Mercurial > repos > iuc > miniprot
changeset 2:d518cf04b55c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/miniprot commit bda011acaca773960c85bfa1288fa8b74cfabb15
| author | iuc |
|---|---|
| date | Thu, 06 Apr 2023 09:20:48 +0000 |
| parents | ce04c239454b |
| children | 52bdc302299b |
| files | macros.xml miniprot.xml test-data/output.gff test-data/output.gtf test-data/output.paf |
| diffstat | 5 files changed, 3237 insertions(+), 36 deletions(-) [+] |
line wrap: on
line diff
--- a/macros.xml Fri Sep 23 22:35:23 2022 +0000 +++ b/macros.xml Thu Apr 06 09:20:48 2023 +0000 @@ -1,3 +1,8 @@ <macros> - <token name="@TOOL_VERSION@">0.3</token> + <token name="@TOOL_VERSION@">0.10</token> + <xml name="citation"> + <citations> + <citation type="doi">10.1093/bioinformatics/btad014</citation> + </citations> + </xml> </macros>
--- a/miniprot.xml Fri Sep 23 22:35:23 2022 +0000 +++ b/miniprot.xml Thu Apr 06 09:20:48 2023 +0000 @@ -13,38 +13,50 @@ #if str($adv.options) == "yes" $adv.mapping.no_splicing -c $adv.mapping.max_kmer - -G $adv.mapping.max_intron -n $adv.mapping.min_syncmers -m $adv.mapping.min_chain_score -l $adv.mapping.second_round_kmer_size -e $adv.mapping.max_extension -p $adv.mapping.score_ratio -N $adv.mapping.max_secondary_alignments + -w $adv.mapping.log_gap_penalty_weight -O $adv.alignment.gap_open -E $adv.alignment.gap_extension -J $adv.alignment.intron_open -C $adv.alignment.non_canonical_splice -F $adv.alignment.frameshift -B $adv.alignment.end_bonus + -j $adv.alignment.splice_model + #if str($adv.mapping.intron_size.mode) == 'manual' + -G $adv.mapping.intron_size.max_intron + #elif str($adv.mapping.intron_size.mode) == 'auto' + -I + #end if + #if str($adv.output.prefix) != 'MP' -P '$adv.output.prefix' #end if $adv.output.print_unmapped_proteins --outn=$adv.output.outputs_per_query + --outc=$adv.output.output_fraction_query + --outs=$adv.output.output_score_least + $adv.output.output_residue_alignment #end if #if str($db.dbtype) == 'fasta' '$db.genomic_fasta' -k $db.kmer_size - -s $db.submer_size - -b $db.bits_per_block + -b $db.bits_per_block + -M $db.modimisers + -L $db.min_ORF #else '$db.genomic_db' #end if #if str($output_format) == "gff" --gff + #else if str($output_format) == "gtf" + --gtf #end if - '$protein_fasta' - >'$output_alignment' + '$protein_fasta' > '$output_alignment' ]]></command> <inputs> <conditional name="db"> @@ -54,9 +66,10 @@ </param> <when value="fasta"> <param name="genomic_fasta" type="data" format="fasta,fasta.gz" label="Genomic sequence (FASTA)" help="Genomic contigs / scaffolds to be aligned against in FASTA format" /> - <param argument="-k" name="kmer_size" type="integer" min="1" value="6" label="K-mer size" /> - <param argument="-s" name="submer_size" type="integer" min="1" value="4" label="Submer size" help="Submer size (density: 1/(2*(kmer_size-submer_size)+1))" /> - <param argument="-b" name="bits_per_block" type="integer" min="1" value="8" label="Bits per block" /> + <param argument="-k" name="kmer_size" type="integer" min="1" value="6" label="K-mer size for genome-wide indexing" /> + <param argument="-b" name="bits_per_block" type="integer" min="1" value="8" label="Number of bits per bin" help="Miniprot splits the genome into non-overlapping bins of 2^8 bp in size" /> + <param argument="-M" name="modimisers" type="integer" value="1" label="Sample k-mers at a rate 1/2**INT" help="Increasing this option reduces peak memory but decreases sensitivity" /> + <param argument="-L" name="min_ORF" type="integer" value="30" label="Minimum ORF length to index" /> </when> <when value="preindexed"> <!-- refine the datatype here once Miniprot index data type is in Galaxy --> @@ -67,6 +80,7 @@ <param name="output_format" type="select" label="Output format" > <option value="gff" selected="true">GFF3</option> <option value="paf">PAF</option> + <option value="gtf">GTF</option> </param> <conditional name="adv"> <param name="options" type="select" label="Advanced options"> @@ -76,24 +90,37 @@ <when value="yes"> <section name="mapping" title="Mapping"> <param argument="-S" name="no_splicing" type="boolean" truevalue="-S" falsevalue="" checked="false" label="No splicing" help="No splicing (apply -G1000 -J1000 -e1000)" /> - <param argument="-c" name="max_kmer" type="integer" min="1" value="50000" label="Max k-mer occurences" /> - <param argument="-G" name="max_intron" type="integer" min="0" value="200000" label="Max intron size" /> - <!-- the -w option is mentioned in the help text but apparently not implmented: https://github.com/lh3/miniprot/issues/12 --> - <!-- <param argument="-w" name="log_gap_penalty_weight" type="float" value="0.75" label="Log gap penalty weight" /> --> - <param argument="-n" name="min_syncmers" type="integer" min="1" value="5" label="Minimum number of syncmers in a chain" /> + <param argument="-c" name="max_kmer" type="integer" min="1" value="20000" label="Max k-mer occurences" /> + <param argument="-w" name="log_gap_penalty_weight" type="float" min="0" max="1" value="0.75" label="Log gap penalty weight" /> + <param argument="-n" name="min_syncmers" type="integer" min="1" value="3" label="Minimum number of syncmers in a chain" /> <param argument="-m" name="min_chain_score" type="integer" min="0" value="0" label="Minimum chaining score" /> <param argument="-l" name="second_round_kmer_size" type="integer" min="1" value="5" label="K-mer size for second round of chaining" /> <param argument="-e" name="max_extension" type="integer" min="0" value="10000" label="Max extension for second round of chaining" /> <param argument="-p" name="score_ratio" type="float" min="0" max="1" value="0.7" label="Minimum secondary-to-primary score ratio" /> - <param argument="-N" name="max_secondary_alignments" type="integer" min="0" value="50" label="Max secondary alignments to consider" /> + <param argument="-N" name="max_secondary_alignments" type="integer" min="0" value="30" label="Max secondary alignments to consider" /> + <conditional name="intron_size"> + <param name="mode" type="select" label="Maximum intron size"> + <option value="manual" selected="true">Manual</option> + <option value="auto">Auto (3.6*sqrt)</option> + </param> + <when value="manual"> + <param argument="-G" name="max_intron" type="integer" min="0" value="200000" label="Maximum intron size" /> + </when> + <when value="auto" /> + </conditional> </section> <section name="alignment" title="Alignment"> <param argument="-O" name="gap_open" type="integer" min="0" value="11" label="Gap open penalty" /> <param argument="-E" name="gap_extension" type="integer" min="0" value="1" label="Gap extension penalty" help="A k-long gap costs open_penalty+k*extension_penalty" /> - <param argument="-J" name="intron_open" type="integer" min="0" value="31" label="Intron open penalty" /> - <param argument="-C" name="non_canonical_splice" type="integer" min="0" value="11" label="Penalty for non-canonical splicing" /> - <param argument="-F" name="frameshift" type="integer" min="0" value="17" label="Frameshift penalty" /> - <param argument="-B" name="end_bonus" type="integer" min="0" value="5" label="End bonus" /> + <param argument="-J" name="intron_open" type="integer" min="0" value="29" label="Intron open penalty" /> + <param argument="-C" name="non_canonical_splice" type="float" value="1" label="Weight of splice penalty; 0 to ignore splice signals" /> + <param argument="-F" name="frameshift" type="integer" min="0" value="23" label="Frameshift penalty" /> + <param argument="-B" name="end_bonus" type="integer" min="0" value="5" label="Bonus score for alignment reaching query ends" /> + <param argument="-j" name="splice_model" type="select" label="Splicing model for the target genome" help="2=mammal, 1=general, 0=none" > + <option value="O" >None: No splicing model (0)</option> + <option value="1" selected="true">General: Optimal splicing sequence: '|GTR...YAG|' (1)</option> + <option value="2">Mammal: Optimal splicing sequence: 'G|GTR...YYYNYAG|' (2)</option> + </param> </section> <section name="output" title="Output"> <param argument="-P" name="prefix" type="text" label="Prefix for IDs in GFF3 output" value="MP"> @@ -106,6 +133,10 @@ </param> <param argument="-u" name="print_unmapped_proteins" type="boolean" truevalue="-u" falsevalue="" label="Print unmapped proteins" checked="false" /> <param argument="--outn" name="outputs_per_query" type="integer" min="0" value="100" label="Outputs per query" help="The number of outputs will be the minimum of this and the max secondary alignments option" /> + <param argument="--aln" name="output_residue_alignment" type="boolean" truevalue="--aln" falsevalue="" checked="false" label="Output residue alignment" help="Only for GFF output" /> + <param argument="--outs" name="output_score_least" type="float" min="0" max="1" value="0.99" + label="For each protein, only output alignments with a score higher than 'best_score' multiplied by this value"/> + <param argument="--outc" name="output_fraction_query" type="float" value="0.1" label="Output if at least this fraction of query is aligned" /> </section> <param argument="-K" name="query_batch_size" type="integer" min="1" value="2000000" label="Query batch size" /> </when> @@ -117,6 +148,7 @@ <data name="output_alignment" format="gff3" label="Miniprot on ${on_string}"> <change_format> <when input="output_format" value="paf" format="paf" /> + <when input="output_format" value="gtf" format="gtf"/> </change_format> </data> </outputs> @@ -129,8 +161,8 @@ <param name="protein_fasta" value="input_query.fasta.gz" ftype="fasta" /> <output name="output_alignment" ftype="gff3"> <assert_contents> - <has_text text="ID=MP000001;Identity=1.0000;Positive=1.0000;Target=tr|O06302|O06302_MYCTU 1 126" /> - <has_text text="ID=MP000359;Identity=0.9811;Positive=1.0000;Target=tr|V5QPR5|V5QPR5_MYCTU 1 53" /> + <has_text text="ID=MP000001;Rank=1;Identity=0.3420;Positive=0.5104;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375" /> + <has_text text="ID=MP000066;Rank=1;Identity=0.3613;Positive=0.5178;Target=sp|P9WQE5|PPSB_MYCTU 1 1214" /> </assert_contents> </output> </test> @@ -147,7 +179,7 @@ <has_text text="cs:Z::29*agcG:3*gtgA:5*ccgA:9*accS:1*gccV:4*cagL:1*gtcS:3*gtcA*gtcI*accA*gccG:8*gccS:2*ggtA:5*gccI*agcG:1*ctgA:4*gccV:5*gggL:1*gtgS:2" /> </assert_contents> </output> - </test> + </test> <test expect_num_outputs="1"> <conditional name="db"> <param name="dbtype" value="fasta" /> @@ -165,6 +197,27 @@ </assert_contents> </output> </test> + + <test expect_num_outputs="1"> + <conditional name="db"> + <param name="dbtype" value="fasta"></param> + <param name="genomic_fasta" value="input_genome.fasta.gz" ftype="fasta"></param> + </conditional> + <param name="protein_fasta" value="input_query.fasta.gz" ftype="fasta"></param> + <param name="output_format" value="gtf"></param> + <conditional name="adv"> + <param name="options" value="yes"></param> + <param name="second_round_kmer_size" value="32"></param> + </conditional> + <output name="output_alignment" ftype="gtf"> + <assert_contents> + <has_text text="NC_000962.3" /> + <has_text text='transcript_id "MPT000004"; gene_id "MPG000004"' /> + </assert_contents> + </output> + </test> + + </tests> <help><![CDATA[ miniprot_ rapidly aligns a protein sequence against a genome with affine gap penalty, splicing and frameshift. @@ -177,18 +230,6 @@ .. _miniprot: https://github.com/lh3/miniprot .. _overview: https://github.com/lh3/miniprot#algorithm-overview - ]]></help> - <citations> - <citation type="bibtex"><![CDATA[ - @misc{Li2022, - author = {Li, Heng}, - title = {miniprot}, - year = {2022}, - publisher = {GitHub}, - journal = {GitHub repository}, - howpublished = {\url{https://github.com/lh3/miniprot}}, - commit = {b442b7a6b60dbd15f460ea9af75fa0b7293d4a8c} - } - ]]></citation> - </citations> + ]]></help> + <expand macro="citation"></expand> </tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.gff Thu Apr 06 09:20:48 2023 +0000 @@ -0,0 +1,1308 @@ +##gff-version 3 +##PAF tr|I6YGH7|I6YGH7_MYCTU 377 0 375 - NC_000962.3 699930 326271 327381 396 1158 0 AS:i:516 ms:i:512 np:i:197 da:i:9 do:i:3 cg:Z:17M1D20M14I2M1I24M1I195M4D61M6D40M cs:Z:*gtaM:1*atcL*gacN*ctgF:1*cccD*tctE:1*gagL*aagA*ctgF*cggQ:1*cagE*atcV:1-gcc:1*gtcF*gccL:1*ctgA*aagN:1*atgA*ccgS*cgaI*gagP*ccgT*cgcK*actS*gtcY*gcgD*atcN:3+FAQHRYWDRVLFDA:1*tggL+S:1*ctgI*ccaT*tatW*ctgP*cccA:1*ccgY*tggG:2*gccD:1*agcP*ccgL*gtcL*gagH*cagW:1*atcV*atcF*gccE*cagE:1+Y:1*accR:2*cggA*gtcP*aagG:1*ccgA*cagS*attA*gccN*atcG*gcgT*acgS*tggM*atcL*gtgA:1*tcgT*atcL*gtcF:1*ttcH:2*gacA*aatE:1*aagL*cagD:1*ctcI:2*ccaK*acgM*ttcA*cgaS:1*gacE*attQ*ttcI:1*tgcA:1*ctgA*ttcW:3*ggcE*gcgS:7*gcaR*accS*aagT:1*accS*cggK:5*cgcL*atcL*actN:5*accS*accS*ggcR:1*cagP*tacF*tccA*caaD*tggM:1*gcgF*ctgG:1*gcgF:1*acgS:2*tcgA*gcgV*cccE*aagR:1*aacR:1*atcL:3*ctgM*ctgF:1*atgL:1*agcA*gaaK:2*caaT:1*aagR:1*ctgI*cgcA*gagQ:1*acgG:1*aagD*gagT*tttG:1*aacG*accE*gtcI*tacF:8*gagR*ttgD:1*ctcI:1*gagA*gtgP:1*cggD:2*gagR*gtcA*agcA*cgcM*aacS:1*ctgS*acgS*gccN:2*gtgG*tcgM*atcS*ggcL*ggcR:1*gatP*tcgA*accR:2*cccA*accS*ctgA*ggcE*gagR*ttcL:1*gacQ*ttcL*gttW*cgcK:1*tacR*cgtG*ttcS*gaaP*ggaP*cagE:1-gaccaggtcgcg*cgaA*cacD:1*gccV*gggA*caaD*ttgA*atcW*gccI*gagK*ggcA*cacQ:1*accY*aagR:1*ctcQ*aacT*ttgF*cgcG*tccT*acgV*ctgT*ttgR*acgL*ctgA:3*gacE*ccgL*atgG:1*ccgE*gcgS*gcgS*atcV*tccT:1*ctgV*ttgF*tccW*atgS*cgcE*accL*ggcD*cagV*ggtH*tatL*gccH*gaaQ*ttcT:1*gtgL*tcgD*tccL*tttR:1*accA:1*gcgG-gtgatcggcgacacagag*cgaE:1*cccA:1*aagP:1*ggcT:1*tacG:2*gccF*agcA*cggL*gccG*accG*accP:2*gggA:2*tcgN:1*gtcI:1*ctcR:12*gacE +NC_000962.3 miniprot mRNA 326272 327381 512 - . ID=MP000001;Rank=1;Identity=0.3420;Positive=0.5104;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375 +NC_000962.3 miniprot CDS 326272 327381 512 - 0 Parent=MP000001;Rank=1;Identity=0.3420;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375 +##PAF sp|O05779|FTSE_MYCTU 230 2 213 + NC_000962.3 699930 81684 82323 219 642 0 AS:i:300 ms:i:300 np:i:116 da:i:-1 do:i:342 cg:Z:13M2D66M1D121M1I10M cs:Z:*ctcI*agcT*attL*cagD*aacH*ctcV*gtcT*gttK*gagQ:1*tacK:1*ggtS-ggatac:1*cttR*aggP*ccgA*atcL*aacD*ggtD*ttgI:1*ctcV*gacK*gtgI*gcaD*gccK:1*tcgE*ttgF:1*atgF:1*ctcI:4*tgcS:2*acgS:1*ctgF*cttM*tccR*tgtL:1*ggcL*ggcA*attA*ctgE*cgcT:1*aagT:2*gcgD*atcV*aagR*ttcV*gacS*gaaK*gtcF*gacH*atcV*acgN*acgK:1*caaR:1*gccR*gagH*ctgV*gcgP*aacK*tacL:1*cgtQ-aac*aagV*gtcI:1*atcC:3*gcgD:1*aatR:1*gtgL*cccQ*agcQ*ctgK:1*gctV*gtcY*gagD:2*atgA*gtgF*ccgA:1*cgcE*tcgV*gccI:1*atgK*tcaR*cgcT*aggD:1*tcgI*cgtN:1*cgtV*gccV*gaaP:1*ctgV:1*gcgE*cgcT:1*aatG:1*gcgS*gaaG*cgaK*atgA:1*catR*cgaL:1*ggtD*gatE:4*cagE:5*gtgI:3*attF*gcgV*ctgN*gatR:1*ccaL*ctgV*atcL:6*gcaG*cacN:2*ttcP*atcE*cagT*gtgS*gagR*gagD*gtgI*ctgM*cggD:1*atcL*cgcE*gaaR*ctgI*gccN*gatR*ggcT*gagG*cgtT*gtgT:1*gtgL*gtcM:4*agcH*aggH*atgI*ttgV+D*ccgS:1*gccR*gatQ:5*acaS +NC_000962.3 miniprot mRNA 81685 82323 300 + . ID=MP000002;Rank=1;Identity=0.3411;Positive=0.5421;Target=sp|O05779|FTSE_MYCTU 3 213 +NC_000962.3 miniprot CDS 81685 82323 300 + 0 Parent=MP000002;Rank=1;Identity=0.3411;Target=sp|O05779|FTSE_MYCTU 3 213 +##PAF tr|O06302|O06302_MYCTU 126 0 126 + NC_000962.3 699930 423638 424016 378 378 0 AS:i:620 ms:i:620 np:i:126 da:i:0 do:i:0 cg:Z:126M cs:Z::126 +NC_000962.3 miniprot mRNA 423639 424019 620 + . ID=MP000003;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06302|O06302_MYCTU 1 126 +NC_000962.3 miniprot CDS 423639 424016 620 + 0 Parent=MP000003;Rank=1;Identity=1.0000;Target=tr|O06302|O06302_MYCTU 1 126 +NC_000962.3 miniprot stop_codon 424017 424019 0 + 0 Parent=MP000003;Rank=1 +##PAF sp|O06391|Y525_MYCTU 202 0 202 + NC_000962.3 699930 616222 616828 606 606 0 AS:i:1071 ms:i:1071 np:i:202 da:i:0 do:i:0 cg:Z:202M cs:Z::202 +NC_000962.3 miniprot mRNA 616223 616831 1071 + . ID=MP000004;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O06391|Y525_MYCTU 1 202 +NC_000962.3 miniprot CDS 616223 616828 1071 + 0 Parent=MP000004;Rank=1;Identity=1.0000;Target=sp|O06391|Y525_MYCTU 1 202 +NC_000962.3 miniprot stop_codon 616829 616831 0 + 0 Parent=MP000004;Rank=1 +##PAF tr|O06394|O06394_MYCTU 529 0 529 + NC_000962.3 699930 618304 619891 1587 1587 0 AS:i:2736 ms:i:2736 np:i:529 da:i:0 do:i:0 cg:Z:529M cs:Z::529 +NC_000962.3 miniprot mRNA 618305 619894 2736 + . ID=MP000005;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06394|O06394_MYCTU 1 529 +NC_000962.3 miniprot CDS 618305 619891 2736 + 0 Parent=MP000005;Rank=1;Identity=1.0000;Target=tr|O06394|O06394_MYCTU 1 529 +NC_000962.3 miniprot stop_codon 619892 619894 0 + 0 Parent=MP000005;Rank=1 +##PAF tr|O53632|O53632_MYCTU 249 0 249 + NC_000962.3 699930 133019 133766 747 747 0 AS:i:1267 ms:i:1267 np:i:249 da:i:0 do:i:0 cg:Z:249M cs:Z::249 +NC_000962.3 miniprot mRNA 133020 133769 1267 + . ID=MP000006;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53632|O53632_MYCTU 1 249 +NC_000962.3 miniprot CDS 133020 133766 1267 + 0 Parent=MP000006;Rank=1;Identity=1.0000;Target=tr|O53632|O53632_MYCTU 1 249 +NC_000962.3 miniprot stop_codon 133767 133769 0 + 0 Parent=MP000006;Rank=1 +##PAF tr|O53651|O53651_MYCTU 229 0 229 + NC_000962.3 699930 237205 237892 687 687 0 AS:i:1144 ms:i:1144 np:i:229 da:i:0 do:i:0 cg:Z:229M cs:Z::229 +NC_000962.3 miniprot mRNA 237206 237895 1144 + . ID=MP000007;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53651|O53651_MYCTU 1 229 +NC_000962.3 miniprot CDS 237206 237892 1144 + 0 Parent=MP000007;Rank=1;Identity=1.0000;Target=tr|O53651|O53651_MYCTU 1 229 +NC_000962.3 miniprot stop_codon 237893 237895 0 + 0 Parent=MP000007;Rank=1 +##PAF tr|O53680|O53680_MYCTU 193 0 193 + NC_000962.3 699930 330421 331000 579 579 0 AS:i:1032 ms:i:1032 np:i:193 da:i:0 do:i:0 cg:Z:193M cs:Z::193 +NC_000962.3 miniprot mRNA 330422 331003 1032 + . ID=MP000008;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53680|O53680_MYCTU 1 193 +NC_000962.3 miniprot CDS 330422 331000 1032 + 0 Parent=MP000008;Rank=1;Identity=1.0000;Target=tr|O53680|O53680_MYCTU 1 193 +NC_000962.3 miniprot stop_codon 331001 331003 0 + 0 Parent=MP000008;Rank=1 +##PAF sp|O53901|PKS5_MYCTU 2108 15 882 + NC_000962.3 699930 486051 488622 1005 2634 0 AS:i:1369 ms:i:1366 np:i:465 da:i:321 do:i:1314 cg:Z:36M6I6M5I57M1D16M1D199M4D68M1I28M1D18M2I29M1I46M2D62M2D91M4I133M2I57M cs:Z::6*gtgM:3*tttL:2*gatG:2*ggcS:1*gaaD:3*gacE*tttA:1*accL*gagR*aagG*aagD*tgtD*gcgL*ataV:1*gcgE*tatI:1+ADRWDI:1*cgtE*gggY*ttcY*acgD*aatP+EPGVP*gctG*ggaR:1*ttcD*gcgC*gagK*tccW:1*ggcA*tttY:1*aagD*gatN:1*gcgG*ggtD:2*aatP*agaE:2*gatG:1*ccgG*ccgE*gacK:2*ctgI*cgaA*atgI:3*caaH:5*gtcT:4*ttaM:2*gcaG:1*attL*attT:1*gagN*tcaQ*ttaM-aga*cttA:8*gtgL*tcgV*tcaH:3*gtcI-cgg:2*tcaH:1*agcD*gctN:1*caaT*aagF*tctE*actG*attP*tggY*gatG:3*ggtT*tctN*tcgA*agtC*attF*attA*gccS*aatG:1*atcV*tcaA:1*tttA*ctcM*gatG*attL:3*tccA:1*gtcT*attV:6*tccG:1*gtcT:1*gtgI:7*agtH*accD*tggG*gacE*tgcS:4*gtcA:2*acgV*aatY:1*cttM*attL*tcaE:1*gaaR*ccaR*tggF*ggtA*gggS*tttG*aggS*gaaA*gcgL:1*atcM:2*cagA:2*tgcR:5*aaaV:4*atgF:1*cgcS:4*ggaV*gttM*atcL*gtgA:1*cagK:2*agtP:2*cgcL*cttA*gagD:1*cggD:4*attV*ctgI*acgR:1*tcaT:1*gtcA:4*aagH*tccT*aacV*ggtN:1*atgA*gcgT:1*aatS*cctR:3*attV*ggtA*gttA*cttY*gaaR*aatE:1*tgcL*aagD*agcV:1*cgcG:3*ctgA*gaaT*atcV:1*tacM:5*accP:2*tcgP*ttaV:2*aggP:2*gcgY*cacA*gccS:1*ggcA*atgE:1*tttY:1-cgcaagagaccg*ggaN*tctD:2*ctgC*atgA*atcL*gggA:1*atcV:1*ccgT:1*atcF:2*ctgT*gaaQ*ggtS:3*atcA*gccL:2*atcM:4*atgA*gttL*gagQ*cgtH:1*tcgV*ctgV*cttP*ccgQ*agcN*gggL*gggH:2*gagA*ccaL*aatP*ccaD*gctK*atcL*ccaA*ttcA*acgI:1*ttgT*ggcN:1*agaF:1*gtaP*gacQ:1*cttI*cagT*gagP:2+G*gtgA*gtgD*gcgQ*ggtE*cggT:4*gggA:3*ttcY:1*tttM*ggcT:3*gcgV:1*gtgA:3*gaaQ:1-ggt*tcgP:1*gggP:1*gacP*acgE*gttS*tcgG*ggcA*cgcP*gcgG:1*gttT*ggcP*ggtA*tccT*ggtP:1+ID:1*gtgA*gtgL*gcgL*tggF*gtgA*attL:1*gggA*aagS*acgS*gctQ*tcgD:2*gctR*gctQ*cagT:1*ggtA:2*gggA*cggD*tatW:1*cggD:1*cggQ+G:1*gcgE:1*gatA*gttP*gttA:1*gtgL*gggA:1*tcgT:1*gtgA*agcR*acgR:1*tcgG*gtgH*tttR*gatP*catV:1*gcgT*gtgA:1*gtcL*ggcA*cagA:1*cgcT*gatA:2*ctgT*gctE*gggA:1*gctR*gggE:1*gttA*gctT:1*cggE:1*gagP-gctggg*gtgY*gtcP*tgcP*ggtA:2*aagQ*ccgD*gcgD*ggcR*aagG*acgP*gctV*tttW:2*gccS:6*ctgA:3*agcA*gagD:1*tatL:1*gccT*tacE:4*gagA*gccT*ctcI*gatA:1*gtgI*gtgE*gacP*gagL*ttgI*gacA*cggA*cacE*ctgS*cggG*tatF*ccgS*ctgV*cgcT*gatE*gtgA*atcM*tggT*gggA-cacgac*caaP*gatE*ctgV*ttgV*aatT*accG*accI*gaaD*ttcR*gccV:2*gcgT:3*gtgM*gagQ:3*tatA*cggA*ctgT*ctcM*atgK:1*tggY:2*cggA:2*ttgA:1*ctgI:3*gtgL:2*ttgS:3*cacV:7*ccgE:1*gcgG*gcgV*atgR*ctgV*gtgI*gccC*gcgR:1*ggaS*cggA:2*cagT*gcgR*ttgI*cccA*gccG*ggcA:3*tttA*gcgS:1*cagE*gccL*cgtP*gaaA*gacQ*gagQ:1*gcgL*ccgS*atgE:1+MARG*gggV*cacN:1*gtgA*agcV*atcV:1*gcgV:1*aatA*ggtS:1*gctQ:1*gtgT:2*tctG:2*cacT*gatQ*gcgT:1*agcR*gcgD*atcL*gctV*gatA*cggA*ctgW*cgcE*ggcQ*cagR*ggcD*cgtV*cggL*gtcA*cacR*cggE*ttgV:2*tcgD*catV:1*tttS:2*gcgP*ttgQ*atgV*gagD:1*atgI*atcL*gctD:1*ttcL*acaA*gccE*gttA*gcgL:2*ctgI:1*gtgP*ggcL*ttgQ:1*acgE:2*gtcY*attY:1*aatA*gtgT*accS*gggF*cagD*ttgP*gtgR*gccE*gacE*gacP*ttcY*gccC*tcaD:1*gatY:2*gccV*cggD*catN*atcL:1*gcgH*gtgT:3*ggcA*gacA*agtA:1*cgtQ*agtA:1*cacL*tgcE*gccD:1*gccY*agtR*cgtV:1*atcT:1*gtcL*gggT:1*ggtH*ggcP*ggcL:2*tcgH*ttgA*atcV*gagD+QT:1*tcgR*ctgS*gccL:1*gcgM*cagS*atcA*gtgA*tcgA*gtgL*cccA*acgG*ctgM:1*aaaR*gatE*cggQ:1*gaaL:1*gtcH*agtG*gtgL*atgR*acgA*gcgL:1*gccG*cagD*ggcL*ttcY*gtcA*tcgA:1*atgA*ggcA*ctgV:1*tggF:1*tcgV*gtgL*tttY*tccP*gggT*tacG:1*cccL*aagI*cggN*gtgA*gagP:3*tatW +NC_000962.3 miniprot mRNA 486052 488622 1366 + . ID=MP000009;Rank=1;Identity=0.3815;Positive=0.5296;Target=sp|O53901|PKS5_MYCTU 16 882 +NC_000962.3 miniprot CDS 486052 488622 1366 + 0 Parent=MP000009;Rank=1;Identity=0.3815;Target=sp|O53901|PKS5_MYCTU 16 882 +##PAF tr|O69709|O69709_MYCTU 131 11 131 - NC_000962.3 699930 656840 657443 162 394 0 AS:i:174 ms:i:209 np:i:72 da:i:27 do:i:828 cg:Z:33M11D34M212V22M1F30M cs:Z::3*gtcL:8*ctgT:4*cggY*atcL*atcK*gaaT*cgcM*aacQ:1*cagA*ctgK:1*tacF*accA:1*ctgV:1*aggA-cgtgcgcggatcggcggcacctgggatctgttc:3*ggcA*gtgI:4*agcD*atcL*ttcH:1*ctgF:1*tttY*cccE*tacF*gagK:2*accQ*cgcH:1*gaaK*ggcA*atcT:1*gacS*ggcA*gccD*cacA:1*cgcM*gaV~gt209ag-g:2*gaaG*gttR*tggS*cggL*cgcA:1*agtG*gcaD*tccR*ccaT*gcaL*ctgR*gccH:1*ggaR*tctT*ggaR*ctaH:1*cggE-c*aagL*aagR*atcM:1*gtgI:10*atcV:1*tcgA*ctgM*accA*gacQ*cggT:1*gaaG*aagA:3*ctgP*cagK +NC_000962.3 miniprot mRNA 656841 657443 209 - . ID=MP000010;Rank=1;Identity=0.4112;Positive=0.5482;Frameshift=1;Target=tr|O69709|O69709_MYCTU 12 131 +NC_000962.3 miniprot CDS 657208 657443 147 - 0 Parent=MP000010;Rank=1;Identity=0.4177;Target=tr|O69709|O69709_MYCTU 12 78 +NC_000962.3 miniprot CDS 656841 656998 62 - 1 Parent=MP000010;Rank=1;Identity=0.4013;Frameshift=1;Target=tr|O69709|O69709_MYCTU 79 131 +##PAF sp|P0CL57|MAZE1_MYCTU 57 0 57 - NC_000962.3 699930 547346 547517 168 171 0 AS:i:298 ms:i:298 np:i:57 da:i:-1 do:i:0 cg:Z:57M cs:Z:*attM:56 +NC_000962.3 miniprot mRNA 547344 547517 298 - . ID=MP000011;Rank=1;Identity=0.9825;Positive=1.0000;Target=sp|P0CL57|MAZE1_MYCTU 1 57 +NC_000962.3 miniprot CDS 547347 547517 298 - 0 Parent=MP000011;Rank=1;Identity=0.9825;Target=sp|P0CL57|MAZE1_MYCTU 1 57 +NC_000962.3 miniprot stop_codon 547344 547346 0 - 0 Parent=MP000011;Rank=1 +##PAF tr|P95159|P95159_MYCTU 307 0 232 - NC_000962.3 699930 48376 49003 255 699 0 AS:i:347 ms:i:337 np:i:123 da:i:24 do:i:141 cg:Z:9M1D4M6I28M2I93M4I6M10I1M1I10M1I57M cs:Z:*ctcM*cccT*gttI:1*atcL:1*gtaL:1*ctgI-cag:1*cagN*cacF*gccS+YGTGVE*cccK*catL*tacF*cgcP*gccS:1*cgaI*gacA*gccQ*gtcA:1*cggE*tgcA:1*gacA*atcA:1*gtgY:1*atcS*gctL:1*accV*tggM:3*tttY+QL:1*ctcM*tacL:1*gacT:2*ggcQ:1*cacM*ttcL:1*tgcA*tggY:1*gtcA:3*tggL:1*gagT*caaA:1*tcgE*cacR*atcL*gaaQ*atcL:5*tgcG:1*tccT:2*aatS:1*gagT:3*gacK*atgI*gccI*cgtT:1*gtcL:1*cacV*atcV:1*ggcA:2*ctcA:5*tcgA:2*aaaF*cagE*aagL*gacE*tacH*gacR*gagQ*tacL:1*tacF*cggE:3*gcgF*ggcS*agcD:1*ctcF*gacN*gacR:1*gcgE*gctE:2+QILE:1*cggM*atcV:1*gcgG*cggE+RPTFFGDWYT*cttT+E*ggcS*aagA*ctgM*aacA*ccgE:1*ccgR*acaY:2+R:2*gtgI:7*cgtK:2*ctgF*cgaA*ctgI*gtcA:1*gagR*tatF:2*atcH*tggL*cacN*agcI*tttV*accA:1*gggV:1*agcE*tacL*ctaP*gcgR:1*tcgM*gccR*gtgA:1*agcA*acgA*cacR:1*tcgD*accE*gtcA:2*aacD*ccaR*gcgS:1*atcL*gaaQ*cgcT:1 +NC_000962.3 miniprot mRNA 48377 49003 337 - . ID=MP000012;Rank=1;Identity=0.3648;Positive=0.5279;Target=tr|P95159|P95159_MYCTU 1 232 +NC_000962.3 miniprot CDS 48377 49003 337 - 0 Parent=MP000012;Rank=1;Identity=0.3648;Target=tr|P95159|P95159_MYCTU 1 232 +##PAF tr|P95203|P95203_MYCTU 134 0 134 + NC_000962.3 699930 474939 475341 402 402 0 AS:i:731 ms:i:731 np:i:134 da:i:0 do:i:0 cg:Z:134M cs:Z::134 +NC_000962.3 miniprot mRNA 474940 475344 731 + . ID=MP000013;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95203|P95203_MYCTU 1 134 +NC_000962.3 miniprot CDS 474940 475341 731 + 0 Parent=MP000013;Rank=1;Identity=1.0000;Target=tr|P95203|P95203_MYCTU 1 134 +NC_000962.3 miniprot stop_codon 475342 475344 0 + 0 Parent=MP000013;Rank=1 +##PAF tr|P96267|P96267_MYCTU 209 0 209 - NC_000962.3 699930 507134 507761 627 627 0 AS:i:1084 ms:i:1084 np:i:209 da:i:0 do:i:0 cg:Z:209M cs:Z::209 +NC_000962.3 miniprot mRNA 507132 507761 1084 - . ID=MP000014;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96267|P96267_MYCTU 1 209 +NC_000962.3 miniprot CDS 507135 507761 1084 - 0 Parent=MP000014;Rank=1;Identity=1.0000;Target=tr|P96267|P96267_MYCTU 1 209 +NC_000962.3 miniprot stop_codon 507132 507134 0 - 0 Parent=MP000014;Rank=1 +##PAF sp|P96285|PKS1_MYCTU 1616 0 1017 + NC_000962.3 699930 487371 596021 1302 3234 0 AS:i:1363 ms:i:1536 np:i:555 da:i:267 do:i:60 cg:Z:38M1D407M3I17M2I12M9632N10M2D5M1I30M8D8M7D4M11690N18M1D28M17I7M3I33M1D32M2I23M1I12M19575V1M3I27M4D19M25459N4M1D4M3I38M2D14M11D26M1D9M5984U28M11D7M33214N16M2I10M5I17M2I16M11D51M cs:Z:*gtgM:2*gggA*aagR*acgS:1*tcgE:2*gctT:6*gggM*cggA*tatH:1*cggQ:1*cggN:1*gcgG:2*gttP*gttI:3*tatC:2*gtgA:1-acg:4*gatE:7*cagA*actS:1*gatE*gagQ:1*ctgI:5*gtgL*gttA:2*cggE:1*gagG:3*gtcA*tgcV:1*gttQ*ggcP*aagG*ccgS*gcgV:3*gctV*tttV:2*gccP:3*tcgA:1*tggR*ctgI:3*agcR:3*gctG*gccE*tacL:4*gagQ:1*ctcF:3*gtgA:8*tatL:8*cacA:1*caaA:3*aatD*accS:14*ctgS*tatF*cggA*ctgV:1*atgR*tcgD:3*cggL:1*ggtD*ttgF:1*ctgM:11*gtcA:2*gcgV:1*tgtT:1*ccgA:6*gccV:15*tttV:2*cagA:1*cgtS:4*gcgE:1*atgL:2*cacE*gatG:1*agcG:3*gtcI:1*ggtA:1*gctE:7*cacQ*gatA:1*gtgA*agcN:5*ctgF*cgcA*ggcA:6*cggQ:9*gcgP:5*atcL*gctE:2*acaA*gccR:3*gaaR*ctgV*tctQ*gtgA*ggcR*ttgE:1*acgQ*atcL*ccgG*gtcL*attV:5*cagE:1*gtgA*gccG*gacP:2*gccG:2*gatQ:2*gccV*cggD:1*atcV:1*gcgR*gtgP:3*ggcA:2*gttA:1*agtH*gccL*cacQ*tgcT*gccL:2*agtT*cgtH:3*gtcA:3*ggcS:3*tcgG*ttgS:2*gcaQ:3*gacP:1*cagE*atcA*gtgM*tcgV:1*cccS*acgM:1*cgcG:5*ccgL*gtcA:1*gtgA*atgL*acgG:2*gccG:1*ggcV:1*gtcT*tcgT:1*atgV*ggcP*ctgV*gatQ:1*gccS*tcgA:2*tccA:1*tacS*cggG*cccG*aagR:2*gagQ:7*catR*caaR*aagR:2*ctcE*gcaT:1*gccG*ccaA*tcgD*gtcG*agcP*gacA*cccD*accA:1*gccG*ggcL*cagG*atcL:2*agcT*gatE*ggtH+ALL:2*gaaV*ctcV*ttgE*gcgR*tccP*tccD*gggS*tttD*gccE*gccV*cggV:1*gccT:2+LS*tcgL:2*gagQ*caaP*ctcW*gccL:1*gcgD*atcH*gagV:1~gt9632ag*ttgN:1*gcgV*gctV:1*tccF*catP:1*tttA:1-cagtgc:5+I*gaaR*tgcA:1*ggtD*agcE*atcV*gtcG*ctcC:1*tttL*accI*cagE*tgcE*cacL*ctgV*agtL*ggcA*agcA:1*ataL:1*gccM*gacH*ggaP*gatG:2*attV*gatQ*ccgV-gtcgttggcctgccgccagcgcac:1*cagV*ctgV:3*ctgA*cagD-atcgggtttgtcgacggcgtg*gcgE*gcgS:2~gt11690ag:1*ggcA*gccV*ggtS:1*cacY*ggaS:1*cccG:1*gccQ*gcgS*ttaQ:1*ctcW*ttcL*catL*cgcN-ctc:2*ttcG*ctcM*gagL*gacG*ccgV*gttA*gtgA*gtgA*gttE*attT*tgcP*caaM:1*atgL:1*ggtV*ggcW*gatP*aacP*cagE:1*gacA*cggE*ccaS:2+ISDGYAQLAERGYAYGP*gagA:1*gagQ:1*agcL*gagV*tgcA+IWR:1*cagG*accS*tccE*gtaL*gtaF*ggcA*cagE:1*ctcV*tggA:1*cggG*aatE*cttA*cacG*ttgV:1*gcaV:2*gagM*gttG*catM:1*aatP*agtA*ctcV*cgcL*ttcD:1*gatV:1-agc:1*ggcA:1*acgG:1*agaA*tgtV*cgcE*tcgK:1*cgtQ*attA*cttS*ttcT*ggcE*catT*catR:3*agtC*aacW*gaaR:1*tttV*gccS*gttL*gtgH*cagA:3+GR:1*accR*gtcA*gggR*ggtF*atgA:1*acgA*aggG*accA:2*ctgI*gcgS*gacV*cctD*ttgV*gctC*tcgD*tcgA*tttT*gccG:1+P*ttgV:3*cctR*ttaS:1*gagV*cttT*tacR*gccP*gtgI*ctT~gt19572ag-c:1+EQL:1*atgA*ggtA*acgV:1*ccgA*cagA*cggG*gcgG*gtgA:1*tcaD*tcgQ:2*gcgL*tccE*gacV*gccV:1*gcaS*cggP*ccgI:1*acgV*atcV:1-gagtagccgcta:1*tcgG*gatA*ggcN:1*cacS*aacA*aggP*gtgP*actA*tcgP*ctgV*cggS:2*aggD:2*cgcA~gt25459ag*gccG:1*ccgD:1-tga*gcgD*ctgA*accS*attV+VVW*tcgE*gccL*actE:1*tgcA:1*tcgG*atgQ:1*atgS:1*agaV*tcgV*cggG:1*aggV*gtcY*accA*tccA*ctgT*agtH*tcgT:1*accL*agcE*cggV*gtgL*tcgQ:2*gagL*gcaG*aagA*aacD*gtcR:1*tccA:1-ccgaac*actL*tcgV:1*atgL*cgcT*agcH*agcG*acgG*gccV*acgG*gtcL*agcA:1*cggE-acgtcgtgttcgatctggttcagatagctcggc*gagD:2*agcD*atcL*tggA:1*agcA:1*gccV:1*ctgG*aacM*ccgA:2*ttaA*cgcQ*agtA*tggE*cggN*accP*cgcG*gagR*ccgI*acgV-tag*gtcL*ttgI:2*caaD*ccgA*agcA:1*ccgD*gA~gt5981ag-ta*ggtS*tccV*agcL:1*cgcG*tcgV:5*gtgL:2*cgaG:1*gtgT:1*tatH:1*gcaP:2*gccS:1*gtaA*gcgP:1-gggtgctgggcatagcgggcgcgcgcgtaggtg*gcgL:1*tcaA*gtaL:1*acaA*tcgA~gt33214ag*catE*cggS*gacA*gtcW*gttR*gtaL:1*gtcA:1*gtaG:2*gcaT*gcgL*tttE*gagD+LV:1*gagQ*tccP*ctcC:1*gatE*ggcV:1*cgaA:1+LQAGQ*cacV:2*tgcA*cttV:1*ggtA*gccV*gtgG*cagV*gatN*ctcF*gccR:1*cagV*tctV:1+AL:1*gaaM:2*gtcG*gacQ*cgaA*ctcP*ggcP*gacL:2*cagE:3-taggccgagccggcgggcgatggtggccgcgag*ttcV:1*tggL*ggtE*agcT:1*gatP*cagE*ccaV*tacT*ctgD:2*ggcV*gtcG*cagD*gtgA*catV*ctgM:1*gagF*ttcL*gcgG:2*gtcG:1*gatL*cttA:1*ggcV:1*gatQ*ctcQ*gtcL:1*aatT*ctcR*ctcV*tccP:2*cacW*caaS*ctcF*cgcA*gacQ*ggaA*tcgA:1*ctcV +NC_000962.3 miniprot mRNA 487372 596021 1536 + . ID=MP000015;Rank=1;Identity=0.4026;Positive=0.5148;Target=sp|P96285|PKS1_MYCTU 1 1017 +NC_000962.3 miniprot CDS 487372 488796 1317 + 0 Parent=MP000015;Rank=1;Identity=0.5813;Target=sp|P96285|PKS1_MYCTU 1 479 +NC_000962.3 miniprot CDS 498429 498650 26 + 0 Parent=MP000015;Rank=1;Identity=0.2800;Target=sp|P96285|PKS1_MYCTU 480 537 +NC_000962.3 miniprot CDS 510341 510807 41 + 0 Parent=MP000015;Rank=1;Identity=0.2402;Target=sp|P96285|PKS1_MYCTU 538 713 +NC_000962.3 miniprot CDS 530380 530533 40 + 1 Parent=MP000015;Rank=1;Identity=0.2778;Target=sp|P96285|PKS1_MYCTU 714 764 +NC_000962.3 miniprot CDS 555993 556323 10 + 0 Parent=MP000015;Rank=1;Identity=0.2105;Target=sp|P96285|PKS1_MYCTU 765 862 +NC_000962.3 miniprot CDS 562305 562444 57 + 2 Parent=MP000015;Rank=1;Identity=0.3696;Target=sp|P96285|PKS1_MYCTU 863 898 +NC_000962.3 miniprot CDS 595659 596021 45 + 0 Parent=MP000015;Rank=1;Identity=0.2692;Target=sp|P96285|PKS1_MYCTU 899 1017 +##PAF sp|P9WFB9|VAPC2_MYCTU 141 0 141 + NC_000962.3 699930 364043 364466 420 423 0 AS:i:719 ms:i:719 np:i:141 da:i:-1 do:i:0 cg:Z:141M cs:Z:*gtgM:140 +NC_000962.3 miniprot mRNA 364044 364469 719 + . ID=MP000016;Rank=1;Identity=0.9929;Positive=1.0000;Target=sp|P9WFB9|VAPC2_MYCTU 1 141 +NC_000962.3 miniprot CDS 364044 364466 719 + 0 Parent=MP000016;Rank=1;Identity=0.9929;Target=sp|P9WFB9|VAPC2_MYCTU 1 141 +NC_000962.3 miniprot stop_codon 364467 364469 0 + 0 Parent=MP000016;Rank=1 +##PAF sp|P9WGT5|SDHL_MYCTU 461 0 461 - NC_000962.3 699930 76239 77622 1383 1383 0 AS:i:2354 ms:i:2354 np:i:461 da:i:0 do:i:0 cg:Z:461M cs:Z::461 +NC_000962.3 miniprot mRNA 76237 77622 2354 - . ID=MP000017;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGT5|SDHL_MYCTU 1 461 +NC_000962.3 miniprot CDS 76240 77622 2354 - 0 Parent=MP000017;Rank=1;Identity=1.0000;Target=sp|P9WGT5|SDHL_MYCTU 1 461 +NC_000962.3 miniprot stop_codon 76237 76239 0 - 0 Parent=MP000017;Rank=1 +##PAF sp|P9WHS5|HTPX_MYCTU 286 0 286 + NC_000962.3 699930 653878 654736 858 858 0 AS:i:1439 ms:i:1439 np:i:286 da:i:0 do:i:0 cg:Z:286M cs:Z::286 +NC_000962.3 miniprot mRNA 653879 654739 1439 + . ID=MP000018;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WHS5|HTPX_MYCTU 1 286 +NC_000962.3 miniprot CDS 653879 654736 1439 + 0 Parent=MP000018;Rank=1;Identity=1.0000;Target=sp|P9WHS5|HTPX_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 654737 654739 0 + 0 Parent=MP000018;Rank=1 +##PAF sp|P9WIF5|PG33_MYCTU 498 0 498 - NC_000962.3 699930 333504 336310 1011 1570 0 AS:i:1420 ms:i:1542 np:i:378 da:i:0 do:i:0 cg:Z:98M3I51M9D35M1I49M3D15M1I14M2I12M1I12M4I19M909U11M1D15M1D9M378V36M1D3M2D27M7D20M1F8M1I23M1D13M2I11M cs:Z::4*attV*gcgT*gcgI:2*gttA*atcL:2*gcgV:5*agtG*ctcI:2*agcT:1*agcG*gcgT:6*gccV*aacP:2*gcaT*ctgV*atgL:2*ggcA:5*acaA:1*atcM:4*ggcS*gccG:1*ggcA:10*cagA*gcgL:2*gccE:3*cagR:3*tccA:1*ggcA:1*gccS:7*gcgS*gtgA*tcgA:2+EGV:2*ccgV:2*gagA*ttcP*ttcA:2*aatL*accL:23*tggI:14*gtcM-aacggcggcgccggcggcaacggcggc*gccP:6*ggcA:2*atcF:10*gtcN*gccV*agcA:2*atcT*ggcA:1*tccF:5+A*aacG*gccG*atgL:1*ttcY:10*ggcR*gtaA*gtaG*gccG*ctcG*acgV:2*gccI:9*gccG:6*gccG:1*gtcA:2*gccV:2*ttcL-acgaacggc*agtA:1*ctcD*ggcA:1*gcgD:5*gccD:3+F:1*gccG*accV:2*gtcA:2*tccA:2*gccT:1*agcT+NV*tccT:8*gctN:2+L:6*accV:2*catV:2+DGVA:1*gccL*gacG*agcT*agcA*ttcP:2*gtcP:10*gG~gc906ag-gg*atcV:8*gtcI*tccG-ttg:1*atcV:1*tccN:2*accA:2*aacS:2*aacS*tccA*ataL-ggc*gtcL*gctW:1*atcD:5*cgA~cg375ag-c:2*gccV*agcG:1*cttT*gccT:5*accA:3*ggcA*gccG:2*ttcV:1*ttcA*cgcG:6*gggA*cacL:2*gcaG:1-ctt:1*agcG*atcV-cagcaa:5*gccN:2*aacT*ggcA:5*tccA*gccG:4*gccF:1*ggcF*agcG:2-aacgctctaggcgccggtacc:2*accA:2*gacL:2*cacK:2*gtgL*ttcI:1*aacD:5-t:3*tttN:1*gccT:1*accA+K:2*agcD:2*gtcA:2*aacG:1*gtgI:1*atcV:10-aaa*gccS:1*gccT*acgP*cccN:1*gccS*ggcA:4*ctgA+GG:3*gagK:2*ctcM:4 +NC_000962.3 miniprot mRNA 333502 336310 1542 - . ID=MP000019;Rank=1;Identity=0.6439;Positive=0.7223;Frameshift=1;Target=sp|P9WIF5|PG33_MYCTU 1 498 +NC_000962.3 miniprot CDS 335359 336310 1018 - 0 Parent=MP000019;Rank=1;Identity=0.6667;Donor=GC;Target=sp|P9WIF5|PG33_MYCTU 1 317 +NC_000962.3 miniprot CDS 334338 334452 109 - 2 Parent=MP000019;Rank=1;Identity=0.5789;Donor=CG;Target=sp|P9WIF5|PG33_MYCTU 318 353 +NC_000962.3 miniprot CDS 333505 333962 415 - 1 Parent=MP000019;Rank=1;Identity=0.6116;Frameshift=1;Target=sp|P9WIF5|PG33_MYCTU 354 498 +NC_000962.3 miniprot stop_codon 333502 333504 0 - 0 Parent=MP000019;Rank=1 +##PAF sp|P9WIJ3|DEF_MYCTU 197 0 197 - NC_000962.3 699930 517805 518396 591 591 0 AS:i:1042 ms:i:1042 np:i:197 da:i:0 do:i:0 cg:Z:197M cs:Z::197 +NC_000962.3 miniprot mRNA 517803 518396 1042 - . ID=MP000020;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WIJ3|DEF_MYCTU 1 197 +NC_000962.3 miniprot CDS 517806 518396 1042 - 0 Parent=MP000020;Rank=1;Identity=1.0000;Target=sp|P9WIJ3|DEF_MYCTU 1 197 +NC_000962.3 miniprot stop_codon 517803 517805 0 - 0 Parent=MP000020;Rank=1 +##PAF sp|P9WJX7|CHLEP_MYCTU 413 0 413 + NC_000962.3 699930 222288 223527 1239 1239 0 AS:i:2066 ms:i:2066 np:i:413 da:i:0 do:i:0 cg:Z:413M cs:Z::413 +NC_000962.3 miniprot mRNA 222289 223530 2066 + . ID=MP000021;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJX7|CHLEP_MYCTU 1 413 +NC_000962.3 miniprot CDS 222289 223527 2066 + 0 Parent=MP000021;Rank=1;Identity=1.0000;Target=sp|P9WJX7|CHLEP_MYCTU 1 413 +NC_000962.3 miniprot stop_codon 223528 223530 0 + 0 Parent=MP000021;Rank=1 +##PAF sp|P9WKI1|INO1_MYCTU 367 0 367 - NC_000962.3 699930 50023 51124 1101 1101 0 AS:i:1878 ms:i:1878 np:i:367 da:i:0 do:i:0 cg:Z:367M cs:Z::367 +NC_000962.3 miniprot mRNA 50021 51124 1878 - . ID=MP000022;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKI1|INO1_MYCTU 1 367 +NC_000962.3 miniprot CDS 50024 51124 1878 - 0 Parent=MP000022;Rank=1;Identity=1.0000;Target=sp|P9WKI1|INO1_MYCTU 1 367 +NC_000962.3 miniprot stop_codon 50021 50023 0 - 0 Parent=MP000022;Rank=1 +##PAF sp|Q6MX50|PG05_MYCTU 591 0 591 + NC_000962.3 699930 361333 363106 1770 1773 0 AS:i:3134 ms:i:3134 np:i:591 da:i:90 do:i:0 cg:Z:591M cs:Z:*gtgM:590 +NC_000962.3 miniprot mRNA 361334 363109 3134 + . ID=MP000023;Rank=1;Identity=0.9983;Positive=1.0000;Target=sp|Q6MX50|PG05_MYCTU 1 591 +NC_000962.3 miniprot CDS 361334 363106 3134 + 0 Parent=MP000023;Rank=1;Identity=0.9983;Target=sp|Q6MX50|PG05_MYCTU 1 591 +NC_000962.3 miniprot stop_codon 363107 363109 0 + 0 Parent=MP000023;Rank=1 +##PAF sp|Q79FH3|PPE37_MYCTU 473 0 473 - NC_000962.3 699930 307894 309547 585 1455 0 AS:i:710 ms:i:730 np:i:257 da:i:0 do:i:15 cg:Z:188M3I4M5I11M6I3M1I31M2D1M282U7M1D6M3D28M3I20M1D52M3D4M1D24M2I8M5I5M2I32M1D21M cs:Z::2*gccF:1*atcM:1*atgF:1*tcgV:4*cacP:2*ctgW:2*agcT:1*cctM:6*gtgA*tcgA:1*gagR*gggA:2*tcgA:1*agcA*atcA*gccQ:1*gcgT:1*acgI:1*gacT:3*gcgS*ctgV:6*ggcS*accS:1*gacQ:2*accS:1*gcgD*gttR*tacF:1*gccV:2*accQ:1*tatF*ctgR*gcgY:2*gtgT*cagH:1*agcA*gctT*aacV*agcA*gcgT:1*atgA:1*accA*cggA*caaH:4*accA*gccG:1*ggcT*accS:2*gccG*gcgG:7*ggcA:4*ctcM:2*gtgA:1*atgV*gcgT:5*atcV:9*tccA:2*gcgL:8*acgV:1*gccS*agcH:4*tcgA*accH*gcgE*gcgS:3*gcaT:1*cagS:1*accP:6*aaaT*gccS*aacA:1*ccgS*acaS:3*gacS+SFP*gagD:1*aacT*caaK+LILQL*gtcL*cagK*gaaD*tggF:1*caaE*tggL:1*cagR*aagY*atcL+AVELLP:1*tatP*accL+G:1*ttcL*tacI*aacA*aacQ:1*ataL*caaD*ccgW:2*aacS*tggF*ctgV*accS*aacG*ctcP*cccV:1*ttgT*caaF*gcgL*atgA*tttY*tccL*ggaV*tttL:2*tggL*ctgI-ccctcg*ctgY*gF~gt279ag-cc*gccG:1*ctgF:4-ctt*gccS:1*gcgV*agtL*gcaL*gcaP-ggcggcttc:3*tctT:5*gttG*ggcA*atcV*ccgS*ccaG*tccP:1*ccgG:1*gtcM*atcV*ccgE*ccgR:1*gcgH*gcgS*attD*gccG:1+SRQ:1*atcW:1*accA*cccA:1*ccaG*actV*ccaT*gccL*ccaV*gccG*ccgT*gccN:1*acgA:1*gtgL*accV*gcgT-ccg:2*ccgA:1*gggA:1*ccaT*ccgT*ccgS*ccgA*gtgA*accP*gccT*ccgA:1*ccgS*gtgT*accP:1*gccS*ggcS*ataA*caaA*agcQ*ttcG*gggL:1*ctgA:2*gacG*ctgP*aacD*tcgG*gcgE*gcgG*cagF*gccN*aggP*aagI:1*gtcK*ggcT:1*ggcA*gttL*cgaA*aagG*aagV:1*ccgT*gaaD-cccgacagc:1*gagA:2-gcg:2*gcgK*gcgL:1*gagG*gaaD:1*gttA:1*ccgS*cagS*cggA*cgtS*cggK*cggA*ccaT*aagR*atcL*aaaR*cagR*ctcR*ggcL:1+QH*ggtR*tacF:1*tacF:1*gatA*ttaD:1+GRLTM:1*gaaN:1*ggcP*cacE+MA:1*ccgV*acgA*ggtA*tcgG*cctN*caaR:1*gcgL*ggaD*accA:6*accI*cacP:1*gccS*agtA:2*caaS*gtcA*gcaT:2*atcT*acgH:1-ccc*aacG*gacG*gcgG:1*ggcA*ggcD*agcV*ccaL*cgcS*acgQ:2*atgL:1*ggaH:3*accG*gacS*tcaD +NC_000962.3 miniprot mRNA 307895 309547 730 - . ID=MP000024;Rank=1;Identity=0.4021;Positive=0.5299;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +NC_000962.3 miniprot CDS 308827 309547 568 - 0 Parent=MP000024;Rank=1;Identity=0.4883;Target=sp|Q79FH3|PPE37_MYCTU 1 253 +NC_000962.3 miniprot CDS 307895 308547 162 - 2 Parent=MP000024;Rank=1;Identity=0.3057;Target=sp|Q79FH3|PPE37_MYCTU 254 473 +##PAF sp|Q79FH3|PPE37_MYCTU 473 0 473 + NC_000962.3 699930 349934 351410 624 1515 0 AS:i:750 ms:i:750 np:i:271 da:i:0 do:i:63 cg:Z:203M7D33M5D23M1D11M1D7M8D7M1D10M3I7M1D11M3I3M2D9M1I5M2I11M1I16M3I27M4D59M1D15M1D3M cs:Z::1*gccT*gcgF:1*atcM:1*atgF:1*tcgV:4*catP:2*ttgW:2*aatT:1*ccgM:3*tcgP:1*gtgL:3*acgR:2*agcH*cagA:1*agtA:1*gagQ:1*gccT*tcgE*acgI:1*gcaT:2*agtA*gggS*ctaV:1*gggA:2*cctQ*ggtA*tggS*gcaS:6*gagD*tggR*tacF:1*gccV:2*ttgQ:1*tatF*gtgR*gcgY:3*cagH:1*agtA*gcgT*gatV:1*gcaT*ggaA:3*cagA:2*gccT:3*gccG:2*actS:2*gcaG*gccG:11*gtgA*attM:1*accG*gtgA:2*gcgT:5*atcV:5*acgA:6*gtgL:3*ttgI:3*gccT:2*ggtS*cttH:3*gctV*tcgA*ggtH*gcgE*gcaS*ctgV:1*tcgA*gcgT:1*cgcS:1*gtcP:3*acgQ*gttI*atgV*aatT*ccaS*ggtA*ggcA*ggtS*gcgS:1*agcA*actS*gtcS*gggS*gcgF*gtcP*aacD:1*tggT*cagK*tggL*ctcI:1*gcgQ:2*caaK*cagD-ctctggaacgcctacacgggt:1*tacL*gggE*tggL*atgL*ttgR*cagY:1*atcA*tggV*cagE*ttcL:1*cagP*gatG:1*attL:1*aacD*tcgL:1*aagA*atcQ*atcV*atcL*gccD*ttcW*ctcF*acgI*aatS*cccF*attV*cagS-gcactgatcacttac:2*ctgV*ttgF*ttcT*gcgF:1*ggcA:1*cagL*attV*ttcL*ttcD*aacP:1*gtcI*ggcY*tggF*ccgG*accP*tggF*ggcA*atgP-atc:1*agcT:2*ttcV:6-ggg*ctgT:3*gcaG*ataL*gccG-tttctacctattgtgcttgcgccc:2*attS*ccgG:2*agtG-act:1*ctgM*gctV*gctE*gccR*gccV*gtcH*gccS*gccD:1+PSR*tcgQ*gtgS:3*gtcA*agcT-atg*gccG:2*gggL*gcgV:2*gctN*gggP:2+LVT:3-gcgggc*gcgP:2*tctT*gcgT*ggcS:3+T:2*gcaS*gctT:1+GS*gcgS*accA:1*agtQ*ttcG*gccL:5+P*agcD:1*gatE*tggG*gggF*ccgN*agcP*ttgI*gggA*ccgK:1*gtaT*ggtA*ggtL*cgcA:1+VTT*ggtD*atcA*aagA:4*acgK*gttL:1*gcgG*gcgD*gccQ:1*gcgQ*gcgS*gcaS*actA*cgtS*gggK*cagA*tcgT:1*gcgL:3-cggcggtctgaa:2*gacQ*tacH*ggcR*gacF:3*gacA*atgD:1*tccG*gatR*agcL*ggtT*ttcM*ggcP*cccN*tcgT*acgP*ggcE*gacM*cacA*ggcD*gcgV*cagA:1*tccG*gaaN:2*gccL*gggD*acgA:6*gcaI*accP:1*gaaS*cgcA*cggP*gtcG*cggS:1*gtcT:3*gcaH:1*gccG:1*gatG-gag:1*ggcA*aacD*ggcV*cccL*cggS*atgQ:2*gtgL:1*gggH:2*gagD-cag:2*aacD +NC_000962.3 miniprot mRNA 349935 351410 750 + . ID=MP000025;Rank=2;Identity=0.4119;Positive=0.5366;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +NC_000962.3 miniprot CDS 349935 351410 750 + 0 Parent=MP000025;Rank=2;Identity=0.4119;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +##PAF sp|Q79FH3|PPE37_MYCTU 473 0 473 + NC_000962.3 699930 339357 351410 627 1557 0 AS:i:700 ms:i:727 np:i:271 da:i:-1 do:i:63 cg:Z:192M4D4M6D6M10538U5M11D28M5D23M1D11M1D7M8D7M1D10M3I7M1D11M3I3M2D9M1I5M2I11M1I16M3I27M4D59M1D15M1D3M cs:Z:*acgM*gctT*atgF*acgP*ctgM:1*atgF:1*tcgV:4*catP:2*ttgW:2*agcT:1*ccgM:3*tcgP*gtgL:1*tcgA:2*gggR*gtgA:1*tcgH*tcgA:1*agcA:1*gaaQ:1*gccT*gcgE*gtcI:1*gacT:2*ataA*gggS*ctgV:1*ggcA:3*accA*ggcS*gctS:6*gcgD*gctR*tatF:1*gccV:2*gcgQ:1*tacF*ctcR*gcgY:2*atgT*cggH:1*agcA*gaaT*accV*agcA*gcgT*gaaA:3*cggA:3*gtgA:2*gccG:2*accS:1*gtgL*gcgG*gccG:4*gtcA:6*acgA*cttM:2*gtcA:2*gcgT:5*atcV:12*gcgL:3*acgI:3*agcT*acgV:1*gcgS*accH:5*gagH*gccE*gcgS:2*tcgA*gcaT:1*cagS:1*accP:3*ccgQ:1*ttgV*gcaT*gccS*gaaA:1*gccS*gacS*gatA*gacA*cacS*gatS*catS*gacF*cacP:1-cacgggggcgaa:2*ccgK:1-gactatctggtcgcggag:2*cgcQ*atcL*atcL*agcK*gD~gt10535ag-cg*ttgF:1*caaE*cagL:1-tggaacgcctacacgggtttctacgggtggatg*ttgR*cagY:1*atcA*tggV*cagE*ttcL:1*cagP*gatG:1*attL:1*aacD*tcgL:1*aagA*atcQ*atcV*atcL*gccD*ttcW*ctcF*acgI*aatS*cccF*attV*cagS-gcactgatcacttac:2*ctgV*ttgF*ttcT*gcgF:1*ggcA:1*cagL*attV*ttcL*ttcD*aacP:1*gtcI*ggcY*tggF*ccgG*accP*tggF*ggcA*atgP-atc:1*agcT:2*ttcV:6-ggg*ctgT:3*gcaG*ataL*gccG-tttctacctattgtgcttgcgccc:2*attS*ccgG:2*agtG-act:1*ctgM*gctV*gctE*gccR*gccV*gtcH*gccS*gccD:1+PSR*tcgQ*gtgS:3*gtcA*agcT-atg*gccG:2*gggL*gcgV:2*gctN*gggP:2+LVT:3-gcgggc*gcgP:2*tctT*gcgT*ggcS:3+T:2*gcaS*gctT:1+GS*gcgS*accA:1*agtQ*ttcG*gccL:5+P*agcD:1*gatE*tggG*gggF*ccgN*agcP*ttgI*gggA*ccgK:1*gtaT*ggtA*ggtL*cgcA:1+VTT*ggtD*atcA*aagA:4*acgK*gttL:1*gcgG*gcgD*gccQ:1*gcgQ*gcgS*gcaS*actA*cgtS*gggK*cagA*tcgT:1*gcgL:3-cggcggtctgaa:2*gacQ*tacH*ggcR*gacF:3*gacA*atgD:1*tccG*gatR*agcL*ggtT*ttcM*ggcP*cccN*tcgT*acgP*ggcE*gacM*cacA*ggcD*gcgV*cagA:1*tccG*gaaN:2*gccL*gggD*acgA:6*gcaI*accP:1*gaaS*cgcA*cggP*gtcG*cggS:1*gtcT:3*gcaH:1*gccG:1*gatG-gag:1*ggcA*aacD*ggcV*cccL*cggS*atgQ:2*gtgL:1*gggH:2*gagD-cag:2*aacD +NC_000962.3 miniprot mRNA 339358 351410 727 + . ID=MP000026;Rank=3;Identity=0.4027;Positive=0.5222;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +NC_000962.3 miniprot CDS 339358 339994 542 + 0 Parent=MP000026;Rank=3;Identity=0.5164;Target=sp|Q79FH3|PPE37_MYCTU 1 202 +NC_000962.3 miniprot CDS 350530 351410 185 + 2 Parent=MP000026;Rank=3;Identity=0.3235;Target=sp|Q79FH3|PPE37_MYCTU 203 473 +##PAF sp|Q79FK6|PPE26_MYCTU 393 0 393 - NC_000962.3 699930 466872 468001 498 1215 0 AS:i:606 ms:i:606 np:i:213 da:i:0 do:i:198 cg:Z:164M1G6M2I53M19I26M7D23M4I10M3D23M2I30M2D27M1I2M cs:Z::9*atcV:2*gccV:1*atcM:1*tccA:4*aggA:1*ctgM*atgV*caaA:2*gcaS:2*caaN*cggG:2*aacA:2*accS*gcgS*acgA:1*gctT*tccG:1*tccE*tcgT:2*tccT*gggQ:1*accS*ggcS*gatE*gacG:4*tcgA*gcaS*ctgA*tcgA:2*gccE:1*gccV*gtcA:6*aggS:1*accA:2*tcgQ:5*gctT:2*gtgR:3*aacA:1*tacF:1*tcgA:1*tacF:6*acgP*gtaL:5*cgcA*acaS*atgL*ctgM*tcaQ:1*gtcI*cagS:8*ccgS:3*actA*agtA:1*acgA*cacQ:6*catQ:1*atcS*ttgA:2*gacY*ggcA:3*gccS:1*gggA*gccS:2*cagA*ttgV*cT*gccP*gttF*cacS*ccgT:2+QI:1*accN*accP*agcT*gggA*gccQ:1*tcgT*ctgQ*agtA*gacA:1*gccV:4*cagG*gcgT*gtaA*gtaQ*ccgS*gccT*gccL*gcgT*gcgE*accM*gacI*gtgT*agcG:1*ctaP*ccaN*accA:3*ttcL*ctaT*ccgS:1*cccL*ttcL*gacQ*gccS*attS*ccgN*aacG:1*atcL*gagS*gatW:1+WQILFGTPNFPTSISALLT:1*gttL*ctcQ*gtaP*gccY:1*gctS*gtaF*gccF*gtcY*gcgN*gctT*ggcE*agtG:1*gggP*gtaY*tcgF*gcgS*gcgI*cagG*ctcM:1*gagN*atcN*tacF-cgccacgacgtggtcgacgag*gccI:1*aagS:1*ccgK*catT*tgcL*ccaG*gccL*gaaI*tccG*gacS*cagA*acaA:2*gggA*gccV:1*ggtA*gacA:2+AAKG:2*gagG*gtcL:2*cggM*gtcL*accG*agcG-ccgccacag*ccgG:4*ctcG*accL:1*tacN*tccA:1*aacS*atcV:1*ggaK:4*cacP*agcV:1*aatS+GP:2*ccaG*gcgS:1*cgcT*caaP*gttG:2*atgP*ttcL:1*ggcV*gcgS:1*ccgV*atgS*tatA*atgA*acgP*gggE*agtA*tcgA*gacP:2*tacL*gccL:1-ctggca*gcgG*gcgL*ggtP:3*accA:1*ctgG:2*cttA*gccG*gccP:1*ggtY:1*tccF*gcgR:2*ccgV*gctM:1*gccR*gccP:1+F:2 +NC_000962.3 miniprot mRNA 466873 468001 606 - . ID=MP000027;Rank=1;Identity=0.4099;Positive=0.5259;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 1 393 +NC_000962.3 miniprot CDS 466873 468001 606 - 0 Parent=MP000027;Rank=1;Identity=0.4099;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 1 393 +##PAF sp|Q79FU0|PG18_MYCTU 457 0 457 - NC_000962.3 699930 288777 336310 651 1461 0 AS:i:756 ms:i:827 np:i:264 da:i:0 do:i:54 cg:Z:34M1D63M3I42M9D30M3D4M264V4M1I8M1I13M2I29M4D27M4D12M7D8M6I17M1I33M45856U25M2D92M cs:Z::4*attN*gcgV:2*gagQ*gttL*atcV*gcgS*gcaT:2*acgA:1*ttgA:1*agtR*ctcI:2*agcA:1*agcN*gcgT:2*gcaT:4-aac:2*gcaQ*ctgV*atgL:2*ggcA*gccH:12*gccS:3*gccH:3*ctcI:3*gcgV*cagA:1*tttY*catQ*gccE*cagR:2*cagL:2*accS*tccQ*ggtA*ggcS*ggcS*gccT:2*gccV:4*gcgS*gtgA*tcgT:2+QNV:2*ccgA:2*gagA*ttcP*ttcV*ctgQ*gcgS*aatL:7*aacD:4*gccI*cccD:3*gccQ*aatA:2*gacN:4*atcW:4-gccggaggatccggcgcggccggcgtc:3*gccS:1*ggcA*aacP:1*ggcQ:3*aacA:3*ggcA:13-gtcgccagc*agtQ:1*atcL*ggcP*ggF~gt261ag-c*tccE*ggcA:2+N:8+W:3*gccN:2*accA:2*catV:2*ttcA+GG:1*gacG*agcT*agcT:2*ggaV*gtcA:2*gccD:2*gccT:2*ctgV*ttcG:1*gcaH:2*gaaL*ggcI:1*agcV:3-agcctggtcgcc:5*gccT:2*aatT*gccG:1*atgA*ctcV*gccS:1*ggcA*gccR:2*ggcT:3*atcA:2*gacG-ggcggtactctc*acgP:9*gccV:1-ggcaacgctgggctgctcttc:1*tccA:2*tccA*ggcA:2+VTTITH*ggcA*ggaS:1*ggcN*ttcD*gccP*gacH:1*gggV*caaA*ggcV*ggcN:4*gccI+Y*ggcV:1*gtcN*ttcQ:2*ggcN*ggcT*gccV*ggcS*ggcV*aacI*ggcD*ggaP:1*ggcT*cagN*ggcT*ttcV*gccT:1*gggS:1*ggtT*gggD*gctG*ggcN:1*accP*cccS:1*ctgV*atcA*gV~gt45853ag-ct*catS*ctgP*ggaV*gctT:2*gcgV:1*gaaV*tcaT*tacN*atcF*gaaD*tttS*acaN*tctT*gcaV:1*aaaV:1*cacD:1*catN*ctcT*agtN-ggccga*tacT*cgcV*gcaT:1*cagS*tgcI:2*tcgG*agcT*cgaG*tccA*accY:1*gcgV*cccA*ttgV*aggN:1*agcG*cagG:1*aggI*ttgY*atcV*atcT*atcN*tcgQ*gccF*gccS*tcgN*tcaT*acgV:2*tcaI*ccgD*ataP*ccgA*agcT*cggN*gtgT*gccV:1*gccG:2*gcgI:1*accV*agcG*gcgL*acgD*gccP*atcT*atcG*tcgV*attA*tcgV*gcgN*tccP:1*agcT:1*ccgV*cggV*gtgY*ccgV*gccT*cgcN*accS*aacL*tcgD*gccD:1*agtV*tggS*acgV:1*tgtT*tcgG*cgcE:1*tcaA:1*accS:2*gcgS*aacA:1*tggI +NC_000962.3 miniprot mRNA 288778 336310 827 - . ID=MP000028;Rank=1;Identity=0.4456;Positive=0.5421;Target=sp|Q79FU0|PG18_MYCTU 1 457 +NC_000962.3 miniprot CDS 335751 336310 493 - 0 Parent=MP000028;Rank=1;Identity=0.5789;Target=sp|Q79FU0|PG18_MYCTU 1 176 +NC_000962.3 miniprot CDS 334990 335489 268 - 1 Parent=MP000028;Rank=1;Identity=0.4494;Target=sp|Q79FU0|PG18_MYCTU 177 339 +NC_000962.3 miniprot CDS 288778 289136 66 - 2 Parent=MP000028;Rank=1;Identity=0.2269;Target=sp|Q79FU0|PG18_MYCTU 340 457 +##PAF sp|Q79FU0|PG18_MYCTU 457 0 457 - NC_000962.3 699930 674619 675916 669 1438 0 AS:i:853 ms:i:853 np:i:262 da:i:0 do:i:441 cg:Z:95M2I77M3I30M10I28M4D16M7D6M7D37M4I9M1F32M6I10M1I20M10I12M4D6M4I21M7I11M cs:Z::4*atcN*gcgV*acgA:1*gagQ*atgL*ctgV*accS:3*acgA:1*ttgA:1*aaaR:3*acgA:1*actN*gcgT:7*gtgT*gcgT*aaaQ:2*cccA:1*tcaA*gccH:4*gtgT:1*gttI:5*acgS:1*gccG:1*gaaH:2*accA*gtcI:5*acgA*tttY*catQ*gacE:3*cagL*accA:2*gcgQ:1*gcgS:1*tcgT:1*gtgA*gccV:3*gtcA*aacS*gttA*gaaT+PL:1*agtN*ttgV:1*gccD:1*gtcI:3*accV:1*gcgS:1*ttcT:6*aacD:2*gacN:1*tccI*cccD:7*ccaN:2*atcW:1*tacW:13*cgaA:14*aacA:5*gtgQ:1+LPF*accE*accA:1*gggA*gccN:2*cacA:7*tatF:7*tttV:4*gcgG*gtcA+GTTFGVAGGD:2*aacT:2*gccV:2*accH*gccG:2*ttcI:4*gccH:2*gccD:2*aacT:1*atcG*gccT:1-gtcacgggtacg*tcgG:1*agcV*acaS*ccgL*ggtA*ggaR*tccA:8-atcggcggcaacggcggggcc:1*gggP:3*gtgI-ctgatgggcaacggcggcaac:5*gagV:2*cccA:3*ggcA:2*ggcV*gccT*agcT*ggcI*gccT:2*accS*aacF*ttgN*ggcD*gctP*gacH:1*caaV:1*ggcV*ggaN*aacP:3+IYVT*ggtN*gggQ*gctG*ggcS*gggN:1*ggcV*gggS:1-g*gcgI*ggcD:1*gcgV*gcgT*gccN:2*tgcT*tcgG*gccS*tcgI*gcgT*gcaD*gccG*acgN*gcgG:1*gcgS:1*ctgV:2*gcgS*gcgP:2*gcgG*gagL*ctcV*ccgF:1+TNFDSN:1*gcgV*gcaS*acgV*gcgI*ctaD:1*ggaN*cgtT*gggN+T:2*accG*ttgS*gtgI:1*gcgV:1*ccgT*gtgG:1*atgY*gcgG*gcaV*accA*cggV*gcgN:1*gtgG:1+NIYVTNQFSN*ccgT:1*gcgS*ccgV*gtgI*gcgD:2*tcgT*gcgN*gcaT*gcgV-cgcatggcgcga:1*gcgG*cgcS:1*gcaI:1+VGLD:1*ccaT*ccaG*gcgV*gtgA:1*acgN*gcgP*gcgV:1*gcgG*gcaV*aagV*gcgY*ccgV:1*ctaN:1*gcaL*gcgD:1+TVSVITG*agaE:3*acgS:1*gcaC*gggS*gtgA:1*acgI +NC_000962.3 miniprot mRNA 674620 675916 853 - . ID=MP000029;Rank=2;Identity=0.4652;Positive=0.5466;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 1 457 +NC_000962.3 miniprot CDS 674620 675916 853 - 0 Parent=MP000029;Rank=2;Identity=0.4652;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 1 457 +##PAF sp|Q79FU0|PG18_MYCTU 457 0 457 + NC_000962.3 699930 149532 151576 690 1477 0 AS:i:767 ms:i:822 np:i:272 da:i:0 do:i:636 cg:Z:34M1D60M3I78M10D156V34M1I13M1D15M2I12M2D8M7D27M9D3M1D15M1I25M489U13M1F16M3D7M1D8M1I15M6I7M10I41M cs:Z::4*agcN:3*gagQ*attL:1*gtgS*gccT:2*acaA:1*ctgA:1*ggtR:5*agcN*gcgT:2*gccT:4-ccg:2*gccQ:4*ggtA*gccH:4*gcgT:6*tccG*ggcS:1*gctG:1*gccH:3*ctcI:3*gcgV:2*tttY*catQ*cagE*cagR:2*cagL*acgA:1*gccS*ggtQ*ggcA*gctS*ggaS*gcaT:2*gccV:3*cagA*gtcS*gagA+TPL:1*cagN*ctgV:1*gccD:5*accV:1*gcgS:1*ctgT:6*aacD:2*gatN:1*gcgI*ccgD:7*gctN:2*atcW:1*tacW:10*gctP:8*ccgA:5*catN:2*tccA:5*tccQ:1*gcgL-gccggcggggccggcgggcacggcggatgg*ctP~gt153ag-c*ggtF*ggaE*gacA:1*ggcA*ctcN:5*ggtA:4*tacF:1*gacN:5*cacV:2*caaA:1*gcaG*atcA:1*ctcT*ggcT+F:1*ggcV:6*cagT:2*gccV:1-cgc:1*ctgH*tggG:1*actL*ggcI:1*gccV:5*caaD:1+GT:5*ccaA*ccgV*ctgS*cccL*ggtA*cagR:1-ggcatg:1*gccT:6-ctgatcggcaacggcggggcc:1*ggcP*gacA:2*gtcI:1*gcgG*tccA:3*gccG:1*gtaA:3*ggcA:1*aacA*gccV*atgT*ctgT:1*gggT:1-ggcggcgccggcggcgccggcggagac*agcA:2-gct:1*ggcD*gcgP*gccH:1*ggcV:1*ggcV*ggtN*gccP:2*cacN*ctcI*ttcY+V*ggcT:1*ggcQ:2*ggcN*ggcT*cacV*ggcS*ggaV*gccI*gtcD*acgP*gccV*ggcT:2*ggtV*atcT:1*ggcS*gccI*ggcT*ggcD*gtcG*gN~gt486ag-gc:2*gccS:1*cttV*gtcA*gcaV*ggaS:2*cgcT*cgaG:1-c*cccV*gcgF*ctgV*cccT*ctcN*gacF*ccgD:1*gcgN*atgT:1*gccS*caaV*gtgI*gggD:1-caggtggtc:1*atcT:2*aaaV*ctgT:1-tac*aacS*aacI*gccP:2*gccT:1*accA+Y:1*atcV*gtcA*atcV*gatN:1*aacG:1*gtcN*gtgI*ctgY*accV*aacT:1*cacQ+FSNTVS:2*gcgD*ggcP:2*gacN+TVTGSPIPVG*atcL*aatD*gcgP*ttcT*agcG:1*ggcA*tccV*ggcN*caaP*accV*tacT:2*gatV*gtgY:1*gggT*tatN*gacS*cgcL*accD*cagD*gatT:1*gcgS:1*ctgI*cagT*ctgG*cgcE*ggtP:1*ggtR*ggcS*ctgV*ccgC:4 +NC_000962.3 miniprot mRNA 149533 151576 822 + . ID=MP000030;Rank=3;Identity=0.4672;Positive=0.5525;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 1 457 +NC_000962.3 miniprot CDS 149533 150083 520 + 0 Parent=MP000030;Rank=3;Identity=0.6203;Target=sp|Q79FU0|PG18_MYCTU 1 175 +NC_000962.3 miniprot CDS 150237 150754 268 + 1 Parent=MP000030;Rank=3;Identity=0.4463;Target=sp|Q79FU0|PG18_MYCTU 176 332 +NC_000962.3 miniprot CDS 151241 151576 34 + 2 Parent=MP000030;Rank=3;Identity=0.2727;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 333 457 +##PAF sp|I6Y3P1|LPRN_MYCTU 384 0 351 + NC_000962.3 699930 204097 205129 360 1053 0 AS:i:480 ms:i:480 np:i:184 da:i:3 do:i:105 cg:Z:5M1I69M5I47M1I223M cs:Z:*cgcM*cacN:1*gccI:1+L*cagR*gggA*ctgI*gtgI:1*ctgT*gtgA*ctcS*gcaS*ctcA:2*agtA*tcgG:1*ggcQ*tggF*cgcG:1*atcL*tccN*aatS*gtgL*gcgP*atcL:2*ggcT*ccgA:1*accH:1*ccgE:1*tccA:1*accS*atcV*tacT:1*cagE:1*ccgA:1*acgV*ttgA*gcgT*atcL*aacP*ggcQ:2*cggP:3*gccD:2*tggT:3*atcV*cgcA*gcgG:1*aagV*ttgA+VQRPD*aagG*aacS*tggF*gtgY:1*acgA*ctgV*acgK:1*agcD:1*aagD:1*gacN:1*acgL:2*aaaA:2*accV:2*atcV*gggS:7*cagL:5*gcgP:1*ccaT:1*ccgR*tcgP:1*gtgT+G*ccgR:1*aagV:2*gacS*accR:1*ccgT*ttgE*aagA*cgcN*tccT*tcgD*gccR*tatF:4*cagE*acgV*ctgF*gccS*agcA*atcL*gccG*accV*ttgV*ttgV*cgcN*ggcK:1*ggcN*ctgV*gtgG*aacA:2*gggE:1*cagI*caaD:1*atcT*aacH*gccQ*atcA:1*acgA:2*gcgQ*gacA:1*atcF*cggV*gccN*tttL*cttV*ggcP*aagR:1*gacA*accE*ttcL:1*gacA*gagG:2*cagR:1*cgcV*gatH:2*accI*cgcD:1*attL:1*tccG*accL:2*ttgV*ttgS:1*tatI*gtgL*ggcA*ggtR*cgtD*tcgK*gaaD*gtcN:1*aatG:1*gtgA:1*accD*gacT:2*ccaD*ttgA*atcV*aagR*cacV*tttL*gcgN*gatQ*aagN*cagR*gaaD*ctgH*ttgI*atcV*aacD:1*tccF*gatA:1*gtaL*ggcK:2*agcT*cagM*tccV*gccT*gacS*cagH*tatV:1*tcgA*gctE*gccT*cggK*ggcV:1*ctgF*cacG*cagE:2*cagK*gcgD:1*caaY*tgcS*ccgI*ctcV:1*gaaA:1*cgtN*cgaD*gccD*gctR*ccgK*tatD*ctgF:1*ggtT*gcgS:1*aaaQ:1*atcL:2*cagF:2*gacP*gtcN*gacF*accG*gtgI*ccgK:1*ctgA:5*atgL:1*ttgV*tcgF*ctgT:1*ctgF:3*tacL*agcR*gccR:1*gacG*aatE*gcgT:1*cttF:1*gggT*accA*ggaY:1*tccD*ggtP*gcgN*ttgM*cgcA*gccH*ctcM*gagD*cagE +NC_000962.3 miniprot mRNA 204098 205129 480 + . ID=MP000031;Rank=1;Identity=0.3419;Positive=0.5242;Target=sp|I6Y3P1|LPRN_MYCTU 1 351 +NC_000962.3 miniprot CDS 204098 205129 480 + 0 Parent=MP000031;Rank=1;Identity=0.3419;Target=sp|I6Y3P1|LPRN_MYCTU 1 351 +##PAF tr|I6Y6S3|I6Y6S3_MYCTU 187 0 187 + NC_000962.3 699930 57409 57970 558 561 0 AS:i:955 ms:i:955 np:i:187 da:i:75 do:i:0 cg:Z:187M cs:Z:*gtgM:186 +NC_000962.3 miniprot mRNA 57410 57973 955 + . ID=MP000032;Rank=1;Identity=0.9947;Positive=1.0000;Target=tr|I6Y6S3|I6Y6S3_MYCTU 1 187 +NC_000962.3 miniprot CDS 57410 57970 955 + 0 Parent=MP000032;Rank=1;Identity=0.9947;Target=tr|I6Y6S3|I6Y6S3_MYCTU 1 187 +NC_000962.3 miniprot stop_codon 57971 57973 0 + 0 Parent=MP000032;Rank=1 +##PAF tr|L7N6B3|L7N6B3_MYCTU 383 0 383 - NC_000962.3 699930 191986 193135 1146 1149 0 AS:i:1964 ms:i:1964 np:i:383 da:i:-1 do:i:0 cg:Z:383M cs:Z:*gtgM:382 +NC_000962.3 miniprot mRNA 191984 193135 1964 - . ID=MP000033;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|L7N6B3|L7N6B3_MYCTU 1 383 +NC_000962.3 miniprot CDS 191987 193135 1964 - 0 Parent=MP000033;Rank=1;Identity=0.9974;Target=tr|L7N6B3|L7N6B3_MYCTU 1 383 +NC_000962.3 miniprot stop_codon 191984 191986 0 - 0 Parent=MP000033;Rank=1 +##PAF tr|L7N6C0|L7N6C0_MYCTU 101 0 101 + NC_000962.3 699930 612597 612900 303 303 0 AS:i:522 ms:i:522 np:i:101 da:i:0 do:i:0 cg:Z:101M cs:Z::101 +NC_000962.3 miniprot mRNA 612598 612903 522 + . ID=MP000034;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N6C0|L7N6C0_MYCTU 1 101 +NC_000962.3 miniprot CDS 612598 612900 522 + 0 Parent=MP000034;Rank=1;Identity=1.0000;Target=tr|L7N6C0|L7N6C0_MYCTU 1 101 +NC_000962.3 miniprot stop_codon 612901 612903 0 + 0 Parent=MP000034;Rank=1 +##PAF tr|O07169|O07169_MYCTU 525 0 525 + NC_000962.3 699930 144048 145623 1575 1575 0 AS:i:2669 ms:i:2669 np:i:525 da:i:0 do:i:0 cg:Z:525M cs:Z::525 +NC_000962.3 miniprot mRNA 144049 145626 2669 + . ID=MP000035;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07169|O07169_MYCTU 1 525 +NC_000962.3 miniprot CDS 144049 145623 2669 + 0 Parent=MP000035;Rank=1;Identity=1.0000;Target=tr|O07169|O07169_MYCTU 1 525 +NC_000962.3 miniprot stop_codon 145624 145626 0 + 0 Parent=MP000035;Rank=1 +##PAF tr|O07411|O07411_MYCTU 554 0 554 + NC_000962.3 699930 194992 196654 1659 1662 0 AS:i:2831 ms:i:2831 np:i:554 da:i:-1 do:i:0 cg:Z:554M cs:Z:*ttgM:553 +NC_000962.3 miniprot mRNA 194993 196657 2831 + . ID=MP000036;Rank=1;Identity=0.9982;Positive=1.0000;Target=tr|O07411|O07411_MYCTU 1 554 +NC_000962.3 miniprot CDS 194993 196654 2831 + 0 Parent=MP000036;Rank=1;Identity=0.9982;Target=tr|O07411|O07411_MYCTU 1 554 +NC_000962.3 miniprot stop_codon 196655 196657 0 + 0 Parent=MP000036;Rank=1 +##PAF tr|O07775|O07775_MYCTU 103 0 25 + NC_000962.3 699930 699855 699930 75 75 0 AS:i:117 ms:i:117 np:i:25 da:i:0 do:i:-1 cg:Z:25M cs:Z::25 +NC_000962.3 miniprot mRNA 699856 699930 117 + . ID=MP000037;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07775|O07775_MYCTU 1 25 +NC_000962.3 miniprot CDS 699856 699930 117 + 0 Parent=MP000037;Rank=1;Identity=1.0000;Target=tr|O07775|O07775_MYCTU 1 25 +##PAF tr|O53537|O53537_MYCTU 317 0 314 + NC_000962.3 699930 75300 76203 462 954 0 AS:i:625 ms:i:614 np:i:197 da:i:0 do:i:6 cg:Z:107M1I47M1D38M1I21M5I1M2I4M3I12M1I37M4I13M3D17M cs:Z::1*accA:1*tggD*actL*gccV:1*gacT*attV:2*cagL*accS:1*cggK*accL:1*gtcI:5*accS:4*gagG*accL:1*gcaR*gcgR:1*gccS:1*catA:2*cacD:1*gtgI*ctgM:1*gtgI:2*ctcR*gacA:2*aagE*cagA:1*gcgV*gcaE*cgcE:1*accR*gagT:1*accV:1*ggcD:1*gaaK*gtaL*gagT*cttI*cagK*gagA:3*accS:5*cgcA:1*gccL*gcgG*gcaE:2*aagM*tctA:1*cacG*cagR*cgcP:11*tatT*acaP:1+E:1*cagV:7*atgL:3*accS:9*ggcA*ctgH:1*attL*gatP*cgaL:1*ctgR*cccA*gtcA*gccQ*ggtR*tcaA:3*accS*atcL:2*gtcL*ggcA*catA:1-atc:1*gccG*gcaR:7*tggF:2*cggS:1*aggA*cggP*gtcM*gccT:4*gccS:3*aacV:1*ctgM:1*actA*tatR:2*cagD:2+S*ttaR:1*ccgA:1*ggaW*accG*accI:1*gcgS*gtcN:1*tcgA:3*gtgL*tccT*aacK:1*gaaN*gtgL+QIAGP*gtcS+HG:1*aacD*atgK:1+ALM*cggE*ccgR:1*gtcY*gcgK*gtgT*gcgS*gccW*ataR*ctgF:2+F:1*atgW:1*gacE*gccI:1*ctgE:1*gccI:2*acaA:1*cgtY:2*accA*gatT:1*gcgQ*gtgA*cgcD:2*cagA*tacF*ttcY:2*gatR:1*ttcR*ggtY:1*ataV*cggA:1+GGVR*tacE*ccgA:2*gtgP:1*tccA*agcA*gccR*cagN*tctD*cacA:1-gagcagctg*cagS*cgcK:3*gctE:3*gagQ:4*gtcS:2 +NC_000962.3 miniprot mRNA 75301 76203 614 + . ID=MP000038;Rank=1;Identity=0.4843;Positive=0.6195;Target=tr|O53537|O53537_MYCTU 1 314 +NC_000962.3 miniprot CDS 75301 76203 614 + 0 Parent=MP000038;Rank=1;Identity=0.4843;Target=tr|O53537|O53537_MYCTU 1 314 +##PAF tr|O53641|O53641_MYCTU 214 0 214 + NC_000962.3 699930 186784 187426 642 642 0 AS:i:1102 ms:i:1102 np:i:214 da:i:0 do:i:0 cg:Z:214M cs:Z::214 +NC_000962.3 miniprot mRNA 186785 187429 1102 + . ID=MP000039;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53641|O53641_MYCTU 1 214 +NC_000962.3 miniprot CDS 186785 187426 1102 + 0 Parent=MP000039;Rank=1;Identity=1.0000;Target=tr|O53641|O53641_MYCTU 1 214 +NC_000962.3 miniprot stop_codon 187427 187429 0 + 0 Parent=MP000039;Rank=1 +##PAF tr|O53968|O53968_MYCTU 342 6 342 + NC_000962.3 699930 688043 689059 468 1020 0 AS:i:687 ms:i:687 np:i:211 da:i:12 do:i:0 cg:Z:65M1D48M1I138M2G42M1D20M2D21M cs:Z::1*acaV*actV*atcV*aaaR:2*atcV*gtcF*tggL*ttgA:1*ctgC*tcgL*gtgL*ttcT*accA*gtgF*atgL*atcL:1*gtgA:3*cagE:3*catG*cacD*accG*accK*gggT:1*tccY:1*gtgE:1*accA*catN:2*gggN:2*gccT:1*caaK*tttL:2*gctI:8*gccT*aagR*gtaI*acgS-ctg:1*gacN*gggP:1*aagA*caaT:1*ttgR:1*gacQ:2*gtgA:1*cgcN:1*ctgV*tcaT:1*gatT*cagR*gcgG:1*accR:1*tcgV:3*ctcD:2*atcF:5*gagA:1*ggcE*cgcE:1*cacA*agcG:1*cagL*cggA+V:1*gcgR:2*gccH:4*gagA*cacR:1*catQ:8*ctcI:3*cgcK:3*caaR*acgA:1*gacN:1*gacE*aagQ:2*agcA*atcL*gccS*tccE*tcgQ*atcL*atcL*accH*gtgA:1*caaA:3*gccP:2*aacG*gacS*atcL:1*gacA:1*accS:1*tcgA*ctgV:1*gcaN:6*catR*gcgL:2*gagQ:1*gtcI*aacT:3*accV:2*gccG*accS*accL*gtcG*aagA:1*caaT*acgD*gaaR*ttcL:1*cgcQ*acgA:1*gacT*aagS:1*gagS*gtgA:2*actH*ggaR:1*aagA*aacQ:1*gcgK*gacT*ccgD*ctgI*gccS*gcgN:1*gcgV:1*cacY*atcT*agcN*agcA:3*accS*ctaV:4*gggS*cggQ*atA:1*ccaA*ttgP:1*cacA*agcK*agcV*ttcV*gggR*cacE*ctcT*gagD*ggcR*atcV*cagA*cagG*ccgI*ctcA*ataA*gacA*gagD*ctgH*gcaD*gaaY:2*cacN*gtgL:1*ggcN*aagT:3*gccK:1*cggQ*atcA*atcL*ggcV:1*gccQ-ggc:1*ataM:5*aacA:5*atcV*tcaV:5-ttacag*cctK:2*ccgQ*gtaP*cgcV*accY*gtcI:2*ttcA:2*ccgD*accS:3*acaA:1*caaK +NC_000962.3 miniprot mRNA 688044 689062 687 + . ID=MP000040;Rank=1;Identity=0.4588;Positive=0.6206;Frameshift=1;Target=tr|O53968|O53968_MYCTU 7 342 +NC_000962.3 miniprot CDS 688044 689059 687 + 0 Parent=MP000040;Rank=1;Identity=0.4588;Frameshift=1;Target=tr|O53968|O53968_MYCTU 7 342 +NC_000962.3 miniprot stop_codon 689060 689062 0 + 0 Parent=MP000040;Rank=1 +##PAF tr|O69697|O69697_MYCTU 346 0 304 - NC_000962.3 699930 323616 324525 450 918 0 AS:i:706 ms:i:706 np:i:186 da:i:6 do:i:276 cg:Z:32M2D17M1I106M1I68M1I78M cs:Z:*cgcM*atgA:2*ccgA*gtgE*tcgE:3*cacD:1*cgcI*cagA:1*atcR*gtcL:1*catS:1*ggcD:1*gtcM*gtcY:2*gctK*cacL*aacG*gatS*cgaH*aagG-ggctac:2*ttcR*gatR:2*cgcE:2*ctcF:3*gagG:1*gcgP:1+L*cgcT*gggA*gtgL*gccR*ggcD:2*atgT*attH:1*aagQ:2*gtcP*aagD:1*atcV*tccD*gccG:1*gcgQ*gtgI*tttY:3*gcaI:1*gcaR*aacH:3*tggY*gtgL*gacQ*gtgT*gccC*gagR*ctgV*cacT*tatF*gcgP:3*tccM:1*gcgD*gagA*gcgL*gtcK*attV*cacT*gacH*gccP:1*gggA*ctgI*gcgV:1*gtgA*atcA*aacQ*ctgM:1*tgtT*gtgI*gatT:1*aatH:1*catW*ccgQ:1*ctcR*gccC*ggcP:1*ctcT*gatE:6*gtgI:4*atgQ:2*gtcT*gcgG*tggF*cagV*cggE*gtcA*gtcR*gagT:2*ttgV+D:1*gtcL:1*gagS:2*gagD:1*tacL:2*accV*gcaG*tggY:5*tcgG:2*tttI:2*tatF*gccL:3*cctT*tgcD:1*tcgD:1*cccV*cagE:2*ctgR:1*gccG*cagI*accA*gttL:7*ctaA:3*gcaV:1*agtT*cgtS:6*gagG*ggcA+R*gtgI:1*gtcI:6*aagR:3*gtcM:7*gccP:2*gatI:1*cggT:2*acgM:2*cacT:3*gtgL*cccA:1*tgcA:2*gcgD*gtgD*ttcY:2*gccT:3*agcE*cggL*ttgV*gccK*gacI*atcR*ggtD:8*gcgV*gttA*ggcQ*cggS*ctcI*gacA*cggP:2*atgD:2 +NC_000962.3 miniprot mRNA 323617 324525 706 - . ID=MP000041;Rank=1;Identity=0.4902;Positive=0.6078;Target=tr|O69697|O69697_MYCTU 1 304 +NC_000962.3 miniprot CDS 323617 324525 706 - 0 Parent=MP000041;Rank=1;Identity=0.4902;Target=tr|O69697|O69697_MYCTU 1 304 +##PAF tr|O86335|O86335_MYCTU 1402 0 1402 + NC_000962.3 699930 485730 489936 4206 4206 0 AS:i:7166 ms:i:7166 np:i:1402 da:i:0 do:i:0 cg:Z:1402M cs:Z::1402 +NC_000962.3 miniprot mRNA 485731 489939 7166 + . ID=MP000042;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O86335|O86335_MYCTU 1 1402 +NC_000962.3 miniprot CDS 485731 489936 7166 + 0 Parent=MP000042;Rank=1;Identity=1.0000;Target=tr|O86335|O86335_MYCTU 1 1402 +NC_000962.3 miniprot stop_codon 489937 489939 0 + 0 Parent=MP000042;Rank=1 +##PAF tr|P71591|P71591_MYCTU 322 0 322 - NC_000962.3 699930 25915 26881 963 966 0 AS:i:1625 ms:i:1625 np:i:322 da:i:-1 do:i:0 cg:Z:322M cs:Z:*gtgM:321 +NC_000962.3 miniprot mRNA 25913 26881 1625 - . ID=MP000043;Rank=1;Identity=0.9969;Positive=1.0000;Target=tr|P71591|P71591_MYCTU 1 322 +NC_000962.3 miniprot CDS 25916 26881 1625 - 0 Parent=MP000043;Rank=1;Identity=0.9969;Target=tr|P71591|P71591_MYCTU 1 322 +NC_000962.3 miniprot stop_codon 25913 25915 0 - 0 Parent=MP000043;Rank=1 +##PAF tr|P96399|P96399_MYCTU 302 0 302 - NC_000962.3 699930 259925 260831 903 906 0 AS:i:1569 ms:i:1569 np:i:302 da:i:-1 do:i:0 cg:Z:302M cs:Z:*gtgM:301 +NC_000962.3 miniprot mRNA 259923 260831 1569 - . ID=MP000044;Rank=1;Identity=0.9967;Positive=1.0000;Target=tr|P96399|P96399_MYCTU 1 302 +NC_000962.3 miniprot CDS 259926 260831 1569 - 0 Parent=MP000044;Rank=1;Identity=0.9967;Target=tr|P96399|P96399_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 259923 259925 0 - 0 Parent=MP000044;Rank=1 +##PAF sp|P9WI39|PPE11_MYCTU 518 0 518 + NC_000962.3 699930 543173 544727 1554 1554 0 AS:i:2678 ms:i:2678 np:i:518 da:i:0 do:i:0 cg:Z:518M cs:Z::518 +NC_000962.3 miniprot mRNA 543174 544730 2678 + . ID=MP000045;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI39|PPE11_MYCTU 1 518 +NC_000962.3 miniprot CDS 543174 544727 2678 + 0 Parent=MP000045;Rank=1;Identity=1.0000;Target=sp|P9WI39|PPE11_MYCTU 1 518 +NC_000962.3 miniprot stop_codon 544728 544730 0 + 0 Parent=MP000045;Rank=1 +##PAF sp|P9WKY1|Y3466_MYCTU 222 0 222 - NC_000962.3 699930 104436 105101 609 666 0 AS:i:1037 ms:i:1037 np:i:209 da:i:0 do:i:0 cg:Z:97M2G124M cs:Z::1*ttaG*gcgS*aatG:3*gagR*cttI:9*gacE:12*agcT:14*gcgV:5*gccV*cagG:1*acgA:6*accA:24*gaaD:1*ggcA:2*agcI:1*gaaD:1*aagA*ccD:2*caaP:121 +NC_000962.3 miniprot mRNA 104434 105101 1037 - . ID=MP000046;Rank=1;Identity=0.9144;Positive=0.9414;Frameshift=1;Target=sp|P9WKY1|Y3466_MYCTU 1 222 +NC_000962.3 miniprot CDS 104437 105101 1037 - 0 Parent=MP000046;Rank=1;Identity=0.9144;Frameshift=1;Target=sp|P9WKY1|Y3466_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 104434 104436 0 - 0 Parent=MP000046;Rank=1 +##PAF sp|P9WLB1|Y236A_MYCTU 57 0 57 - NC_000962.3 699930 286900 287071 171 171 0 AS:i:281 ms:i:281 np:i:57 da:i:0 do:i:0 cg:Z:57M cs:Z::57 +NC_000962.3 miniprot mRNA 286898 287071 281 - . ID=MP000047;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WLB1|Y236A_MYCTU 1 57 +NC_000962.3 miniprot CDS 286901 287071 281 - 0 Parent=MP000047;Rank=1;Identity=1.0000;Target=sp|P9WLB1|Y236A_MYCTU 1 57 +NC_000962.3 miniprot stop_codon 286898 286900 0 - 0 Parent=MP000047;Rank=1 +##PAF sp|P9WM95|Y030_MYCTU 109 0 109 + NC_000962.3 699930 33223 33550 327 327 0 AS:i:540 ms:i:540 np:i:109 da:i:0 do:i:0 cg:Z:109M cs:Z::109 +NC_000962.3 miniprot mRNA 33224 33553 540 + . ID=MP000048;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM95|Y030_MYCTU 1 109 +NC_000962.3 miniprot CDS 33224 33550 540 + 0 Parent=MP000048;Rank=1;Identity=1.0000;Target=sp|P9WM95|Y030_MYCTU 1 109 +NC_000962.3 miniprot stop_codon 33551 33553 0 + 0 Parent=MP000048;Rank=1 +##PAF sp|P9WMA1|Y025_MYCTU 120 0 120 + NC_000962.3 699930 29244 29604 360 360 0 AS:i:571 ms:i:571 np:i:120 da:i:0 do:i:0 cg:Z:120M cs:Z::120 +NC_000962.3 miniprot mRNA 29245 29607 571 + . ID=MP000049;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMA1|Y025_MYCTU 1 120 +NC_000962.3 miniprot CDS 29245 29604 571 + 0 Parent=MP000049;Rank=1;Identity=1.0000;Target=sp|P9WMA1|Y025_MYCTU 1 120 +NC_000962.3 miniprot stop_codon 29605 29607 0 + 0 Parent=MP000049;Rank=1 +##PAF sp|P9WMI1|RAMB_MYCTU 474 0 474 - NC_000962.3 699930 554884 556306 1419 1422 0 AS:i:2442 ms:i:2442 np:i:474 da:i:-1 do:i:0 cg:Z:474M cs:Z:*gtgM:473 +NC_000962.3 miniprot mRNA 554882 556306 2442 - . ID=MP000050;Rank=1;Identity=0.9979;Positive=1.0000;Target=sp|P9WMI1|RAMB_MYCTU 1 474 +NC_000962.3 miniprot CDS 554885 556306 2442 - 0 Parent=MP000050;Rank=1;Identity=0.9979;Target=sp|P9WMI1|RAMB_MYCTU 1 474 +NC_000962.3 miniprot stop_codon 554882 554884 0 - 0 Parent=MP000050;Rank=1 +##PAF sp|P9WNB3|ECC1A_MYCTU 747 13 708 + NC_000962.3 699930 345676 347758 711 2160 0 AS:i:874 ms:i:874 np:i:355 da:i:-1 do:i:1866 cg:Z:60M3I17M1D74M9I123M2I10M2D6M6D16M2D9M3I16M9D50M2I16M1D5M3I6M1D7M1I115M1I72M2I37M2D8M1D22M