Mercurial > repos > iuc > isoformswitchanalyzer
view test-data/pfam_results.txt @ 6:298d81e5e138 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 4b95b96461684de086fe7e8086af9385f3ed7930
| author | iuc |
|---|---|
| date | Wed, 20 Dec 2023 18:03:04 +0000 |
| parents | f3fefb6d8254 |
| children |
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# pfam_scan.pl, run at Mon Feb 4 16:16:14 2019 # # Copyright (c) 2009 Genome Research Ltd # Freely distributed under the GNU # General Public License # # Authors: Jaina Mistry (jm14@sanger.ac.uk), John Tate (jt6@sanger.ac.uk), # Rob Finn (rdf@sanger.ac.uk) # # This is free software; you can redistribute it and/or modify it under # the terms of the GNU General Public License as published by the Free Software # Foundation; either version 2 of the License, or (at your option) any later version. # This program is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS # FOR A PARTICULAR PURPOSE. See the GNU General Public License for more # details. # # You should have received a copy of the GNU General Public License along with # this program. If not, see <http://www.gnu.org/licenses/>. # = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = # query sequence file: 01_intermediary_test_data_AA.fasta # cpu number specified: 20 # searching against: /aura-internal/software/PfamScan/datafiles//Pfam-A.hmm, with cut off --cut_ga # resolve clan overlaps: on # predict active sites: on # = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = # # <seq id> <alignment start> <alignment end> <envelope start> <envelope end> <hmm acc> <hmm name> <type> <hmm start> <hmm end> <hmm length> <bit score> <E-value> <significance> <clan> <predicted_active_site_residues> TCONS_00000045 227 714 227 714 PF00858.19 ASC Family 1 439 439 277.4 1.7e-82 1 No_clan TCONS_00000046 63 550 63 550 PF00858.19 ASC Family 1 439 439 278.4 8.4e-83 1 No_clan TCONS_00000047 63 550 63 550 PF00858.19 ASC Family 1 439 439 278.4 8.4e-83 1 No_clan TCONS_00000048 129 616 129 616 PF00858.19 ASC Family 1 439 439 277.9 1.2e-82 1 No_clan TCONS_00000049 92 339 89 339 PF00858.19 ASC Family 199 439 439 182.9 8e-54 1 No_clan TCONS_00000066 24 94 20 102 PF12037.3 DUF3523 Family 4 73 276 64.5 7.2e-18 1 No_clan TCONS_00000066 141 334 131 334 PF12037.3 DUF3523 Family 72 276 276 241.7 7e-72 1 No_clan TCONS_00000066 396 522 396 523 PF00004.24 AAA Family 1 131 132 70.7 1.3e-19 1 CL0023 TCONS_00000067 24 286 20 286 PF12037.3 DUF3523 Family 4 276 276 326.1 1.2e-97 1 No_clan TCONS_00000067 348 474 348 475 PF00004.24 AAA Family 1 131 132 70.8 1.1e-19 1 CL0023 TCONS_00000068 1 207 1 207 PF12037.3 DUF3523 Family 59 276 276 251.4 7.7e-75 1 No_clan TCONS_00000068 269 395 269 396 PF00004.24 AAA Family 1 131 132 71.2 8.8e-20 1 CL0023 TCONS_00000173 25 63 25 63 PF00097.20 zf-C3HC4 Domain 1 41 41 23.9 2.3e-05 1 CL0229 TCONS_00000174 25 63 25 63 PF00097.20 zf-C3HC4 Domain 1 41 41 22.1 8.4e-05 1 CL0229 TCONS_00000174 95 144 93 145 PF00643.19 zf-B_box Domain 3 41 42 35.4 7.1e-09 1 No_clan TCONS_00000190 3 86 3 88 PF05485.7 THAP Domain 1 83 85 71.5 4.6e-20 1 No_clan TCONS_00000191 3 86 3 88 PF05485.7 THAP Domain 1 83 85 71.5 4.6e-20 1 No_clan TCONS_00000192 3 86 3 88 PF05485.7 THAP Domain 1 83 85 72.5 2.3e-20 1 No_clan TCONS_00000219 46 171 46 171 PF09779.4 Ima1_N Family 1 131 131 134.7 2.5e-39 1 No_clan TCONS_00000219 192 391 191 392 PF10476.4 DUF2448 Family 2 203 204 285.0 2.7e-85 1 No_clan TCONS_00000220 46 171 46 171 PF09779.4 Ima1_N Family 1 131 131 133.5 6.1e-39 1 No_clan TCONS_00000220 192 388 191 392 PF10476.4 DUF2448 Family 2 200 204 280.1 8.5e-84 1 No_clan TCONS_00000221 31 108 31 108 PF02192.11 PI3K_p85B Family 1 78 78 112.5 4.5e-33 1 No_clan TCONS_00000221 176 281 175 281 PF00794.13 PI3K_rbd Family 2 107 107 105.5 1.2e-30 1 CL0072 TCONS_00000221 338 466 337 472 PF00792.19 PI3K_C2 Domain 2 136 143 120.0 6.1e-35 1 CL0154 TCONS_00000221 502 682 499 684 PF00613.15 PI3Ka Family 4 183 185 184.5 1e-54 1 CL0020 TCONS_00000221 