Mercurial > repos > iuc > khmer_abundance_distribution_single

comparison abundance-dist-single.xml @ 8:c018a72b523e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 14ea2dc5ef36219c908ed64b256794711ce7b902"
author iuc
date Tue, 23 Mar 2021 21:29:55 +0000
parents 55109291a355
children 385a965c6f87
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7:55109291a355 8:c018a72b523e
1 <tool id="khmer_abundance_distribution_single" name="khmer: Abundance Distribution (all-in-one)" version="@WRAPPER_VERSION@@TOOL_VERSION@"> 1 <tool id="khmer_abundance_distribution_single" name="khmer: Abundance Distribution (all-in-one)" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 <description> 2 <description>
3 Calculate abundance distribution of k-mers 3 Calculate abundance distribution of k-mers
4 </description> 4 </description>
5 <macros> 5 <macros>
6 <token name="@BINARY@">abundance-dist-single.py</token> 6 <token name="@BINARY@">abundance-dist-single.py</token>
53 <has_text text="1001,2,98,1.0" /> 53 <has_text text="1001,2,98,1.0" />
54 </assert_contents> 54 </assert_contents>
55 </output> 55 </output>
56 </test> 56 </test>
57 <test> 57 <test>
58 <param name="input_sequence_filename" value="test-abund-read-2.fa" /> 58 <param name="input_sequence_filename" value="test-abund-read-2.fq.gz" />
59 <param name="type" value="specific" /> 59 <param name="type" value="specific" />
60 <param name="tablesize_specific" value="1e7" /> 60 <param name="tablesize_specific" value="1e7" />
61 <param name="n_tables" value="2" /> 61 <param name="n_tables" value="2" />
62 <param name="ksize" value="17" /> 62 <param name="ksize" value="17" />
63 <param name="no_zero" value="false" /> 63 <param name="no_zero" value="false" />