cs:Z::1*agcR*agcL*cacT*cagP:1*accE:1*atcS*atcL*gagT*gcgP:1*cccD*gagD:1*cctG*cggI*gtgD:4*ctgG*ctaV*cgaQ*cgaK*gcgI:3*ctgV*atcM:1*atcG*ctcA*atcM*gtgL:3*gtgA*gcgI*ctgM:2*accG:1*atgT:1*gtgQ*attL:2*cagY*acgM:1*ttcM*ttcM:1+LMM*tttI:1*ctgM*ctgM*ttgV*gcgG*gccG*accL:1*ctcG*tacS*cgcT:1*aacG*gacG*aagG:1-atg*cgcK*accV*gagP:1*gtcI*gacN:1*gaaD:1*gccK*gacE:5*tcgA*gtgG*gtgL:1*gacT*aacR*attV*cggT*gccS*cagS:1*gccT*gagS:1*cggV:1*agcF*gcgF*ttgS*tggY*tctH*catA:1*gacH:1*acgE*gcgD:1*gcgL:1*gtgI*ccgV:1*tcaT*cgtQ:3*gagS:1*gacP*ccgA*cacN*gacA*cccD*gacF*tttY*ttgA*gtgA*ttgT:1*gccI:1*cggI*cacG*acgD*gtaQ:1+AVDRLLKPA*ctgV*gctG*actG*acgE:1*cgaA*gtcA*aacA*gacS*accA:1*gacP*gagQ*atcP*gacF:6*agtM*gcaW*ttaV*cgcV*agcK*ctgF:1*gacR:1*cagH*cgcG*agcL:1*ggcH:1*gtgC:1*accK*gggL*atcL*gacQ:1*accR*aagT*gttF*tcgP*ccgT:1*accA*gtgI*ctgG:1*gagD*cgcL:1*cagG*gtgA*cgcA*gcgG*gtgL*ttaM*cgcT:1*tggM:1*gctC*cagH*gcgL*gtgA*accV*tggF:1*gacP:1*acgD*gtgL:1*gggQ*gtgI*gcgR*ctgV*gccL*gcgT*cgtE*gatE*ctgP*gagD*ggtD*cgcP:2*aacS:8*gacQ*attH*cccQ*ggcT*cgcE*ctcT:2*ctgA:1*ccgS*gccT:1*aatL*ctgI*tcgF:1*gatR*cccQ*gacE*gagG:1+SD*atcL:1*ctgA*ctgR:2*gtcH*ctgA*gcaP:1-cgcccg*gcgS*tttL*accP:1*cagG:1-acagatgcgttgcggcac*ttgY*ctgV*atcV:3*gacL*ccgT*gacG*tacG*gacK*ctgA:1*gcaF*tcgP:1-ctggcg*gtgD:7*gtgI+TLG*cacN*tgcH*tcgR*gccG:2*ccgY*cacR*cggI*gaaR*cagV*tatH*tcgE:1*ccgG*gaaT-aagccgatcctgcgggtggctcacggc:1*atcD*gaaD:1*tggL*cagP*acaN*ggcQ*ggcS*tggF*cagR*cccQ*tacV*atcT*gacS*gccV*gccT:1*caaR*ttcM:1*gctP*gatQ*gagQ:1*gccS*cacR*ctgI:2*cgaK:1*tcgA*cggG:1*gacS*tccI*aacT*cccG:1*catI*gccL*gggD*ctgK*cgcT:1*gcgR*gccV*actQ*cgcK+KV*ggcA*gcgT*agtD*ttcW*accH*acaQ:1*ctgV:1*atcA*gagQ*gacS*gcaV*tccE*cgaE*ctgI-gat*gtgT:1*gcgS*ctgR:1+RMY*gcgT*ccgD*cgaT*cgaD:2-gag*gagR:1*cgcK*gtgI:1*atcF:1+H*gtcE*actL*ggcK:2*gagN*ccgV*ctgM*atgY*ttcL:1*ctcI:1*gacE*gaaG:2*ggcF:1*atgA:4*ctgM*atgL:2*atgT:6*cagE*actF:1*atgR*tcgT*attL*ctgI:3*ttgV*accA*acaM*cacT*tccH*gcgP*gagD*cggQ*ctcV*atcN*gtcL*atcL*tacL*gccT:4*gagG*gccS*ggcT*gccF*gacL*agtG*ttcM*cgaE*gatK*ttcL:1*cagH*gtgT*gttA:2*atcV*tcgT:4*aagE*aagA*tcgE:1*gctV*gatS:1*ttcM*gccG*gacE*acgV:1*cgcT:2*gtgL*gctD:2*gagQ*atgS*ctgI:2*gagQ:2*cgcM:2+G*cagA*ggcA*agcG:1*ttcL*aacS*tcgG:1*ctcA:3*aacK*gccY*atcR*gccE*gcaR:1*catA*agcD:3*atcL:6*gccV:3*accA*ttgE*atgL:1*gccQ*gatS:2*gaaD*tacF*gcgI*gagG:3*tatR*gtgI*gccC:1*aagV:3*tttL:1*atcV:1*atcL:1*ttcL:1*tccT:1*acaS:1*gacQ*gtgT:1+GV*aagR:1*aaaD*gacK*atcL*gacE*aagP:1*accL*gccT:3*gggA:1*aaaR*gtgT*gccT:1*cccS*agcH*gttE:1*cgcK*cagA*atcV:2*gtgT*gagP*gacE:1*tacQ*cacY:1*gagT*tcgN-ggcaaa*gaaK*cacE*aaaS:5-gtg*cccR*gcgV*cccG*ggtM*gccE*accD:1*ataV*aggK:1*cgcS*agcT*accF:1*gtcI*gacS:1*atcP:1*gaaM:2 +NC_000962.3 miniprot mRNA 345677 347758 874 + . ID=MP000051;Rank=1;Identity=0.3292;Positive=0.4931;Target=sp|P9WNB3|ECC1A_MYCTU 14 708 +NC_000962.3 miniprot CDS 345677 347758 874 + 0 Parent=MP000051;Rank=1;Identity=0.3292;Target=sp|P9WNB3|ECC1A_MYCTU 14 708 +##PAF tr|Q79FA2|Q79FA2_MYCTU 77 0 77 + NC_000962.3 699930 349934 350165 171 231 0 AS:i:294 ms:i:294 np:i:62 da:i:0 do:i:1308 cg:Z:77M cs:Z::1*gccT:4*atgF:12*aatA:4*ggtA:2*gtgQ:3*acgA*gccE:1*agcT*cagS:7*acgA:1*gcaQ:2*agtT*gggA*ctaV:1*gggA:2*cctQ:1*tggG:2*cagE:5*tggA:8*gtgL:1 +NC_000962.3 miniprot mRNA 349935 350165 294 + . ID=MP000052;Rank=1;Identity=0.7403;Positive=0.8052;Target=tr|Q79FA2|Q79FA2_MYCTU 1 77 +NC_000962.3 miniprot CDS 349935 350165 294 + 0 Parent=MP000052;Rank=1;Identity=0.7403;Target=tr|Q79FA2|Q79FA2_MYCTU 1 77 +##PAF tr|Q79FF3|Q79FF3_MYCTU 354 4 349 - NC_000962.3 699930 367994 425388 576 1059 0 AS:i:819 ms:i:940 np:i:237 da:i:417 do:i:1842 cg:Z:36M2D29M50247V142M4D1M5005V25M2D9M1101U13M3I84M cs:Z::1*ggcR:1*accF:1*aacS*ggaQ:1*atcL:1*atcS:2*accI:1*accS*ggcT:1*atcV:1*ttcS:2*accI:1*aacS*ggaT:1*atcV:1*atcS:1*ctgN*accI:2-accatg:1*gggN:2*ggcN*tggG:1*tcgN:1*accN*ggcF:1*atcF:1*ctaS*ttcG:1*tccT:1*accS*ggcN:6*tccT:1*acS~cg50244ag-c*aacG:1*gtcF:6*agcN:2*gtcI:6*aacD:4*ttcI:1*agcG*ttcL:4*cacG:3*ctgF*ttcG:3*agcT:12*ttcV:1*atcF:5*ggaA:1*ttcT:1*ctcF:2*acgA:1*agcN*accV:3*tggF*ttcW:1*accG:1*gacS*gtcT:3*ggcL*ttcA:1*ccgA:1*agcA*tacG:3*aacF:1*aacD*accA:4*accF:2*ttcL:4*tacI:1*accS*ggcS*tacF*ttcG:1*accS:2*tacG:1*actS:1*gtgF*gccL:1*accA:1*aacD:2*accS:1*gccV*ttcG*atcN:2*aacD-tacagcaacggc:1*ttN~gt5002ag-c:3*ttcG:3*gacN*ggcI:8*aacT*ttcL:3*aatF:1*aatS-accggc*agcA*ttcM*aacT*accQ*ggcA:1*ttcP:1*gcgS*gG~gt1098ag-ga:3*tcgA:4*gtgS:1*atcF:1*aacH+NDP*accA:1*accS*gcaG:1*ttcS:2*gcaQ:3*agcF*ttcG:1*accS:1*ctcY*gggV:2*ggcS*agcT:1*aacS*acgM*ggcF*ctgG*ttcG:1*ccgS:1*aacV*gtcL:3*gtcY:2*accS:1*agcF*atcY:1*accA*ggcA*agcV*atcN:3*agcI:1*aacV:2*agcV*accM*aatS*accS:1*agcF:2*ctcF:1*gatT*cacG:1*accS:1*agcL*ttcL*aacV:2*gacN*tacG*aacL*acgS:1*tacF:1 +NC_000962.3 miniprot mRNA 367995 425388 940 - . ID=MP000053;Rank=1;Identity=0.5439;Positive=0.6714;Target=tr|Q79FF3|Q79FF3_MYCTU 5 349 +NC_000962.3 miniprot CDS 425186 425388 172 - 0 Parent=MP000053;Rank=1;Identity=0.5000;Donor=CG;Target=tr|Q79FF3|Q79FF3_MYCTU 5 69 +NC_000962.3 miniprot CDS 374498 374941 468 - 1 Parent=MP000053;Rank=1;Identity=0.6149;Target=tr|Q79FF3|Q79FF3_MYCTU 70 213 +NC_000962.3 miniprot CDS 369386 369495 96 - 1 Parent=MP000053;Rank=1;Identity=0.5676;Target=tr|Q79FF3|Q79FF3_MYCTU 214 248 +NC_000962.3 miniprot CDS 367995 368287 204 - 2 Parent=MP000053;Rank=1;Identity=0.4600;Target=tr|Q79FF3|Q79FF3_MYCTU 249 349 +##PAF tr|Q79FF3|Q79FF3_MYCTU 354 6 349 - NC_000962.3 699930 367994 434049 603 1098 0 AS:i:880 ms:i:937 np:i:237 da:i:180 do:i:1842 cg:Z:34M3I7M1I72M11D14M10D24M3636V78M2D8M61348U13M3I84M cs:Z::1*gtcF:1*aacS*ttcQ:4*gccG:3*aacS*ggcT:1*atcV:7*tccT:1*atcV:1*tttS:2*gtgI:1*cctD+TNF:1*ttgN*accG*gcaN*gcgN*ctgG:1+F:1*atcF:1*ttcS:15*aacG:1*atcF:6*gacN*ggcN:1*cgaI:6*agcD:1*ttgQ*ttgI:1*ttcI:6*accS:4*ctgF*ttcG:8*atcL*ggcF:5-aactggggcattggcaactcgggcaacagctac:1*accV:6*gacT:5-ttcaactccggaatagccaacaccggcgtc:5*tacV:3*agcF*tacW:1*ccgG:1*aacS*agcT:3*ggcL*ttcA:1*atgA:1*caA~gt3633ag-c:2*agcT:1*ctgF:1*aacD*tctA:1*accN*aacY:1*atcF:1*ttgS*ttcL:1*tcgA:1*accN*ggcI:1*atcS*ggcS*atcF:4*accD:2*tggS:1*atcF*gccL:1*accA:2*accV:1*accS:1*atcV*ttcG:1*accA:7*ctcG:1*gccS:2*gtcI:3*atcG:2*accP:1*catT*tacL:3*agcF:1*aacS:1-ggcagc*ttcM*aacT*acgQ:2*ttcP:1*ccgS*gG~gt61345ag-ga:3*tcgA:4*gtgS:1*atcF:1*aacH+NDP*accA:1*accS*gcaG:1*ttcS:2*gcaQ:3*agcF*ttcG:1*accS:1*ctcY*gggV:2*ggcS*agcT:1*aacS*acgM*ggcF*ctgG*ttcG:1*ccgS:1*aacV*gtcL:3*gtcY:2*accS:1*agcF*atcY:1*accA*ggcA*agcV*atcN:3*agcI:1*aacV:2*agcV*accM*aatS*accS:1*agcF:2*ctcF:1*gatT*cacG:1*accS:1*agcL*ttcL*aacV:2*gacN*tacG*aacL*acgS:1*tacF:1 +NC_000962.3 miniprot mRNA 367995 434049 937 - . ID=MP000054;Rank=2;Identity=0.5492;Positive=0.6475;Target=tr|Q79FF3|Q79FF3_MYCTU 7 349 +NC_000962.3 miniprot CDS 433532 434049 496 - 0 Parent=MP000054;Rank=2;Identity=0.6045;Target=tr|Q79FF3|Q79FF3_MYCTU 7 161 +NC_000962.3 miniprot CDS 429633 429898 237 - 1 Parent=MP000054;Rank=2;Identity=0.5393;Target=tr|Q79FF3|Q79FF3_MYCTU 162 248 +NC_000962.3 miniprot CDS 367995 368287 204 - 2 Parent=MP000054;Rank=2;Identity=0.4600;Target=tr|Q79FF3|Q79FF3_MYCTU 249 349 +##PAF tr|O06393|O06393_MYCTU 324 0 324 + NC_000962.3 699930 619890 620862 969 972 0 AS:i:1674 ms:i:1674 np:i:324 da:i:-1 do:i:0 cg:Z:324M cs:Z:*ttgM:323 +NC_000962.3 miniprot mRNA 619891 620865 1674 + . ID=MP000055;Rank=1;Identity=0.9969;Positive=1.0000;Target=tr|O06393|O06393_MYCTU 1 324 +NC_000962.3 miniprot CDS 619891 620862 1674 + 0 Parent=MP000055;Rank=1;Identity=0.9969;Target=tr|O06393|O06393_MYCTU 1 324 +NC_000962.3 miniprot stop_codon 620863 620865 0 + 0 Parent=MP000055;Rank=1 +##PAF tr|O07256|O07256_MYCTU 261 0 261 + NC_000962.3 699930 397441 398224 780 783 0 AS:i:1393 ms:i:1393 np:i:261 da:i:-1 do:i:0 cg:Z:261M cs:Z:*ttgM:260 +NC_000962.3 miniprot mRNA 397442 398227 1393 + . ID=MP000056;Rank=1;Identity=0.9962;Positive=1.0000;Target=tr|O07256|O07256_MYCTU 1 261 +NC_000962.3 miniprot CDS 397442 398224 1393 + 0 Parent=MP000056;Rank=1;Identity=0.9962;Target=tr|O07256|O07256_MYCTU 1 261 +NC_000962.3 miniprot stop_codon 398225 398227 0 + 0 Parent=MP000056;Rank=1 +##PAF sp|O53666|FADE5_MYCTU 611 0 611 - NC_000962.3 699930 293800 295633 1830 1833 0 AS:i:3117 ms:i:3117 np:i:611 da:i:-1 do:i:0 cg:Z:611M cs:Z:*gtgM:610 +NC_000962.3 miniprot mRNA 293798 295633 3117 - . ID=MP000057;Rank=1;Identity=0.9984;Positive=1.0000;Target=sp|O53666|FADE5_MYCTU 1 611 +NC_000962.3 miniprot CDS 293801 295633 3117 - 0 Parent=MP000057;Rank=1;Identity=0.9984;Target=sp|O53666|FADE5_MYCTU 1 611 +NC_000962.3 miniprot stop_codon 293798 293800 0 - 0 Parent=MP000057;Rank=1 +##PAF tr|O53705|O53705_MYCTU 298 0 298 - NC_000962.3 699930 447149 448043 891 894 0 AS:i:1525 ms:i:1525 np:i:298 da:i:-1 do:i:0 cg:Z:298M cs:Z:*gtgM:297 +NC_000962.3 miniprot mRNA 447147 448043 1525 - . ID=MP000058;Rank=1;Identity=0.9966;Positive=1.0000;Target=tr|O53705|O53705_MYCTU 1 298 +NC_000962.3 miniprot CDS 447150 448043 1525 - 0 Parent=MP000058;Rank=1;Identity=0.9966;Target=tr|O53705|O53705_MYCTU 1 298 +NC_000962.3 miniprot stop_codon 447147 447149 0 - 0 Parent=MP000058;Rank=1 +##PAF tr|P96281|P96281_MYCTU 728 0 728 - NC_000962.3 699930 522349 524533 2181 2184 0 AS:i:3579 ms:i:3579 np:i:728 da:i:-1 do:i:0 cg:Z:728M cs:Z:*gtgM:727 +NC_000962.3 miniprot mRNA 522347 524533 3579 - . ID=MP000059;Rank=1;Identity=0.9986;Positive=1.0000;Target=tr|P96281|P96281_MYCTU 1 728 +NC_000962.3 miniprot CDS 522350 524533 3579 - 0 Parent=MP000059;Rank=1;Identity=0.9986;Target=tr|P96281|P96281_MYCTU 1 728 +NC_000962.3 miniprot stop_codon 522347 522349 0 - 0 Parent=MP000059;Rank=1 +##PAF tr|P96396|P96396_MYCTU 537 0 537 + NC_000962.3 699930 256063 257674 1608 1611 0 AS:i:2846 ms:i:2846 np:i:537 da:i:-1 do:i:0 cg:Z:537M cs:Z:*ttgM:536 +NC_000962.3 miniprot mRNA 256064 257677 2846 + . ID=MP000060;Rank=1;Identity=0.9981;Positive=1.0000;Target=tr|P96396|P96396_MYCTU 1 537 +NC_000962.3 miniprot CDS 256064 257674 2846 + 0 Parent=MP000060;Rank=1;Identity=0.9981;Target=tr|P96396|P96396_MYCTU 1 537 +NC_000962.3 miniprot stop_codon 257675 257677 0 + 0 Parent=MP000060;Rank=1 +##PAF sp|P9WJQ5|MOEA2_MYCTU 405 0 405 - NC_000962.3 699930 526145 527360 1212 1215 0 AS:i:2043 ms:i:2043 np:i:405 da:i:-1 do:i:0 cg:Z:405M cs:Z:*gtgM:404 +NC_000962.3 miniprot mRNA 526143 527360 2043 - . ID=MP000061;Rank=1;Identity=0.9975;Positive=1.0000;Target=sp|P9WJQ5|MOEA2_MYCTU 1 405 +NC_000962.3 miniprot CDS 526146 527360 2043 - 0 Parent=MP000061;Rank=1;Identity=0.9975;Target=sp|P9WJQ5|MOEA2_MYCTU 1 405 +NC_000962.3 miniprot stop_codon 526143 526145 0 - 0 Parent=MP000061;Rank=1 +##PAF sp|P9WKV9|Y477_MYCTU 148 0 148 + NC_000962.3 699930 566775 567219 444 444 0 AS:i:784 ms:i:784 np:i:148 da:i:0 do:i:0 cg:Z:148M cs:Z::148 +NC_000962.3 miniprot mRNA 566776 567222 784 + . ID=MP000062;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKV9|Y477_MYCTU 1 148 +NC_000962.3 miniprot CDS 566776 567219 784 + 0 Parent=MP000062;Rank=1;Identity=1.0000;Target=sp|P9WKV9|Y477_MYCTU 1 148 +NC_000962.3 miniprot stop_codon 567220 567222 0 + 0 Parent=MP000062;Rank=1 +##PAF sp|P9WMG1|Y890_MYCTU 882 0 878 + NC_000962.3 699930 464028 466662 1509 2652 0 AS:i:2298 ms:i:2287 np:i:610 da:i:126 do:i:3 cg:Z:39M1D273M1D108M2I2M3I34M2D125M1D15M1I34M1D242M cs:Z:*gtgM*cacR*cggA:1*gtgL*accA*gatQ:6*accC:1*gccT:9*gcgI:1*ctcI:1*gcgS*cagA*atcS*gccE*ggtL*gagR*ttcD:1*cgcL*gcgC-tgg:8*gacE*cccS*gacG*ttgI:1*ccgA*gtcA:1*gtgA:1*ggcR:1*ctgV:2*cacP:7*acgM:1*accS*gtgL*ctgR:2*cttI:1*gggN:1*ccaR*gccM:1*gtgM:11*acgC:4*ttaV*gcgE:1*gtgL*aaaG:2*cggP*gggE*gtgL*aggT*ttgI:3*tgtS:3*ctcI*cggG*gtcM*gagA:2*gtgI*agcT*tacW:4*ctgM:1*ctgI*agcT:5*atgL:1*tgcA*tacD:2*cagS:2*cggQ:1*gacG:1*cgcT*ctcI*accA*gacN*gacH:1*tccA:3*accG:3*aaaR:4*ttgI:5*ctgF:4*ctgV:3*acgS*cttP*gacL:2*atcA:3*cgtD:1*cggC:1*gcgR:2*accA:2*gcgV:1*acgG:1*gcgV*cacQ:5*tggR:2*gtgI:3*tacH*acgA:4*ccgT:1*cgtQ*accI:6*gtgP:3*tgcG:1*tttD*gtcL*gacA*gacA*gcaV*cagR:3*tgcA*agcG*ggcS:1*gtgL*cagD*cgcP*tacF*cagS:3*gagQ*atcL:9*atgV:3*aacC*agcQ:3*tgcR:3*tgcL:2*atgV:1*cacR:6*tccG*gagD*gctS:2*gtgA:1-gcc:1*tttH:12*aggS*gtcL*gacN*aatT:1*ggaA*cccD*tccN:1*tatH*tcgQ*cacR*tgcL*ctcV*gacA*caaR:12*gtgA:1*aacS:3*tccG*gacH*accI*gagT*ggcE:2*gcgQ:5*ttgQ*cggP*gtaI:1*atgF*acgG:1*gggA*cgcH*atcL*cagR:2*cgcL*gccS:2*gacN:3*gccE:1*gagQ*aatR*gcgF*cgtH*catR:1*gagA:1*gcgS*gccT:11*ctgM:1*gacS+TW*atcL*ttcA+TSP:1*gacG:1*gccT*gccD*ggtI*atgI*gagA*cagP:5*gtgA*atcM:4*gatG*gaaD:2*ctgA:1*tccV:7-ttgatc*gcgC*gtaS*gcgS*gtaG*gctY*cgcN:1*gatE:3*tctP:5*atcT:5*gtaI:2*cggK:1*aggT:1*gccC:3*accY*tttW*cagR*gcgG:1*gatG*gcgT*gtcC*gtgI*gcgS:3*gtcN:1*gcaL:1*ccgA:2*caaE:1*gcaC:1*gagD:2*gccD*gcgT:3*cacR*tccF*aatV*gcgS*ctgR*tggH:1*cgcS*tggL*tgtW:1*ggcS*tacL:2*ctgM*atgW*cggA:1*gagN:1*gccT*gcgE:1*gccL*gccE*caaL*ttcS*ggcR:1*gtgI*gtgT*gacA:5*cagN*gaaD:1*ctgP*cacT:1*gccV*aacL*agcG:1*cagY*ggcT*ctgQ:1*ttcQ*gcgV:3*cagC:1-gaa*ttgA:3*aggH:1*gcgI:1*gacG:1*gctC*ctcI*gagA:2+T:3*gagG*tacV*ttcY*gcgQ:1*atgI:2*tcgA:1*ttgM:1*acgY:8*cagT*acgA:1*caaL*catE:2*gagD:2-tgg:1*aacP*ttgI*agtL*ttgR:1*ctgQ:1*ctcD*tcgQ*gcaV*gcgT*gtgM*cagH*cgcQ*gcgV*ttcL*aatM:2*gctL:6*cttA*agcI:3*cgtQ*tggF*tgtA*gacN:3*cagD*tcaA*atgT*accN:1*catW:1*ctgR*gcgM*atgV:2*gcgT*actI:3*atcV:1*gtcT:1*gagR:1*aagE*cggP:1*gaaL:1*gaaR*cgcD:3*aagA:4*gcgG:2*agcL*gggH*gcaI*cacY*ctgQ*gatG*ctcM:2*gtgA*ctcM:1*tgcL:5*agcG*gacE*gccV:1*accS:1*catS*gcgE*gcgG*gcaV:2*ttcL:3*gagA:1*atcL:3*atcT*ggcR*tcgQ:3*gcgK:1*tacW*cgtD*tcgA*gacG:1*gtgQ*cagA:6*gatE:3*gagD*aaaE:3*gctR:9*atcT*aagD:1*acgA:7*cacR*tccG*tggE:5*accR:2*gaaG:6*attR:6*ggcS:3*gccS:5*acgK:17*accA:3*ttcL*accP:2*ctgV:2*gctV*caaD*gcgE:4 +NC_000962.3 miniprot mRNA 464029 466662 2287 + . ID=MP000063;Rank=1;Identity=0.5690;Positive=0.6900;Target=sp|P9WMG1|Y890_MYCTU 1 878 +NC_000962.3 miniprot CDS 464029 466662 2287 + 0 Parent=MP000063;Rank=1;Identity=0.5690;Target=sp|P9WMG1|Y890_MYCTU 1 878 +##PAF sp|P9WPS5|CTPI_MYCTU 1632 0 1632 - NC_000962.3 699930 125645 130541 4893 4896 0 AS:i:8150 ms:i:8150 np:i:1632 da:i:-1 do:i:0 cg:Z:1632M cs:Z:*gtgM:1631 +NC_000962.3 miniprot mRNA 125643 130541 8150 - . ID=MP000064;Rank=1;Identity=0.9994;Positive=1.0000;Target=sp|P9WPS5|CTPI_MYCTU 1 1632 +NC_000962.3 miniprot CDS 125646 130541 8150 - 0 Parent=MP000064;Rank=1;Identity=0.9994;Target=sp|P9WPS5|CTPI_MYCTU 1 1632 +NC_000962.3 miniprot stop_codon 125643 125645 0 - 0 Parent=MP000064;Rank=1 +##PAF sp|P9WQ45|FAD25_MYCTU 583 0 583 + NC_000962.3 699930 483976 485725 813 1773 0 AS:i:1245 ms:i:1245 np:i:358 da:i:0 do:i:6 cg:Z:6M5I55M3D84M3I15M1D201M2D17M1D41M1D156M cs:Z::3*ataV*tccE*acgS+SLPGV:2*gacE:2*accS*acgF*actQ:1*agcN:1*gaaK:1*tttL*gtgT:1*atgI:2*gacE*acaR*aaaS*accW*ggcD*gacG*caaV*attE*gacE*cgaT*atgL:6*tctR:1*gtcT*accL*gccN*gtgL*tctA:1*tatQ:1*ataR*agtE*tatH:1*cggS*catT*gctG:2-cgaaggacc:1*gcgL:1*tcaL:3*ggtS:4*gcaV*ggaS:1*ctaI*ggaA*gcaS:1*tgcQ:2*tggI*acgV*ccgA:3*ccaS*gaaI:1*ctgQ:1*agcG*ctaA*cgcH:1*aagE:2*ggaV*ctgS*gctV*gtaF*ctcA:1*tgtT:1*gccP*gacA*gtcI:3*acgA:1*caaS*gccV*gaaV*acgD*cggN:1*aggV*gccE*acgY*ataV*gctQ*acaP*catQ*gggP*gcgG*tctQ*gtaN*actA*acgP*ccgA:2*gcgE*ttgV:1*acaR:2+LDA*gagR:2*ggaS*gatG*aacS*tgtR*gatS*ctcA*gatA*tctH*caaG*ctaH*tcaP:1-tgg*agtI*tcgL:9*gccR*aacT:1*cgtA:2*gttM*ttaV:1*atgN*cgtK:1*gttL*acgF*gaaA:1*gtcF*gacE:2*atcM*cgtT*aacS:1*tttY*cgcG*catV*gagY:1*ggcK*gcgV*ccgA*aggP*ttgP*cccG:1*tcgT:6*cttF:5*ttaF*atgV*gttL:2*tttI*attL:1*ttgI*tttL*gtcA:1*tgtI:1*gttA*atcV:4*gagI*gcaG:1*atcL*cgtQ*aagR:4*atgI:1*ctgM:2*aaaS*cacN*cagT*gcgL*ccaA:1*tcgT:10*gtcS*gctR:2*tccK*gaaD:3*gcgE:5*cacG:1*aatH*acaG:1*atcL:2*gcgS:1*cagR:3*aatV:1*ataL*accK*aaaR:1*ctcI*cgcD:2*cgtA:1*tacF:2*atgD:1*gcaK:1*gtcI*aagR:8*gtgT:2*ctgV:2*acgR:3*tcaQ:2*acgK*tcaI*accV*gagQ:2*gctP*gatQ*agcK:1*gctP*cgaD:1*cacQ:2*ctaR*agtT-actttc:1*actS*gagD*cgtG*gcaG:1*cgtP:1*ataV*cgcS:1*cacG*agcI*gacV:1*aagT*gaaQ-ccg:1*cttV:6*tcgT*aatG:2*ctcR*ggaP*ccgA:1*cgtT:5*attV:2*aagD:2*tctA*accI:2*cacW*aatQ*gcaK*gacP*gacE:1*ctcT*aatE:1-gat*aagT:1*cagS:1*agcT:1*cggV*gagN*gccP:1*gcgE:3*aggA*tcgG:7*ttgS:2*ataL*gtaS*ggaE*gatG:1*ttcL*tacF:1*gtcM:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatS:5*actA:1*gtcI*aagQ*gagT*tttI*accS*ggtP:2*gtcC:2*tttI*tcaA:2*gacE*gacH:1*gtgA:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagK*catD*gggE*cccS:1*aaaD*gtgE*actA*attA*atgE*gatR*ttcL*tcgG*acgF*atcV:2*ctgE:1*gtaT:2*ttgI:2*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgS:2*gcgS*ctaI:1*aagI:6*agcR:2*gcaQ:1*gcaV*aagE*cagL:1*ggaR*gcaQ*aatD*aagE*ttgF*caaT:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483977 485725 1245 + . ID=MP000065;Rank=1;Identity=0.4585;Positive=0.6058;Target=sp|P9WQ45|FAD25_MYCTU 1 583 +NC_000962.3 miniprot CDS 483977 485725 1245 + 0 Parent=MP000065;Rank=1;Identity=0.4585;Target=sp|P9WQ45|FAD25_MYCTU 1 583 +##PAF sp|P9WQE5|PPSB_MYCTU 1538 0 1214 + NC_000962.3 699930 479501 590277 1371 3795 0 AS:i:1515 ms:i:1658 np:i:655 da:i:684 do:i:690 cg:Z:30M6451V39M6I2M5I90M1D188M3D72M1D28M6D39M1I51M1I55M1D8M1D69M2I128M1D4M4I21M8I29M6D10M1I19M1I11M3I21M5I17M4I4M18132N40M11D36M6D16M4D9M45370N1I30M5D4M3D8M33716N26M1I5M3459V21M2D11M4I24M cs:Z:*cacM*cgcM:1*cgcT:1*gccF*acaS*gccR*gtgI*gccS*gtgG*cagM*ctgT*catA*tccQ:1*cagR*tccT*gagS*ttcL:1*gaaD*ctgE:1*ggcD*caaR*atcV*gcgS:1*gacI*cgA~gt6448ag-c*ataV*aacA:5*atcV:1*gtgI:7*attV:4*cggS*ctaF:4*accV*gagA*aagG*aagR*tgtN:2*acaS*gcgT*tatV:1+ADRWDA*gatE*cgtA+FYHPD*gggP*ttcL:1*aatP*gctG*ggaR*actM*ttcT*gcgT*gagK*tccW:3*ttaV*aagP:6*aatA*agaE:2*gatG:1*ccgT:1*gacR:2*ctgA*cgaA:6*ttgM:4*tctA:9*attP:1*gagD:2*agaG*cttG*tcaT:2*ggcA:1*ttcM*gttM:2*tcgY*tcaF*actN*gacE:1*gtcQ*cggS*cttM*gtgL*tcaA:2*gctP:1*caaN*aagV*tctD*actA-att*tggY*gatS*aacG:2*ggtN*tctA*tcgH:2*attT*gccV*aatG:4*tttL:1*gatG*attL*cagR:2*tccA*attV*gtcA*attV:15*cgaQ:2*agtR*accL*tggR*gacE*tgcT:1*atcL:2*gtcA:2*acgV*aatS*gttI*cttT*attL*tcaR:2*ccaT*tggQ*ggtI*gggA*tttI*aggS*gaaA*gcgW:1*atcL:2*cagP*acaQ:1*tgcR:1*cacA:3*aaaA*tccA:3*atgF:5*tgcA:2*atcV:2*cagK:2*agtT:2*cgcV*cttR*gagD:1*cggD*cggQ*ataV:2*attV*ctgV*acgR:8*aagR:3*attV*atgT:3*cctT*agtA:2*attC*ggtD:1*cttI*gaaA*aatD:1*tgcL*aagR:1*gctG*cgcD:1*gatA:1*ctgD*gaaS*atcV*ggcN:9*tcgV:3*aggP:2*gcgF*cacE:2*ggcA*atgA*gtcT*tttY:1*cgcH-aagagaccg:1*tctG*gggD*cccA*ctgC*atgA*atcL:1*agcA*atcV:1*ccgT:6*ggtA:6*ttgF:3*gtgT:1*atgA:1*gagQ:1*ggcA*tcgT*ctgI*cttP:1*agcN*gggL*gggH:1*acgS*gagQ*ccaW:4*ccaD*ttcA*acgA*gaaS*ttgT*ggcR*ctgF*agaF:1*gtaP*gacT*gaaQ*cttN*cagS*gagP:2*gtgT*gtgA*gcgE:1-cgg:4*gggA:5*tttL:8*gtcI:1*gaaQ*gctG*ggtS*tcgE*gttL*gggA*gcgP-gacacggtttcgggccgc*gcgV*gatS*gttE:2*tccE*ggtD*ggtT:2*gtgS*gcgT*tggL:1*attV*tcgT:4*tcgQ*gcgR*ttgM:2*cagT:1*ggtQ*cggV:1*gggA*cggD*tatW*gtgM*cggE*gctG*cggP*ccgG:1+E*cttV*gatA:1*gttA:2*gggA*tatH*tcgT*ttgV*gtgN*agcH*acgH:1*tcgA*gtgR*tttQ*gatA*catT*cggF*gcgG*gtgT:2*ggcA*cagR*actD:1*gatA*gagQ*ttgA*ctgI:3*gctR*gggA*gtgL*gttA:2*cggQ*ccgH*gagA*gctP:3*tgcS*ggtH*gttQ+D:1*aagS:1*gcgG*ggcP*aagG:1*gctV:2*tttY*gccS:1*cagR:4*ctgA:3*agcR*gagQ:1*tatL:1*gccD*tacE:1*gttA:2*gagA:1*ctcV*gatA*gctE*gtgL*gtgE*gacP*gagV*ttgF*gacV*cggE*cacQ*ctgA*cggG*tatF*ccgS:5-tgg*gggA*cacT*gacG*caaK*gatE:1*ttgV*aatG-acc*accI:1*ttcQ*gccI:1*ccgL*gcgG:1*tttI*gcgG*gtgM*gagQ*gtgL*gcgT:1*tatT*cggE:1*ctcW*atgR:1*tggY:2*cggQ:1*ggtD:2*ctgI:3*gtgM:2*ttgV:3*cacV:5*tgtT*ttgP*ccgA*gatE*gcgG*gcgL*atgR*ctgV*gtgT:1*gcgT:1*ggaA:3*cagA*gcgP:1*cccS*gccG*ggcQ:1+GM:1*atgL*tttL*gcgG*gtgL*cagD:1*cgtA*gaaA*gacT:1*gtaA*gcgL*ccgI*atgA*ctgD*gggY*cacP*gatQ:1*agcT*atcV*gcgG*gcgI*gtcY:1*ggtS:1*gctR*tcgQ*gtgT:2*tctA:1*gccP*cacT*gatE*gcgQ*gtgI*agcD*gcgE*atcL*gctI*gatA:1*ctgV:1*ggcA:1*ggcN:1*cggF*gtcA*cacS:1*ttgV*gcgN*gtcI*tcgE*catV:1*tttP:1*tcgN*gcgP*ttgA:1*gagD*ccgA*atgL*atcQ*gctP*gagA*ttcM*acaR*gccS*gttE*gcgL:1*gaaD:1*tctT*gtgP*ggcR*ttgT:3*ccgG*gtcI:2*aatT*gtgT*accY*gggA*cagD:1*gtgH*gccT*gacQ*gacP*ttcI*gccF*tcaD:1*gatE*tacH:2*cggT*catN*atcM:1*gcgN*gtgP:3*ggcQ*gacQ*agtA*gttI*cgtA:2*cacG-tgc*gccS:2*agtD+GAYH*cgtT:3*gtcI*gggS*cccA*ggtH*ggcP*ggcL:2*tcgQ*ttgA:1*gagA*gcaD*tcgT:1*gccE:1+AHRPTKSA:1*cagK*atcY*gtgL:1*gtgI*cccG:2*cgcQ*aaaR:1*cggA*cccD*gaaD*ccgT:1*agtT*gtgF*atgR:1*gcgN*gcgL*gccY*cagT*ggcA*ttcD*gtcI*tcgA-gggatgggcctggattgg*gccH*tcgP*gtgP*tttH*tccT*gggC*tacH*cggP:1*aagE+P*cggH*gtgP*gagT*ttgI:2*tatT*gccP*ttcW:2*caaT*aagH*ttcH:1*ctcI:1*ccaT*gccT+H:2*gtcT*agcA*gacA:1*accE*gccD*gccP:1*cagS+NKV*atcV*gggV*gctN*agcG*gatQ*ggtS*ggtT*gctS:1*ctcS*ttgR:1*tccL*tccE*gggD*tttW*gccC*gccH*cggQ:2+WPIRP*ggtA*cggV:3*gagP*caaP*ctcS*gccT:2*atcW*gagL:2*tgtA*gagD+NELC:1*gccE*gcaL:1~gt18132ag:1*tcgA*cgtA*catD*gcaS*agcR*gcaV*aatD*gcgS*ggcL*tttS*gccP*aacP*aaaA*ggcL*cggA*gtgA*gccG*acgS*cccD*aggP*caaA*gttA*gtgL*aggL*gagD:1*cccL:2*cgcV*aacD*catN:1*aacL*gcgY*cgtA:2*aagV-cattcagcgcgccgtgccctaccggcactacgc:2*gtgE*cgtL*gcgL*gaaD*cctI*gacE*agaS:1*cacY*gctQ*attV*tggF*cccH:1*gacT:2*agcL:2*tcgA*accM*gccV*agcA*ctgS*gcgS*acaA*tcgT*aggA*gtcI*ttcS*gagP:2-tcatgtcgggcgccggtg*atcL*tcgF*acgI*accM*tcgT*gtcR*ggtN:1*gagQ*accP:1*gccS*gcgE*gcgG*gaaD:1-acctgggccagc*gtgA*ccgN*aacP:1*tccH:2*ccgL:1~gt45370ag+G:2*ctgR:1*actL:1*atcL*gtcE*gaaH:1*aagE*tacI:3*gtaI*tgcI*ctcD*aatL*gtcD*ggcD*tgtS*atcM:1*tccA*aagE*gcgL*ctgA*ttgV:1-aacgccgaactggtc:1*atcV*ttcL:1-aaggacgcc*aaaA:1*tttH:1*atcT*agcD:2~gt33716ag*ctcD*gggQ*ctgV*tgcV*cgaY*gctR*gatS:1*cttA:3*ggcP*ggtR*ccgL*cgaQ:2*gaaT*ttcL*cgaP:1*cgtK:2*ccgT+L*ggtN:1*caaD*agaA*gacS*cgQ~gt3456ag-g*atcL*gcgV:1*atcG*ggcA*ggcT:1*agcN:2*gagP*gcaH:1*ctgI*tcgR*ggtQ:1*ctgA:1*gcgM:1-cggcag*gtcA:1*gacT*ctgI:1*gtgA*gccM*gagA:1*atgK:1+GALD*gatE*cgcL*gccT*aacQ*tacC:2*cagA:1*tatG*tcgT*gtgD:1*gtgI*acgA*tcgV:4*gtgT*gagD*aacP:1 +NC_000962.3 miniprot mRNA 479502 590277 1658 + . ID=MP000066;Rank=1;Identity=0.3613;Positive=0.5178;Target=sp|P9WQE5|PPSB_MYCTU 1 1214 +NC_000962.3 miniprot CDS 479502 479593 22 + 0 Parent=MP000066;Rank=1;Identity=0.1935;Target=sp|P9WQE5|PPSB_MYCTU 1 30 +NC_000962.3 miniprot CDS 486042 488817 1487 + 1 Parent=MP000066;Rank=1;Identity=0.3934;Target=sp|P9WQE5|PPSB_MYCTU 31 977 +NC_000962.3 miniprot CDS 506950 507315 31 + 0 Parent=MP000066;Rank=1;Identity=0.1967;Target=sp|P9WQE5|PPSB_MYCTU 978 1078 +NC_000962.3 miniprot CDS 552686 552835 41 + 0 Parent=MP000066;Rank=1;Identity=0.3137;Target=sp|P9WQE5|PPSB_MYCTU 1079 1121 +NC_000962.3 miniprot CDS 586552 586646 24 + 0 Parent=MP000066;Rank=1;Identity=0.3030;Target=sp|P9WQE5|PPSB_MYCTU 1122 1153 +NC_000962.3 miniprot CDS 590103 590277 53 + 1 Parent=MP000066;Rank=1;Identity=0.3387;Target=sp|P9WQE5|PPSB_MYCTU 1154 1214 +##PAF