Mercurial > repos > iuc > khmer_filter_below_abundance_cutoff

comparison filter-below-abund.xml @ 6:bf716cfc3225 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit e0cd7ae10ce97bed51594e7cc0b969a803d698b7
author iuc
date Fri, 07 Sep 2018 11:01:54 -0400
parents e0e33e40d7c4
children 569001af897d
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5:d9cc87dfec6e 6:bf716cfc3225
8 </macros> 8 </macros>
9 <expand macro="requirements" /> 9 <expand macro="requirements" />
10 <expand macro="stdio" /> 10 <expand macro="stdio" />
11 <command><![CDATA[ 11 <command><![CDATA[
12 #for $num, $input in enumerate($inputs) 12 #for $num, $input in enumerate($inputs)
13 ln -s ${input} sequence-${num} && 13 ln -s '${input}' sequence-${num} &&
14 #end for 14 #end for
15 mkdir output && 15 mkdir output &&
16 cd output && 16 cd output &&
17 $__tool_directory__/@BINARY@ 17 python '$__tool_directory__/@BINARY@'
18 ${input_countgraph_filename} 18 '${input_countgraph_filename}'
19 #for $num, $input in enumerate($inputs) 19 #for $num, $input in enumerate($inputs)
20 ../sequence-${num} 20 ../sequence-${num}
21 #end for 21 #end for
22 ]]> 22 ]]>
23 </command> 23 </command>