Mercurial > repos > iuc > integron_finder
diff test-data/test10_integrons_table.tsv @ 2:392f100eebcd draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/integron_finder commit bf94533e76d4253a734333e33c2f14f6634f0e79
| author | iuc |
|---|---|
| date | Sun, 25 Feb 2024 16:08:08 +0000 |
| parents | 1ae00120dd24 |
| children | bfd290fe1588 |
line wrap: on
line diff
--- a/test-data/test10_integrons_table.tsv Fri Feb 17 18:36:09 2023 +0000 +++ b/test-data/test10_integrons_table.tsv Sun Feb 25 16:08:08 2024 +0000 @@ -1,9 +1,9 @@ -# cmd: integron_finder /tmp/tmp3_ir6t5a/files/c/d/d/dataset_cdd097ee-d7c0-4424-9c3c-3ddd5d20887a.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 --union-integrases --func-annot +# cmd: integron_finder /tmp/tmpx8hgxvv4/files/b/e/e/dataset_bee350c4-08fc-401b-b91f-5769817c474a.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 --union-integrases --func-annot ID_integron ID_replicon element pos_beg pos_end strand evalue type_elt annotation model type default distance_2attC considered_topology -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9000000000000001e-25 protein intI intersection_tyr_intI complete Yes NA circ -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_20 17375 17722 -1 9.799999999999998e-65 protein SMR_qac_E-NCBIFAM NF000276.2 complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9e-25 protein intI intersection_tyr_intI complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_20 17375 17722 -1 9.800000000000001e-65 protein SMR_qac_E-NCBIFAM NF000276.2 complete Yes NA circ integron_01 ACBA.007.P01_13 attc_001 17825 17884 -1 1e-09 attC attC attc_4 complete Yes NA circ -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_21 17886 18665 -1 2.7999999999999994e-183 protein ANT_3pp_AadA1-NCBIFAM NF033126.1 complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_21 17886 18665 -1 2.8e-183 protein ANT_3pp_AadA1-NCBIFAM NF033126.1 complete Yes NA circ integron_01 ACBA.007.P01_13 attc_002 19080 19149 -1 0.0001 attC attC attc_4 complete Yes 1196.0 circ integron_01 ACBA.007.P01_13 ACBA.007.P01_13_22 19090 19749 -1 NA protein protein NA complete Yes NA circ integron_01 ACBA.007.P01_13 attc_003 19618 19726 -1 1.1e-07 attC attC attc_4 complete Yes 469.0 circ