sp|P9WQG3|ACDC_MYCTU 388 0 359 - NC_000962.3 699930 478655 479690 336 1083 0 AS:i:360 ms:i:360 np:i:171 da:i:63 do:i:87 cg:Z:36M6I16M1I31M1D90M6I19M1D32M1I74M2I45M cs:Z:*tccM*agcT:1*gagT*atcS*gccF*gtcI*cgcE*gacS*accE*gtcE:1*cggQ*ttcA*tgcL*gccR*gaaK*cacA:1*accA*ccgS*cacW:2*gcgN*tggY*ttcG*gagH*gacE*ggcY*gacY:1*ccgD*gtcK:2+KHEHTS*gatE:1*gccW*aaaA*cagE*ttcA:1*gaaK:2*ctgF:2*atgV*cagN:1+P*cacE*ggcE*cacY:1*tgtG:3*tcgG*gcgM*gtgY*cacE*tatL*ggcS:1*gccV*tgcM*cggE:1*ctgM*gagA:2*gacG:1*ggcA*atcL*cggL*tcgL*ctgM:1-tcg:1*cagS*ggtP*tcgA*ctgI*gcgN*atgG*ttcT*gccI:2*agcK:2*tccT:1*gagD:2*cggK*cagR:4*atgI:1*accD:1*gacS:1*ctcT*ggcM*tgcA:1*gggA*ctcI:4*gtcA:2*gacN*ccgS*gccH*gcgK*atgI*aaaT:1*cggT:5*ccgS:2*gtgI:1*accK:1*ggcQ:1*atgV*tggF:1*accS*aacG*ggcI*tcgD*gtcQ:1*gacQ*gtgA*gcgV*atcL:1*tggV*gccG*gccR*accS*gacE*gacE*ggaA*atcK*cgcT:1+KLRPAL:1*atcV:4*accA:3*accS*gccY*aacT*accP:1*ggtE*cacM*aagE:1-tcg*ctgV*cggS*gcgP*tcgE*atcR*accQ*agcF*gagQ*ctgV*gtgF:2*aatD:7*atgL*ctgV*cccG*ggcA*gcgE*accD*ggcA*ctcA*aggI:1*ccgQ:1+F:1*tgcG:1*tcgN*gagP*gcgE:1*tacI*gggM*atcG*gtcA*tggA*ggaS:1*atgV:1*gcgM*gccG:1*tcgF:1*tggL*cagG*tgcR:1*ctcV:2*gcgV*agaK*cagT:1*accK*cagV*ttcW*ggaS*cgtT:2*gccG*ggcA*ttcH:1*ctgG*accL*cagA*gccH*aagP:1*gtcA*gacQ*atgC*gccH*gtgI:1*ctgV*cacE*aagL*ggtA*cagK:1*ctgM*tcgT*ttgQ*catK*ctgA*gggA*cgcT:1*aaaY:1*aggH*gtgG*ggcD+DF*ctgG*cgcA*cccA*gatE*cagA*gtcA*agcN*ttcM*ggcA:1*ctcY*aacA*aacA*accA*cggE*gaaA*gcgS*ctcS*aaaR*atcA*tgcV*cggD*accQ:1*cgaV*acaQ*ataS*ctgM:4*ataL*tcgT*ctgK:2*ccgG:1*atcA*cggA*cacM:1*gtcT*aacS +NC_000962.3 miniprot mRNA 478656 479690 360 - . ID=MP000067;Rank=1;Identity=0.3102;Positive=0.4737;Target=sp|P9WQG3|ACDC_MYCTU 1 359 +NC_000962.3 miniprot CDS 478656 479690 360 - 0 Parent=MP000067;Rank=1;Identity=0.3102;Target=sp|P9WQG3|ACDC_MYCTU 1 359 +##PAF tr|Q6MWW7|Q6MWW7_MYCTU 1079 0 1079 - NC_000962.3 699930 333679 338719 1875 3747 0 AS:i:2328 ms:i:2476 np:i:688 da:i:354 do:i:240 cg:Z:15M1D6M10I28M5I9M1I32M8I21M4I6M1D15M1D7M7D26M1D43M4D9M513N20M2D7M10D7M6D28M17D13M2D34M4D22M1I13M6D16M4D11M4D16M5D20M2D10M723N12M4D31M2D11M5D74M3D16M1I24M2I27M3D30M3D11M1D15M4D25M5D24M4D12M9I16M1D2M180N5M2D18M4D9M6D10M4D10M2D11M8D11M4D43M3D9M1D9M6D7M3D19M1D7M3D28M1D14M1D14M7D12M2D38M cs:Z:*accP*aacQ:2*cccD:1*accN*gggA*gccG:6-tgg*ttaV*atcG:4+NGADNTTTAA:2*ggaT*tccT:1*gcgG:2*gtcG*aacA:5*aacT:2*gccT:2*ctcA*atcA:1*aacT:1*ggcT*gccG+GQQGN:2*gccN:2*aggN*gccG*agcG:1+G:1*accK:2*gccT:2*gccD:1*gggA*gccL:2*atgS*ctgS*ttcG:2*gccG:1*gtcK:2*cccN:2*ttcD:1*gccG*gctK*ttcA:1+TGSAPGTA*gccG:3*gccD:2*gccK:5*ctgI*ttcG:1*gacA:1*gggT*gtcT:1+PVGT:2*ggcS:1*gcaG:1-gac*gccG:1*accS:5*tccT:2*aacD:2*ctgA-ttc*ggcA*gccN:3*ggtA:1-cccggcggattcggcatcttt*ggcA:5*gatN:2*tctK:2*ctgD*ttcG:3*ggcV:1*ggcS*ggtS*agtT*ggcA:1*acgN:1-ata*atcG*aacG*gtcA:2*aacS:2*gccK:5*atgA*ctcG*agcG*ctcA:2*gccT*ggcP:2*ggcN:1*agcI*ggcA:1*tccN*aacG*ccgG:3*ggcD:2*ggtA:1*atcA*ggaV:1-gacggcggcacg*ttgI*ttcS:1*tccA*ggcT:3*ggcD~gt513ac:4*gcgG:3*gacA:2*gacN:2*tccT:5-atcctg:3*ggcD:1*accV:1-gggtccggcggcatcggaacgacgggccaa:7-ggagccgccttgctgatc:1*tccN:2*accN:1*ggcA*agcI:2*tttA:1*ctgG:1*accA:2*gccS:1*gggN*cgcS:2*gacN*gccG:1*ttgI*ttcG-ctcggtgccgcagggaccggcggccaggccgccctctcccaaaactttatc:1*gccK:2*accN:5*accA*ggtA:1-ctgttc*gccS:3*gccT*ggcV:2*ggcN:1*tttT:1*gcgG*aatD:2*accN:2*aacA*ggaA*ttgG*ctcA*ttcA*ggcT:2*ggcS*accN:5-ctcggcgccgac:1*ggcS:3*cacN:2*ctgT*ttcG:1*gccR:2*actS:5*agcD*agcG+I:2*accV*ttcG:2*aacK:2*agcN:1*ggcA*aacD-gccggcctactcgccctc:1*gccE*tccV:5*agcA:3*gccG*ttaP:1*gtcT-ggcgggaccggc*gggS*gtcP:5*agtQ:2*tcgQ-ctcttcggcttc:2*gccS:2*accA:2*tccA*agcA:1*atcA:1*agcG*agcA:1-ggcaccggcggtgac:2*acgA*gccN:1*gtgT*ttcA:4*gacQ:5*tttT:1*gctG-gacacc*ggtA:1*aatA*tcgA:2*gtcA*cccT:1*gccG~gt723ac:1*gccS*cccG:1*accA:1*gccG*aatT:4-ggctggttaatc:1*aacS:5*tccT:1*gcgG:2*gtcG*aacT:3*ggcA:1*aacD:2*gccQ:2*aacQ:5-ctcatc:1*aacA:2*gccQ:5*gtcA-gccagcagtgggatc:2*tccT:2*gccN:3*gccI*atgT*ctgG*ttcG*ggcT:2*ggcT:2*ggcA:2*ggcN:1*gtaG*gtaA:1*ctcG*acgK:5*gccQ:2*gctT:2*aacG*gccT:1*ctgG*ctcQ*ttcG:2*gccG:1*gtcD:5*ttcT*acgG*aacG*ggcD*agtR*gcaT*ctcV:2*gcgG*ggcT*ggcV*gccP*ggcA:1*gccS:2-ctgttcgcc*accQ:2*gtcN*ggcA:1*tccG:4*agcG*tccQ:3+D:2*gccS:2*gctD:2*ctgD*ttcA:1*gccT:2*accN:2*catN:2*ttcN*gccR*gacN:1+GN*agcG*ttcT:2*gtcA:2*gccN:2*gccG:1*gggA*ctgN*ttcG:4*gaaA:5*cacG*agcT-ctggtcgcc:2*gacN:5*aatD:2*atgD*ctcA*gccG*ctcN:1*gccG*gcgN:1*ggcN*gccG*ggcT:1*atcN:2*gacN:2*actN-ctcacggcc:3*ggcA:1*gccM:2*gccN:2-aac:2*ctgT*ctcG*ttcS:1*tccN:2*tccN:2*gccS:2-ttcggcttcgcc*gacN:2*caaN*ggcA:1*cccM:3*gccS:2*gtcG*ttcS:1*tccD:8-gttggccagggcttc:1*ggcA:1*atcT:2*gctT:2*accD*cccG:2*atcT:1*aacT:2*aacT:2*aacS:2-gccagcgcggtg:3*aacD:2*atcN:2*accN:1*gtgA+DNTANMTAQ*ttgA*atcG:1*aatD:5*agcD:2*attF:1*gcgG:1-aag:2~gt180ac*ggcA:1*gccG:2-tggctg*ttcL*ggcT*aacA:5*ccgG:1*accQ:1*gctG:3*gccD:1-gggtggttgttc:3*ggtA*aacI:4-gcgaccaacaccgccgcc*acgP*gctL:1*ggcD*gggD*gccP:2*gccN:1-gggatcttgttc:10-atagcc:2*gctG*ggaA:3*gggS*gccL:2-gccggtggggtctccttgctgatc:1*tccT:2*accD:6-tccataggcgtc*gctG:1*atcT:2*gccE:2*cgcE*ggcV:1*gacG:2*ttgG*ctcT*ttcG:4*accN:2*cacD:1*gccG*gctT:2*gtcT*ccgG*gccG:1*gtcD:5*aacT:2-ctgttcgcc*aacT:2*gccT:2*gccL:1*gggD-ttc*aacP*gcaR*gccV:2*aacS:2*aacD-ggcggactgttcggaact:5*gccS:1-acgaacttc:2*ggtA:7*ctgN*ttcA:4*accN:1*ggcN-gcc*gccG:1*tcgT:2*tccA:1-atcaccacc:1*ggcI:2*cacT:3*gccG:1*ctaD*ctcA*tccE*ctcP:1*gccV*tccP*ggtP:4*agcA:3*agcG*tccT-ctt*gccT:2*gccK:7*gccS*ttaG*ctcT-ttc:1*ttcS*cgcG:1*gccT:2*gccD:2*cacT:2*gcaG-gcacttaccagcatccagcaa:2*gccN:2*gccT:1*gggW:3*ttgK-ctcttc:1*tccD*gccT:1*gccS:2*gccG*ggcA:1*agcD:1*gccG*aacK:1*ctaP*ggcA*gccG:4*accA:5*cacA*gccG:1*gtgK*ttcG:1*aacS:2*gacV +NC_000962.3 miniprot mRNA 333680 338719 2476 - . ID=MP000068;Rank=1;Identity=0.5004;Positive=0.5508;Target=tr|Q6MWW7|Q6MWW7_MYCTU 1 1079 +NC_000962.3 miniprot CDS 338024 338719 458 - 0 Parent=MP000068;Rank=1;Identity=0.4731;Target=tr|Q6MWW7|Q6MWW7_MYCTU 1 245 +NC_000962.3 miniprot CDS 336674 337510 530 - 0 Parent=MP000068;Rank=1;Identity=0.4750;Acceptor=AC;Target=tr|Q6MWW7|Q6MWW7_MYCTU 246 463 +NC_000962.3 miniprot CDS 334856 335950 839 - 0 Parent=MP000068;Rank=1;Identity=0.5305;Acceptor=AC;Target=tr|Q6MWW7|Q6MWW7_MYCTU 464 805 +NC_000962.3 miniprot CDS 333680 334675 649 - 0 Parent=MP000068;Rank=1;Identity=0.5090;Acceptor=AC;Target=tr|Q6MWW7|Q6MWW7_MYCTU 806 1079 +##PAF sp|Q79FX6|MMAA2_MYCTU 287 0 287 - NC_000962.3 699930 560850 561711 624 861 0 AS:i:1076 ms:i:1076 np:i:234 da:i:0 do:i:0 cg:Z:287M cs:Z::1*tccV*gtgN*cagD:5*ggaE*aacD:25*tacH:3*gacE:4*cagE:14*aacG:1*gaaQ:20*gagA*aaaQ:11*gagK:3*ggtA:4*atgS:2*caaE:5*tccD:5*gagA:3*aaaQ:1*gacN:17*cagD:1*tacH*cacA*catD:2*gagA*gtgR*accA:1*cgcK*acgI:2*gccP:2*aagV*atgL:5*gtgT*cgcG*cccL:1*ttcR*aaaQ*gaaQ*ggcM*aggV*gaaD*aagH:2*acgP:2*cacL*gaaW:1*gttA*cacR:1*accL:3*ctgA*gccT:6*tggQ*ctgP:1*tccT:1*ccgE*acgM:1*cacE:1*tacQ*gccS*gagA:1*gtcT:2*cggT*gtcL:1*gcgR*gtcR:4*ctgP:7*atgL:2*acaE:2*gagQ*gccE*aacH:1*gatS*cagE:6*cagE*actE:2*gacE:14*cagV:2*accI:2*gacN:4*gaaA:1 +NC_000962.3 miniprot mRNA 560848 561711 1076 - . ID=MP000069;Rank=1;Identity=0.7247;Positive=0.8153;Target=sp|Q79FX6|MMAA2_MYCTU 1 287 +NC_000962.3 miniprot CDS 560851 561711 1076 - 0 Parent=MP000069;Rank=1;Identity=0.7247;Target=sp|Q79FX6|MMAA2_MYCTU 1 287 +NC_000962.3 miniprot stop_codon 560848 560850 0 - 0 Parent=MP000069;Rank=1 +##PAF tr|L7N670|L7N670_MYCTU 346 0 346 + NC_000962.3 699930 627247 628285 1038 1038 0 AS:i:1809 ms:i:1809 np:i:346 da:i:0 do:i:0 cg:Z:346M cs:Z::346 +NC_000962.3 miniprot mRNA 627248 628288 1809 + . ID=MP000070;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N670|L7N670_MYCTU 1 346 +NC_000962.3 miniprot CDS 627248 628285 1809 + 0 Parent=MP000070;Rank=1;Identity=1.0000;Target=tr|L7N670|L7N670_MYCTU 1 346 +NC_000962.3 miniprot stop_codon 628286 628288 0 + 0 Parent=MP000070;Rank=1 +##PAF tr|L7N677|L7N677_MYCTU 314 0 314 + NC_000962.3 699930 141199 142141 939 942 0 AS:i:1576 ms:i:1576 np:i:314 da:i:-1 do:i:0 cg:Z:314M cs:Z:*gtgM:313 +NC_000962.3 miniprot mRNA 141200 142144 1576 + . ID=MP000071;Rank=1;Identity=0.9968;Positive=1.0000;Target=tr|L7N677|L7N677_MYCTU 1 314 +NC_000962.3 miniprot CDS 141200 142141 1576 + 0 Parent=MP000071;Rank=1;Identity=0.9968;Target=tr|L7N677|L7N677_MYCTU 1 314 +NC_000962.3 miniprot stop_codon 142142 142144 0 + 0 Parent=MP000071;Rank=1 +##PAF tr|O07248|O07248_MYCTU 443 0 443 + NC_000962.3 699930 389259 390588 1326 1329 0 AS:i:2267 ms:i:2267 np:i:443 da:i:-1 do:i:0 cg:Z:443M cs:Z:*gtgM:442 +NC_000962.3 miniprot mRNA 389260 390591 2267 + . ID=MP000072;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O07248|O07248_MYCTU 1 443 +NC_000962.3 miniprot CDS 389260 390588 2267 + 0 Parent=MP000072;Rank=1;Identity=0.9977;Target=tr|O07248|O07248_MYCTU 1 443 +NC_000962.3 miniprot stop_codon 390589 390591 0 + 0 Parent=MP000072;Rank=1 +##PAF tr|O07255|O07255_MYCTU 388 0 388 + NC_000962.3 699930 396200 397364 1164 1164 0 AS:i:2002 ms:i:2002 np:i:388 da:i:0 do:i:0 cg:Z:388M cs:Z::388 +NC_000962.3 miniprot mRNA 396201 397367 2002 + . ID=MP000073;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07255|O07255_MYCTU 1 388 +NC_000962.3 miniprot CDS 396201 397364 2002 + 0 Parent=MP000073;Rank=1;Identity=1.0000;Target=tr|O07255|O07255_MYCTU 1 388 +NC_000962.3 miniprot stop_codon 397365 397367 0 + 0 Parent=MP000073;Rank=1 +##PAF tr|O53650|O53650_MYCTU 219 0 219 + NC_000962.3 699930 236549 237206 657 657 0 AS:i:1100 ms:i:1100 np:i:219 da:i:0 do:i:0 cg:Z:219M cs:Z::219 +NC_000962.3 miniprot mRNA 236550 237209 1100 + . ID=MP000074;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53650|O53650_MYCTU 1 219 +NC_000962.3 miniprot CDS 236550 237206 1100 + 0 Parent=MP000074;Rank=1;Identity=1.0000;Target=tr|O53650|O53650_MYCTU 1 219 +NC_000962.3 miniprot stop_codon 237207 237209 0 + 0 Parent=MP000074;Rank=1 +##PAF tr|P95220|P95220_MYCTU 300 0 300 - NC_000962.3 699930 314866 315766 900 900 0 AS:i:1583 ms:i:1583 np:i:300 da:i:0 do:i:0 cg:Z:300M cs:Z::300 +NC_000962.3 miniprot mRNA 314864 315766 1583 - . ID=MP000075;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95220|P95220_MYCTU 1 300 +NC_000962.3 miniprot CDS 314867 315766 1583 - 0 Parent=MP000075;Rank=1;Identity=1.0000;Target=tr|P95220|P95220_MYCTU 1 300 +NC_000962.3 miniprot stop_codon 314864 314866 0 - 0 Parent=MP000075;Rank=1 +##PAF tr|P96827|P96827_MYCTU 95 0 95 - NC_000962.3 699930 176667 176952 285 285 0 AS:i:482 ms:i:482 np:i:95 da:i:0 do:i:0 cg:Z:95M cs:Z::95 +NC_000962.3 miniprot mRNA 176665 176952 482 - . ID=MP000076;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96827|P96827_MYCTU 1 95 +NC_000962.3 miniprot CDS 176668 176952 482 - 0 Parent=MP000076;Rank=1;Identity=1.0000;Target=tr|P96827|P96827_MYCTU 1 95 +NC_000962.3 miniprot stop_codon 176665 176667 0 - 0 Parent=MP000076;Rank=1 +##PAF sp|P9WFM5|Y205_MYCTU 367 0 367 + NC_000962.3 699930 243383 244484 1101 1101 0 AS:i:1787 ms:i:1787 np:i:367 da:i:0 do:i:0 cg:Z:367M cs:Z::367 +NC_000962.3 miniprot mRNA 243384 244487 1787 + . ID=MP000077;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WFM5|Y205_MYCTU 1 367 +NC_000962.3 miniprot CDS 243384 244484 1787 + 0 Parent=MP000077;Rank=1;Identity=1.0000;Target=sp|P9WFM5|Y205_MYCTU 1 367 +NC_000962.3 miniprot stop_codon 244485 244487 0 + 0 Parent=MP000077;Rank=1 +##PAF sp|P9WI15|PPE24_MYCTU 1053 0 1053 - NC_000962.3 699930 367247 375711 1392 3272 0 AS:i:1632 ms:i:1832 np:i:589 da:i:0 do:i:1095 cg:Z:186M5I11M4I72M2623N160M6I5M1039U12M3D40M1I22M6I18M717U25M1D11M1D41M7D51M1I17M2F8M1D2M2I12M2I2M7I14M3I4M2I9M9D20M2D6M1D13M1D12M2I14M685U61M6I17M326N18M13I30M11D12M3I62M cs:Z::1*gatN:1*gtgS:1*tcgL*gcgP:2*gtcI:2*ttaA*cggL*atgI*tatF*ctcA:3*tcgP*gggE:2*ttgA:3*gcgT:6*gacM:3*gtgS:2*tcgA*tggS:8*gcgV*gatG*gcgG:2*cgcQ:1*cccA*gcgS*gcgS*gttS:3*cgcA:1*gtaA:3*ctgA*ggcA:2*attA*tcgA:1*acgA*gccV:4*gccT:4*cggA*gtaA*gccM*gtgI:1*acgE:3*gcgV*cggK*gcaT:1*acgV:1*catQ:1*gcgM*atcL:6*gtgD:5*agcM:3*ctgF:1*ttcQ:7*accI:2*gccT:2*cggQ:3*cagA:2*gccS:2*gttS*ggcA:7*gccI*gtcA:3*atgS:2*accS*cagK*cagP:1*aagQ*aagN:4*tcgP*gagA*cggW:1*accA:1*gccG:1+PAAAM*gcaT:4*cccI:1*agcA*gcgL:2+GPTA*ttcI:3*ttgI:4*gccG*aacG:4*ggaA:1*gtcN:1*gtgL*ttcA:1*gtcI:1*ttcN*ggcA:3*agcN:2*ctcF:1*tttS*gcaG:1*ctgF:1*agcN*gacS:1*ctgI:1*ttgS:1*aacS:2*ggcN*cacN:4*gcgG:1*accL:6*tttV:2*acgL:1*agcN*aacL:1~gt2623ac*atcT:6*agcL*aacG:1*gtcF:6*agcN:2*gtcI:7*ggaN:3*ttcI:1*agcG*ttcL:3*agcT:2*atcF:7*aacG:1*atcV:6*agcN:5*gcaG:3*agcN:4*atcG*ggaW:1*accS:1*aacH*accG:3*ctaF:2*tccA:1*gacS*gtcF:3*gccM*ttcL*aacD*ccgV:1*agcN*ttcA:4*ttcL:4*ttcY:1*accM:1*ggcD:4*aatS*accS:3*tacT*ctcF:1*attT:2*tacA:3*atcF*gccL:1*accA:1*gacN*gttI*gacN:2*gctV:1*atcN*accI:1*aacH*tacM*agcN:4*ttaN*agcT:2+MNNGVF:1*cagR:1*ctgV*gtcG*gQ~gc1036ag-cg*gaaG*acaS*tcgL*gctQ:2*actI*cggT*gcaT*acgP*gaaD*acgL-ttggcatcg*gcaT*acaL:1*gcaP*ccgL:1*actI*tcgP:1*ttgI*gaaS*acaV:2*gcaF*ccaS*acaL:2*tctI*tcaT*actL:1*gcgS*acgL*tcaN:2*gtaA*tcgA*gcaT:3*gctN*tcaI:1*ccgV*gcaG:1+F:1*atcL*cggP*gcgG*attL*ccaT*acaL:1*gggS*attL*tcaN*accI*cagP:4*cggP*gacA*tcgN*gaaI:1+VGAFSL:1*gcgG*atgL*ttgT*acaL:1*gcgS*cctL*tcaN*tctI:4*gcaT*acgP*ggtA*tctN*tI~gt714ag-ct:1*acaV*tcgG:1*ttgF*ccaS*acaL:1*gcaG*gcaL:1*ataL*tcgP*gctS:1*ccaN*acaI:4*ataT*tcgP:1*tcgN-ggc*tcaI*ccgT:1*ccgG:1*aaaF:1*ggaL*tcgP*gcgG:1-tga:1*cggL*gcaP*gcgS*gaaL*acaN*tcgI*gctP*tgtA*tcaA:1*cggT*gcgP*acgA*gaaN*acaI*tcgT*gctV*tctG*ttaA*actF*cggS*gcaL:2*actL*tcgT*gcaL*tcgP*gcaS*acaL*ccgN*gcaI:1*gaaA*actA*tcgT*gcaT*tcgP:1*actN-cgggcagcaccagcacgggct*tgtI*tcaT*actV*cggS*gcgG*acgF*gcaQ*acaL:1*gcgP*gctL:1*accI:1*gtaS*actV*tcaA*acaI:1*gcaP*attV*tcaT*ataV:1*gcaP*gctI*tcaT*acaV*ccgG:1*gctF*tcaN*acgL*cggP*gtaP*acaL*ccaQ*acaI:1*gccE*actV*tcaT*acaI:1*ggaQ*actL:1*acaI:2*tcgG+I*cgaT:1*cggG*gcgG*acgF:1*gcaL:2*cttI*tcaH*tctT*ccgQ*gcaP*actI:1*gcaV-ac:1*atcQ*ttgI*tggG*cggV:1*gacQ*tacF-cag:2+PS:2*tacW*tccD*tacV*gcgF:1*actS*attT:1*gagR:1+TV:2+FGIPFTL*cacQ*ttgF*gacQ*gtcT:1*atcV:1*atcA*gacL*ataQ:1*atcP*accG:1+GLS*agtT:2*gacN+GA:1*gtgI*gtgF*gacG*aatE:1*actD*atcL:1-atcatcggcttcgaatccttcgcgttt*agcQ*tttL*cacV*atcV:1*accP*gagY*ccgT*gacL*atcT:3*attV*gtcI*ccgG:2*gtgF:1-agcgtt:1*acgA:1*gcgN:1*gccP-gtg:1*ggaI*cccD*acgV*accP:3*atcV*agcD*gccG*accF*gccT-ggc:1*ggcP*cccQ:2*atcT:1*atcA:1*gacT*attT:1+EF:1*gcgI:1*ggcP:2*aacV*tcgG*accG*accF*agcT*ccgL*tcgP*tcaQ*gI~gc682ag-ct*tcaT:1*ccgQ*gccE*tcgI*ggaI:1*cggP*gcaE*gcaL*ccaT*acaI*cggN*gccS*tgtI*tcaG*accV*cggG*gcaG*acgF*tcaT*acaL:1*gcgQ*tcgI*gcaT:2*gcaP*gcaI*tcaT:2*gcaP*gcaL*tcaT*acaI*ccgD*gcaP*gctI*tcaN*acaL*ctgT*gcaG*gcaF*ccaT*ataL:1*gcaQ*gctI*tcaT:1*tcgP*gcgP:4*gcaP*gctL*tcaT+IDPINL:1*ccgG*gtgF:1*acaL*acaP*cggQ*gctI:1*tcaT*acgP*cggP*gtgI:2*acaP*cggP~gt326ag*caaL:2*agcE*atgP*gttI:1*accV:3*ggcT*ccgT*atcP:1*atcL*ggcT*atcV+PGIHLPSTTIGAF*agcA:1*ggtP:1*accG:2*ttcY*ggcF:2*accS:1*ggcA:6*cacN*accS:3*catG*gtaN:3-gggaacttcggcgccggcaacatgtcgggctcc:2*ttcN:1*gctS:1*aatL:2*ttcW:2+TNP:2*ggcL:2*aatG:2*ctaY*ctgQ:3*gcgG:1*cagS:2*ctgF*gcgS:3*aacS*accG*atcV:2*gtcF*tacA:1*acgR*agcG*acgI:1*gacP*ctcF*gcgS*acgV*cccA*gccS*ttcV*ggcV:2*atcF:4*gccT:4*ctgF:1*ctcQ*gacG*aacT:1*ggcS +NC_000962.3 miniprot mRNA 367248 375711 1832 - . ID=MP000078;Rank=1;Identity=0.4254;Positive=0.5400;Frameshift=1;Target=sp|P9WI15|PPE24_MYCTU 1 1053 +NC_000962.3 miniprot CDS 374905 375711 782 - 0 Parent=MP000078;Rank=1;Identity=0.5935;Target=sp|P9WI15|PPE24_MYCTU 1 278 +NC_000962.3 miniprot CDS 371786 372281 573 - 0 Parent=MP000078;Rank=1;Identity=0.6163;Acceptor=AC;Donor=GC;Target=sp|P9WI15|PPE24_MYCTU 279 449 +NC_000962.3 miniprot CDS 370462 370749 87 - 2 Parent=MP000078;Rank=1;Identity=0.2913;Target=sp|P9WI15|PPE24_MYCTU 450 549 +NC_000962.3 miniprot CDS 368891 369747 88 - 2 Parent=MP000078;Rank=1;Identity=0.2626;Donor=GC;Frameshift=1;Target=sp|P9WI15|PPE24_MYCTU 550 830 +NC_000962.3 miniprot CDS 367973 368208 43 - 2 Parent=MP000078;Rank=1;Identity=0.2143;Target=sp|P9WI15|PPE24_MYCTU 831 915 +NC_000962.3 miniprot CDS 367248 367646 259 - 0 Parent=MP000078;Rank=1;Identity=0.4362;Target=sp|P9WI15|PPE24_MYCTU 916 1053 +##PAF sp|P9WI41|PPE10_MYCTU 487 0 487 - NC_000962.3 699930 530753 532214 1458 1461 0 AS:i:2496 ms:i:2496 np:i:487 da:i:-1 do:i:0 cg:Z:487M cs:Z:*gtgM:486 +NC_000962.3 miniprot mRNA 530751 532214 2496 - . ID=MP000079;Rank=1;Identity=0.9979;Positive=1.0000;Target=sp|P9WI41|PPE10_MYCTU 1 487 +NC_000962.3 miniprot CDS 530754 532214 2496 - 0 Parent=MP000079;Rank=1;Identity=0.9979;Target=sp|P9WI41|PPE10_MYCTU 1 487 +NC_000962.3 miniprot stop_codon 530751 530753 0 - 0 Parent=MP000079;Rank=1 +##PAF sp|P9WJT5|MMPS1_MYCTU 142 0 142 - NC_000962.3 699930 483230 483656 426 426 0 AS:i:733 ms:i:733 np:i:142 da:i:0 do:i:0 cg:Z:142M cs:Z::142 +NC_000962.3 miniprot mRNA 483228 483656 733 - . ID=MP000080;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJT5|MMPS1_MYCTU 1 142 +NC_000962.3 miniprot CDS 483231 483656 733 - 0 Parent=MP000080;Rank=1;Identity=1.0000;Target=sp|P9WJT5|MMPS1_MYCTU 1 142 +NC_000962.3 miniprot stop_codon 483228 483230 0 - 0 Parent=MP000080;Rank=1 +##PAF sp|P9WK11|MEND_MYCTU 554 0 554 + NC_000962.3 699930 646297 647959 1659 1662 0 AS:i:2837 ms:i:2837 np:i:554 da:i:-1 do:i:0 cg:Z:554M cs:Z:*gtgM:553 +NC_000962.3 miniprot mRNA 646298 647962 2837 + . ID=MP000081;Rank=1;Identity=0.9982;Positive=1.0000;Target=sp|P9WK11|MEND_MYCTU 1 554 +NC_000962.3 miniprot CDS 646298 647959 2837 + 0 Parent=MP000081;Rank=1;Identity=0.9982;Target=sp|P9WK11|MEND_MYCTU 1 554 +NC_000962.3 miniprot stop_codon 647960 647962 0 + 0 Parent=MP000081;Rank=1 +##PAF sp|P9WKL3|Y559_MYCTU 112 0 112 - NC_000962.3 699930 650409 650745 336 336 0 AS:i:590 ms:i:590 np:i:112 da:i:0 do:i:0 cg:Z:112M cs:Z::112 +NC_000962.3 miniprot mRNA 650407 650745 590 - . ID=MP000082;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKL3|Y559_MYCTU 1 112 +NC_000962.3 miniprot CDS 650410 650745 590 - 0 Parent=MP000082;Rank=1;Identity=1.0000;Target=sp|P9WKL3|Y559_MYCTU 1 112 +NC_000962.3 miniprot stop_codon 650407 650409 0 - 0 Parent=MP000082;Rank=1 +##PAF sp|P9WLD5|Y2302_MYCTU 80 0 80 + NC_000962.3 699930 661002 661242 141 240 0 AS:i:228 ms:i:228 np:i:55 da:i:0 do:i:24 cg:Z:80M cs:Z::1*aagH:5*tggY:2*atcV:2*gcgT:1*ataT*gatE*caaR*ccgH:1*cacQ*cgaH*gggA*ttgE:6*tccA:11*gagV*accN*gacG:1*gtgE*gcgT:2*attY:2*ccgS:7*gagT:1*cagH*aatA*gcgE:1*gacE*gagK:2*cagA*catA:1*ttcA:1*gcgH*gttA*cagA*tcgT +NC_000962.3 miniprot mRNA 661003 661242 228 + . ID=MP000083;Rank=1;Identity=0.5875;Positive=0.6875;Target=sp|P9WLD5|Y2302_MYCTU 1 80 +NC_000962.3 miniprot CDS 661003 661242 228 + 0 Parent=MP000083;Rank=1;Identity=0.5875;Target=sp|P9WLD5|Y2302_MYCTU 1 80 +##PAF sp|P9WMY5|MGTA_MYCTU 378 0 378 + NC_000962.3 699930 648535 649669 1131 1134 0 AS:i:1958 ms:i:1958 np:i:378 da:i:-1 do:i:0 cg:Z:378M cs:Z:*gtgM:377 +NC_000962.3 miniprot mRNA 648536 649672 1958 + . ID=MP000084;Rank=1;Identity=0.9974;Positive=1.0000;Target=sp|P9WMY5|MGTA_MYCTU 1 378 +NC_000962.3 miniprot CDS 648536 649669 1958 + 0 Parent=MP000084;Rank=1;Identity=0.9974;Target=sp|P9WMY5|MGTA_MYCTU 1 378 +NC_000962.3 miniprot stop_codon 649670 649672 0 + 0 Parent=MP000084;Rank=1 +##PAF sp|P9WNF7|MYMA_MYCTU 495 5 487 - NC_000962.3 699930 656012 657440 645 1449 0 AS:i:1085 ms:i:1085 np:i:295 da:i:30 do:i:0 cg:Z:113M2I77M4I82M1D141M1I62M cs:Z::2*gtcL:1*gtcI:3*atcL:2*ctgI:1*gcgT:1*tacC*cggH*atcV*atcT*gaaA*cgcE*aacF:1*cagD*ctgK:1*tacI*accA*atcL:4*gcgE:1*atcL:16*agcD*atcM:2*ctgF*tcgG*tttY*cccK*tacF*gagR:2*accR*cgcD*gaaV*gaaK*ggcV*atcL:4*cacS:2*gagQ:1*ctcI*accA:1*atgT:1*cacT*aagE*tacF:1*atcV:1*cgcE*cacK:1*gagH*ttcY*aacG*agcL*tacK:1*cgcN*gcaT:1*gacE:1*gacS:1*tccR*accQ*gatC*accR:3+AG*accV*ttcH:1*cagA*aacT:1*gtgE*cacT*aagR*cacT:1*cgcT*agcC*cggD*ttcY*gtgL*ttcI*ttcS*ggcC*agcT:6*gagA:2*accL:3*ggaP:1*atcV*gagH*aagR:3*gcgR*gtaC:12*accS:3*atcV:12*atcV:1*tcgA*ctgM*accA+GSNP*gacG*cggS:1*gaaA*aagH:8*accS:1*ctgI*atcF:1*gcaL*tccP*aaaA*tacV*agcD*acgK*ttcI*gccS*gccE:1*gttL*cgtG*aaaR*gcgF:2*cccD*aaaR*actW*tctV*cacY*ttgE*attF*gtcG:1*atgR*tacR:1*gcgI*ttaA*ttgI*gaaQ*gcgR*gtgK*ttcL*tggY*ttcQ*ttgA*tccC:1*aagR*acaW:1*gtgK*ttcL*gtgM*aaaR*tggR:2*cgcL*cgtW*accE*gcgV*atcR*aaaR*aatR:1*cccG*gagR*ggcS*tacV:1*atcM-gaa*accS*cacN:3*cggN:1*aacL:3*cagE:3*ctgA*atcV:1*gacN*gccG:2*tacF*aacK*gccT*atcL*accA:2*cgcA:1*gagS:4*catQ:1*gacE*cacT:1*gacT*gccE*accK:2*gcaL*ctcC:3*gggR*cacE*ctcI*gatE:10*cagN*ttgI:1*gcgM:3*gccM*gcgR*atcL*agcI*ctcV:2*gtcA:1*atcY*gacQ*cctL*cggP*gatE*cgcK*tttM*gtcT:2*gcgG*cacV*atgL:2*gacN*gtgA:3*ttcA:1*tgtI*gtgI:9*cgcK*gccS:1*atgI*acgA*gccG*cggA*gcgY*acgL*gcaC*aaaR:2*gcaR:3*gccD*catN:1*cacY:1*cgcV:1*gccT:1*cacR+D*ctgA*ggcQ:1*gagC*ccgA*atgL:1*gagV*aaaG*ccgM*tccF*tggD*gacQ*attL*cagN*gccS:5*gcgG*ccgQ*tacD*gcgI*ctgM:1*aagR*tccQ:1*accS:1*cggH:2*aatR:1*cgaL*cagM*aacH:1*ttgE*gccK:2*atcK*gacI*tacL*cgaL*ttcE:1*cgcP:1*gagD*gagD*gcaG*atgV*gtgL*ttcH*ggcF:2 +NC_000962.3 miniprot mRNA 656013 657440 1085 - . ID=MP000085;Rank=1;Identity=0.4451;Positive=0.6108;Target=sp|P9WNF7|MYMA_MYCTU 6 487 +NC_000962.3 miniprot CDS 656013 657440 1085 - 0 Parent=MP000085;Rank=1;Identity=0.4451;Target=sp|P9WNF7|MYMA_MYCTU 6 487 +##PAF sp|P9WP95|COBQ_MYCTU 494 0 494 - NC_000962.3 699930 306376 307858 1482 1482 0 AS:i:2552 ms:i:2552 np:i:494 da:i:0 do:i:0 cg:Z:494M cs:Z::494 +NC_000962.3 miniprot mRNA 306374 307858 2552 - . ID=MP000086;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WP95|COBQ_MYCTU 1 494 +NC_000962.3 miniprot CDS 306377 307858 2552 - 0 Parent=MP000086;Rank=1;Identity=1.0000;Target=sp|P9WP95|COBQ_MYCTU 1 494 +NC_000962.3 miniprot stop_codon 306374 306376 0 - 0 Parent=MP000086;Rank=1 +##PAF sp|P9WQE1|PPSE_MYCTU 1488 7 1277 + NC_000962.3 699930 486054 519911 1230 3944 0 AS:i:1194 ms:i:1303 np:i:611 da:i:324 do:i:408 cg:Z:15M1D27M9I58M1D13M2I4M3I9M1I5M4I58M1D11M1I58M1I59M1I67M2D26M1D16M4D44M8I3M2I14M2D149M1D103M1I43M1I19M3I32M1D24M4D24M1I21M6D25M1D32M2I32M2F2M9423V3M4D18M6I7M2I18M2I8M4D11M3649V40M6D22M5D15M13510N20M3490U62M