Mercurial > repos > iuc > merge_metaphlan_tables

diff merge_metaphlan_tables.xml @ 8:27250f92a01a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit f3a89af137b13715f9fb13383577aceb2c445ce6
author iuc
date Sat, 03 Dec 2022 10:42:15 +0000
parents 3f05bf162005
children e073891b2afc
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line diff
--- a/merge_metaphlan_tables.xml	Wed Feb 02 22:01:39 2022 +0000
+++ b/merge_metaphlan_tables.xml	Sat Dec 03 10:42:15 2022 +0000
@@ -27,8 +27,8 @@
                 <assert_contents>
                     <has_text text="k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Corynebacteriales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_accolens"/>
                     <has_text text="dataset_"/>
-                    <has_text text="NCBI_tax_id"/>
                     <has_text text="clade_name"/>
+                    <has_line_matching expression="#.*" />
                 </assert_contents>
             </output>
         </test>
@@ -38,7 +38,7 @@
 ============
 
 MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, 
-Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. 
+Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) at the species-level. 
 
 This tool performs a table join on one or more tab-separated files with the predicted taxon relative abundances
 that have been generated by MetaPhlAn.