Mercurial > repos > iuc > meme_meme
diff test-data/streme_output_test1.xml @ 20:faa378fa0c81 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 89ee0af6e955ff964b7984d77ad536e0a9154278
| author | iuc |
|---|---|
| date | Mon, 14 Jul 2025 21:33:26 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/streme_output_test1.xml Mon Jul 14 21:33:26 2025 +0000 @@ -0,0 +1,26 @@ + <letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/> + <letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/> + <letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/> + <letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/> + <letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/> + <letter id="V" symbol="V" equals="ACG" name="Not T"/> + <letter id="H" symbol="H" equals="ACT" name="Not G"/> + <letter id="D" symbol="D" equals="AGT" name="Not C"/> + <letter id="B" symbol="B" equals="CGT" name="Not A"/> + <letter id="M" symbol="M" equals="AC" name="Amino"/> + <letter id="R" symbol="R" equals="AG" name="Purine"/> + <letter id="W" symbol="W" equals="AT" name="Weak"/> + <letter id="S" symbol="S" equals="CG" name="Strong"/> + <letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/> + <letter id="K" symbol="K" equals="GT" name="Keto"/> + </alphabet> + <strands>both</strands> + <sequence_db A="0.245" C="0.255" G="0.255" T="0.245"/> + <background_frequencies source="--negatives--" order="2"> + <alphabet_array> + <value letter_id="A">0.244</value> + <value letter_id="C">0.256</value> + <value letter_id="G">0.256</value> + <value letter_id="T">0.244</value> + </alphabet_array> + </background_frequencies> \ No newline at end of file