cs:Z:*gttI:2*atcV:1*gtgM*ggcA*tgtG:4*gatA*attK:1-ggc*ccgV*gaaS*cggA*ctaF:1*gacS*tttN:1*accR*gagR*aagG:1*tgtE*gcgS:1*acaV*gcgT*tatL*ccaS*gatE*cgtQ*gggE*ttcL*acgR*aatD:2+VSDKTLADP*actA*ttcY*gcgV*gagR*tccR*ggaA*ggcP*tttL:1*aagD*gatG*gtcI*gcgD*ggtE:2*aatA*agaG:2*gatG*atcF:2*gacL*gagA:1*ctgQ*cgaV*atgL:3*caaH:2*ttaF:1*gagQ*gtcC*tctA:1*gaaH:3*catD:2*attA*attD:1*gagA*tcaR*ttaF*agaD*cttG:1-cgt*acgI:2*ttcY*gttG*gggT*gtgS:1*tcaP*actS*gacG:1*gtcL+LH*cggN:1*gtgL:1+HRD*gctP*agcN:1*cagV*caaL*aagA*tctE*actG*attL+N*tggF:1*aacQ*accF*ggcS+LFLQ*ggtN*tctD*tcgK*agtD*attF*attL:1*aatT:3*tacH*tttA*ctcF*gatN*attL*cagR:4*gtcA*attV*gacQ:14*cgaL:2*agtL*accS*tggG*gacE:2*atcM:2*gtcA:2*acgS*aatS*gttL*cttC:1-tca:1*gaaH*ccaR*tggV:1*gggY:1*aggT*gaaS*gcgP:1+S*atcM*ttgV:1*cagA*acaV:1*tgcH:1*cacR*gcgP:2*aaaV*tccR:3*atgT:1*cgcF:1*gagS:1*tgcV:1*gttL*atcV:2*cagK*cgcP:1*agtA*gatA:1*cgcI*cttD*gagA:1*cggD:2*ttaH:1*attV*ctgI*acgR:3*gtcI:1*cagN:2*aagS*tccA*aacK+M:1*attY*atgA:4*agtA:2*attA*ggtD:1*cttI*gaaA*aatE:1*tgcH*aagA*agcV*gctS*cgcG*gtcI:1*ccgS*ctgS*gaaT*atcV*ggcS:3*gccC:5*tcgP:3*aggP:2*gcgI*cacQ*gccG:1*ggcR*atgA*gtcA:1*ggtE*cgcV*aagS*agaQ*ccgT*ggaS+R:1*gggA:1*ctgC*atgV*atcL:2*atcV:1*ccgS:6*ggtV:9*gcgT*gtgI:1*atgC*gttL*gagK*cgtN*ggcK*tcgA:1*cttP*ccgA*agcT*gggL*gggH*tttY:1*gagS:3*gctE*atcL*ccaR*ttcL*acgD*gaaQ*ttgS*ggcP*ctgF*agaV:1*gtaQ*gacS*gaaK*cttY*cagG*gagP:1*ccgE-gtggtg*gcgC*ggtD*cggG*ccgV:9*tttV:7*attV*gtcL:3-ggt*tcgP*gttA*gggE:1*gacS*acgE:2*ggcA*cgcH:1*gatE*gttP*ggcA:1*tccP-ggtggtggggtg*gtgQ*gcgV*tggI*gtgL*attL:1*gggA*aagQ:2*tcgA:2*gctG*gctE*cagS*gcgR*ggtT*cggA:1*gggA*cggA*tatA*gtgL*cggE*gctT*cggQ*ccgD*gcgG*cttP*gatR*gttL*gttS:2*gggA:1*tcgT:1*gtgA*agcR*acgR:1*tcgK+HNVTMAAV:1*tttH:1+RE:1*cggA:1*gtgT:1*gtcL*ggcR*cagA*actA*cgcE*gatH*gagD*ttgN*ctgV-gctggg*ttgF*gctV:1*gtgE*gttA:1*ggtH*cggD*ccgG:1*gctH:1*gtgD*gtcR*tgcA*ggtD*gttA*ggcA*aagP*ccgT*gcgS*ggcD*aagR*acgV*gctV:1*gtgL:1*gccP:3*tcgA:1*tggH*ctgV:2*ggtA*agcK*gagG:2*gctD*gccT*tacE:4*gagQ*gccH*ctcF:1*gctT*gtgC*gtgA*gacA*gagG*ttgF*gacR*cggD*cacE*ctgT*cggG*tatI*ccgD:1*cgcH*gatA*gtgE*atcV*tggF*gggD*cacG*gacT*caaA*gatT*ctgD:1*aatE*accR*accI*gaaD*ttcR*gccS:5*gcgT:2*gtgY:2*tatA*cggK:1*ctcV*atgD*tcgT*tggF:3*ccgA:1*ttgA*gtgY*ctgI:1*catY:1*gtgT:2*ttgY*gccI:2*cacT*gtcL:2*gcgV*ctgF*tgtD:1*ccgQ*gatT:1*gcgI*atgK*ctgT:1*gccS*gcgL:1*ggaA:3*cagH*gcgE*ttgS:1*gccP-ggc:3*tttV:2*cagA*gccL*cgtG*gaaP:1*gagD:1*gcgT*ccgQ*atgY:1*gggP*cacP*gatE:1*agcE*atcL*gcgS:3*ggtD:1*gctG*tcgN*gtgC:1*atcV*tctA:1*gccP*cacK:1*gcgQ*gtgI*agcR:1*atcL*gctR*gatQ:2*cgcT*ggcE*cagA:1*cgtI*cggP:1*cacR:1*ttgV*gcgR*gtcA*tcgT:4*tcgT*gcgS*ttgA:1*gagD:2*atcL*gctG*gagQ:1*acaQ*gccE*gttF*gcgL*gccS*gaaR*ctgQ*tctQ*gtgL*ggcR*ttgP:1*acgR*atcT:1*gtcL*attL:2*gtgL:2*cagS*ttgW*gtgM*gccS:1+Q*gacQ*ttcV*gccV*tcaD*gctP*gatA*tacS:1*gccT:1*catQ:1*cggS*gcgS*gtgP*gtgI:2*ggcA:1*agtE*gttL*cgtD*agtV*gccV*cacL*tgcA:1*ggtP*gccS*agtR*cgtI*ttcL*atcV:6*ggcS:2+G:1*ttgA*atcM*gagR*gcaH*tcgP*ctgK*gccW*gacS*gcgT*cagT*atcH*gtgR*tcgT:1*cccR*acgL*ctgM:1+HPL*aaaQ:1*cggV*cccD*gaaD*ccgR*gtcD*agtT*gtgF*atgL*acgR:1*gcgL*gccG*cagE*ggcL*ttcW*gtcS*tcgA:1*atgV*ggcE*ctgV:2*gccT*tcgP*gtgR*tttR*tccP*gggA*tacV-cgg:1*aagH*cggL:1*gagS:2*acgG:1*gccP:1*cagA*catR:1*aagR*ttcH:1*ctcV*gcaE:1*gccN*ccaH*tcgT:1-agcgaccccacc*gccW:1*ggcQ*cagA*atcP:2*agcN*gatN:1*ggtS*gctP*gaaA*ctcG*ttgT:1*tccD*tccG*gggS*tttT:2*cggT*ctgV+D:1*ggtA:1*tcgN*gccG*gacE*gagS:1*ctcT*gccE*gcaV*gcgT*atcL*gagQ*gtgR*gtaI*tgtW*gagS*catQ*gccC*gcaL-gcggtgctggggcgcgac:1*gctV*gccS*ggaS*ctcV:1*gctR*ggcN*cagA*gcgN:1*gccF:1*tcgL:1*tttG*aatD:2*agtM:1*gtgI*gagS*ctaI*cgtA-aac*cgcM*ttaA*acaA:1*gtcN*accE*gcaG*gtaL:1*ctgI*ccgT*gccP*accQ*gcgD*atcL*ttcY*gatE*cacY:2*ccgL*accA*gaaS:1*gccT*cagA*tatA*ctgV*atcD*accA*caaS*ataF+AS*gacS:1*cacL*ggcA*agcK*tccP*gccP*gccE:1*gcgQ:4*gagV*cgaP*atcP*gatN*gcgV*ctcT*accY*gatF:1*tttD*ctaR*caaG*gctL*tgcR:1*gcgT:2-ga:2*tgV~gt9420ag-c:1*ataL*gttI-gccgacggagat*gtcL*ggaR*attL:2*gtcK*gttI:3*ccaD*gcgI*cacR*caaA*cagV:1*gtcT*ggcA+VVNHHD:2*cagR*atcL*gggH*tttL:1+GN:2*gtgI*gcgW*gcgE*ggcQ:1*gtaI*gtcA*gttA*gagP*ctgA*gcgE*ttgF*catT:1*gtcL*gatS+NR*gcgS*ctgV*ataP*gaaN:1*ctgV*cttA:1-gacctcttcgtc*gccG*gcgS:1*gatE*cagE:1*cagA*tgtA*ctcV*gtcL:1*ccI~gt3646ag-c*ttcL:1*tcgE*cggL:1*atcE*atgD*ggtQ:1*gggD*ggtP*gcgN*accA*aatP:2*gtgA*ctaV*gagH*cagI:1*ctgA*atcA*gccH*tcaG:1*accP*gagH*ctgY*accL*accC*gtcL:2*cgcH*cggA*gtcM*gacV*gccT:1-gggggaaccggcctgctc:1*ctgS*ctcS*aacR*cggQ*ctcI*ggcL*atcA:1*ccgD*ctaI*cccV*aacT*accA*gcgF:1*tccQ:1*agcL:1*gcgG:1-gcggtcctgacagcg*cagE*ttgI*gccT*cgtL:1*gcgP*ctgV*aacS:1*aacG:1*gtcR*aagE*ctcW*gagS~gt13510ag:2*gtaC*atcA*ccaA*gtaL*ggtA*gtaT*aacH:1*gggA*tccA*cggL*ggtD*gaaT:1*ccgS:1*tacW:1*gE~gt3487ag-tt*ccgN*ggtS:1*acgK*ccgA*tcgT*attL:1*accL*ggaA*tcgD*cccA*gcgL:1*tcgN*ggaA*cttH*tcgT*ggtA:1*gacP*gagP*gagR*tcgA*cccD*ggtE*gcgL*cagT*agcK:1*accS:3*acgS*gcgV*cccE*gacQ*ggcT*acgS*aagE*gtaL*gcgD*accD*gcgG*aagR*ttcR*gagR:1*gccR*aacR*ggcS*tatI*gccQ:1*gtcI*acgL*atcL:1*acgA*accL:1 +NC_000962.3 miniprot mRNA 486055 519911 1303 + . ID=MP000087;Rank=1;Identity=0.3119;Positive=0.4648;Frameshift=1;Target=sp|P9WQE1|PPSE_MYCTU 8 1277 +NC_000962.3 miniprot CDS 486055 489112 1162 + 0 Parent=MP000087;Rank=1;Identity=0.3341;Frameshift=1;Target=sp|P9WQE1|PPSE_MYCTU 8 1040 +NC_000962.3 miniprot CDS 498533 498754 35 + 1 Parent=MP000087;Rank=1;Identity=0.2262;Target=sp|P9WQE1|PPSE_MYCTU 1041 1116 +NC_000962.3 miniprot CDS 502401 502665 23 + 1 Parent=MP000087;Rank=1;Identity=0.2159;Target=sp|P9WQE1|PPSE_MYCTU 1117 1194 +NC_000962.3 miniprot CDS 516176 516236 27 + 0 Parent=MP000087;Rank=1;Identity=0.2857;Target=sp|P9WQE1|PPSE_MYCTU 1195 1214 +NC_000962.3 miniprot CDS 519724 519911 56 + 2 Parent=MP000087;Rank=1;Identity=0.1935;Target=sp|P9WQE1|PPSE_MYCTU 1215 1277 +##PAF tr|Q79FE6|Q79FE6_MYCTU 361 0 361 - NC_000962.3 699930 333504 336310 675 1110 0 AS:i:948 ms:i:1040 np:i:253 da:i:0 do:i:0 cg:Z:97M7I46M1I5M459N53M1I7M3D62M1D32M5D1M1276V20M3I25M cs:Z::3*gtgL:2*gcgS:2*gttA*atcL:2*gcgT:2*gatY:1*gccT*agtG*ctcI:2*agcA:6*gccV:3*aacP:2*gcaE*ctgI*atgL:3*gccT:7*gccS:6*ggcA:8*caaH*gcgV*cagA:3*gccD:3*cagH*gcaT:2*tccA:1*ggcA:1*gccS:1*gcgM:6*gtgA:2+LQALQLE:2*gatN*ccgA:2*gagA*ttcP*ttcT:2*aatL*accL:6*aacD:1*gccT*aacD*ggcA:3*accS:1*gccG*aatA:2*gacA:2*tggI:6*gccT:2+A:1*ggcD*gcgL:2~gt459ac*agcT*agcG*ttcR:14*gcaI:2*gaaA:2*agcG*ggcC:1*cacS*agcA*ctgV*gtcA*gccI:8*aatA*gccG:1*atgV*ctcF*gccS*ctcG:1*gccG:5+D*ggaA:3*gacS:2-actctcacg:3*ataT:2*gccL*ggcL:1*gccG:2*aacG:2*ctgG*ctcA*ttcG:1*tccA:2*tccN:2*gccG*ggcA*ggaS*ttcN*ggcS*ttcA*gccS*gacI:2*caaD:2*cccS:2*aacA*gccG:1*acgM*gtcL*ttcY:1*tccA:2*gccV:5*gttA*ggcA*cagV*ggcA*ttcI-gcc:2*atcD:5*accR*cccA:1*ctgA:5*aacD:5*gccT:1*gcgN*gtgT*accP:2*aacS:1-gggatcggcggcacc:1*gtD~gt1273ag-c:2*gtcN:4*gtgG:11*ggcE+IVI*aaaS*gccG:1*gccS*acgV*cccA:1*gccT:2*accN:6*gagF:2*ctcT:4 +NC_000962.3 miniprot mRNA 333502 336310 1040 - . ID=MP000088;Rank=1;Identity=0.6081;Positive=0.6838;Target=tr|Q79FE6|Q79FE6_MYCTU 1 361 +NC_000962.3 miniprot CDS 335867 336310 452 - 0 Parent=MP000088;Rank=1;Identity=0.6410;Target=tr|Q79FE6|Q79FE6_MYCTU 1 156 +NC_000962.3 miniprot CDS 334914 335407 431 - 0 Parent=MP000088;Rank=1;Identity=0.5542;Acceptor=AC;Target=tr|Q79FE6|Q79FE6_MYCTU 157 312 +NC_000962.3 miniprot CDS 333505 333640 157 - 1 Parent=MP000088;Rank=1;Identity=0.6875;Target=tr|Q79FE6|Q79FE6_MYCTU 313 361 +NC_000962.3 miniprot stop_codon 333502 333504 0 - 0 Parent=MP000088;Rank=1 +##PAF sp|L7N697|PE16_MYCTU 528 0 528 - NC_000962.3 699930 177545 336310 717 1701 0 AS:i:897 ms:i:942 np:i:307 da:i:0 do:i:0 cg:Z:94M157121V15M8D108M1I112M1I15M2D21M2D5M4D11M18D59M13I32M3I32M5D5M cs:Z::4*attF:1*gcgV:2*gttM*atcV:2*gcgT:1*acgS:6*tcgA*agcA*atcL:1*gcgE:1*aacT:4*gccI*aacP:2*gcaQ*ctgV*atgL:2*ggcA:5*acaA:3*gcgE:7*gccE*tatF:7*cagS:3*gccD*cagR:2*cagR:2*accS*tccA*ggtA*ggcA:1*gccW:1*gcgV*gccD:4*gcgN*gtA~gt157118ag-c:3*cagD*gagT:1*acgA*gccT:1*ctcA*tttS*aagE*ccaL*accG:1-cccccggtgctaccgccaatgttc*aacG*caaG*aatR:2*atcL:1*atgL:1*ggcS:2*tcaT:1*ataR:1*acgP*ccgF*agtD:1*gtcM*aacQ*gccQ*atcV*acgY*accD*ttgR*ttcY:1*gacA:1*gtcH*gtcY*tcgL*aatG*ccgY*gtcA*gtcF*aaaS*gcgG:1*gtgY:2*gaaA*gagQ*ctaF*tatQ:1*atcW:2*gtcI*aaaP:2*cccT*ttcY*caaD*accQ:2*cagA*ttgE:1*ctaA*cagG*attY:1*gacH*ggcT:2*tggM*gagQ:1*atcV*aacA:3*cacD:1*accV:1*ttcL:1*tatF:2*agcG:1*gtcS*atcV:1*tccT:3*cagR:2*atcA:2*ggtP*cccA*aacG+V:4*agcD:2*aatS:1*atcV:1*atcL:2*gagP*atgN:9*ataF:3*aatY*gtcL*accQ*accS:3*ccgT:1*tacN:5*aatT*cccD:1*ccgA:2*accI:2*ctcT*gagQ:8*cggK:4*gtcI:1*tccA:1*atcV:2*gtaL*ttcL:2*ctcY*acgY*gtgS:1*accS*acgL:1*gcgY*gacG:3*gcaE:1*ataV:2*gccG*acgI*cagV:2*acaV*cagS*ggcS*acgP*acgD*tcgT:2*tacT:2+L*attL*gaaP*accN:1*catD:4*gccQ:3*gcaG:1-ccggtc*attV*ggcP*ccaE:2*gcgL*gcgD:1*gtcI:2*aacD:1*gaaR*gtaA:1*gtcI*aatE:3-ggcgac*ccgD:1*ttcT:2-tcgacgagcccg:1*aacD:4*ttcA*gggA:3-gatgtcccggcgagcgttgtcgccgatgccctggttgccggaacgcaacagggc:1*aacH*gacI*ttcD*atgP*gtcI*gagA*ttgV:1*gccP*gccQ*ctgI*aacG*accA*ctgA*cccI*caaG*actG:1*atgL*cccT:1*ttcL*ccgD*ccgG*tatL*gtgL*ccgD:1*ctgV*ctaI*ccgN*ccgD*ccaQ*ccgL*ccgN:1*caaV*ccgV*gcgT*acgS*ctcG:1*aacY*atcQ:1*gacG*actA*ttcE*gctL:2*gtgA*tcgA*accA:2*tcgG*attA+PAGVTNAIFIGQQ*cttV:2*acgI*gcaL*gatV*ctaE:1*cttP*gccG*ttcA*gtcL*actV*atcT*ctgA*cccD*gccT*tatH*gacY:1*accV*ctgD*ttcA*gtgI*aatQ*caaD:4*aacD:1+SGF*cgcN*gctQ*gcgN*atcL*gagQ:1*ccgI*ctcP:1*gccT*accN:1*gggA:1*gccL*gccV*ctgF*ggcA*ggcA*atgG:1*gaaP*ttcA*atcV:1*attA:1*gtgA*acgI:1*gccT*gacG-attactcagcaactg:1*agcD:1*agcP*atcV +NC_000962.3 miniprot mRNA 177543 336310 942 - . ID=MP000089;Rank=1;Identity=0.4215;Positive=0.5414;Target=sp|L7N697|PE16_MYCTU 1 528 +NC_000962.3 miniprot CDS 336027 336310 290 - 0 Parent=MP000089;Rank=1;Identity=0.6421;Target=sp|L7N697|PE16_MYCTU 1 94 +NC_000962.3 miniprot CDS 177546 178908 652 - 1 Parent=MP000089;Rank=1;Identity=0.3771;Target=sp|L7N697|PE16_MYCTU 95 528 +NC_000962.3 miniprot stop_codon 177543 177545 0 - 0 Parent=MP000089;Rank=1 +##PAF tr|O06536|O06536_MYCTU 113 0 113 + NC_000962.3 699930 265572 265896 150 339 0 AS:i:201 ms:i:201 np:i:66 da:i:66 do:i:396 cg:Z:45M1I23M4I40M cs:Z:*ttgM*atcV:6*aaaE:1*aagR:4*gccG:3*cggI*ggcV*ttgV*gccG:2*atgL*gatE*cagE*cttA*gacH*ggcD*gatN*gccP*ggcD*ctgV*tcgR*gtgA*gcaV*atcV*ctgI:2*gggA:1*ggtD+K:1*ttcL:3*atgA:4*ttcI:2*ggcR:2*gtcP*gtcY*gtcH*gaaP*ggtH*cgcH:1+EWGI*cttA:1*tttY*accR*gaaH*cgtH*ccgF*ccgI*accD:2*ctcT*attS:3*gaaS:1*tacT:2*gcgD*ggtD:1*accA:1*ctgP:3*gccS:2*atcV:2*gccD*aggE*gatH*tcgT +NC_000962.3 miniprot mRNA 265573 265896 201 + . ID=MP000090;Rank=1;Identity=0.4425;Positive=0.5841;Target=tr|O06536|O06536_MYCTU 1 113 +NC_000962.3 miniprot CDS 265573 265896 201 + 0 Parent=MP000090;Rank=1;Identity=0.4425;Target=tr|O06536|O06536_MYCTU 1 113 +##PAF tr|O07416|O07416_MYCTU 530 0 530 + NC_000962.3 699930 202475 204065 1587 1590 0 AS:i:2753 ms:i:2753 np:i:530 da:i:-1 do:i:0 cg:Z:530M cs:Z:*ttgM:529 +NC_000962.3 miniprot mRNA 202476 204068 2753 + . ID=MP000091;Rank=1;Identity=0.9981;Positive=1.0000;Target=tr|O07416|O07416_MYCTU 1 530 +NC_000962.3 miniprot CDS 202476 204065 2753 + 0 Parent=MP000091;Rank=1;Identity=0.9981;Target=tr|O07416|O07416_MYCTU 1 530 +NC_000962.3 miniprot stop_codon 204066 204068 0 + 0 Parent=MP000091;Rank=1 +##PAF tr|O07423|O07423_MYCTU 369 0 369 - NC_000962.3 699930 209705 210812 1107 1107 0 AS:i:1961 ms:i:1961 np:i:369 da:i:0 do:i:0 cg:Z:369M cs:Z::369 +NC_000962.3 miniprot mRNA 209703 210812 1961 - . ID=MP000092;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07423|O07423_MYCTU 1 369 +NC_000962.3 miniprot CDS 209706 210812 1961 - 0 Parent=MP000092;Rank=1;Identity=1.0000;Target=tr|O07423|O07423_MYCTU 1 369 +NC_000962.3 miniprot stop_codon 209703 209705 0 - 0 Parent=MP000092;Rank=1 +##PAF tr|O07428|O07428_MYCTU 249 0 249 + NC_000962.3 699930 214968 215715 747 747 0 AS:i:1247 ms:i:1247 np:i:249 da:i:0 do:i:0 cg:Z:249M cs:Z::249 +NC_000962.3 miniprot mRNA 214969 215718 1247 + . ID=MP000093;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07428|O07428_MYCTU 1 249 +NC_000962.3 miniprot CDS 214969 215715 1247 + 0 Parent=MP000093;Rank=1;Identity=1.0000;Target=tr|O07428|O07428_MYCTU 1 249 +NC_000962.3 miniprot stop_codon 215716 215718 0 + 0 Parent=MP000093;Rank=1 +##PAF tr|O07437|O07437_MYCTU 615 0 615 - NC_000962.3 699930 224726 226571 1842 1845 0 AS:i:3169 ms:i:3169 np:i:615 da:i:-1 do:i:0 cg:Z:615M cs:Z:*gtgM:614 +NC_000962.3 miniprot mRNA 224724 226571 3169 - . ID=MP000094;Rank=1;Identity=0.9984;Positive=1.0000;Target=tr|O07437|O07437_MYCTU 1 615 +NC_000962.3 miniprot CDS 224727 226571 3169 - 0 Parent=MP000094;Rank=1;Identity=0.9984;Target=tr|O07437|O07437_MYCTU 1 615 +NC_000962.3 miniprot stop_codon 224724 224726 0 - 0 Parent=MP000094;Rank=1 +##PAF tr|O33266|O33266_MYCTU 503 0 503 + NC_000962.3 699930 400191 401700 1509 1509 0 AS:i:2660 ms:i:2660 np:i:503 da:i:0 do:i:0 cg:Z:503M cs:Z::503 +NC_000962.3 miniprot mRNA 400192 401703 2660 + . ID=MP000095;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot CDS 400192 401700 2660 + 0 Parent=MP000095;Rank=1;Identity=1.0000;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 401701 401703 0 + 0 Parent=MP000095;Rank=1 +##PAF tr|O33266|O33266_MYCTU 503 0 503 + NC_000962.3 699930 606550 608059 1506 1509 0 AS:i:2651 ms:i:2651 np:i:502 da:i:0 do:i:0 cg:Z:503M cs:Z::495*cacP:7 +NC_000962.3 miniprot mRNA 606551 608062 2651 + . ID=MP000096;Rank=2;Identity=0.9980;Positive=0.9980;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot CDS 606551 608059 2651 + 0 Parent=MP000096;Rank=2;Identity=0.9980;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 608060 608062 0 + 0 Parent=MP000096;Rank=2 +##PAF tr|O53482|O53482_MYCTU 357 0 224 + NC_000962.3 699930 227867 228545 195 711 0 AS:i:216 ms:i:207 np:i:115 da:i:108 do:i:1914 cg:Z:14M1I56M2D20M1I11M5I2M1I23M11D42M3I45M cs:Z:*cggM*ttaA:1*ctgV*gagS:1*cagE*cggQ*gtgA*tccT*ttcR*ggaR:1*gtgP+G*gctT:3*gtgA:1*cgcD*gagR*ataL*agcD:1*tcgI:1*cggG*gccD:2*accF*ctgV*gcgV*gtgL:2*gcgP*ccgS:1*agcC:2*tccT:1*ttgS*gcgL*tcgR*ctgM*gcgV*acgA*cgtG*tgcL*tacE*gacT*gtcL*acaD*cagC:1*gcgR*gtgI:3*ggtE*cagR:2*cgcT:1-ctgacg*ctcV:1*tcgP*ctgK*cggD*tcaR*gccD*atcV*ggcA*ctgM:1*cccF*gaaQ*gatN*gccY*gtcA:1*ttcY*tccP*ggaH+M:1*atcV*ggtA*gcaQ:1*atcM*gccG*tatF*ggcA*cgcL*ccgK+VAKIG*gatK:1+E*acgI*cccR:1*cagR*attV*gccL*acgA:2*cggK*gcgL*gcgL*cacD*atcL*gagQ*gagS*ttcY*gtcL*aacD*actR*ctgK:1*gacK-gggtatcagacggccgtcggtgcgcgcggactg*acgD:8*atcV:1*ctgM*gccG:2*ctaI*ctgV*cacR*cagR:1*cggQ*ttgV*ttgF*atcL:2*gacE:1*accL:1*gccN*gtgL:2*gtcK*atcL*gaaR*tgcG*ggaQ*attT*cagR*gagN+QIA*gtgA:1*cggQ*gagR*gcgQ*atcL*gcgG*gatT*cgcT:1*gcgV*gtcY*attV*ttcT*accH*cgcD*cgcQ*cgaV*tccE*atgA*cttM:1*ttgM*gccG:6*gacS*tccD:1*cgcV:1*ctcQ*gatQ*gtcC*ggcA*accS:1*gacR:1*gtgL*tggY +NC_000962.3 miniprot mRNA 227868 228545 207 + . ID=MP000097;Rank=1;Identity=0.2743;Positive=0.4852;Target=tr|O53482|O53482_MYCTU 1 224 +NC_000962.3 miniprot CDS 227868 228545 207 + 0 Parent=MP000097;Rank=1;Identity=0.2743;Target=tr|O53482|O53482_MYCTU 1 224 +##PAF tr|O53612|O53612_MYCTU 189 0 189 - NC_000962.3 699930 74631 75198 564 567 0 AS:i:935 ms:i:935 np:i:189 da:i:-1 do:i:0 cg:Z:189M cs:Z:*ttgM:188 +NC_000962.3 miniprot mRNA 74629 75198 935 - . ID=MP000098;Rank=1;Identity=0.9947;Positive=1.0000;Target=tr|O53612|O53612_MYCTU 1 189 +NC_000962.3 miniprot CDS 74632 75198 935 - 0 Parent=MP000098;Rank=1;Identity=0.9947;Target=tr|O53612|O53612_MYCTU 1 189 +NC_000962.3 miniprot stop_codon 74629 74631 0 - 0 Parent=MP000098;Rank=1 +##PAF sp|P71592|WHB5A_MYCTU 139 0 139 - NC_000962.3 699930 27025 27442 417 417 0 AS:i:740 ms:i:740 np:i:139 da:i:0 do:i:0 cg:Z:139M cs:Z::139 +NC_000962.3 miniprot mRNA 27023 27442 740 - . ID=MP000099;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P71592|WHB5A_MYCTU 1 139 +NC_000962.3 miniprot CDS 27026 27442 740 - 0 Parent=MP000099;Rank=1;Identity=1.0000;Target=sp|P71592|WHB5A_MYCTU 1 139 +NC_000962.3 miniprot stop_codon 27023 27025 0 - 0 Parent=MP000099;Rank=1 +##PAF sp|P95225|Y268_MYCTU 169 0 169 - NC_000962.3 699930 322766 323273 504 507 0 AS:i:877 ms:i:877 np:i:169 da:i:-1 do:i:0 cg:Z:169M cs:Z:*gtgM:168 +NC_000962.3 miniprot mRNA 322764 323273 877 - . ID=MP000100;Rank=1;Identity=0.9941;Positive=1.0000;Target=sp|P95225|Y268_MYCTU 1 169 +NC_000962.3 miniprot CDS 322767 323273 877 - 0 Parent=MP000100;Rank=1;Identity=0.9941;Target=sp|P95225|Y268_MYCTU 1 169 +NC_000962.3 miniprot stop_codon 322764 322766 0 - 0 Parent=MP000100;Rank=1 +##PAF tr|P95227|P95227_MYCTU 560 0 560 + NC_000962.3 699930 324566 326246 1680 1680 0 AS:i:2839 ms:i:2839 np:i:560 da:i:0 do:i:0 cg:Z:560M cs:Z::560 +NC_000962.3 miniprot mRNA 324567 326249 2839 + . ID=MP000101;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95227|P95227_MYCTU 1 560 +NC_000962.3 miniprot CDS 324567 326246 2839 + 0 Parent=MP000101;Rank=1;Identity=1.0000;Target=tr|P95227|P95227_MYCTU 1 560 +NC_000962.3 miniprot stop_codon 326247 326249 0 + 0 Parent=MP000101;Rank=1 +##PAF sp|P9WG83|Y097_MYCTU 289 0 289 + NC_000962.3 699930 106733 107600 867 867 0 AS:i:1560 ms:i:1560 np:i:289 da:i:0 do:i:0 cg:Z:289M cs:Z::289 +NC_000962.3 miniprot mRNA 106734 107603 1560 + . ID=MP000102;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WG83|Y097_MYCTU 1 289 +NC_000962.3 miniprot CDS 106734 107600 1560 + 0 Parent=MP000102;Rank=1;Identity=1.0000;Target=sp|P9WG83|Y097_MYCTU 1 289 +NC_000962.3 miniprot stop_codon 107601 107603 0 + 0 Parent=MP000102;Rank=1 +##PAF sp|P9WGG1|GMHA_MYCTU 196 0 196 + NC_000962.3 699930 137318 137906 585 588 0 AS:i:981 ms:i:981 np:i:196 da:i:69 do:i:0 cg:Z:196M cs:Z:*gtgM:195 +NC_000962.3 miniprot mRNA 137319 137909 981 + . ID=MP000103;Rank=1;Identity=0.9949;Positive=1.0000;Target=sp|P9WGG1|GMHA_MYCTU 1 196 +NC_000962.3 miniprot CDS 137319 137906 981 + 0 Parent=MP000103;Rank=1;Identity=0.9949;Target=sp|P9WGG1|GMHA_MYCTU 1 196 +NC_000962.3 miniprot stop_codon 137907 137909 0 + 0 Parent=MP000103;Rank=1 +##PAF sp|P9WHK5|PYRH_MYCTU 261 152 261 - NC_000962.3 699930 26287 26566 99 330 0 AS:i:55 ms:i:55 np:i:47 da:i:39 do:i:372 cg:Z:44M5I7M2I4M2I7M8I13M1D17M cs:Z::1*aagF*tccG:2*acgM*cggG:1*gtcP*tgcY*cagF*atcS*caaT*aacD*cggT:1*cagA:1*gagQ:3*cagE*gtcI:4*ttgV*gtgL*gctM*cagA*ggcK*accA*gagV*gccD:1*gggV*cacF*ggcA*cacE*ggtD:2+VNPEA*tccE*accL:2*ttgA:1*cccS+HR:1*atcV*gtcL:1+RG:1*gtcR*accV:1*cggD*ggaA:1+AFSLCMDN*gatG*atcM:1*gtgI*atcL*gccV*gccF*gggN*ggcL*atcL*gccT:2-cgg*ggcN*cttI:1*gccR:1*ttgV*atgR*ttgG*ggcE*gccK*gccI:1*gtaT:2*ggtT:1 +NC_000962.3 miniprot mRNA 26288 26566 55 - . ID=MP000104;Rank=1;Identity=0.3000;Positive=0.4273;Target=sp|P9WHK5|PYRH_MYCTU 153 261 +NC_000962.3 miniprot CDS 26288 26566 55 - 0 Parent=MP000104;Rank=1;Identity=0.3000;Target=sp|P9WHK5|PYRH_MYCTU 153 261 +##PAF sp|P9WI05|PPE32_MYCTU 410 0 410 - NC_000962.3 699930 466800 468004 531 1266 0 AS:i:651 ms:i:651 np:i:223 da:i:-1 do:i:126 cg:Z:165M1G14M6I25M1I9M2D25M1I9M6I39M1D16M3I10M1I14M2I37M9D26M cs:Z:*gtcM*atgL:11*gccG:1*atcM:1*tccA:4*aggG:2*atgL*caaA:5*caaD*cggA:2*aacA:2*accY*gcgS*acgA:4*tccG:1*gtgT:1*tccE:3*ggcV*gatA*gacP:1*ctgM:3*gcaS*ctgI*tcgT:4*gccV*gtcA:5*atgI*aggS*gccV:2*gccG*tcgQ:4*gcgG:3*gtgK*gccI:2*aacG*gccV:2*tcgT:1*tacF:6*acgP:2*gcgE:3*cgcA*acaL*atgL*ctgM:3*cagA:2*gttI:9*actA*agtT:1*acgA:2*ggcA:4*catQ:1*atcA*ttgA:2*gacY:4*gccS:1*gggA*gccT:4*cA*gccP*gttF*cacS*ccgE:2*gcgQ:2*agcN*gggP*gccS*gggA*tcgT+AAQSAV*ctgV*agtA*gacQ:2*gcgG*acaA:2*cagS*gcgS*gtaD*gtaI*ccgT:1*gccQ*gcgL*gcgS*accQ*gacL*gtgI:4+S:4*ttcL*ctaA*ccgT*ccgT*cccA-ttcgac*gccT*attA*ccgT*aacS*cccA*atcS*gagA*gatG*cttW:1*gttT*ctcV*gtaL*gccQ*gcaS*gctI*gtaT*gccT*gtcI*gcgL:1*ggcN*agtL*ttgT:1+P*gtaY:1*gcgI*gcgI*cagG:2*gagA:1+PGGWWL*tacT*cgcF*cacG*gacQ*gtgI*gtcL*gacG*gagL:2*aagN:2*catG*tgcV*ccaA:1*gaaL*tccL*gacG*cagP*acaK*cccA:1*gggA*gccG:1*ggtL*gacS*gggP*gatL*ctcA:1*gagL*gtcR:2*cggY*gtcI-acc*agcG*ccgD*ccaI*cagT:1*ccgL*gtcG*gccG*gcgG*ctcA:2*tacG*tccI:1*aacR+AIY*atcV:1*ggaS:4*cacQ*agcG:1+A*aatE*cttA*ccgA:1*gcgV*gtgM:1*caaA:2*gcgS*atgV*ttcL:1+GT:2*actA:1*atgA*tatL*atgA*acgA*gggE*agtA*tcgP*gacG*ggcA*tccL*tacF*gccG*ggcE*ctgM:1*gcgL*gcgS*ggtS:3*accR*ggtA:3*cttT:1*gccV:1*ggtS:1*tccA-gcgccgaccccggctgcagccgccccg*gccG*ggaA:1*ggcR*ggaV:2*ccgG*gctS*gccV:1*aggE*cccD*gccV:1*cagS*cagT:1*cccT*gcgI*gtcI*cccV*gcgI*gcgP:1*gccD +NC_000962.3 miniprot mRNA 466801 468004 651 - . ID=MP000105;Rank=1;Identity=0.4194;Positive=0.5284;Frameshift=1;Target=sp|P9WI05|PPE32_MYCTU 1 410 +NC_000962.3 miniprot CDS 466801 468004 651 - 0 Parent=MP000105;Rank=1;Identity=0.4194;Frameshift=1;Target=sp|P9WI05|PPE32_MYCTU 1 410 +##PAF sp|P9WJM5|MSRA_MYCTU 182 0 182 - NC_000962.3 699930 164714 165260 546 546 0 AS:i:983 ms:i:983 np:i:182 da:i:0 do:i:0 cg:Z:182M cs:Z::182 +NC_000962.3 miniprot mRNA 164712 165260 983 - . ID=MP000106;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJM5|MSRA_MYCTU 1 182 +NC_000962.3 miniprot CDS 164715 165260 983 - 0 Parent=MP000106;Rank=1;Identity=1.0000;Target=sp|P9WJM5|MSRA_MYCTU 1 182 +NC_000962.3 miniprot stop_codon 164712 164714 0 - 0 Parent=MP000106;Rank=1 +##PAF sp|P9WJT7|MMPLC_MYCTU 1146 21 997 + NC_000962.3 699930 597258 600012 798 2940 0 AS:i:936 ms:i:936 np:i:468 da:i:60 do:i:90 cg:Z:55M1I75M1I95M1D140M2I11M2D107M13I8M8I19M2I32M3I23M16I13M1D24M6I38M9I11M1I263M