775 989 773 991 PF00454.22 PI3_PI4_kinase Family 3 233 235 194.7 1.6e-57 1 No_clan TCONS_00000222 31 108 31 108 PF02192.11 PI3K_p85B Family 1 78 78 112.5 4.4e-33 1 No_clan TCONS_00000222 176 281 175 281 PF00794.13 PI3K_rbd Family 2 107 107 105.5 1.2e-30 1 CL0072 TCONS_00000222 338 466 337 472 PF00792.19 PI3K_C2 Domain 2 136 143 120.0 6.1e-35 1 CL0154 TCONS_00000222 506 681 500 683 PF00613.15 PI3Ka Family 9 183 185 182.4 4.5e-54 1 CL0020 TCONS_00000222 774 988 772 990 PF00454.22 PI3_PI4_kinase Family 3 233 235 194.7 1.6e-57 1 No_clan TCONS_00000223 31 108 31 108 PF02192.11 PI3K_p85B Family 1 78 78 112.4 4.6e-33 1 No_clan TCONS_00000223 176 261 175 265 PF00794.13 PI3K_rbd Family 2 87 107 75.7 2.2e-21 1 CL0072 TCONS_00000223 303 431 302 437 PF00792.19 PI3K_C2 Domain 2 136 143 120.0 6.3e-35 1 CL0154 TCONS_00000223 526 706 523 708 PF00613.15 PI3Ka Family 4 183 185 184.4 1.1e-54 1 CL0020 TCONS_00000223 799 1013 797 1015 PF00454.22 PI3_PI4_kinase Family 3 233 235 194.6 1.6e-57 1 No_clan TCONS_00000234 11 348 11 348 PF00225.18 Kinesin Domain 1 335 335 390.9 3.3e-117 1 CL0023 TCONS_00000234 512 581 510 581 PF00498.21 FHA Family 3 68 68 31.3 1.6e-07 1 CL0357 TCONS_00000235 11 348 11 348 PF00225.18 Kinesin Domain 1 335 335 389.8 6.9e-117 1 CL0023 TCONS_00000235 512 581 510 581 PF00498.21 FHA Family 3 68 68 30.5 2.7e-07 1 CL0357 TCONS_00000235 799 846 799 846 PF12423.3 KIF1B Family 1 45 45 42.1 6e-11 1 No_clan TCONS_00000235 1220 1367 1220 1368 PF12473.3 DUF3694 Family 1 139 140 148.7 7.6e-44 1 No_clan TCONS_00000235 1657 1750 1656 1753 PF00169.24 PH Domain 2 101 104 50.3 2.2e-13 1 CL0266 TCONS_00000236 11 354 11 354 PF00225.18 Kinesin Domain 1 335 335 388.0 2.4e-116 1 CL0023 TCONS_00000236 558 627 556 627 PF00498.21 FHA Family 3 68 68 30.5 2.8e-07 1 CL0357 TCONS_00000236 845 892 845 892 PF12423.3 KIF1B Family 1 45 45 42.1 6.2e-11 1 No_clan TCONS_00000236 1266 1413 1266 1414 PF12473.3 DUF3694 Family 1 139 140 148.7 7.8e-44 1 No_clan TCONS_00000236 1703 1796 1702 1799 PF00169.24 PH Domain 2 101 104 50.2 2.2e-13 1 CL0266 TCONS_00000237 11 354 11 354 PF00225.18 Kinesin Domain 1 335 335 388.1 2.4e-116 1 CL0023 TCONS_00000237 532 601 530 601 PF00498.21 FHA Family 3 68 68 30.5 2.8e-07 1 CL0357 TCONS_00000237 819 866 819 866 PF12423.3 KIF1B Family 1 45 45 42.1 6.1e-11 1 No_clan TCONS_00000237 1240 1387 1240 1388 PF12473.3 DUF3694 Family 1 139 140 148.7 7.7e-44 1 No_clan TCONS_00000237 1677 1770 1676 1773 PF00169.24 PH Domain 2 101 104 50.2 2.2e-13 1 CL0266 TCONS_00000240 11 354 11 354 PF00225.18 Kinesin Domain 1 335 335 388.1 2.4e-116 1 CL0023 TCONS_00000240 544 613 542 613 PF00498.21 FHA Family 3 68 68 30.5 2.8e-07 1 CL0357 TCONS_00000240 831 878 831 878 PF12423.3 KIF1B Family 1 45 45 42.1 6.2e-11 1 No_clan TCONS_00000240 1252 1399 1252 1400 PF12473.3 DUF3694 Family 1 139 140 148.7 7.8e-44 1 No_clan TCONS_00000240 1689 1782 1688 1785 PF00169.24 PH Domain 2 101 104 50.2 2.2e-13 1 CL0266 TCONS_00000245 17 92 17 92 PF15630.1 CENP-S Family 1 76 76 116.4 4.5e-34 1 CL0012 TCONS_00000246 17 92 17 92 PF15630.1 CENP-S Family 1 76 76 115.8 6.9e-34 1 CL0012 TCONS_00000246 147 163 146 163 PF03002.10 Somatostatin Family 2 18 18 33.4 2.2e-08 1 No_clan TCONS_00000298 99 258 99 259 PF00350.18 Dynamin_N Family 1 167 168 82.8 2.3e-23 1 CL0023 TCONS_00000298 586 755 586 756 PF04799.8 Fzo_mitofusin Family 1 170 171 275.8 8.5e-83 1 No_clan TCONS_00000299 99 258 99 259 PF00350.18 Dynamin_N Family 1 167 168 82.8 2.3e-23 1 CL0023 TCONS_00000299 586 755 586 756 PF04799.8 Fzo_mitofusin Family 1 170 171 275.8 8.5e-83 1 No_clan TCONS_00000339 93 141 60 141 PF00856.23 SET Family 113 162 162 29.6 7.3e-07 1 No_clan TCONS_00000340 93 141 41 141 PF00856.23 SET Family 113 162 162 25.7 1.1e-05 1 No_clan TCONS_00000340 360 382 360 383 PF13894.1 zf-C2H2_4 Domain 1 23 24 16.9 0.0057 1 CL0361 TCONS_00000340 390 412 390 412 PF00096.21 zf-C2H2 Domain 1 23 23 17.5 0.0036 1 CL0361 TCONS_00000340 483 506 483 506 PF13894.1 zf-C2H2_4 Domain 1 24 24 17.7 0.003 1 CL0361 TCONS_00000340 1134 1156 1134 1157 PF13894.1 zf-C2H2_4 Domain 1 23 24 10.0 0.9 1 CL0361 TCONS_00000340 1191 1214 1191 1214 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.8 1 1 CL0361 TCONS_00000340 1455 1473 1455 1475 PF13894.1 zf-C2H2_4 Domain 1 19 24 13.5 0.068 1 CL0361 TCONS_00000341 93 141 41 141 PF00856.23 SET Family 113 162 162 25.7 1.2e-05 1 No_clan TCONS_00000341 360 382 360 383 PF13894.1 zf-C2H2_4 Domain 1 23 24 16.8 0.0058 1 CL0361 TCONS_00000341 390 412 390 412 PF00096.21 zf-C2H2 Domain 1 23 23 17.5 0.0037 1 CL0361 TCONS_00000341 483 506 483 506 PF13894.1 zf-C2H2_4 Domain 1 24 24 17.7 0.0031 1 CL0361 TCONS_00000341 1134 1156 1134 1157 PF13894.1 zf-C2H2_4 Domain 1 23 24 9.9 0.92 1 CL0361 TCONS_00000341 1191 1214 1191 1214 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.7 1.1 1 CL0361 TCONS_00000341 1455 1473 1455 1475 PF13894.1 zf-C2H2_4 Domain 1 19 24 13.4 0.07 1 CL0361 TCONS_00000342 9 56 2 56 PF00856.23 SET Family 114 162 162 31.0 2.7e-07 1 No_clan TCONS_00000343 117 139 117 140 PF13894.1 zf-C2H2_4 Domain 1 23 24 18.5 0.0018 1 CL0361 TCONS_00000343 147 169 147 169 PF00096.21 zf-C2H2 Domain 1 23 23 19.1 0.0011 1 CL0361 TCONS_00000343 240 263 240 263 PF13894.1 zf-C2H2_4 Domain 1 24 24 19.3 0.00093 1 CL0361 TCONS_00000344 159 181 159 182 PF13894.1 zf-C2H2_4 Domain 1 23 24 17.1 0.0049 1 CL0361 TCONS_00000344 189 211 189 211 PF00096.21 zf-C2H2 Domain 1 23 23 17.7 0.0031 1 CL0361 TCONS_00000344 282 305 282 305 PF13894.1 zf-C2H2_4 Domain 1 24 24 17.9 0.0026 1 CL0361 TCONS_00000344 933 955 933 956 PF13894.1 zf-C2H2_4 Domain 1 23 24 10.2 0.78 1 CL0361 TCONS_00000344 990 1013 990 1013 PF13894.1 zf-C2H2_4 Domain 1 24 24 10.0 0.91 1 CL0361 TCONS_00000344 1254 1272 1254 1274 PF13894.1 zf-C2H2_4 Domain 1 19 24 13.7 0.059 1 CL0361 TCONS_00000356 6 240 6 240 PF15345.1 TMEM51 Family 1 233 233 339.3 1.2e-101 1 No_clan TCONS_00000357 6 240 6 240 PF15345.1 TMEM51 Family 1 233 233 339.3 1.2e-101 1 No_clan TCONS_00000358 6 120 6 132 PF15345.1 TMEM51 Family 1 113 233 163.8 4.8e-48 1 No_clan TCONS_00000359 6 240 6 240 PF15345.1 TMEM51 Family 1 233 233 339.3 1.2e-101 1 No_clan TCONS_00000360 6 240 6 240 PF15345.1 TMEM51 Family 1 233 233 339.3 1.2e-101 1 No_clan TCONS_00000411 2 40 1 44 PF00024.21 PAN_1 Domain 37 77 79 29.3 4.9e-07 1 CL0168 TCONS_00000412 2 40 1 43 PF00024.21 PAN_1 Domain 37 77 79 28.2 1.1e-06 1 CL0168 TCONS_00000412 47 81 47 91 PF00051.13 Kringle Domain 1 35 79 33.7 2.8e-08 1 No_clan TCONS_00000412 112 149 89 149 PF00051.13 Kringle Domain 43 79 79 48.9 4.9e-13 1 No_clan TCONS_00000413 6 42 2 42 PF00051.13 Kringle Domain 44 79 79 47.5 1.3e-12 1 No_clan TCONS_00000413 47 82 47 92 PF00051.13 Kringle Domain 1 37 79 38.2 1.1e-09 1 No_clan TCONS_00000415 2 40 1 43 PF00024.21 PAN_1 Domain 37 77 79 26.9 2.8e-06 1 CL0168 TCONS_00000415 47 81 47 93 PF00051.13 Kringle Domain 1 35 79 32.6 6.3e-08 1 No_clan TCONS_00000415 112 149 87 149 PF00051.13 Kringle Domain 43 79 79 47.6 1.3e-12 1 No_clan TCONS_00000415 154 231 154 231 PF00051.13 Kringle Domain 1 79 79 101.3 2.1e-29 1 No_clan TCONS_00000415 246 287 246 288 PF00051.13 Kringle Domain 1 43 79 41.3 1.2e-10 1 No_clan TCONS_00000417 41 68 2 68 PF00051.13 Kringle Domain 53 79 79 30.6 2.6e-07 1 No_clan TCONS_00000418 67 169 62 170 PF00089.21 Trypsin Domain 9 111 220 71.8 5.8e-20 1 CL0124 TCONS_00000493 173 205 171 213 PF00057.13 Ldl_recept_a Repeat 3 34 37 30.2 2.8e-07 1 No_clan TCONS_00000507 18 114 14 116 PF00651.26 BTB Domain 5 108 111 73.9 9.1e-21 1 CL0033 TCONS_00000507 809 830 807 830 PF13894.1 zf-C2H2_4 Domain 3 24 24 12.1 0.18 1 CL0361 TCONS_00000507 851 874 850 875 PF13465.1 zf-H2C2_2 Domain 2 25 26 24.1 2.9e-05 1 CL0361 TCONS_00000507 908 931 907 932 PF13465.1 zf-H2C2_2 Domain 2 25 26 31.7 1.1e-07 1 CL0361 TCONS_00000507 950 973 950 973 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.4 1.4 1 CL0361 TCONS_00000507 978 1000 978 1000 PF00096.21 zf-C2H2 Domain 1 23 23 23.6 4.1e-05 1 CL0361 TCONS_00000507 1006 1029 1006 1029 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.1 1.7 1 CL0361 TCONS_00000507 1047 1069 1046 1069 PF13894.1 zf-C2H2_4 Domain 2 24 24 11.9 0.21 1 CL0361 TCONS_00000507 1135 1158 1135 1158 PF13894.1 zf-C2H2_4 Domain 1 24 24 16.9 0.0055 1 CL0361 TCONS_00000508 18 114 14 116 PF00651.26 BTB Domain 5 108 111 73.9 9.1e-21 1 CL0033 TCONS_00000508 809 830 807 830 PF13894.1 zf-C2H2_4 Domain 3 24 24 12.1 0.18 1 CL0361 TCONS_00000508 851 874 850 875 PF13465.1 zf-H2C2_2 Domain 2 25 26 24.1 2.9e-05 1 CL0361 TCONS_00000508 908 931 907 932 PF13465.1 zf-H2C2_2 Domain 2 25 26 31.7 1.1e-07 1 CL0361 TCONS_00000508 950 973 950 973 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.4 1.4 1 CL0361 TCONS_00000508 978 1000 978 1000 PF00096.21 zf-C2H2 Domain 1 23 23 23.6 4.1e-05 1 CL0361 TCONS_00000508 1006 1029 1006 1029 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.1 1.7 1 CL0361 TCONS_00000508 1047 1069 1046 1069 PF13894.1 zf-C2H2_4 Domain 2 24 24 11.9 0.21 1 CL0361 TCONS_00000508 1135 1158 1135 1158 PF13894.1 zf-C2H2_4 Domain 1 24 24 16.9 0.0055 1 CL0361 TCONS_00000509 18 114 14 116 PF00651.26 BTB Domain 5 108 111 74.1 8e-21 1 CL0033 TCONS_00000509 697 718 695 718 PF13894.1 zf-C2H2_4 Domain 3 24 24 12.3 0.16 1 CL0361 TCONS_00000509 739 762 738 763 PF13465.1 zf-H2C2_2 Domain 2 25 26 24.2 2.6e-05 1 CL0361 TCONS_00000509 796 819 795 820 PF13465.1 zf-H2C2_2 Domain 2 25 26 31.9 9.9e-08 1 CL0361 TCONS_00000509 838 861 838 861 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.5 1.3 1 CL0361 TCONS_00000509 866 888 866 888 PF00096.21 zf-C2H2 Domain 1 23 23 23.8 3.7e-05 1 CL0361 TCONS_00000509 894 917 894 917 PF13894.1 zf-C2H2_4 Domain 1 24 24 9.3 1.5 1 CL0361 TCONS_00000509 935 957 934 957 PF13894.1 zf-C2H2_4 Domain 2 24 24 12.1 0.19 1 CL0361 TCONS_00000509 1023 1046 1023 1046 PF13894.1 zf-C2H2_4 Domain 1 24 24 17.0 0.0049 1 CL0361 TCONS_00000558 45 116 45 118 PF01480.12 PWI Family 1 75 77 104.0 3.2e-30 1 No_clan TCONS_00000559 45 116 45 118 PF01480.12 PWI Family 1 75 77 104.0 3.3e-30 1 No_clan TCONS_00000560 6 77 6 79 PF01480.12 PWI Family 1 75 77 104.4 2.3e-30 1 No_clan TCONS_00000561 2 33 1 35 PF01480.12 PWI Family 45 75 77 36.0 5.3e-09 1 No_clan TCONS_00003866 103 163 97 166 PF13499.1 EF-hand_7 Domain 2 63 66 35.6 7.4e-09 1 CL0220 TCONS_00003866 287 305 283 307 PF13202.1 EF-hand_5 Domain 6 23 25 13.2 0.04 1 CL0220 TCONS_00003867 103 163 97 166 PF13499.1 EF-hand_7 Domain 2 63 66 35.7 7e-09 1 CL0220 TCONS_00003867 287 305 283 306 PF13202.1 EF-hand_5 Domain 6 23 25 13.6 0.031 1 CL0220 TCONS_00003869 103 163 93 166 PF13499.1 EF-hand_7 Domain 2 63 66 36.5 3.9e-09 1 CL0220 TCONS_00003880 1 92 1 93 PF00169.24 PH Domain 3 103 104 46.7 2.9e-12 1 CL0266 TCONS_00003880 134 250 133 251 PF01412.13 ArfGap Domain 2 116 117 140.2 2.3e-41 1 No_clan TCONS_00003880 403 494 402 496 PF12796.2 Ank_2 Family 2 87 89 57.3 1.4e-15 1 CL0465 TCONS_00003881 227 320 227 321 PF00169.24 PH Domain 1 103 104 48.5 7.9e-13 1 CL0266 TCONS_00003881 362 478 361 479 PF01412.13 ArfGap Domain 2 116 117 139.6 3.6e-41 1 No_clan TCONS_00003881 598 689 597 691 PF12796.2 Ank_2 Family 2 87 89 56.7 2.2e-15 1 CL0465 TCONS_00003882 269 362 269 363 PF00169.24 PH Domain 1 103 104 48.3 9e-13 1 CL0266 TCONS_00003882 404 520 403 521 PF01412.13 ArfGap Domain 2 116 117 139.4 4.1e-41 1 No_clan TCONS_00003882 673 764 672 766 PF12796.2 Ank_2 Family 2 87 89 56.5 2.6e-15 1 CL0465 TCONS_00003901 38 145 33 156 PF07686.12 V-set Domain 6 103 114 29.4 5.8e-07 1 CL0011 TCONS_00003901 171 277 161 291 PF07686.12 V-set Domain 8 101 114 40.7 1.7e-10 1 CL0011 TCONS_00003902 38 145 33 156 PF07686.12 V-set Domain 6 103 114 29.4 5.6e-07 1 CL0011 TCONS_00003902 171 277 161 291 PF07686.12 V-set Domain 8 101 114 40.7 1.7e-10 1 CL0011 TCONS_00003903 70 176 59 190 PF07686.12 V-set Domain 8 101 114 41.5 1e-10 1 CL0011 TCONS_00003904 38 145 33 156 PF07686.12 V-set Domain 6 103 114 29.4 5.6e-07 1 CL0011 TCONS_00003904 171 277 161 291 PF07686.12 V-set Domain 8 101 114 40.7 1.7e-10 1 CL0011 TCONS_00003905 29 136 24 147 PF07686.12 V-set Domain 6 103 114 29.5 5.4e-07 1 CL0011 TCONS_00003905 162 268 152 282 PF07686.12 V-set Domain 8 101 114 40.8 1.6e-10 1 CL0011 TCONS_00003911 5 66 1 90 PF02984.14 Cyclin_C Domain 32 93 118 24.0 2.7e-05 1 CL0065 TCONS_00003912 5 66 1 90 PF02984.14 Cyclin_C Domain 32 93 118 24.0 2.7e-05 1 CL0065 TCONS_00003913 72 191 54 192 PF00134.18 Cyclin_N Domain 25 126 127 38.3 7.9e-10 1 CL0065 TCONS_00003914 72 191 55 192 PF00134.18 Cyclin_N Domain 25 126 127 35.8 5e-09 1 CL0065 TCONS_00003914 215 288 195 312 PF02984.14 Cyclin_C Domain 20 93 118 25.1 1.3e-05 1 CL0065 TCONS_00003915 5 66 1 90 PF02984.14 Cyclin_C Domain 32 93 118 24.0 2.7e-05 1 CL0065 TCONS_00003916 5 66 1 90 PF02984.14 Cyclin_C Domain 32 93 118 24.0 2.7e-05 1 CL0065 TCONS_00003921 45 102 31 104 PF12796.2 Ank_2 Family 30 87 89 40.5 2.5e-10 1 CL0465 TCONS_00003921 103 162 100 170 PF12796.2 Ank_2 Family 23 81 89 45.3 8e-12 1 CL0465 TCONS_00003921 182 266 181 266 PF12796.2 Ank_2 Family 2 89 89 51.5 9.5e-14 1 CL0465 TCONS_00003921 273 364 273 365 PF12796.2 Ank_2 Family 1 88 89 77.3 8.1e-22 1 CL0465 TCONS_00003937 116 193 83 198 PF00892.15 EamA Family 27 104 126 22.5 8.8e-05 1 CL0184 TCONS_00003939 116 212 83 215 PF00892.15 EamA Family 27 123 126 23.2 5.3e-05 1 CL0184 TCONS_00003939 224 368 224 369 PF03151.11 TPT Family 1 152 153 115.0 2.2e-33 1 CL0184 TCONS_00003940 116 212 83 215 PF00892.15 EamA Family 27 123 126 23.2 5.3e-05 1 CL0184 TCONS_00003940 224 368 224 369 PF03151.11 TPT Family 1 152 153 115.0 2.2e-33 1 CL0184 TCONS_00003941 116 212 83 215 PF00892.15 EamA Family 27 123 126 23.2 5.3e-05 1 CL0184 TCONS_00003941 224 368 224 369 PF03151.11 TPT Family 1 152 153 115.0 2.2e-33 1 CL0184 TCONS_00003942 116 212 103 215 PF00892.15 EamA Family 27 123 126 28.0 1.8e-06 1 CL0184 TCONS_00003943 116 212 89 215 PF00892.15 EamA Family 27 123 126 26.4 5.4e-06 1 CL0184 TCONS_00003959 116 193 83 198 PF00892.15 EamA Family 27 104 126 22.5 8.8e-05 1 CL0184 TCONS_00003962 116 193 83 198 PF00892.15 EamA Family 27 104 126 22.8 6.9e-05 1 CL0184 TCONS_00004002 60 95 60 95 PF14670.1 FXa_inhibition Domain 1 36 36 41.4 1.1e-10 1 CL0001 TCONS_00004002 101 137 101 137 PF14670.1 FXa_inhibition Domain 1 36 36 34.7 1.3e-08 1 CL0001 TCONS_00004002 180 219 180 219 PF07645.10 EGF_CA Domain 1 42 42 41.1 1.2e-10 1 CL0001 TCONS_00004002 230 265 230 265 PF14670.1 FXa_inhibition Domain 1 36 36 36.2 4.6e-09 1 CL0001 TCONS_00004002 311 346 311 346 PF14670.1 FXa_inhibition Domain 1 36 36 36.9 2.8e-09 1 CL0001 TCONS_00004002 463 508 462 508 PF00053.19 Laminin_EGF Family 1 49 49 20.3 0.00038 1 CL0001 TCONS_00004002 684 725 677 727 PF00053.19 Laminin_EGF Family 3 47 49 13.7 0.044 1 CL0001 TCONS_00004002 768 812 768 814 PF00053.19 Laminin_EGF Family 1 49 49 15.6 0.011 1 CL0001 TCONS_00004002 941 978 941 986 PF00053.19 Laminin_EGF Family 1 41 49 13.7 0.043 1 CL0001 TCONS_00004003 165 200 165 200 PF14670.1 FXa_inhibition Domain 1 36 36 41.1 1.4e-10 1 CL0001 TCONS_00004003 206 242 206 242 PF14670.1 FXa_inhibition Domain 1 36 36 34.4 1.7e-08 1 CL0001 TCONS_00004003 285 324 285 324 PF07645.10 EGF_CA Domain 1 42 42 40.8 1.6e-10 1 CL0001 TCONS_00004003 335 370 335 370 PF14670.1 FXa_inhibition Domain 1 36 36 35.8 6e-09 1 CL0001 TCONS_00004003 416 451 416 451 PF14670.1 FXa_inhibition Domain 1 36 36 36.5 3.7e-09 1 CL0001 TCONS_00004003 568 613 568 613 PF00053.19 Laminin_EGF Family 1 49 49 19.9 0.00049 1 CL0001 TCONS_00004003 873 917 873 919 PF00053.19 Laminin_EGF Family 1 49 49 15.5 0.012 1 CL0001 TCONS_00004003 1132 1169 1132 1174 PF00053.19 Laminin_EGF Family 1 41 49 19.0 0.00097 1 CL0001 TCONS_00004003 1175 1213 1175 1221 PF00053.19 Laminin_EGF Family 1 41 49 15.5 0.011 1 CL0001 TCONS_00004003 1348 1385 1347 1393 PF00053.19 Laminin_EGF Family 1 41 49 14.5 0.024 1 CL0001 TCONS_00004004 225 249 223 251 PF00400.27 WD40 Repeat 13 37 39 26.2 4.9e-06 1 CL0186 TCONS_00004005 225 249 223 251 PF00400.27 WD40 Repeat 13 37 