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comparison test-data/menus/test.xml @ 17:ff11d442feed draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
author iuc
date Wed, 15 Nov 2017 15:15:27 -0500
parents ad4b9d7eae6a
children 1cfc579079a6
comparison
equal deleted inserted replaced
16:b5c5470d7c09 17:ff11d442feed
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <root> 2 <root>
3 <metadata> 3 <metadata>
4 <gencode>11</gencode> 4 <gencode>11</gencode>
5 <genomes> 5 <genomes>
6 <genome>/tmp/tmplFZ5li/files/000/dataset_14.dat</genome> 6 <genome path="/tmp/tmpnh6QWY/files/000/dataset_14.dat">
7 <metadata>
8 <dataset id="1ae74d26531588b0" hid="1"
9 size="171.6 KB"
10 edam_format="format_1929"
11 file_ext="fasta" />
12 <history id="8155e4b4bf1581ff"
13 user_email="test@bx.psu.edu"
14 user_id="2"
15 display_name="test_history"/>
16 <metadata
17 dbkey="hg17"
18 data_lines="2881"
19 sequences="1"
20 />
21 <tool
22 tool_id="upload1"
23 tool_version="1.1.4"
24 />
25 </metadata>
26 </genome>
7 </genomes> 27 </genomes>
8 <general> 28 <general>
9 <defaultLocation></defaultLocation> 29 <defaultLocation></defaultLocation>
10 <trackPadding>20</trackPadding> 30 <trackPadding>20</trackPadding>
11 31
15 <show_nav>true</show_nav> 35 <show_nav>true</show_nav>
16 <show_overview>true</show_overview> 36 <show_overview>true</show_overview>
17 <show_menu>true</show_menu> 37 <show_menu>true</show_menu>
18 <hideGenomeOptions>false</hideGenomeOptions> 38 <hideGenomeOptions>false</hideGenomeOptions>
19 </general> 39 </general>
40 <galaxyUrl>http://localhost:8080</galaxyUrl>
20 </metadata> 41 </metadata>
21 <tracks> 42 <tracks>
22 <track cat="With menu or index" format="gene_calls" visibility="default_off"> 43 <track cat="With menu or index" format="gene_calls" visibility="default_off">
23 <files> 44 <files>
24 <trackFile path="/tmp/tmplFZ5li/files/000/dataset_15.dat" ext="gff3" label="1.gff" /> 45 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff">
46 <metadata>
47 <dataset id="440a6c2b5d9efe20" hid="2"
48 size="2.3 KB"
49 edam_format="format_1975"
50 file_ext="gff3" />
51 <history id="8155e4b4bf1581ff"
52 user_email="test@bx.psu.edu"
53 user_id="2"
54 display_name="test_history"/>
55 <metadata
56 dbkey="hg17"
57 data_lines="27"
58 comment_lines="19"
59 columns="9"
60 column_names=""
61 delimiter="__tc__"
62 attributes="6"
63 />
64 <tool
65 tool_id="upload1"
66 tool_version="1.1.4"
67 />
68 </metadata>
69 </trackFile>
25 </files> 70 </files>
26 71
27 <options> 72 <options>
28 <style> 73 <style>
74 <overridePlugins>False</overridePlugins>
75 <overrideDraggable>False</overrideDraggable>
29 <className>feature</className> 76 <className>feature</className>
30 <description>note,description</description> 77 <description>note,description</description>
31 <label>name,id</label> 78 <label>product,name,id</label>
32 <height>100px</height> 79 <height>10px</height>
80 <maxHeight>600</maxHeight>
33 </style> 81 </style>
34 <scaling> 82 <scaling>
35 <method>ignore</method> 83 <method>ignore</method>
36 <scheme> 84 <scheme>
37 <color>__auto__</color> 85 <color>__auto__</color>
60 </gff> 108 </gff>
61 </options> 109 </options>
62 </track> 110 </track>
63 <track cat="With menu or index" format="gene_calls" visibility="default_off"> 111 <track cat="With menu or index" format="gene_calls" visibility="default_off">
64 <files> 112 <files>
65 <trackFile path="/tmp/tmplFZ5li/files/000/dataset_15.dat" ext="gff3" label="1.gff" /> 113 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff">
114 <metadata>
115 <dataset id="440a6c2b5d9efe20" hid="2"
116 size="2.3 KB"
117 edam_format="format_1975"
118 file_ext="gff3" />
119 <history id="8155e4b4bf1581ff"
120 user_email="test@bx.psu.edu"
121 user_id="2"
122 display_name="test_history"/>
123 <metadata
124 dbkey="hg17"
125 data_lines="27"
126 comment_lines="19"
127 columns="9"
128 column_names=""
129 delimiter="__tc__"
130 attributes="6"
131 />
132 <tool
133 tool_id="upload1"
134 tool_version="1.1.4"
135 />
136 </metadata>
137 </trackFile>
66 </files> 138 </files>
67 139
68 <options> 140 <options>
69 <style> 141 <style>
142 <overridePlugins>False</overridePlugins>
143 <overrideDraggable>False</overrideDraggable>
70 <className>feature</className> 144 <className>feature</className>
71 <description>note,description</description> 145 <description>note,description</description>
72 <label>name,id</label> 146 <label>product,name,id</label>
73 <height>100px</height> 147 <height>10px</height>
148 <maxHeight>600</maxHeight>
74 </style> 149 </style>
75 <scaling> 150 <scaling>
76 <method>ignore</method> 151 <method>ignore</method>
77 <scheme> 152 <scheme>
78 <color>__auto__</color> 153 <color>__auto__</color>
86 <index>true</index> 161 <index>true</index>
87 </gff> 162 </gff>
88 </options> 163 </options>
89 </track> 164 </track>
90 </tracks> 165 </tracks>
166 <plugins
167 ComboTrackSelector=""
168 Bookmarks=""
169 GCContent=""
170 theme=""
171 />
91 </root> 172 </root>