Mercurial > repos > iuc > jbrowse

diff readme.rst @ 25:1cfc579079a6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit b6f9a87b6091cc881a49e0b6acfadc5e7786967f
author iuc
date Tue, 29 Jan 2019 05:34:16 -0500
parents 836d1aa3e89a
children 08776ba76cf5
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--- a/readme.rst	Wed Jan 16 03:28:29 2019 -0500
+++ b/readme.rst	Tue Jan 29 05:34:16 2019 -0500
@@ -25,18 +25,31 @@
 History
 =======
 
--  0.7 Support for plugins (currently GC Content, Bookmarks, ComboTrackSelector),
-   track metadata
--  0.5.2 Support for CanvasFeatures options.
--  0.5.1 Support for contextual menus. Conda tests.
--  0.5 Update existing instances on disk. Index names. Support HTML tracks
-   instead of Canvas. Support default tracks. General JBrowse optinos
--  0.4 Support for dataset collections and customisation of tracks including
-   labelling, colours, styling. Added support for genetic code selection.
-   Fixed package installation recipe issues.
--  0.3 Added support for BigWig, etc.
--  0.2 Added support for BAM, Blast, VCF.
--  0.1 Initial public release.
+- 1.16.1+galaxy0
+
+    - UPDATED to JBrowse 1.16.1
+    - ADDED support for MultiBigWig plugin
+    - ADDED support for tabix indexing of fasta and gff
+    - ADDED support for REST and SPARQL endpoints
+    - ADDED option to change chunk size for BAM tracks
+    - FIXED loading of VCF files. They were gzipped and the URLs were incorrect
+    - FIXED metadata on tracks types other than GFF+HTML
+    - FIXED infrastructure URL parsing (and embedding in links) for some tracks
+    - REMOVED support for selecting multiple genomes as input due to tracking of track metadata
+    - REMOVED support for themes as JBrowse no longer allow runtime loading of plugins
+
+- 0.7 Support for plugins (currently GC Content, Bookmarks, ComboTrackSelector),
+  track metadata
+- 0.5.2 Support for CanvasFeatures options.
+- 0.5.1 Support for contextual menus. Conda tests.
+- 0.5 Update existing instances on disk. Index names. Support HTML tracks
+  instead of Canvas. Support default tracks. General JBrowse optinos
+- 0.4 Support for dataset collections and customisation of tracks including
+  labelling, colours, styling. Added support for genetic code selection.
+  Fixed package installation recipe issues.
+- 0.3 Added support for BigWig, etc.
+- 0.2 Added support for BAM, Blast, VCF.
+- 0.1 Initial public release.
 
 Wrapper License (MIT/BSD Style)
 ===============================