39 26.3 4.6e-06 1 CL0186 TCONS_00004033 18 98 17 100 PF03061.17 4HBT Domain 2 77 79 54.2 1.2e-14 1 CL0050 predicted_active_site[30] TCONS_00004033 191 260 191 266 PF03061.17 4HBT Domain 1 71 79 62.1 3.8e-17 1 CL0050 predicted_active_site[204,204] TCONS_00004034 39 119 38 121 PF03061.17 4HBT Domain 2 77 79 54.0 1.3e-14 1 CL0050 predicted_active_site[51] TCONS_00004034 212 281 212 287 PF03061.17 4HBT Domain 1 71 79 62.0 4.2e-17 1 CL0050 predicted_active_site[225,225] TCONS_00004035 69 149 68 151 PF03061.17 4HBT Domain 2 77 79 53.8 1.5e-14 1 CL0050 predicted_active_site[81] TCONS_00004035 242 311 242 317 PF03061.17 4HBT Domain 1 71 79 61.8 4.8e-17 1 CL0050 predicted_active_site[255,255] TCONS_00004036 127 196 127 203 PF03061.17 4HBT Domain 1 71 79 62.8 2.4e-17 1 CL0050 predicted_active_site[140,140] TCONS_00004037 59 139 58 141 PF03061.17 4HBT Domain 2 77 79 53.9 1.4e-14 1 CL0050 predicted_active_site[71] TCONS_00004037 232 301 232 307 PF03061.17 4HBT Domain 1 71 79 61.9 4.6e-17 1 CL0050 predicted_active_site[245,245] TCONS_00004042 151 228 150 230 PF00531.17 Death Domain 2 81 83 62.9 1.7e-17 1 CL0041 TCONS_00004044 109 186 108 188 PF00531.17 Death Domain 2 81 83 63.5 1.1e-17 1 CL0041 TCONS_00004046 334 411 333 413 PF00531.17 Death Domain 2 81 83 61.4 4.9e-17 1 CL0041 TCONS_00004049 343 420 342 422 PF00531.17 Death Domain 2 81 83 61.4 5.1e-17 1 CL0041 TCONS_00004051 73 115 73 115 PF00020.13 TNFR_c6 Domain 1 39 39 21.4 0.00019 1 No_clan TCONS_00004066 25 132 25 133 PF00651.26 BTB Domain 1 110 111 102.0 1.6e-29 1 CL0033 TCONS_00004066 138 239 138 239 PF07707.10 BACK Domain 1 103 103 83.2 9.6e-24 1 CL0033 TCONS_00004066 288 321 284 321 PF01344.20 Kelch_1 Repeat 14 47 47 25.3 7.9e-06 1 CL0186 TCONS_00004066 327 368 326 369 PF01344.20 Kelch_1 Repeat 4 46 47 38.3 6.7e-10 1 CL0186 TCONS_00004066 371 408 371 409 PF01344.20 Kelch_1 Repeat 1 46 47 21.6 0.00011 1 CL0186 TCONS_00004067 4 41 4 42 PF01344.20 Kelch_1 Repeat 1 46 47 23.2 3.6e-05 1 CL0186 TCONS_00004067 135 182 134 183 PF13964.1 Kelch_6 Repeat 2 49 50 38.0 1.1e-09 1 CL0186 TCONS_00004068 25 132 25 133 PF00651.26 BTB Domain 1 110 111 101.8 1.9e-29 1 CL0033 TCONS_00004068 138 239 138 239 PF07707.10 BACK Domain 1 103 103 82.9 1.1e-23 1 CL0033 TCONS_00004068 288 321 284 321 PF01344.20 Kelch_1 Repeat 14 47 47 25.1 9e-06 1 CL0186 TCONS_00004068 327 368 326 369 PF01344.20 Kelch_1 Repeat 4 46 47 38.1 7.6e-10 1 CL0186 TCONS_00004068 371 408 371 409 PF01344.20 Kelch_1 Repeat 1 46 47 21.4 0.00013 1 CL0186 TCONS_00004068 502 549 501 550 PF13964.1 Kelch_6 Repeat 2 49 50 36.1 4.4e-09 1 CL0186 TCONS_00004102 18 236 13 274 PF00002.19 7tm_2 Family 8 211 243 53.1 2.2e-14 1 CL0192 TCONS_00004103 18 177 13 225 PF00002.19 7tm_2 Family 8 162 243 48.6 5.3e-13 1 CL0192 TCONS_00004104 18 177 13 208 PF00002.19 7tm_2 Family 8 162 243 50.8 1.1e-13 1 CL0192 TCONS_00004110 169 257 169 258 PF00028.12 Cadherin Family 1 92 93 34.6 1.6e-08 1 CL0159 TCONS_00004110 363 551 360 554 PF13385.1 Laminin_G_3 Domain 4 153 157 45.5 8.5e-12 1 CL0004 TCONS_00004111 159 247 159 248 PF00028.12 Cadherin Family 1 92 93 34.7 1.6e-08 1 CL0159 TCONS_00004111 353 541 350 544 PF13385.1 Laminin_G_3 Domain 4 153 157 45.5 8.4e-12 1 CL0004 TCONS_00004112 169 257 169 258 PF00028.12 Cadherin Family 1 92 93 34.7 1.5e-08 1 CL0159 TCONS_00004112 363 532 360 535 PF13385.1 Laminin_G_3 Domain 4 153 157 48.2 1.3e-12 1 CL0004 TCONS_00004208 203 249 200 249 PF14604.1 SH3_9 Domain 5 49 49 34.1 1.4e-08 1 CL0010 TCONS_00004209 79 125 76 125 PF14604.1 SH3_9 Domain 5 49 49 35.5 5e-09 1 CL0010 TCONS_00004210 383 558 380 559 PF00621.15 RhoGEF Domain 4 179 180 118.3 3.2e-34 1 No_clan TCONS_00004210 726 772 723 772 PF14604.1 SH3_9 Domain 5 49 49 32.1 5.9e-08 1 CL0010 TCONS_00004224 180 243 180 243 PF06758.8 DUF1220 Domain 1 67 67 82.9 9.8e-24 1 No_clan TCONS_00004224 451 514 451 514 PF06758.8 DUF1220 Domain 1 67 67 85.4 1.6e-24 1 No_clan TCONS_00004224 722 782 722 784 PF06758.8 DUF1220 Domain 1 64 67 88.1 2.3e-25 1 