Mercurial > repos > iuc > mageck_pathway

changeset 1:37127c23a210 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mageck commit 2eea865fe331694058922292e5681b96f4f0b4c7
author iuc
date Sat, 17 Feb 2018 10:40:59 -0500
parents c871e57e2abb
children ff3716b505d3
files mageck_pathway.xml test-data/out.count.bam.txt test-data/out.count.fastq.txt
diffstat 3 files changed, 3 insertions(+), 3 deletions(-) [+]
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line diff
--- a/mageck_pathway.xml	Wed Feb 14 06:41:39 2018 -0500
+++ b/mageck_pathway.xml	Sat Feb 17 10:40:59 2018 -0500
@@ -46,7 +46,7 @@
                 label="Alpha value for RRA pathway enrichment" help="The default alpha value for RRA pathway enrichment. Default: 0.25" />
             <param argument="--permutation" type="integer" min="0" value="1000" optional="true" label="Permutation number for GSEA" help="Default: 1000" />
             <param name="out_log" type="boolean" truevalue="True" falsevalue="" checked="false"
-                label="Output logfile" help="This file includes the logging information during the execution. Default: No" />
+                label="Output Log file" help="This file includes the logging information during the execution. Default: No" />
         </section>
 
     </inputs>
--- a/test-data/out.count.bam.txt	Wed Feb 14 06:41:39 2018 -0500
+++ b/test-data/out.count.bam.txt	Sat Feb 17 10:40:59 2018 -0500
@@ -1,4 +1,4 @@
-sgRNA	Gene	sample1
+sgRNA	Gene	test1.bam
 s_10007	CCNA1	0
 s_10008	CCNA1	0
 s_10027	CCNC	0
--- a/test-data/out.count.fastq.txt	Wed Feb 14 06:41:39 2018 -0500
+++ b/test-data/out.count.fastq.txt	Sat Feb 17 10:40:59 2018 -0500
@@ -1,4 +1,4 @@
-sgRNA	Gene	sample1
+sgRNA	Gene	test1.fastq.gz
 s_47512	RNF111	1
 s_24835	HCFC1R1	1
 s_14784	CYP4B1	4