Mercurial > repos > iuc > khmer_abundance_distribution_single
diff abundance-dist-single.xml @ 7:55109291a355 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 7de685f4763d988a5a9abce4a9c2b4714daaf165"
| author | iuc |
|---|---|
| date | Wed, 18 Dec 2019 16:04:44 -0500 |
| parents | 20154a62bd11 |
| children | c018a72b523e |
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--- a/abundance-dist-single.xml Fri Sep 07 10:59:39 2018 -0400 +++ b/abundance-dist-single.xml Wed Dec 18 16:04:44 2019 -0500 @@ -1,4 +1,4 @@ -<tool id="khmer_abundance_distribution_single" name="Abundance Distribution (all-in-one)" version="@WRAPPER_VERSION@.0"> +<tool id="khmer_abundance_distribution_single" name="khmer: Abundance Distribution (all-in-one)" version="@WRAPPER_VERSION@@TOOL_VERSION@"> <description> Calculate abundance distribution of k-mers </description> @@ -10,8 +10,7 @@ <expand macro="stdio" /> <expand macro="version" /> <command><![CDATA[ -set -xu && -mkdir output && cd output && +set -u && @BINARY@ @TABLEPARAMS@ ${zero} @@ -28,14 +27,14 @@ </command> <inputs> <expand macro="input_sequence_filename" /> - <param name="save_countgraph" type="boolean" label="Save the k-mer countgraph to a file" - help="(--savegraph)" /> + <param argument="--savegraph" name="save_countgraph" type="boolean" label="Save the k-mer countgraph to a file" + help="" /> <expand macro="input_zero" /> <expand macro="input_bigcount" /> <expand macro="tableinputs" /> </inputs> <outputs> - <data name="optional_output_countgraph" format="oxlicg" label="${tool.name} k-mer countgraph"> + <data name="optional_output_countgraph" format="oxlicg" label="${tool.name} on ${on_string} k-mer countgraph"> <filter>save_countgraph == True</filter> </data> <expand macro="abundance-histogram-output" />