No_clan TCONS_00004224 808 870 808 871 PF06758.8 DUF1220 Domain 1 66 67 86.6 6.7e-25 1 No_clan TCONS_00004224 880 946 880 946 PF06758.8 DUF1220 Domain 1 67 67 102.9 5.7e-30 1 No_clan TCONS_00004224 955 1021 955 1021 PF06758.8 DUF1220 Domain 1 67 67 113.0 4e-33 1 No_clan TCONS_00004224 1028 1094 1028 1094 PF06758.8 DUF1220 Domain 1 67 67 119.7 3.2e-35 1 No_clan TCONS_00004225 180 240 180 242 PF06758.8 DUF1220 Domain 1 64 67 89.9 6.4e-26 1 No_clan TCONS_00004225 266 328 266 329 PF06758.8 DUF1220 Domain 1 66 67 88.4 1.8e-25 1 No_clan TCONS_00004225 338 404 338 404 PF06758.8 DUF1220 Domain 1 67 67 104.7 1.5e-30 1 No_clan TCONS_00004226 180 240 180 242 PF06758.8 DUF1220 Domain 1 64 67 89.9 6.4e-26 1 No_clan TCONS_00004226 266 328 266 329 PF06758.8 DUF1220 Domain 1 66 67 88.4 1.8e-25 1 No_clan TCONS_00004226 338 404 338 404 PF06758.8 DUF1220 Domain 1 67 67 104.7 1.5e-30 1 No_clan TCONS_00004227 180 243 180 243 PF06758.8 DUF1220 Domain 1 67 67 86.3 8.5e-25 1 No_clan TCONS_00004227 451 511 451 513 PF06758.8 DUF1220 Domain 1 64 67 89.0 1.2e-25 1 No_clan TCONS_00004227 537 599 537 600 PF06758.8 DUF1220 Domain 1 66 67 87.5 3.5e-25 1 No_clan TCONS_00004227 609 674 609 674 PF06758.8 DUF1220 Domain 1 66 67 101.6 1.4e-29 1 No_clan TCONS_00004240 67 282 62 282 PF00089.21 Trypsin Domain 9 220 220 156.0 1e-45 1 CL0124 TCONS_00004241 30 108 19 110 PF00024.21 PAN_1 Domain 3 77 79 40.5 1.6e-10 1 CL0168 TCONS_00004241 119 156 75 156 PF00051.13 Kringle Domain 43 79 79 46.3 3.3e-12 1 No_clan TCONS_00004241 161 238 161 238 PF00051.13 Kringle Domain 1 79 79 99.4 8.6e-29 1 No_clan TCONS_00004241 253 345 253 345 PF00051.13 Kringle Domain 1 79 79 31.3 1.5e-07 1 No_clan TCONS_00004241 354 390 354 415 PF00051.13 Kringle Domain 1 37 79 36.6 3.5e-09 1 No_clan TCONS_00004241 437 464 425 464 PF00051.13 Kringle Domain 53 79 79 26.6 4.5e-06 1 No_clan TCONS_00004241 511 682 499 682 PF00089.21 Trypsin Domain 49 220 220 99.1 2.6e-28 1 CL0124 TCONS_00004266 1 58 1 58 PF13764.1 E3_UbLigase_R4 Family 746 802 802 31.9 3.3e-08 1 No_clan TCONS_00004267 1 104 1 107 PF13764.1 E3_UbLigase_R4 Family 72 173 802 130.0 7.1e-38 1 No_clan TCONS_00004267 113 686 105 686 PF13764.1 E3_UbLigase_R4 Family 223 802 802 753.4 2.3e-226 1 No_clan TCONS_00004269 58 98 58 99 PF13764.1 E3_UbLigase_R4 Family 1 41 802 76.2 1.3e-21 1 No_clan TCONS_00004269 99 827 98 827 PF13764.1 E3_UbLigase_R4 Family 69 802 802 940.4 6.8e-283 1 No_clan TCONS_00004270 78 874 78 874 PF13764.1 E3_UbLigase_R4 Family 1 802 802 1100.1 0 1 No_clan TCONS_00004271 76 872 76 872 PF13764.1 E3_UbLigase_R4 Family 1 802 802 1100.1 0 1 No_clan TCONS_00004311 1 78 1 78 PF15170.1 CaM-KIIN Family 1 79 79 157.6 5.4e-47 1 No_clan TCONS_00004325 5 70 1 71 PF00538.14 Linker_histone Domain 9 75 77 44.2 1.5e-11 1 No_clan TCONS_00004326 7 78 5 80 PF00538.14 Linker_histone Domain 3 75 77 58.0 7e-16 1 No_clan TCONS_00004326 115 178 108 178 PF00538.14 Linker_histone Domain 13 77 77 38.2 1.1e-09 1 No_clan TCONS_00004326 194 259 189 260 PF00538.14 Linker_histone Domain 9 75 77 42.7 4.4e-11 1 No_clan TCONS_00004327 121 192 119 194 PF00538.14 Linker_histone Domain 3 75 77 57.5 1e-15 1 No_clan TCONS_00004327 229 292 222 292 PF00538.14 Linker_histone Domain 13 77 77 37.7 1.6e-09 1 No_clan TCONS_00004327 308 373 303 374 PF00538.14 Linker_histone Domain 9 75 77 42.2 6.3e-11 1 No_clan TCONS_00004328 159 230 157 232 PF00538.14 Linker_histone Domain 3 75 77 57.4 1.1e-15 1 No_clan TCONS_00004328 267 330 260 330 PF00538.14 Linker_histone Domain 13 77 77 37.5 1.8e-09 1 No_clan TCONS_00004328 346 411 341 412 PF00538.14 Linker_histone Domain 9 75 77 42.0 7e-11 1 No_clan TCONS_00004329 121 192 119 194 PF00538.14 Linker_histone Domain 3 75 77 57.5 1e-15 1 No_clan TCONS_00004329 229 292 222 292 PF00538.14 Linker_histone Domain 13 77 77 37.7 1.6e-09 1 No_clan TCONS_00004329 308 373 303 374 PF00538.14 Linker_histone Domain 9 75 77 42.2 6.3e-11 1 No_clan TCONS_00004330 159 230 157 232 PF00538.14 Linker_histone Domain 3 75 77 