
| date | Mon, 13 Mar 2017 12:38:02 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/joined_pathway_coverage_abundance.tsv Mon Mar 13 12:38:02 2017 -0400 @@ -0,0 +1,29 @@ +# Pathway demo_Abundance demo_Coverage +COA-PWY-1: coenzyme A biosynthesis II (mammalian) 6.3694267516 0.7609346153 +COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus 4.7961630695 0.8557878872 +PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 10.6471569863 0.9392767343 +PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 8.9740635174 0.5431316496 +PWY-2942: L-lysine biosynthesis III 2.5305778153 0.2651956314 +PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei 1.7857142857 0.4389950257 +PWY-5097: L-lysine biosynthesis VI 2.6664127226 0.2856160532 +PWY-5423: oleoresin monoterpene volatiles biosynthesis 13.7815543238 0.9874950891 +PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified 13.7815543238 0.8805252394 +PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation 2.8720157961 0.3368670323 +PWY-6305: putrescine biosynthesis IV 12.3568523173 0.9518375285 +PWY-6305: putrescine biosynthesis IV|unclassified 12.3568523173 0.7234100116 +PWY-6700: queuosine biosynthesis 5.5726434156 0.6918160989 +PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei 3.4037771853 0.7183078347 +PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 1.4512868417 0.3826190602 +PWY-7111: pyruvate fermentation to isobutanol (engineered) 3.1668118122 0.3826032161 +PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572 +PWY-7219: adenosine ribonucleotides de novo biosynthesis 2.4290890774 0.2181895299 +PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei 1.2474418751 0.3040136356 +PWY490-3: nitrate reduction VI (assimilatory) 10.9962495261 0.9568614047 +PWY490-3: nitrate reduction VI (assimilatory)|unclassified 10.9962495261 0.7290147297 +UNINTEGRATED 6378.3363291102 1.0000000000 +UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei 1957.0469180460 1.0000000000 +UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus 2909.3950875399 1.0000000000 +UNINTEGRATED|unclassified 46.5907339353 1.0000000000 +UNMAPPED 1548.1865983490 1.0000000000 +VALSYN-PWY: L-valine biosynthesis 3.1668118122 0.3826032161 +VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572