Mercurial > repos > iuc > migmap
view test-data/test_out_of_frame.out @ 5:2c9f2a24f7a4 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/migmap commit 35f97047b98a6444509bee371394188c1967265c"
author | iuc |
---|---|
date | Mon, 29 Mar 2021 22:16:41 +0000 |
parents | b2f1cf977ca9 |
children |
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read.header cdr3nt cdr3aa cdr.insert.qual mutations.qual v.segment d.segment j.segment cdr1.start.in.read cdr1.end.in.read cdr2.start.in.read cdr2.end.in.read cdr3.start.in.read cdr3.end.in.read v.end.in.cdr3 d.start.in.cdr3 d.end.in.cdr3 j.start.in.cdr3 v.del d.del.5 d.del.3 j.del mutations.nt.FR1 mutations.nt.CDR1 mutations.nt.FR2 mutations.nt.CDR2 mutations.nt.FR3 mutations.nt.CDR3 mutations.nt.FR4 rc complete has.cdr3 in.frame no.stop mutations.aa.FR1 mutations.aa.CDR1 mutations.aa.FR2 mutations.aa.CDR2 mutations.aa.FR3 mutations.aa.CDR3 mutations.aa.FR4 pol.v pol.d.5 pol.d.3 pol.j canonical contignt >CGTTCAGTTCTTTTGCG|PRCONS=Human-IGHD|SEQORIENT=F|CREGION=Human-IGHD-InternalC|CONSCOUNT=1|DUPCOUNT=1 TGTGCGCCGGCTTGTGGTGGTGATTGCTATAGGACAACTGGTTCGACCCCTGG CAPACGGDtg?L*DNWFDPW IIIIIIII IIIIIIIIIII IGHV7-4-1*01 IGHD2-21*01 IGHJ5*01 174 198 249 273 384 437 6 11 30 33 3 6 3 0 S7:A>G,S18:T>G,S26:T>G,S49:C>A,S54:A>T,S58:T>G,S69:G>C S94:A>C S115:A>C S332:T>C S343:A>G false true true false false S2:Q>R,S6:S>A,S8:S>S,S16:S>*,S18:K>*,S19:V>G,S23:A>P S31:Y>S S38:Q>P S110:T>T S114:K>R -1 -1 -1 -1 true CAGGTGCGGCTGGTGCAAGCTGGGTCGGAGTTGAAGAAGCCTGGGGCCTAAGTGTAGGGTTCCTGCAAGCCTTCTGGATACACCTTCACTAGCTCTGCTATGAATTGGGTGCGACCGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCTGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGCCGGCTTGTGGTGGTGATTGCTATAGGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCC