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comparison test-data/output1.html @ 0:6095db402811 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
author iuc
date Fri, 20 Apr 2018 09:03:44 -0400
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1 <!doctype html>
2 <html>
3 <head>
4 <meta charset="UTF-8">
5 <title>MEME ChIP</title>
6 </head>
7 <body onload="page_loaded()" onpageshow="page_shown(event)"
8 onresize="page_resize()" onscroll="delayed_process_draw_tasks()">
9 <div class="prog_logo big">
10 <h1>MEME-ChIP</h1>
11 <h2>Motif Analysis of Large Nucleotide Datasets</h2>
12 </div>
13 <p>
14 If you use MEME-ChIP in your research, please cite the following paper:<br />
15 </p>
16 <!-- navigation -->
17 <div class="pad2">
18 <a class="jump" href="#data_sec">Motifs</a>
19 &nbsp;&nbsp;|&nbsp;&nbsp;
20 <a class="jump" href="#programs_sec">Programs</a>
21 &nbsp;&nbsp;|&nbsp;&nbsp;
22 <a class="jump" href="#input_sec">Input Files</a>
23 &nbsp;&nbsp;|&nbsp;&nbsp;
24 <a class="jump" href="#info_sec">Program information</a>
25 </div>
26 <!-- alert the user when their browser is not up to the task -->
27 <noscript><h1 style="color:red">Javascript is required to view these results!</h1></noscript>
28 <h1 id="html5_warning" style="color:red; display:none;">Your browser does not support canvas!</h1>
29 <script>if (!window.HTMLCanvasElement) $("html5_warning").style.display = "block";</script>
30 <!-- write out the job description -->
31 <span id="ins_desc"></span>
32 <script>make_description($("ins_desc"), data["description"]);</script>
33 <!-- write out clustered motifs -->
34 <h2 class="mainh pad2" id="data_sec">Motifs</h2>
35 <div class="box">
36 <p>The significant motifs
37 (E-value &le; <span id="ins_filter_thresh"></span>)
38 found by the programs MEME, DREME and CentriMo;
39 clustered by similarity and ordered by E-value.</p>
40 <script>$("ins_filter_thresh").innerHTML = data["filter_thresh"]; </script>
41 <div class="motifbox">
42 <span class="action" onclick="show_all(true)">Expand All Clusters</span>
43 <span class="action" onclick="show_all(false)">Collapse All Clusters</span>
44 </div>
45 <div id="logos"></div>
46 <script>make_clustered_motifs($("logos"));</script>
47 </div>
48 <!-- write out a list of all programs run -->
49 <h2 class="mainh pad2" id="programs_sec">Programs</h2>
50 <div class="box" id="program_listing"></div>
51 <script>make_program_listing($("program_listing"));</script>
52 <!-- write out input files -->
53 <h2 id="input_sec" class="mainh pad2">Input Files</h2>
54 <div id="input_files" class="box">
55 <div id="sequence_db"></div>
56 <script>make_sequence_db_listing('sequence_db', "Primary Sequences");</script>
57 <div id="neg_sequence_db"></div>
58 <script>make_sequence_db_listing('neg_sequence_db', "Control Sequences");</script>
59 <h4 id="motif_dbs_header">Motifs</h4>
60 <div id="motif_dbs"></div>
61 <script>make_motif_db_listing($("motif_dbs"));</script>
62 </div>
63 <!-- list information on this program -->
64 <div id="info_sec" class="bar">
65 <div class="subsection">
66 <h5 id="version">MEME-ChIP version</h5>
67 <span id="ins_version"></span>
68 (Release date: <span id="ins_release"></span>)<br>
69 </div>
70 <script>
71 $("ins_version").innerHTML = data["version"];
72 $("ins_release").innerHTML = data["release"];
73 </script>
74 <div class="subsection">
75 <h5 id="reference">Reference</h5>
76 <div class="subsection">
77 <h5 id="command">Command line summary</h5>
78 <textarea id="cmd" rows="5" style="width:100%;" readonly="readonly">
79 </textarea>
80 <script>$("cmd").value = data["cmd"].join(" ");</script>
81 </div>
82 </div>
83 </div>
84 <div id="scrollpad"></div>
85 </body>
86 </html>