Mercurial > repos > iuc > medaka_consensus

diff consensus.xml @ 14:b2aae698b9d3 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 52289bc7b99bfa8a3bda46cb35cea98399419dab"
author iuc
date Thu, 18 Nov 2021 20:01:50 +0000
parents 0413e62b757a
children 682d1e2c8be4
line wrap: on
line diff
--- a/consensus.xml	Fri Sep 17 20:22:04 2021 +0000
+++ b/consensus.xml	Thu Nov 18 20:01:50 2021 +0000
@@ -94,7 +94,7 @@
             <param name="bam" value="alignment.bam"/>
             <output name="out_result">
                 <assert_contents>
-                    <has_size value="32624"/>
+                    <has_size value="26224"/>
                 </assert_contents>
             </output>
         </test>
@@ -111,7 +111,7 @@
             <param name="out" value="result,log"/>
             <output name="out_result">
                 <assert_contents>
-                    <has_size value="38400"/>
+                    <has_size value="32000"/>
                 </assert_contents>
             </output>
             <output name="out_log">
@@ -130,13 +130,20 @@
 
 The module *consensus* runs inference from a trained model and alignments.
 
-**Input**
+----
 
-Alignment (BAM)
+.. class:: infomark
+
+**Inputs and outputs**
 
-**Output**
+Medaka requires a BAM file as input, and generates a Hierarchical Data Format (H5/HDF) datafile.
+
 
-Results (H5/HDF)
+@MODELS@
+
+----
+
+.. class:: infomark
 
 **References**