57.4 1.1e-15 1 No_clan TCONS_00004330 267 330 260 330 PF00538.14 Linker_histone Domain 13 77 77 37.5 1.8e-09 1 No_clan TCONS_00004330 346 411 341 412 PF00538.14 Linker_histone Domain 9 75 77 42.0 7e-11 1 No_clan TCONS_00004332 158 229 156 231 PF00538.14 Linker_histone Domain 3 75 77 58.4 5.4e-16 1 No_clan TCONS_00004332 266 326 259 327 PF00538.14 Linker_histone Domain 13 74 77 35.7 6.7e-09 1 No_clan TCONS_00004376 167 231 167 235 PF00076.17 RRM_1 Domain 1 64 70 50.8 9.4e-14 1 CL0221 TCONS_00004376 248 312 248 318 PF00076.17 RRM_1 Domain 1 59 70 30.4 2.1e-07 1 CL0221 TCONS_00004376 346 407 346 408 PF00076.17 RRM_1 Domain 1 69 70 56.1 2e-15 1 CL0221 TCONS_00004377 167 231 167 235 PF00076.17 RRM_1 Domain 1 64 70 50.8 9.3e-14 1 CL0221 TCONS_00004377 248 309 248 315 PF00076.17 RRM_1 Domain 1 59 70 35.8 4.3e-09 1 CL0221 TCONS_00004377 343 404 343 405 PF00076.17 RRM_1 Domain 1 69 70 56.1 2e-15 1 CL0221 TCONS_00004378 66 130 66 134 PF00076.17 RRM_1 Domain 1 64 70 51.1 7.3e-14 1 CL0221 TCONS_00004378 147 208 147 214 PF00076.17 RRM_1 Domain 1 59 70 36.2 3.4e-09 1 CL0221 TCONS_00004378 242 303 242 304 PF00076.17 RRM_1 Domain 1 69 70 56.5 1.6e-15 1 CL0221 TCONS_00004379 66 130 66 134 PF00076.17 RRM_1 Domain 1 64 70 51.1 7.4e-14 1 CL0221 TCONS_00004379 147 211 147 217 PF00076.17 RRM_1 Domain 1 59 70 30.8 1.6e-07 1 CL0221 TCONS_00004379 245 306 245 307 PF00076.17 RRM_1 Domain 1 69 70 56.4 1.6e-15 1 CL0221 TCONS_00004380 28 92 28 96 PF00076.17 RRM_1 Domain 1 64 70 51.3 6.6e-14 1 CL0221 TCONS_00004380 109 170 109 176 PF00076.17 RRM_1 Domain 1 59 70 36.3 3e-09 1 CL0221 TCONS_00004380 204 265 204 266 PF00076.17 RRM_1 Domain 1 69 70 56.6 1.4e-15 1 CL0221 TCONS_00004381 129 193 129 197 PF00076.17 RRM_1 Domain 1 64 70 50.9 8.6e-14 1 CL0221 TCONS_00004381 210 271 210 277 PF00076.17 RRM_1 Domain 1 59 70 35.9 3.9e-09 1 CL0221 TCONS_00004381 305 366 305 367 PF00076.17 RRM_1 Domain 1 69 70 56.2 1.8e-15 1 CL0221 TCONS_00004382 88 149 88 155 PF00076.17 RRM_1 Domain 1 59 70 36.4 2.8e-09 1 CL0221 TCONS_00004382 183 244 183 245 PF00076.17 RRM_1 Domain 1 69 70 56.7 1.3e-15 1 CL0221 TCONS_00004439 20 27 19 71 PF07004.7 SHIPPO-rpt Repeat 2 9 37 4.8 59 1 No_clan TCONS_00004439 140 159 140 171 PF07004.7 SHIPPO-rpt Repeat 1 20 37 11.2 0.54 1 No_clan TCONS_00004439 178 210 178 213 PF07004.7 SHIPPO-rpt Repeat 1 34 37 14.6 0.047 1 No_clan TCONS_00004439 220 235 219 246 PF07004.7 SHIPPO-rpt Repeat 2 17 37 12.4 0.22 1 No_clan TCONS_00004439 259 269 259 276 PF07004.7 SHIPPO-rpt Repeat 1 11 37 9.2 2.3 1 No_clan TCONS_00004440 95 114 95 126 PF07004.7 SHIPPO-rpt Repeat 1 20 37 11.5 0.43 1 No_clan TCONS_00004440 133 165 133 168 PF07004.7 SHIPPO-rpt Repeat 1 34 37 14.9 0.036 1 No_clan TCONS_00004440 175 191 174 202 PF07004.7 SHIPPO-rpt Repeat 2 18 37 12.8 0.17 1 No_clan TCONS_00004440 214 224 214 231 PF07004.7 SHIPPO-rpt Repeat 1 11 37 9.5 1.8 1 No_clan TCONS_00004441 67 74 66 93 PF07004.7 SHIPPO-rpt Repeat 2 9 37 4.3 83 1 No_clan TCONS_00004441 187 206 187 218 PF07004.7 SHIPPO-rpt Repeat 1 20 37 10.9 0.66 1 No_clan TCONS_00004441 225 257 225 260 PF07004.7 SHIPPO-rpt Repeat 1 34 37 14.3 0.058 1 No_clan TCONS_00004441 267 282 266 293 PF07004.7 SHIPPO-rpt Repeat 2 17 37 12.2 0.27 1 No_clan TCONS_00004441 306 316 306 323 PF07004.7 SHIPPO-rpt Repeat 1 11 37 9.0 2.7 1 No_clan TCONS_00004442 67 74 66 93 PF07004.7 SHIPPO-rpt Repeat 2 9 37 4.3 83 1 No_clan TCONS_00004442 187 206 187 218 PF07004.7 SHIPPO-rpt Repeat 1 20 37 10.9 0.66 1 No_clan TCONS_00004442 225 257 225 260 PF07004.7 SHIPPO-rpt Repeat 1 34 37 14.3 0.058 1 No_clan TCONS_00004442 267 282 266 293 PF07004.7 SHIPPO-rpt Repeat 2 17 37 12.2 0.27 1 No_clan TCONS_00004442 306 316 306 323 PF07004.7 SHIPPO-rpt Repeat 1 11 37 9.0 2.7 1 No_clan TCONS_00004443 15 25 15 52 PF07004.7 SHIPPO-rpt Repeat 1 11 37 4.0 1.1e+02 1 No_clan TCONS_00004443 55 74 55 86 PF07004.7 SHIPPO-rpt Repeat 1 20 37 13.1 0.13 1 No_clan TCONS_00004443 93 105 93 113 PF07004.7 SHIPPO-rpt Repeat 1 13 37 13.6 0.094 1 No_clan