Mercurial > repos > iuc > medaka_snp

diff test-data/annotate_vcf_test.vcf @ 0:179342c7b86c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 4d3dfd4bcb567178107dcfd808ff03f9fec0bdbd
author iuc
date Wed, 12 Oct 2022 07:43:59 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/annotate_vcf_test.vcf	Wed Oct 12 07:43:59 2022 +0000
@@ -0,0 +1,9 @@
+##fileformat=VCFv4.1
+##medaka_version=1.0.3
+##contig=<ID=NC_045512.2>
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Medaka genotype.">
+##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Medaka genotype quality score">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMPLE
+NC_045512.2	45	.	G	C	46.359	PASS		GT:GQ	1:46
+NC_045512.2	685	.	AAAGTCATTT	A	260.487	PASS		GT:GQ	1:260
+NC_045512.2	1813	.	TA	T	11.034	PASS		GT:GQ	1:11