cs:Z::1*tttW*gcgP*gtgL*gtgI*atcV*gtcI*ctgG*ctcC:1*ctgI*ggcA*ttcV*accA:1*tttA*gtcL*aatT:1*gccL*gtaL:1*caaT:1*gaaQ*gtgA*gtcQ*ggaA*aaaA*gcaK*cacR*tcgE*gtaQ*tcgA*atgP*agcL:1*agcP*gacG:1*gcaP:1*attM*cagV*gcgL*atcQ:1*cgcE*gttM*ggtS*cagA*gtgA:1*ggtQ:1+K*tttI*gatE*tccT*gatS*aacA*gcgL*gtaL*acgL*atcV*gtgL:1*gaaT*ggcN*gacE*cagN*ccaG:2*gggP*gacA*gcgD*cacE*cggA*ttcV:1*agcR*gatK:1*atgI*cggE*aagN:1*tccR:3*cgcQ*catD*gtcK*gcgI*cacS*atcV:3*tggL*gggA*gatV:1*ctgE*acaM*gcgK*gcgE*ggaL*tccL*caaA:1*gcgK:1*gatN*cggK:1*gccW*tacN*gtcL*gtgP*gtgI*tacT*ctcF*gtcA:1*aacD*aacA*gaaA*accS+P:1*gcgT*tatQ*gacA*tcgA*gtcF*cacK*gcgR:1*cggA*cacA*atgI:1*gacK*accQ:1*ccgV*ccaA*ccgG*cacT*gggS*gtgL*aagT*gccV*tatH*gtcL*accS:2*gcaI:1*ctcT*aatV:2*cagL*gccT:1*gccL:1*gacE:1*agtD*atcV*gctR*aagI*gtcI*accE*gcgI*atcG:1*agcA*atgV*gtgS*atcV*gcaL*gcaI*atgI:1*ctaI*gtgL*atcV:2*tccN*gtaL*attV:1*gcgM*gttL*ctcV*gtcP:1*atcA*atgT*gtcI:1*atcA*gacS*ctcV*ggcV*gcaT*atcA*cgcQ:1*ttcT*atcL*gccS*ttgG:2*gacE*cacF*aacG*attL-ttc*agcA*cttV*tcaN*acaM*tttQ:1*accI*aacV*ctgF*ctcM*gttS*ctcA*atgV*gcgM:1*gcgG:1*agcG:4*ataV:1*atgL*ctcI*ggcS:3*gaaD*tcgY*cgcV*tacR*gccH:2*gatK*cggS*gaaD*acgM:1*ttcV*tacK*acgK*atgA*tttL*cacM*gggS*accI*gccG*cacK:2*ttgT*ggtA:1*ggtA*ttgA:1*attV:1*ggcV*gccT*atgF*tatL*tgcA*ctcM*agcV:1*gccT*cggK:1*ccgE*tatV:1*gaaS*acgA*ctcV:1*gcgP*cccA:2*atcV*ggcA*atgI*ctgT:1*gcgS*gtcL:1*gcgG:1*ctcV:2*ggcL:2*gtaI:2*gtgL*ggcT*agcG*ttcR*ttcR*aagG*ctgW*ttcI*gatK:1*aagR:1*cggD*atgL*aacT*actS:1*cggM:3*gtgS:1*acgV*gcaR:3*tggR*ccgS*gggT*ccgI*gtgH:1*gcgV*gcgG*acaS+LI*tgcV:3*tccL*attA:1*ttgC*ctgT*gccL:1-cccagt*tacI:1*acaF*acgN:2*ctgD*cgcL:1*ttcT*atgV:1*gccQ*agcH*atgV*ccgE:1*aatV*gtgK:1*gatY*gcgE:1*gctM*ggtN:1*cgcH:1*tcaP*cggM*gctN*cggA*ctgM*aacT:1*gagM:2*ttgF:1*gagK*actS*gacP*cacR:1*atgL:1*aatT:1*gtgG*gacA*atgL*ctgA*gtgD*ttgI*gacE*aagM*gtaM*gccS*aaaR*aatE:1*tacA*cacE*agtL:1*ggtN:1*gaaV*caaM:1*aaaR*gcgG*ataL:3*ttgN:1*acaE*accP*atcL:1*cacE:1*tcgK*ataV*ccgS:1*atcQ*atcA*agcG*atgE*cagV:1*gtgG*aatK*agtL*agcD:1*caaA*atgT*gaaT*ttcL*atgL*aagE*gacE+HGGELDQLTGGAH*cgaQ*attL*gatA:1*ataA:1*gtgA:1+IRNEINGA:2*gcgS*atgS*aatS*accG*tccI*atcV*gagN:1*atgL*catQ*cgcA:1*tatM*gcaD:3+GD*gagK*gtcT:1*gacR*aacQ*accL*gtcE*gacN*atgA*gatS*catQ*ctcY*acgV*catG*gatR:1*tcgR*gacA*ataL*acgG*gctD*acgN:1*agaS*gatG*catT*ctcV*gcgT:1*ttcA:1*gatQ+IAT*ttcW*ttcA*cggS:1*attM*cgcV*agcN*tacA*ttcL*tacN*tggS*gaaS*aaaP*catV:1*ttcN*gacS*gttD:1*ctcA:1*tggR*tcgT+SRAQLAAIVQAQDDGL*ataL:3*ttcR*gatA*atgL*tttA*gacV*agtT*gtgL*gacQ:1-ctg*agcT*gaaQ*aagE*ctcY*gagQ*tacT:1*gtcA*aagR*gatT*atgV*gatS*attT:1*attD*acaG*ctgQ:1*ccgK:1*atgV*cgcV*gcgS*cagT+LKAVDG*atgL:1*ccgT*atgK*ataL*tctA*gcgQ:1*acgQ*acgQ*atgG*cggA*gacN*atgA*atgL*cttA*atcD*tggG*catS*ggcA*acgA:1*ggcA:1*ttcG*tatV*aagQ*caaE*cagL*gagV*aggD*aatQ*aacV:1*gacK*cccM:1*gcgS+GLNEAADFL*atgL:1*cggI*gttK*tttR:2*gccD*cagK*atcP*gatS+M*gatA*tcgG:1*tatN*ctgI:1*cagP*tcgQ*gctI:1*gagS*aatR*ccgD*gatE:2*cggK:1*ctgA*aagQ*atgI:3*ccgA:2*aagH:3*tttY*gtcF*attV*gctQ*ctgS*gagA*ggaL*gatN:3*cccT:1*ggcA*atcM*tctD*cggQ:1*gagN*ccgD:1*aagL:1*gagV:1*agaD*gagS:1*ataR*aagP*ggaN:1*ccaE:1*cagE*ggcD:1*gcgT:1*tatG:1*ggtA:1*accV*gcgP*gcgT*acgA*ttcL*aagR:3*gagD*ggcY*gccY*agaN*tacS:1*ctgM*ctgK*atcF*gccI*ggaV*gtgI:1*gcgT:1*agcV*ttgI*attV*ttgF*atcL:1*atgL*atgV:1*atcL*accL:1*agtA*gtgL:2*gcaP*gtgI*gttY*atcL*gtgI:1*accS:1*gtgL*cttI:1*atgY*ggcL*gccS*tctA*ttcL:1*cttI*tccG*gtaT:2*tggF:1*gacL:3*atcQ:1*ttgM*tacH:1*atgS*gtgL*ttgP*gcgG*atgL:1*gtgF:3*ctgV:1*gtgI:1*tccA:3*ctgM:5*ttgI*aaaR*gagD:1*attS*gggP*gccH:1*ttgI*aacR*accI:1*attV:2*gccT*atgV*gctG*ggtS:4*gtgI:1*gctS:2*atgL*gtgI:2*gttA*accS:1*tcgF*ttgG*tttL:1*ttcG*agcA*gatS*ttgI*cgaN*attT*attM*ggtA:1*atcA:1*accF:3*ctgI:1*ttgI*ctgV*ttcL:2*ctcF*gtcL:2*tcgT*ttcV*atgT*acaV:1*tccA*attL*gctT*gcgT*ctgM*ctgI:2*tggA*ttcN:3*ctaS*cggE*gtgL*cgcG*ccgR*cgcD:1*gccS*agtT +NC_000962.3 miniprot mRNA 597259 600012 936 + . ID=MP000107;Rank=1;Identity=0.2714;Positive=0.4776;Target=sp|P9WJT7|MMPLC_MYCTU 22 997 +NC_000962.3 miniprot CDS 597259 600012 936 + 0 Parent=MP000107;Rank=1;Identity=0.2714;Target=sp|P9WJT7|MMPLC_MYCTU 22 997 +##PAF sp|P9WQM9|ANSP1_MYCTU 489 12 489 - NC_000962.3 699930 415480 416926 1035 1446 0 AS:i:1774 ms:i:1774 np:i:394 da:i:39 do:i:3 cg:Z:468M2D3M3D6M cs:Z::1*gacE*acgA:6*catK*agcP:6*gctG*ctcI:17*tcgK:10*atcV:2*atcV:29*tacF:3*gtgA:1*ttcY*gtcA*gccV:6*aacH:4*gggS:8*cacT:1*tgcL*catQ*tacR:1*cggT*gcgI:1*caaT*cccV*atcV:3*acgI:6*ctgT:10*aggE*ctcW:8*tcaA:4*atcL:2*gttM*acgA:2*atcV:10*aagP*atcV:2*cagH*gagS:2*gtcL:3*agcN*agcN:3*atcL*gtgF:2*ggtS*ctgW:2*ataL*gtgL*ctgI:9*gccS:1*atcV:4*atcT:8*gcaE:11*ttgA:3*tgcI:5*actV*gtcA:12*gaaA*catG*gtcE:11*atcF*gacH*gcgG:2*agcD*gtgL:2*ctcI:19*atcV*ctgM*cgaH:1*atgI:1*atcM*aacS:2*ggcA:5*ccaR:3*accS:7*ctgV:3*ggtV:1*ggcT:1*ttgF:1*atcV*attA:3*atcF:2*agcG*caaE:6*cacN*atcM*gccS:1*acgL:1*gtcI:2*gccG:5*gctL:6*cggK*atgL:4*cagI*ctgM:3*aaaR:4*cttF:2*ttcY:6*gctL:2*gccL*ggcV:2*atcV*ctgT:1*tacA*ttcS:1*gaaK*caaP*cacI:1*cccT:1*atgT*atcV:1*gcaT*acgL*gtgI:1*ggtV*gtaI:3*atcT*ggtA:6*aatK:2*acgM:3*cacR*cacE*gccR*atcL*gacG:2*aagG*agtP*gtcF*gcgP*gtcA:1-cattcg:1*gatN:1-atctgaggt:1*cgtV:1*catS:2 +NC_000962.3 miniprot mRNA 415481 416926 1774 - . ID=MP000108;Rank=1;Identity=0.7158;Positive=0.8174;Target=sp|P9WQM9|ANSP1_MYCTU 13 489 +NC_000962.3 miniprot CDS 415481 416926 1774 - 0 Parent=MP000108;Rank=1;Identity=0.7158;Target=sp|P9WQM9|ANSP1_MYCTU 13 489 +##PAF tr|Q6MX26|Q6MX26_MYCTU 615 0 615 + NC_000962.3 699930 361333 455855 1056 1956 0 AS:i:1521 ms:i:1564 np:i:396 da:i:90 do:i:0 cg:Z:101M2I23M1D115M3D20M4I34M4D23M1I17M5D36M1I11M11D31M4D11M7I2M1I19M5D19M1I33M4D9M3I23M92629N9M1I58M cs:Z:*gtgM*tccL*tttY:1*atcV:1*caaS:1*gagD*atgL*atcM*gcgT:3*ggtT*gagN:2*agcE:1*agaG:3*aacS*gcgT:2*gcgG:3*gccL*cagP:1*accV*ggaE:1*atgV*tcgA:8*gcgQ*gttI:4*tccG*tcgA:2*cagR*gccS:2*gccT*gccL:1*gcgT:6*gccS*cagR*gtgF:1*cggQ*accA:2*gtgT*gacA:1*ggaA*gcgS:3*gccV:5*gggS:1*aacL*atgQ*ctgV:1+LD*gcgV*gtcI:5*gcgT:11*aacD:1*gcgS*ccgT-ggc*accP:5*gacP:4*ttcY:6*gggA*tccA:1*gcaG:1*ggaN:7*gcgN:2*ttcL*ttcI:4*aacA:2*gacA:2*gccV:2*aacV:2*gccK*ggcR:2*gccG:1*tggL*ttcL:2*ttcN:2*aacA:2*gccQ:2*atcL:1*gttL:6*ctcS:2*gccQ:2*gacH:4*gggI*ttcL:2*aacQ:2*aacA:2*atgP:2*gccT:2*gccM:2*aacA*gccG*gtcT:2-ggcctggcc:2*gtcI*accG*ccgT:2*aacP:1*ggcS*aacD:1*ctcV:1*ctcQ*gtcI:1*gttN*cccG:1+NTDL:1*gccG:1*ggcA:1*gccG:2*gccN*aacA:2*gccT*attT*ggcV*cagN*gcgG:1*ggcN*gctG:1*ggtT*gacG:1*ggcA*aacA*gccR*tccN*acgS:3*atcT:1-atcgcgcaaacc*gggN*ggcS*gccF:11*cccN:2*aacD:2*aatA:2+E*agcA*gtcL*gagT*cacE*actG:3*ggcA*tccV:1*gcgG*agcA:2*aatK:1-gccaccggcgggaac:1*gggN*gtcA*ggtE:1*cccS:8*cacK*gtcG*agcG*ggcF*ggaA*tcgQ*gtcA*aacT:1*gccS*ggcV*gccT:2*aaaN:5*accN:1+H*ggcD*gccS*ggcN*ggcA:3*cacA:3-gttctatccggcccggttggcgacagtggcaac:2*gccV:5*gccR:1*gttG*agcL*gccL*accA*gatG*atcN*gccG:4*cgcA:5*catT:2*ctgA-tggatcggcaac:1*ggcA*gacP:5*gtcA:2+KADIANS*gtcL:1+D*gggN:1*ggtT*gcgV*gctT:1*gcgG*atcN:2*cacT:6*gtaA*aatL-acccctattggcggc*agcG*gagT*gccG:1*gacA:2*aagA:5*gacH:2*gggA*cgcG:1+L*ataL*ttcI:1*cagN*tttG:7*gccL:2*gtcA:8*accE:2*ggcA:2*aacA:2-gccattttcaat*gccE*ggtA*accI:2*gccG:1*ggcS:1+NSA:5*gttA:4*gcgG*gccN:2*aaaD:5*agcA*ggcP:1~gt92629ag*gccL:1*aatG:1*gacG:1*aacA:2+W*tccL*gcgI:1*ttgQ*atcS:2*ggcT:1*gccG:2*gacA:2*agcA:3*accG:4*gaaA:2*gatS*gctG:2*agcG:1*tccH*ataG*aacD*ggcT*aacT*gccS:1*gacK*cccN:1*aacS:2*gaaT*cgcA:1*gcaF*gtgD:1*aagN:2*gcaQ:2 +NC_000962.3 miniprot mRNA 361334 455858 1564 + . ID=MP000109;Rank=1;Identity=0.5399;Positive=0.6074;Target=tr|Q6MX26|Q6MX26_MYCTU 1 615 +NC_000962.3 miniprot CDS 361334 363025 1408 + 0 Parent=MP000109;Rank=1;Identity=0.5428;Target=tr|Q6MX26|Q6MX26_MYCTU 1 547 +NC_000962.3 miniprot CDS 455655 455855 156 + 0 Parent=MP000109;Rank=1;Identity=0.5147;Target=tr|Q6MX26|Q6MX26_MYCTU 548 615 +NC_000962.3 miniprot stop_codon 455856 455858 0 + 0 Parent=MP000109;Rank=1 +##PAF sp|Q6MX39|UMAA_MYCTU 286 0 286 + NC_000962.3 699930 559887 560745 858 858 0 AS:i:1492 ms:i:1492 np:i:286 da:i:0 do:i:0 cg:Z:286M cs:Z::286 +NC_000962.3 miniprot mRNA 559888 560748 1492 + . ID=MP000110;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|Q6MX39|UMAA_MYCTU 1 286 +NC_000962.3 miniprot CDS 559888 560745 1492 + 0 Parent=MP000110;Rank=1;Identity=1.0000;Target=sp|Q6MX39|UMAA_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 560746 560748 0 + 0 Parent=MP000110;Rank=1 +##PAF tr|Q79FV3|Q79FV3_MYCTU 606 0 606 + NC_000962.3 699930 361333 455846 1071 1992 0 AS:i:1567 ms:i:1612 np:i:406 da:i:90 do:i:9 cg:Z:97M2I143M3D14M1I20M1D12M1I8M6D19M9D14M6D6M13D26M2D73M1I19M14D26M2D57M2D92545N14M3I50M cs:Z:*gtgM:1*tttY:1*atcL:1*caaT:3*atcV:4*ggtN*gagN:2*agcQ:1*agaG:1*gcgT*atcL*aacS:6*gcgL:1*cagP:4*atgL*tcgA:1*gccG:5*acgA:3*gcgS:3*tcgG:6*gccT*gccL*agcG*gcgT:6*gccE*cagR*gtgF*gtgI*cggQ*accA:1*accS*gtgT*gacA:4*gccG:7*gggS:1+LQ*aacQ*atgA:1*gccN*gcgV*gtcI:3*gccT:1*gcgT:10*gccT:11*gacP:4*ttcY:9*gcaG*cccV:8*gcgS:2*ttcL*ttcI:1*aacI:2*aacT:2*gacA:5*aacV:2*gccV:2*accN*gccG:2*ttcL*ttcY:1*ttcN:2*aacA:2*gccL:2*atcT:4*atcV:3*ctcM:1*ggcA:3*gacA:4*gggY*ttcL:2*aacS:2*aacA:2*atgQ:2*gccM:4*gtgA*aacD*gccG:3-ggcctggcc:2*gtcT*accG*ccgT:1*gccD*aacA:1*ggcS*aacT:1*ctcT*aacD+Q*ctcT*gtcL:1*gttG*cccN*ggcA*accI*gccG:1*ggcN:1*gccG*gatP:1*gccD*aacA:1*agtD:1*attM-ggc*cagT*gcgS:5*gacS:4+V:2*agtV*gggN:1*atcD*gggA*atcV-gcgcaaaccgggggcgcc:2*gctE:2*gccK:2*gacE:2*cccY:2*aacA:2*aatA:1-ggcagcgtcgagcacactggcgctacc:2*tctA:2*ggcI:2*ggtA:1*accI:3-ggcggggtcggtgcgccc:6-ggcggccacgtcagcggcggatcggtcaacacagccggc:1*ggtQ*ggcA*aaaP:2*aacV:2*accA:2*gccE:2*ccgD*ggcA*ggcQ*cacV:1*ggcT*agcN*gttS*ctaP:1*ggcN-ccggtt*ggcA*gacE*agtA:4*gccS:2*gacN:1*gggF*gccD*gggS*gttF*agcA*gccS*accG*gatG*atcT*gccG:1*accA:2*cgcT:2*aacA:2*catR:3*tggL:2*aacD:2*gacA:8*gtcT:2*gccS:2*gctP:1*gcgG*atcG:2*cacA:5*tccA*gtaA:2+D*cctS*attA:1*ggcS:1*gagR*gccK*ggtA*gacF:2*aagD:2*ctgV:4-ggtgggcgcgggatattcggccagtttggggccggcggggcc*ggtA*ggtS:1*ggaL:1*gtcT:2*gccE:2*gctI:2*accQ:2*ggcN:2*aacA:2*gccL*attL*ttcI-aatgcc:1*accN*cccG:2*gccG:1*acgV:2*gacT*ggcA:1*gttA:4*gcgG*gccS:2*aaaA:5*agcA:2*gtcG*aacG*ggcT*gccN*accS:1*gccP*gacG*ggcA:1*aagF:1*ctcG*gacN:1*gccN:3*aaaN:1*aacG:2*aacG*cccA-ggctga~gt92545ag*gccP:1*aatA*gcgL*gacG:1*aacK:3*gcgG:3+GRA:2*ggcD:1*gccG*ggcV:1*gacA:2*agcA:3*accG:4*gaaT:2*gatE*gctG:1*gcaT*agcG:1*tccD*ataG*aacK*ggcT*aacT*gccD:1*gacN:2*aacM*agcG:1*gaaS*cgcP:1*gcaS*gtgA:1*aagQ:2 +NC_000962.3 miniprot mRNA 361334 455846 1612 + . ID=MP000111;Rank=1;Identity=0.5377;Positive=0.6114;Target=tr|Q79FV3|Q79FV3_MYCTU 1 606 +NC_000962.3 miniprot CDS 361334 363109 1458 + 0 Parent=MP000111;Rank=1;Identity=0.5427;Target=tr|Q79FV3|Q79FV3_MYCTU 1 539 +NC_000962.3 miniprot CDS 455655 455846 154 + 0 Parent=MP000111;Rank=1;Identity=0.4925;Target=tr|Q79FV3|Q79FV3_MYCTU 540 606 +##PAF sp|I6XD69|PKS12_MYCTU 4151 909 3370 + NC_000962.3 699930 374526 572366 2709 7766 0 AS:i:2416 ms:i:2637 np:i:1225 da:i:-1 do:i:696 cg:Z:11M3D91M46700N18M2D10M2I13M3I7M2I5M1099V17M2001U17M4D15M2I26M3D21M1I25M6D5M3D2M9I22M3I45M1D8M7D7M2D29M5I10M1I11M4I36M5I5M7I17M1I33M1D15M11I5M9I34M14I22M2I23M14I10M11I8M3D7M5I18M3I9M4I9M3I10M5I20M6D37M1D21M2D3M1D11M1I13M6D51M2D11M1I21M3D10M26698U7M4D9M3D21M1D2M31784U7M3I13M1I77M5D38M1I8M11I81M4D194M1I30M1D12M1I25M1D22M6D13M1D44M1D366M2D39M2I8M13612V12M3I3M2F30M2I24M6D8M6D14M10I7M1D7M4I47M1I6M14D27M4I20M68738N9M1D20M6I22M1I7M2I15M3D22M3D22M2D40M2D10M4D13M 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+NC_000962.3 miniprot mRNA 374527 572366 2637 + . ID=MP000112;Rank=1;Identity=0.3488;Positive=0.4732;Frameshift=1;Target=sp|I6XD69|PKS12_MYCTU 910 3370 +NC_000962.3 miniprot CDS 374527 374841 57 + 0 Parent=MP000112;Rank=1;Identity=0.2476;Target=sp|I6XD69|PKS12_MYCTU 910 1011 +NC_000962.3 miniprot CDS 421542 421708 38 + 0 Parent=MP000112;Rank=1;Identity=0.3333;Target=sp|I6XD69|PKS12_MYCTU 1012 1071 +NC_000962.3 miniprot CDS 422805 422857 16 + 1 Parent=MP000112;Rank=1;Identity=0.3333;Target=sp|I6XD69|PKS12_MYCTU 1072 1089 +NC_000962.3 miniprot CDS 424856 427117 56 + 2 Parent=MP000112;Rank=1;Identity=0.2389;Target=sp|I6XD69|PKS12_MYCTU 1090 1913 +NC_000962.3 miniprot CDS 453813 453956 35 + 2 Parent=MP000112;Rank=1;Identity=0.3333;Target=sp|I6XD69|PKS12_MYCTU 1914 1953 +NC_000962.3 miniprot CDS 485738 488735 2314 + 2 Parent=MP000112;Rank=1;Identity=0.5005;Target=sp|I6XD69|PKS12_MYCTU 1954 2951 +NC_000962.3 miniprot CDS 502345 503043 64 + 1 Parent=MP000112;Rank=1;Identity=0.2494;Frameshift=1;Target=sp|I6XD69|PKS12_MYCTU 2952 3181 +NC_000962.3 miniprot CDS 571782 572366 57 + 0 Parent=MP000112;Rank=1;Identity=0.2500;Target=sp|I6XD69|PKS12_MYCTU 3182 3370 +##PAF tr|O06311|O06311_MYCTU 275 0 275 + NC_000962.3 699930 438821 439646 825 825 0 AS:i:1408 ms:i:1408 np:i:275 da:i:0 do:i:0 cg:Z:275M cs:Z::275 +NC_000962.3 miniprot mRNA 438822 439649 1408 + . ID=MP000113;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06311|O06311_MYCTU 1 275 +NC_000962.3 miniprot CDS 438822 439646 1408 + 0 Parent=MP000113;Rank=1;Identity=1.0000;Target=tr|O06311|O06311_MYCTU 1 275 +NC_000962.3 miniprot stop_codon 439647 439649 0 + 0 Parent=MP000113;Rank=1 +##PAF tr|O07175|O07175_MYCTU 355 0 355 + NC_000962.3 699930 151147 152212 1065 1065 0 AS:i:1803 ms:i:1803 np:i:355 da:i:0 do:i:0 cg:Z:355M cs:Z::355 +NC_000962.3 miniprot mRNA 151148 152215 1803 + . ID=MP000114;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07175|O07175_MYCTU 1 355 +NC_000962.3 miniprot CDS 151148 152212 1803 + 0 Parent=MP000114;Rank=1;Identity=1.0000;Target=tr|O07175|O07175_MYCTU 1 355 +NC_000962.3 miniprot stop_codon 152213 152215 0 + 0 Parent=MP000114;Rank=1 +##PAF tr|O33203|O33203_MYCTU 556 0 519 - NC_000962.3 699930 367531 416962 618 1569 0 AS:i:782 ms:i:874 np:i:291 da:i:3 do:i:126 cg:Z:127M2D62M2I11M1D163M2I26M1D37M2155V17M33299U21M2I8M12435V38M cs:Z:*ccaM:1*ctaD:2*accA*gacA*gagA*cggD*ctcP:1*cgcD*gaaT*gacQ*acgP*ggcH*tatL*cacR*aaaR*ggcD:1*catA*agcN:1*caaH*ctgI:1*atgL:2*ctcI:9*ctcM:1*gccS:1*ggcR*cgcT*cttI*gcaS*tcgL:3*ggtA*ttgV*ttcM*ctgV:4*tgcI:1*atcF:3*ctgF*atcV:3*ctcM:3*gtgL:1*cacS*cgtN*ccgL*tccN*tcgY*gggK:3*tccD*tacF:1*cgcA*gagD*ttcL*tacR:1*gaaP*aagA*gtgA*gccG:1*gtcF*gccV:2*atgS:1*ttcW*ctgF*aacA:1*gcgV*atgV:3*gtcA:1*accL*accV:2*gcgT*cacG:1*tgcA*catR*tacF:1-cgggcg*tttW*caaP*cccG*atcL:1*cagI:1*acgV*ctgP:2*atcV*gcgT*ctgV*ctgA*gtcL*gtgI:1*tcgA*atgV:2*atcF:3*ctcH:7*gccF*tcaA:4*atcA:1*ctgI:1*acgC*tttL*ctgI*atcA:2*acgA*gtcI*tttL*ctcV:1*gggT*cgcN*tacF*aagV*atcS*gacP*ggcH+GV*cagH*gagA:1*gggI*gtcE*tccN:2*agcN*agcD*catN-gga:1*atcF*gtgF:3*ctgF:1*cccG*ataV:1*ctgS*gtcG*accF*tcgQ*gggI*gtgA*gtaF:3*gccI*gcaG*atcV:4*atcT:2*gggA:3*gaaD:1*gcaR*aagR*atcT*atgL:5*tctA:1*gtgP:2*atcV:1*tgcV:2*gtcI:1*tcgA*actL*gtcL*ctgA*ctgI*gccL*ctgA*ctgV*ctgV:1*tatW*accR*gccQ*tacF*aaaA*gaaS*catG*gtcE:5*ttcM:2*aagL*atcA:1*atcL*gacA:2*ggcA:2*atgV:1*ctcF:2*ctcV:3*ctgA:2*ctcA:1*gccS:1*ctgF*tatF:4*atcM:1*cgaF*tcaG*atgL:1*atcD*aacE:1*agcH*ggcA:1*aggA*ttcA*accF*gcaH*ccaQ*atgL*tcgN*aagR*accG:3*tacA*ggcP*gggA*atcL:4*ggtP*atcL*ggcL:1*ttgT*ggcS:1*attP:1*aacL*gccY*atcA*aaaG*ccgR:1+VI*caaG:2*gagT*atcL:1*ctcT*cacT*atcV*gccS*gcgS*acgL*ggaL*gtcF*atcM*gcgF*gccV:2*acgM:1*gtgI*gctI*tgcS*cagY:1-cgg*ctcV*cacY:1*atgR*gcgR*aacH*gccP*gggQ*cagR*ctgH*cagT*cggD*ccgS*aaaV*ttcY*cggK:2*cttG*tcaG*ccgV*ttcV*agcM*ggcC*tatW*ctgA*acgV:1*gctV:1*ctgF:1*ggcF:1*ctgI*atcW*ctgT*atL~gt2152ag-c*gcaT*agaT*agtE*ccgT*gatE:1*ggcA:1*accA*gccL*tggA*caaW*atgF:1*atcL:2*aV~gt33296ag-gc*gccL*gtcL*ggcA:3*cgaL:1*gtgT*cacQ*cacR*cagR*acgQ*gtcS:2*cgtS:2*cagF:1+CQ:1*accV:1*cggV*gttR*gagQ:1*cggL*gtG~gt12432ag-c*aaaR*ccaG*tcaM:1*tggR:2*ccgM*gcgK*gctI*tcgH:2*tccP*ccaK*tcgL*gcaR:2*tcgV:2*cccE*cggP:3*actG*cgaE:1*ccgG:3*cggS*gttA*tctK:1 +NC_000962.3 miniprot mRNA 367532 416962 874 - . ID=MP000115;Rank=1;Identity=0.3939;Positive=0.5564;Target=tr|O33203|O33203_MYCTU 1 519 +NC_000962.3 miniprot CDS 415671 416962 756 - 0 Parent=MP000115;Rank=1;Identity=0.3954;Target=tr|O33203|O33203_MYCTU 1 430 +NC_000962.3 miniprot CDS 413466 413518 28 - 1 Parent=MP000115;Rank=1;Identity=0.2778;Target=tr|O33203|O33203_MYCTU 431 448 +NC_000962.3 miniprot CDS 380079 380169 40 - 2 Parent=MP000115;Rank=1;Identity=0.3750;Target=tr|O33203|O33203_MYCTU 449 480 +NC_000962.3 miniprot CDS 367532 367646 50 - 1 Parent=MP000115;Rank=1;Identity=0.4474;Target=tr|O33203|O33203_MYCTU 481 519 +##PAF sp|O53672|Y250_MYCTU 97 0 97 - NC_000962.3 699930 301737 302028 288 291 0 AS:i:497 ms:i:497 np:i:97 da:i:-1 do:i:0 cg:Z:97M cs:Z:*ttgM:96 +NC_000962.3 miniprot mRNA 301735 302028 497 - . ID=MP000116;Rank=1;Identity=0.9897;Positive=1.0000;Target=sp|O53672|Y250_MYCTU 1 97 +NC_000962.3 miniprot CDS 301738 302028 497 - 0 Parent=MP000116;Rank=1;Identity=0.9897;Target=sp|O53672|Y250_MYCTU 1 97 +NC_000962.3 miniprot stop_codon 301735 301737 0 - 0 Parent=MP000116;Rank=1 +##PAF tr|O53675|O53675_MYCTU 118 0 118 + NC_000962.3 699930 305452 305806 351 354 0 AS:i:603 ms:i:603 np:i:118 da:i:-1 do:i:0 cg:Z:118M cs:Z:*gtgM:117 +NC_000962.3 miniprot mRNA 305453 305809 603 + . ID=MP000117;Rank=1;Identity=0.9915;Positive=1.0000;Target=tr|O53675|O53675_MYCTU 1 118 +NC_000962.3 miniprot CDS 305453 305806 603 + 0 Parent=MP000117;Rank=1;Identity=0.9915;Target=tr|O53675|O53675_MYCTU 1 118 +NC_000962.3 miniprot stop_codon 305807 305809 0 + 0 Parent=MP000117;Rank=1 +##PAF sp|O53945|MYCP5_MYCTU 585 14 585 + NC_000962.3 699930 354503 355877 687 1740 0 AS:i:916 ms:i:857 np:i:292 da:i:6 do:i:3 cg:Z:18M2I94M1I13M40I2M25I1M14I1M5I4M6I1M7I4M14I22M3I76M4D2M1D49M1I28M1D82M3D5M4I47M cs:Z::2*gcaG*tttT:1*tgtT*ctgI:2*accV*gtgL*gtcL*gttA*gcgS:1*tggA*tggL:1+GL:3*tggY:2*gggS:2*gtgT*gtgI:1*gccP*gccG:1*caaL:2*agcD:1*gacP:3*gtgL:3*gaaK:1*cgcN*ggtA*gcgY:1*agcT*gtcE*tccV:2*atcL:4*ccaF*ggcQ*gtaL*ccgQ*acgP*cccK*agcY*caaM*acgE:4*cctN*gcgE:4*tccG:2*gagD:1*cagV*ctgK:2*atcV:5*cagT:1*ggcH:4*aacR*gtcL*gatI*gccP:3*ttcY:1+M*gagA*tcgG*accG:3*accS:3*gggA:2+TLVASMIAAVPANGAVPLPSVPRRPVTIPTTETPPPPQTV:2+SPVPPQTVTVIPAPPPEEGVPPGAP:1+PGPEPPPAPGPQPP:1+VDRGG:1*atcT:1*gccT+VPSYSG:1+RKIAPID*cagN:1*ggtR:1+PHPSAPSPALGPPP:1*ggcA:3*gtgI:2*gcgG*gcgV*cggE*ctgI*ctgI:3*gcgQ*atgS:1*acgQ*aagA:1+GLK*tcaD:1*cgcY:1*tcgG*gggD*ggcE:3*ctgT:2*gccK*acaI*cttD*gacN:1*gcgE*gtgT*ctgM:1*ggtR:6*gacN*cttM:2*aagS:3*gtcI:1*acgD*atcV*accM:1*ctaM*cccS:1*gatR*cggN*atgV*gtcI:2*gccR:5*atcV*cggH:15*aacD-accggagcgagc:2-gtc*agcK*gcgK*tcgD:1*gatK*tccQ:2*ttgI*accF:1*ctgP*agcL*cgcQ:5*aacA:1*gcgN*ggcA:2*tcgT:1*tccV*atcT:3*tggF*cagH*cccD:3*tcgT:1*gcgG*tcgA*ctcV*acaD*tccA*gccN:3+L:2*ttcM:1*atgI*cccA:4*ggcS:1*gccS:3*gaaT*aacD*attV*gcgV*tcgG*gtgL:1*aacP*tcaR*ggcD:2-gcc:1*gctI:1*ggaA*ctgI*cccD*gacG*gccP*cacD*cagN*aaaS:1*gtgL*gctV*ctcP*agcA:3*tacF*gcgS:1*ggcA*tatI:9*agcA*cgcK*tatF:1*gggE:1*aacS:1*accY*gagQ*gtgI*gtgI*cgcN:2*accI*gccH:2*cacR*cgcP*ggcP:2*gagG*tccV*tccD:1*atcQ:2*gccY:1*aacV*ctgV:1*gcgP:6*caaD*ctgV:1*gccK*gaaG:1-gggggcggt:1*gcaE:1*gccP:1+QLSA:1*gtcL*gccV*gatV:1*ccgQ*gtcP:3*aaaR:1*accM*acaV:1*cgcI*aacW:2*ttcA*gccG:1*gcaL:1*gcgG*ctgA*agcL*gtgL*ctgI*gtcG:1*ctcA*acaV*gccF*gcgG:1*gtcA*gcgT*ataL*gcgM:2*cgaS:1*gagK*cccQ*accQ +NC_000962.3 miniprot mRNA 354504 355877 857 + . ID=MP000118;Rank=1;Identity=0.3948;Positive=0.5034;Target=sp|O53945|MYCP5_MYCTU 15 585 +NC_000962.3 miniprot CDS 354504 355877 857 + 0 Parent=MP000118;Rank=1;Identity=0.3948;Target=sp|O53945|MYCP5_MYCTU 15 585 +##PAF sp|O69729|TCRY_MYCTU 475 132 475 - NC_000962.3 699930 697960 698934 333 1046 0 AS:i:282 ms:i:270 np:i:158 da:i:60 do:i:54 cg:Z:74M4I4M2I21M4I4M3I18M2I6M1D5M2F31M2D8M1I20M4I7M1D39M2I34M2I26M1D22M cs:Z::1*gaaD*gccV*gacI*cccV*gatT:1*gcgL*ctgS*cgcM:1*ctcN*accV:1*gacA*atcT*accM*gccL*gatQ*ctgM*gtcL*cggI*gaaI*ttgF*gtgG*accI*atcV*ctgT*ccgV:1*gtgA:2*atcA:1*gcgT*gtgT:1*gccG*tacI*ctgV*ctcI*agcI*cgcK*gccR:2*cggA:1*gtcL*gacR:1*atcV*cgcA*gcgQ*gcgT:1*caaS*acaE*ctgV*accV*accD*acgL:1*cacL*cccD*gacR*accG*gacE*gcgV*ccgK:3+RVPE:1*cccD*accA*gacN+PS*gacT:1*atcV*gctG*tggQ:1*gcaG*acgS*actA:2*accR:2*accD*cgaH*ctgI*caaA*cggA:2+SARQ:1*cacS:1*caaT+CVR:15*ctgA*ctgI*accR+GY:3*gaaT*ctgQ:1-tgc*gccI:1*ccaD:2-cc*gacE*cagA*ctgV*agcA*gccH:1*ctgM*cgcS*tccR*gcgV*ctcA*gaaS:2*cgcE:1*ctcI*agcT*ggaR:1*gccV*gacE*caaD:2*accL:3*gccL:1-cgcccc*gaaS*tccG*cacR:1*tccL*gccE*aaaR*gcgG+P:1*ccgD*atcM*actS*cccR:1*ctgA*cacV*gagD*agcA:1*gccS*cgcD*ttcA*gccH*gctV*actA:1*gcgP:1+HQWA*atcL*accD*acaL*cgcP*gcgP:2-gac*ctgV*ttcV*gtcI*tcgP*atcG:1*ccgA*gacA*cacR:1*cgcH*cgaQ*atcV*ctcV:1*gccN*gtgL:1*gacA:2*atcR*accV:1*gggT*gacG*ggtP*gaaG*atcT*gctI:2*gcgT*cacR*gccL*cgcS*gacT:1*gcaP+TH:1*gacV*atcL*ggcQ:1*cgcI:1*cacN:3*ttcI*gccP*gacA*cacA*tttL*cttQ*cccS*gtcE*gccV:1*gacE:2*accA:1*gccG:2*gccS:1*ggcS*ggtR*cgcQ+AG*ggcS*agcT:7*gccS:1*ctcV*accV*accK*accA:1*ggcN:1*catT*gccI*aacT*gccV*accS*aacS*cacS:1-gac:1*gggY*gccT:1*ctcF*cgcA*atcV*accR:2*acaL*ccgD*cggG*ccgW*cccQ*ttcP*cacL:1*gagS*cttS:2 +NC_000962.3 miniprot mRNA 697961 698934 270 - . ID=MP000119;Rank=1;Identity=0.3184;Positive=0.4532;Frameshift=1;Target=sp|O69729|TCRY_MYCTU 133 475 +NC_000962.3 miniprot CDS 697961 698934 270 - 0 Parent=MP000119;Rank=1;Identity=0.3184;Frameshift=1;Target=sp|O69729|TCRY_MYCTU 133 475 +##PAF sp|P0DMM4|Y572A_MYCTU 55 0 55 - NC_000962.3 699930 665436 665601 165 165 0 AS:i:312 ms:i:312 np:i:55 da:i:0 do:i:0 cg:Z:55M cs:Z::55 +NC_000962.3 miniprot mRNA 665434 665601 312 - . ID=MP000120;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P0DMM4|Y572A_MYCTU 1 55 +NC_000962.3 miniprot CDS 665437 665601 312 - 0 Parent=MP000120;Rank=1;Identity=1.0000;Target=sp|P0DMM4|Y572A_MYCTU 1 55 +NC_000962.3 miniprot stop_codon 665434 665436 0 - 0 Parent=MP000120;Rank=1 +##PAF tr|P95215|P95215_MYCTU 151 0 151 - NC_000962.3 699930 310296 310749 453 453 0 AS:i:758 ms:i:758 np:i:151 da:i:0 do:i:0 cg:Z:151M cs:Z::151 +NC_000962.3 miniprot mRNA 310294 310749 758 - . ID=MP000121;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95215|P95215_MYCTU 1 151 +NC_000962.3 miniprot CDS 310297 310749 758 - 0 Parent=MP000121;Rank=1;Identity=1.0000;Target=tr|P95215|P95215_MYCTU 1 151 +NC_000962.3 miniprot stop_codon 310294 310296 0 - 0 Parent=MP000121;Rank=1 +##PAF tr|P96845|P96845_MYCTU 319 197 319 - NC_000962.3 699930 478589 478970 108 381 0 AS:i:128 ms:i:128 np:i:63 da:i:0 do:i:21 cg:Z:53M5D69M cs:Z:*atgV:2*gccG*aggQ*tcgA*gccL*tggL*cagE*tgcA:1*ctcV*gacN:2*agaK:7*ccgA:1*gccG*ggcS*ttcY:1*ctgA*accI*cagK*gccH:2*gtcA:1*atgV*gccH*gtgI*gaaA*ctgI*cacE*aagL*ggtA*cagC*ctgP:1*tcgV*ttgY*catG*ctgA*gggA-cgcctcaaagacagg:1*ggcS:1*cgcE:1*gatR*cagD:2*ttcA*ggcA:1*ctcA*aacA*aacA*accS*cggE*gaaA:2*aaaL*atcA*tgcA:1*accW:1*cgaL*acaQ*ataT*ctgH:1*ggcA*aacI:1*ataF*tcgT*ctgC:1*tacH*ccgD*gtcL*atcS*cggL*cacW*atgL*gtcL*aacR*ctgV*gagQ*tcgA*gtgL*ctcH*accS*tacA*gagW:3*gagQ*atgE:1*cagR*ctgR*gtgR*ctcV*ggtL*cagE:1*ttcL +NC_000962.3 miniprot mRNA 478590 478970 128 - . ID=MP000122;Rank=1;Identity=0.2835;Positive=0.4961;Target=tr|P96845|P96845_MYCTU 198 319 +NC_000962.3 miniprot CDS 478590 478970 128 - 0 Parent=MP000122;Rank=1;Identity=0.2835;Target=tr|P96845|P96845_MYCTU 198 319 +##PAF sp|P9WG17|Y072_MYCTU 349 0 349 + NC_000962.3 699930 80623 81670 1047 1047 0 AS:i:1717 ms:i:1717 np:i:349 da:i:0 do:i:0 cg:Z:349M cs:Z::349 +NC_000962.3 miniprot mRNA 80624 81673 1717 + . ID=MP000123;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WG17|Y072_MYCTU 1 349 +NC_000962.3 miniprot CDS 80624 81670 1717 + 0 Parent=MP000123;Rank=1;Identity=1.0000;Target=sp|P9WG17|Y072_MYCTU 1 349 +NC_000962.3 miniprot stop_codon 81671 81673 0 + 0 Parent=MP000123;Rank=1 +##PAF sp|P9WHK9|PYRE_MYCTU 179 0 179 - NC_000962.3 699930 457843 458380 534 537 0 AS:i:882 ms:i:882 np:i:179 da:i:-1 do:i:0 cg:Z:179M cs:Z:*gtgM:178 +NC_000962.3 miniprot mRNA 457841 458380 882 - . ID=MP000124;Rank=1;Identity=0.9944;Positive=1.0000;Target=sp|P9WHK9|PYRE_MYCTU 1 179 +NC_000962.3 miniprot CDS 457844 458380 882 - 0 Parent=MP000124;Rank=1;Identity=0.9944;Target=sp|P9WHK9|PYRE_MYCTU 1 179 +NC_000962.3 miniprot stop_codon 457841 457843 0 - 0 Parent=MP000124;Rank=1 +##PAF sp|P9WHW5|PSTP_MYCTU 514 0 514 - NC_000962.3 699930 21639 23181 1539 1542 0 AS:i:2619 ms:i:2619 np:i:514 da:i:-1 do:i:0 cg:Z:514M cs:Z:*gtgM:513 +NC_000962.3 miniprot mRNA 21637 23181 2619 - . ID=MP000125;Rank=1;Identity=0.9981;Positive=1.0000;Target=sp|P9WHW5|PSTP_MYCTU 1 514 +NC_000962.3 miniprot CDS 21640 23181 2619 - 0 Parent=MP000125;Rank=1;Identity=0.9981;Target=sp|P9WHW5|PSTP_MYCTU 1 514 +NC_000962.3 miniprot stop_codon 21637 21639 0 - 0 Parent=MP000125;Rank=1 +##PAF sp|P9WHX5|PPE63_MYCTU 479 3 402 - NC_000962.3 699930 407536 434673 471 1221 0 AS:i:497 ms:i:544 np:i:201 da:i:6 do:i:1584 cg:Z:168M3I8M1144U15M7I13M3I17M1I84M3D4M4D12M1D2M24823N29M2I30M cs:Z::1*gcgL*gtgT:1*cccS:2*atcV:4*ctgM:1*gtgA:1*gccG:1*ttgP*gcgG*ccgS*atgL*ctgS*gacA:6*ggaE:2*gacA:2*ggtW*tcgL:5*tcgE*gcgS:1*acgC*gcgS:3*ggtD*tccR*tcgW:1*ctgQ:1*gcgP*gcgS:1*acgR*gcgM:1*acgA*ggaA*gcgQ:2*cccR*tatH*ctgT:3*agcA:3*gcgT:2*cagE*cagG:2*accS:1*accA*cggQ*ctgT*gcgM:1*gccL:1*ttcY:3*ctgF:7*atcL*atcV*tcgA:5*ttcV*gtgA*tcgW:1*gtgA*gtcG:2*ctgV*ctgF:3*gccT:5*accA:2*gccI:9*gcgV:2*tttL*ggcN:3*gggV:3*gccV*gtcG*tcgA*gcgR:1*acaR:1*ttcW*ggcQ:1+LLH*gcgE:2*accR*gtgR*gcgL:2*gE~gt1141ag-cg*gaaH*acgS*tcgD*gtgS:1*tcaN:1*tccE:2*gcgN*gcaP*accS:1*gcaT+TTRITVP*gccG*aaaA*acaS*tctP*tggV*gcaH:3*tcgL*gcaL*gctP*tcaF+IGR*ataL*tcgL:1*gtgA*gaaR*acaY*tcgA:1*tatL*tcaN*atgT*tcgA*gttI*ccgG*gaaT*gccN:1+F*gaaP*actG:2*tcgP*gatE*ccgV*gaaV*accS*tcgY*ggaP*tctA:1*acaI*tcgG:2*gaaS*acgG:1*gcgL*actG*acaA*acgV*tcgD:1*tcgN*ggaQ*acgS*cggI:1*actI*tcaG*accQ*aagQ*gctM:1*ccaH*acaN*ccgE*gcaI*acaL*acaA*acaA*tcgT*ggtA:1*ccaG*acaQ:1*gcaV:1*acaV*acaA*tcgG*gcaL:1*ggcM*tgtG*ccgS*gcgM*acaV*accI*agcD:1*gctE*tcaL*ataA*ttgY:2*gctI*ggaD*actP*cggN:2*gcaP*acaS*gcgS:1*tgtL*tcaT*attF-cgggcacca*ataV*acgE:2-tcttcaacgcgg*gcaG:2*acgR*tcgG*gcaL*tcgA:2*cggY*gcaL:1-gga*actV:1~gt24823ag*tcaT*gtcT*catI*gatP*gcgI*atcA*gctG*cagY*atcT:4*cacP*cacE*cacS*gagQ*gtcY*gaaN:2*ctgV*ttaV*cgcY:2*ctcY:2+WA*tcgD:1*gtgP*tcgD*gcgR*gagP*ctaW*gcgN:1*cgaL*ctgA*gccG*gaaA*cacN*gggA:1*cgcM*gacG*gagA*cggA*ctgY*gcgF*gacH*atcD:2*cggA:3 +NC_000962.3 miniprot mRNA 407537 434673 544 - . ID=MP000126;Rank=1;Identity=0.3857;Positive=0.4939;Target=sp|P9WHX5|PPE63_MYCTU 4 402 +NC_000962.3 miniprot CDS 434145 434673 465 - 0 Parent=MP000126;Rank=1;Identity=0.5611;Target=sp|P9WHX5|PPE63_MYCTU 4 182 +NC_000962.3 miniprot CDS 432537 433003 38 - 2 Parent=MP000126;Rank=1;Identity=0.2289;Target=sp|P9WHX5|PPE63_MYCTU 183 341 +NC_000962.3 miniprot CDS 407537 407713 41 - 0 Parent=MP000126;Rank=1;Identity=0.2951;Target=sp|P9WHX5|PPE63_MYCTU 342 402 +##PAF sp|P9WJP3|MENC_MYCTU 326 0 326 + NC_000962.3 699930 644489 645467 975 978 0 AS:i:1633 ms:i:1633 np:i:326 da:i:-1 do:i:0 cg:Z:326M cs:Z:*gtgM:325 +NC_000962.3 miniprot mRNA 644490 645470 1633 + . ID=MP000127;Rank=1;Identity=0.9969;Positive=1.0000;Target=sp|P9WJP3|MENC_MYCTU 1 326 +NC_000962.3 miniprot CDS 644490 645467 1633 + 0 Parent=MP000127;Rank=1;Identity=0.9969;Target=sp|P9WJP3|MENC_MYCTU 1 326 +NC_000962.3 miniprot stop_codon 645468 645470 0 + 0 Parent=MP000127;Rank=1 +##PAF sp|P9WJT9|MMPLB_MYCTU 966 0 966 - NC_000962.3 699930 238394 241292 2898 2898 0 AS:i:4902 ms:i:4902 np:i:966 da:i:0 do:i:0 cg:Z:966M cs:Z::966 +NC_000962.3 miniprot mRNA 238392 241292 4902 - . ID=MP000128;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJT9|MMPLB_MYCTU 1 966 +NC_000962.3 miniprot CDS 238395 241292 4902 - 0 Parent=MP000128;Rank=1;Identity=1.0000;Target=sp|P9WJT9|MMPLB_MYCTU 1 966 +NC_000962.3 miniprot stop_codon 238392 238394 0 - 0 Parent=MP000128;Rank=1 +##PAF sp|P9WQ41|MBTM_MYCTU 521 30 512 + NC_000962.3 699930 484078 485680 453 1632 0 AS:i:416 ms:i:416 np:i:227 da:i:36 do:i:51 cg:Z:21M4D71M4D61M5D33M1D41M1D7M1D81M18D3M4I35M19D4M2I46M3I14M1I9M3D4M6D42M cs:Z::1*atgH*acgP:1*agtP*caaE*ttaV*tatH*tctG*cgcL*gtcA*accE*gccS:1*tctA:1*tatW:1*ataL*agtD*tatH-ggccggcatgct:2*cgaP*aggA*accA*gcaV*gcgG*ataL*tcaV*gctG*ccgE*caaP*ggtT*ctgV*gacE*tatL:2*ggaA*tttI*ctaQ:2*ctgW*tgcL:2*tggA*acgA*ccgV*gttS*ccgI:2*gaaG:1*ctgV*ggcR*agcG*ctaA*cgcN:1*aagQ:1*actW*ggaA*ctgD:1*gtaT:1*gacT*tgtR*gccF*gccL*gacG*gtcI*gtgG*ctgV*acgR:1*tcgV*caaL*gccS*gaaQ*acgG*cggS*gtcY*aggL:1*acgR*ataL-gctacacatggg*gcgR:2*actD:1*ccgA*gtcG*ataV*gcgT*ttgI*gatG*acaD:1*gacS*gagT*ccaA*tccA*ggaH*gatT:1*tgtR*gatS*ctcA*gatT*tctP*caaV*ctaA:1*gacE*tggG*agtP*tcgA*tatV:2*tatG:1*tcgA:3*gccG*aacA:2*ggtT*gtgA*gttI:2*atgP*cgtG*aacA:1*acgL*gaaS:1*gtcL*gacR*caaG*attL-atccgtaactatttt*cgcN*catQ*gagR*ggcV:1*gcgT*ccgD*aggA*ttgA*cccT*agcD*tcgV*gtcG*gttC:11*atgA*gttF*ggcV:1*tttS*attA*ccgA:1-ttt*gtcA:1*tgtA:1*gttL*atcW:1*acgA*agcP*ccaT*gagT:2*atcT*cgtA*aagS:1*gccF:2*atgL*caaS*ctgW:1*gctS*aaaD*cacS*cagG:1*ccaT*tttM*tcgT:6*ttcY*gatN:1-gcc*gtcI*gctG:1*actY*tccA*gaaR*gagR-gac*atgV*gcgS*gggE*ctgV:3*cacA*gtaL*aatR*acaV*ataT*atcL:2*gcgG:1*cagP:1*cagD*ccaC*aatD*acaG*ataL:1*aaaR:1*ctcA*cgcE*cggA*ttcM*cgtA:1*tacF*aatG*ttgF*atgD*cccA*gcaG:2*aagL:4*atgL:2*gcgS*gtgT*gttC*tacA*ctgV*gcgT*acgV*acgP*aagV*gcgP:1*tcaI*cctG*ccaL*acgL*tcaA*accD*gagR*ttcV*gatI*gctD*gatG:1*ttgG:1*cgaH*ggcK:2*gagV:1*agtG-actttcgaaactgagcgtgcaacgcgtttaatacgctaccacagcgacgacaag*gaaN:1*ttgI+PGME*cttV:2*gtcS*gatC*ccgG:1*tcgQ*aatA*atcA*gagG*ctcN*ggaA*ccgS*ggaR*cgtE:4*tggE:1*cacR:1*aagA*aatS*gtgM*tctM*accA:2*cacL*aatG*gcaQ*gacQ-gacgcgctcaatcgagataagttccaggccagcatccgggaggcctctgcgggaacg:1*aggI*tcgD:1+DD:1*cttF*cgcA:5*ttcY*ataL*gtaG*ggaA*gatG*gagG*ttcL*tacV*atcV*gtcC:2*atgA:1*gatE*ctcV:1*atcS*caaI*gacA:1*gtaR:1*catI*tatF:1*gatT*gatE*atcV:1*actL*acgV*gtcA*aagA*gagQ*tttV*accR:1+VRE:1*cggA:1*gcgV:1*tttL*tcaG*gtaT*tccG:1*gacR*gggS*gtgT*gagR+P*catG:2*attV:3*gtaF:1-actgagcat:3*aaaE-gtgactattatggatttc*tcgA*acgN*atcA*aaaR*aggA*ctgE*gtcL*gtaI*tcgQ*gcgR*ttgV*tcgA*aaaS*ttaE*catC:1*ctgI*catV*gtaP*acaS:1*tttV*cttV*ctgF:1*ccgS:2*gcgS:2*aagR:1*accS:3*attL*agcR:1*gcgL:1 +NC_000962.3 miniprot mRNA 484079 485680 416 + . ID=MP000129;Rank=1;Identity=0.2776;Positive=0.4173;Target=sp|P9WQ41|MBTM_MYCTU 31 512 +NC_000962.3 miniprot CDS 484079 485680 416 + 0 Parent=MP000129;Rank=1;Identity=0.2776;Target=sp|P9WQ41|MBTM_MYCTU 31 512 +##PAF tr|Q6MX34|Q6MX34_MYCTU 565 0 565 + NC_000962.3 699930 602818 604513 1695 1695 0 AS:i:2891 ms:i:2891 np:i:565 da:i:0 do:i:0 cg:Z:565M cs:Z::565 +NC_000962.3 miniprot mRNA 602819 604516 2891 + . ID=MP000130;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q6MX34|Q6MX34_MYCTU 1 565 +NC_000962.3 miniprot CDS 602819 604513 2891 + 0 Parent=MP000130;Rank=1;Identity=1.0000;Target=tr|Q6MX34|Q6MX34_MYCTU 1 565 +NC_000962.3 miniprot stop_codon 604514 604516 0 + 0 Parent=MP000130;Rank=1 +##PAF tr|L0T6I4|L0T6I4_MYCTU 244 0 244 - NC_000962.3 699930 466674 467406 729 732 0 AS:i:1245 ms:i:1245 np:i:244 da:i:135 do:i:0 cg:Z:244M cs:Z:*gtgM:243 +NC_000962.3 miniprot mRNA 466672 467406 1245 - . ID=MP000131;Rank=1;Identity=0.9959;Positive=1.0000;Target=tr|L0T6I4|L0T6I4_MYCTU 1 244 +NC_000962.3 miniprot CDS 466675 467406 1245 - 0 Parent=MP000131;Rank=1;Identity=0.9959;Target=tr|L0T6I4|L0T6I4_MYCTU 1 244 +NC_000962.3 miniprot stop_codon 466672 466674 0 - 0 Parent=MP000131;Rank=1 +##PAF tr|L7N6A1|L7N6A1_MYCTU 532 0 532 + NC_000962.3 699930 131381 150708 957 1665 0 AS:i:1430 ms:i:1467 np:i:364 da:i:0 do:i:285 cg:Z:94M9D30M2D21M1I24M3D55M1D19M1I15M5I19M17722N25M5I7M4D12M1D34M3I50M1D54M5I27M2D26M cs:Z::2*cttF*ttgV:1*acaA*tcaA:1*gcgE*acgV*gtgM:5*catD:2*ggtN:3*gcgS*ctcI:1*acaA:1*aacS:4*gctG:2*acgM*gcgG*ctaI*tcgL*gtcA:8*ctgA:1*gcaS:3*gagG*gcgS*tacH:2*gagG:2*gcgT:4*gcaL*ctgA:1*ttcY:1*gacN:3*cagR:3*atgA:2*gttG*tgcS:2*gccS:2*acaA:2-gcaactccgctgcaggctctgcagact:3*aacT*gtcL:1*accN*gtgA*gtcI:5*gcaT:5*atcL:5*aacD:1*ttaG:1-aacacc:2*gacN:7*ttcY:7*tccA:1*gggD+T*gtgA*gatN*cagP*gccN:5*gcaS:8*tccA:2*gtcA:1*gggA-ccggggata:1*ggcT*agtG:6*gccN:2*ctgW:1*ttcY:8*ggtA:1*attL:2*accA:1*gacG*ggtV*gggS:1*ggcA:1*gccG*ggcA:1*aacG:1*atcA:2*tttW:1*agcH:2*accA:2*atgA:2-gtc*ggcS*ggcA*atgS:1*ggtA*gtcP:1*aacA:2*aacA*gcgG:1*aacD:2*accR*gccG:1+L:1*ttcY:1*cacD:8*atcN:2+NGVTG*gccV*gacH:2*ctcN:2*ggcA:2*aatA*ggcA*cggG*ttcL*atgI:4~gt17722ag:3*gccD:2*ccgN*gccG:2*atcS*ggcN*catT:1*gggA:6*tccA:1*gcgG:1+ALIGN:2*gccD:4-ggatggctgtgg:4*gtcH:1*ggaN:5-gtc:3*gtgG:3*cacA:5*gccH*gccV:2*tggI:1*gccN:2*ggcN:2*aatA:4*gccG*gatN*gccD:1+SST*atcL*gtcA*agcD*ggtA:1*gacS:2*ctcA:1*ggtA:3*ggtN:2*tggL*ctcF:2*gacN:2*gccV:2*cacR:2*caaN:1*gcaG*atcF*ggcS*ctcS*ggcA:1*ggcT*gccS:5*cagI:4-cgc:1*ctgI*tggG:1*actL*ggcI:1*gccS:2*cacG:2*caaD:2*ggtN*accG:1*ggcQ*ccaA:1*ctgT:2*cagN:2*atgD:1*gccG:3*gccN*ggtA*gggR:3*aacD:2*gccR:2*gacN:2*gtcE:1*gcgG*tccD:1+PPGVK:1*gtcD*gccG:1*gtaN:2*gccN:4*atgV*ctgV:2*cacN:2*gccN:5*gacF*agcG-agtttc*gctI*aatP*ggcV*gcgG*gccS:5*gccS*ggaR:1*cacV:3*aatT*ggcP:1*tccA*ggcN:1*cacA*ggcD:1 +NC_000962.3 miniprot mRNA 131382 150708 1467 + . ID=MP000132;Rank=1;Identity=0.5748;Positive=0.6559;Target=tr|L7N6A1|L7N6A1_MYCTU 1 532 +NC_000962.3 miniprot CDS 131382 132257 828 + 0 Parent=MP000132;Rank=1;Identity=0.5920;Target=tr|L7N6A1|L7N6A1_MYCTU 1 284 +NC_000962.3 miniprot CDS 149980 150708 639 + 0 Parent=MP000132;Rank=1;Identity=0.5547;Target=tr|L7N6A1|L7N6A1_MYCTU 285 532 +##PAF tr|L7N6B9|L7N6B9_MYCTU 434 0 434 + NC_000962.3 699930 613037 614339 1302 1302 0 AS:i:2198 ms:i:2198 np:i:434 da:i:0 do:i:0 cg:Z:434M cs:Z::434 +NC_000962.3 miniprot mRNA 613038 614342 2198 + . ID=MP000133;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N6B9|L7N6B9_MYCTU 1 434 +NC_000962.3 miniprot CDS 613038 614339 2198 + 0 Parent=MP000133;Rank=1;Identity=1.0000;Target=tr|L7N6B9|L7N6B9_MYCTU 1 434 +NC_000962.3 miniprot stop_codon 614340 614342 0 + 0 Parent=MP000133;Rank=1 +##PAF tr|O07430|O07430_MYCTU 691 0 691 + NC_000962.3 699930 216268 218341 2073 2073 0 AS:i:3600 ms:i:3600 np:i:691 da:i:0 do:i:0 cg:Z:691M cs:Z::691 +NC_000962.3 miniprot mRNA 216269 218344 3600 + . ID=MP000134;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07430|O07430_MYCTU 1 691 +NC_000962.3 miniprot CDS 216269 218341 3600 + 0 Parent=MP000134;Rank=1;Identity=1.0000;Target=tr|O07430|O07430_MYCTU 1 691 +NC_000962.3 miniprot stop_codon 218342 218344 0 + 0 Parent=MP000134;Rank=1 +##PAF tr|O53398|O53398_MYCTU 301 0 193 - NC_000962.3 699930 573249 573801 204 579 0 AS:i:247 ms:i:247 np:i:102 da:i:0 do:i:201 cg:Z:52M3I7M2I13M4I112M cs:Z::1*acgA*acaR*atcQ*ggcR*accF:1*aagD*cgaQ:1*gccV*gtgL*gtcI:12*agaK*accA*cttF:1*gccR*cagE:1*tttA*cacV:1*gtcA*gcgL*gtgA:3*gcgE*gacG*cggA*atcL*accR*gcgR*ctgV:1*aacR*cagE:1+EAA:2*accR:1*attM:2+PL:2*actS*gacS*gacS*gccE*gccS:1*gaaR:1*ttgM*gccV*cgcA+DVVG*gcgE*ctgF*agcG:1*gtgI:2*ctgV*gtcF:4*ggcV*gccS*aagL*gggV*cttG*cagP*ttcV*gtcD:1*gatE*gccT*gatF:1*gagD*cacD*tggT:1*tggE:1*tggL*gacE*accI*aacD*gtaY:3*ctgV:2*accV:1*gcgE*ctgV:2*aagI*ctgM*atcK*gacQ*tccQ*ggcR*gacS:1*ctgR:1*gtcM*accN*gtcM*accS:1*atcV*gccV*gcgG*atcR*gagK*gtgA*tacF*gacA*ggcR*ggcF:3*accS*gctS:1*aagM:2*cagI*ggcA*gcgG*ctgF*catS*cgcD*acgA:2*ggcQ:2*ctgR:1*aagS*ccgG*gtcI*cggA*ctcV*accS*gagV:1*gctH:1*ggtA*gcgL*gtcT*gagQ:1 +NC_000962.3 miniprot mRNA 573250 573801 247 - . ID=MP000135;Rank=1;Identity=0.3523;Positive=0.5285;Target=tr|O53398|O53398_MYCTU 1 193 +NC_000962.3 miniprot CDS 573250 573801 247 - 0 Parent=MP000135;Rank=1;Identity=0.3523;Target=tr|O53398|O53398_MYCTU 1 193 +##PAF tr|O53611|O53611_MYCTU 745 0 745 - NC_000962.3 699930 72276 74511 2235 2235 0 AS:i:3844 ms:i:3844 np:i:745 da:i:0 do:i:0 cg:Z:745M cs:Z::745 +NC_000962.3 miniprot mRNA 72274 74511 3844 - . ID=MP000136;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53611|O53611_MYCTU 1 745 +NC_000962.3 miniprot CDS 72277 74511 3844 - 0 Parent=MP000136;Rank=1;Identity=1.0000;Target=tr|O53611|O53611_MYCTU 1 745 +NC_000962.3 miniprot stop_codon 72274 72276 0 - 0 Parent=MP000136;Rank=1 +##PAF tr|O53670|O53670_MYCTU 646 0 646 - NC_000962.3 699930 298865 300803 1938 1938 0 AS:i:3397 ms:i:3397 np:i:646 da:i:0 do:i:0 cg:Z:646M cs:Z::646 +NC_000962.3 miniprot mRNA 298863 300803 3397 - . ID=MP000137;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53670|O53670_MYCTU 1 646 +NC_000962.3 miniprot CDS 298866 300803 3397 - 0 Parent=MP000137;Rank=1;Identity=1.0000;Target=tr|O53670|O53670_MYCTU 1 646 +NC_000962.3 miniprot stop_codon 298863 298865 0 - 0 Parent=MP000137;Rank=1 +##PAF sp|O53778|VPB26_MYCTU 71 0 71 + NC_000962.3 699930 677709 677922 210 213 0 AS:i:349 ms:i:349 np:i:71 da:i:-1 do:i:0 cg:Z:71M cs:Z:*gtgM:70 +NC_000962.3 miniprot mRNA 677710 677925 349 + . ID=MP000138;Rank=1;Identity=0.9859;Positive=1.0000;Target=sp|O53778|VPB26_MYCTU 1 71 +NC_000962.3 miniprot CDS 677710 677922 349 + 0 Parent=MP000138;Rank=1;Identity=0.9859;Target=sp|O53778|VPB26_MYCTU 1 71 +NC_000962.3 miniprot stop_codon 677923 677925 0 + 0 Parent=MP000138;Rank=1 +##PAF tr|O86361|O86361_MYCTU 440 0 440 + NC_000962.3 699930 292170 293490 1317 1320 0 AS:i:2210 ms:i:2210 np:i:440 da:i:-1 do:i:0 cg:Z:440M cs:Z:*gtgM:439 +NC_000962.3 miniprot mRNA 292171 293493 2210 + . ID=MP000139;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O86361|O86361_MYCTU 1 440 +NC_000962.3 miniprot CDS 292171 293490 2210 + 0 Parent=MP000139;Rank=1;Identity=0.9977;Target=tr|O86361|O86361_MYCTU 1 440 +NC_000962.3 miniprot stop_codon 293491 293493 0 + 0 Parent=MP000139;Rank=1 +##PAF tr|P96812|P96812_MYCTU 201 0 201 - NC_000962.3 699930 162646 163249 600 603 0 AS:i:999 ms:i:999 np:i:201 da:i:-1 do:i:0 cg:Z:201M cs:Z:*gtgM:200 +NC_000962.3 miniprot mRNA 162644 163249 999 - . ID=MP000140;Rank=1;Identity=0.9950;Positive=1.0000;Target=tr|P96812|P96812_MYCTU 1 201 +NC_000962.3 miniprot CDS 162647 163249 999 - 0 Parent=MP000140;Rank=1;Identity=0.9950;Target=tr|P96812|P96812_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 162644 162646 0 - 0 Parent=MP000140;Rank=1 +##PAF tr|P96821|P96821_MYCTU 280 0 280 + NC_000962.3 699930 170283 171123 837 840 0 AS:i:1440 ms:i:1440 np:i:280 da:i:-1 do:i:0 cg:Z:280M cs:Z:*gtgM:279 +NC_000962.3 miniprot mRNA 170284 171126 1440 + . ID=MP000141;Rank=1;Identity=0.9964;Positive=1.0000;Target=tr|P96821|P96821_MYCTU 1 280 +NC_000962.3 miniprot CDS 170284 171123 1440 + 0 Parent=MP000141;Rank=1;Identity=0.9964;Target=tr|P96821|P96821_MYCTU 1 280 +NC_000962.3 miniprot stop_codon 171124 171126 0 + 0 Parent=MP000141;Rank=1 +##PAF sp|P9WGR5|Y484_MYCTU 251 0 251 - NC_000962.3 699930 573048 573801 753 753 0 AS:i:1247 ms:i:1247 np:i:251 da:i:0 do:i:0 cg:Z:251M cs:Z::251 +NC_000962.3 miniprot mRNA 573046 573801 1247 - . ID=MP000142;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGR5|Y484_MYCTU 1 251 +NC_000962.3 miniprot CDS 573049 573801 1247 - 0 Parent=MP000142;Rank=1;Identity=1.0000;Target=sp|P9WGR5|Y484_MYCTU 1 251 +NC_000962.3 miniprot stop_codon 573046 573048 0 - 0 Parent=MP000142;Rank=1 +##PAF sp|P9WH79|RL9_MYCTU 152 0 152 + NC_000962.3 699930 59408 59864 456 456 0 AS:i:751 ms:i:751 np:i:152 da:i:0 do:i:0 cg:Z:152M cs:Z::152 +NC_000962.3 miniprot mRNA 59409 59867 751 + . ID=MP000143;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WH79|RL9_MYCTU 1 152 +NC_000962.3 miniprot CDS 59409 59864 751 + 0 Parent=MP000143;Rank=1;Identity=1.0000;Target=sp|P9WH79|RL9_MYCTU 1 152 +NC_000962.3 miniprot stop_codon 59865 59867 0 + 0 Parent=MP000143;Rank=1 +##PAF sp|P9WIP9|HBHA_MYCTU 199 0 199 + NC_000962.3 699930 565796 566393 597 597 0 AS:i:950 ms:i:950 np:i:199 da:i:0 do:i:0 cg:Z:199M cs:Z::199 +NC_000962.3 miniprot mRNA 565797 566396 950 + . ID=MP000144;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WIP9|HBHA_MYCTU 1 199 +NC_000962.3 miniprot CDS 565797 566393 950 + 0 Parent=MP000144;Rank=1;Identity=1.0000;Target=sp|P9WIP9|HBHA_MYCTU 1 199 +NC_000962.3 miniprot stop_codon 566394 566396 0 + 0 Parent=MP000144;Rank=1 +##PAF sp|P9WK03|Y089_MYCTU 197 0 197 + NC_000962.3 699930 97757 98348 588 591 0 AS:i:1049 ms:i:1049 np:i:197 da:i:-1 do:i:0 cg:Z:197M cs:Z:*gtgM:196 +NC_000962.3 miniprot mRNA 97758 98351 1049 + . ID=MP000145;Rank=1;Identity=0.9949;Positive=1.0000;Target=sp|P9WK03|Y089_MYCTU 1 197 +NC_000962.3 miniprot CDS 97758 98348 1049 + 0 Parent=MP000145;Rank=1;Identity=0.9949;Target=sp|P9WK03|Y089_MYCTU 1 197 +NC_000962.3 miniprot stop_codon 98349 98351 0 + 0 Parent=MP000145;Rank=1 +##PAF sp|P9WMJ9|DNAK_MYCTU 625 0 625 + NC_000962.3 699930 419834 421709 1875 1875 0 AS:i:3129 ms:i:3129 np:i:625 da:i:0 do:i:0 cg:Z:625M cs:Z::625 +NC_000962.3 miniprot mRNA 419835 421712 3129 + . ID=MP000146;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMJ9|DNAK_MYCTU 1 625 +NC_000962.3 miniprot CDS 419835 421709 3129 + 0 Parent=MP000146;Rank=1;Identity=1.0000;Target=sp|P9WMJ9|DNAK_MYCTU 1 625 +NC_000962.3 miniprot stop_codon 421710 421712 0 + 0 Parent=MP000146;Rank=1 +##PAF sp|P9WNH1|BPOC_MYCTU 262 0 262 + NC_000962.3 699930 645466 646252 783 786 0 AS:i:1356 ms:i:1356 np:i:262 da:i:-1 do:i:0 cg:Z:262M cs:Z:*gtgM:261 +NC_000962.3 miniprot mRNA 645467 646255 1356 + . ID=MP000147;Rank=1;Identity=0.9962;Positive=1.0000;Target=sp|P9WNH1|BPOC_MYCTU 1 262 +NC_000962.3 miniprot CDS 645467 646252 1356 + 0 Parent=MP000147;Rank=1;Identity=0.9962;Target=sp|P9WNH1|BPOC_MYCTU 1 262 +NC_000962.3 miniprot stop_codon 646253 646255 0 + 0 Parent=MP000147;Rank=1 +##PAF sp|P9WPT5|CTPC_MYCTU 718 0 711 - NC_000962.3 699930 119935 122173 714 2325 0 AS:i:744 ms:i:733 np:i:361 da:i:-1 do:i:18 cg:Z:9M4D13M1I18M12I1M2I41M17D19M5D51M22D18M4D33M7I121M4D12M4D66M3D37M4I29M1D22M1I42M1I68M1I82M cs:Z:*gtgM*gcgT*gctL*ccaE:2*ggaS:2-gacctgcagtcg*gtgA*cggG:1*atcM:1*ctcV*gatK:1*ttgD*ggtW*atgV*tcaR:1+D*gcgS*gccR*tgtR:1*agcV*cgcA:2*acgE*aagA*ctcV*aacA:1*atcQ*cccN:3+VVHAYPRTGSVV*gcaV+WY:1*gtcP*aacR*ttcR:1*accD:1*gtcA:1*accV*atcL*gatA:1*gtgI*ggcK*atgG:2*gatH*gagV*ctgA*tgcA*gggE*gtgL*gtcI*gagP*aaaA*gccR*ggaA*tacP:1*gcgS:1*ccgE*cacI*accR*gagN:1*accD:2-gacaaacggacaaaggatcccgacggcgcccacgcccgcagactgctgcgg:1*ctgM*ctaV*gtcI*gcgG*gcgG:1*ttgA*ttcL*gtgA*ccgL:1*gctG*gacV*ctgR*tcgR*acgY*ttgV:1-gcgatcgtccccagc:2*gttP:1*ggcL*tggL:1*tacT*ataT*ttgG*acgR*gccT*ctgV:1*gctT*ccgG:1*gtgT*accI*tggF*gccT*gcaG*tggY:2*cacL*tcgR*gtcG:3*aacS*gcgL:1*cacS*cggG*acgK*acaA*tccG*atgT*gaaD*acgA:1*atcV:1*gtcA*gggA*atcT:2*gccS-accgcctggtcgctttcgtccgtcttcggcgatcagccgccacgggaaggctcgggaatctggcgg*gccL:2*aacR*agcE*gacN*tcgV*atcV*tacA:1*gagT:1*gcgL*gccW*ggtL*gtgL*accN*gtcI-ttcgttcttgcc:1*cgtE:1*tttL*gaaQ*gcaD*cgaL*gccT*aagL*tccR*aagR*gccT*ggcR*agcR:1*ctgI*cgtS*gcgE:1*gcgL*gagR*ctaG*ggcN*gccQ*aagD*aatT*gtgA*gcgW:1*ctgR:1*cccT:1+PSAGSDA*ggcA*gcgT:1*ctaI*gtgQ*ataV:1*gcgI*agcD*gaaT*ctcV*aagQ*aagI*cgcG*cagD*cgcE*ttcV:1*acgV*cggH*ccgE*gggH*gaaV*accA:1*gcaP*gctV:2*gtcE:4*agcE:1*gcgI*atcV*gatN*atgQ:2*atgI:3*gccN*aagL:2*cgtS*gccV*tatV*ccgV*gcgG*gccT*tcgR:1*gtgH*gggA:1*acgS:2*atgV*gacR:2*ctgV:1*atcV*gagR:1*accH:3*gccN*gatQ:1*cagT*ttcI*gccG*gcgR*atgI*gtcI*cgcS*ctcR:2*caaE:2*acgL*cagD*aagR:1*cgtP*gccI:1*cgcT*ctcV*gccG*gacE*cacN*atcF*gcgS*ggcR*gtgR:3*gtgT*gttS:1*gtcI*attV*gctS*ggaA*cttI:1-ggtgcggcctgg:1*gtcL*agcI*ggcT*gcaG*ggcD*gcgV*gatR:2*ttcM*tcgT-gtcacgctaggg*gtgM:1*gtgL:6*cttV:2*gcgS:4*atgI*atgS*gttA:1*tccI:1*cggN:2*cagR*ctaR:2*tttL:3*tacG*cggS*gcaH:2*accQ*atcA*cggG*agcR*atcV:1*accA*gtgI:11*cagR*ctgP*gcgV:1*agcT*accN*gtaI*acaV-atggcaggt*tcaA*ggcM*accH*agcK*gagD*cgaW*gatE*cgcP:1*gaaQ:2*ggcA*ctcY:2*gctS*gtcS:1*tcgI*gctH:1*gagR:1*gcgP*atgL:1*gcgE:1*atcV*gttI*gccR*gctS*tcgT*ccgE*gatE*ccgR+RISI*ggtP:1*gtcH*aacE*gggE*tttC*gtcE*gccV*gtcL*gcgV:1*tgcL:1*gtaM*tcgR*gggT*gaaW*gtcA*ggcD:1*catR*cacT*gttL*gagL*gtcL:1*aagS:2-tgg*attL*accL:1*accA*acgE*cccK*tgcV*cacR*gacV*gcgS*gctK*ctgK*gtgA:1*gcgE*cgcW*ctgV:1*ggcK*gaaL*tccR:1+Q*ggcA:2*gtcP*gttL*tttL*gtgL*tcgA:3*gtcT*gtcL*cgcV*gcaG*gccL*ctgI*acaS*atcL*gccR:1*accE*ctcV*aagR*gatP*tcaE:2*gccQ*gccV*gtcL*gctT*gcgK:2*agcA*cgcN:1*ctgI:1*acgR:1+V*ctgM:4*aatH*cggP*gccE*gccI:1*gacQ*gcgV:2*gcgD*cagE*gtcL:3*tccE*gctW*gtcR:1*gatE*atgV*ctgM:2*ggcD:1*gtcL*gacA*gtgA*atcV*caaR*cggE:1*cgcQ*gagD*gaaD:1*catY*accV:1*gccG:8*ggtA:3*gtgA*ggtA:2*ttgI:1*ttgI:1*atcM:1+L*cgtA:5*ctcV*ggtE*gcaT:2*atcV*attA:1*gtgA*cgcN:3*aatH*actR*gttL*ccgL*cagD*gcgV*ctgG:2*gccG*cgtE*gcaR*accA*atgV*cggD*acgV:2*atgQ:1*atgY*atcG*tggM*gcgS*ttcI*gggA*tacV:1*gtcA:1*gccG*atcL*ccgL:1*gccG:1*gccG:1*ctgA:1*aacS:1*ttgV*atcL:1*ggtA*gccI*gccL*atgH*gcgN*ttcA:2*tttV*ttcA:2*tcaA:2*ttgS:2 +NC_000962.3 miniprot mRNA 119936 122173 733 - . ID=MP000148;Rank=1;Identity=0.3071;Positive=0.4658;Target=sp|P9WPT5|CTPC_MYCTU 1 711 +NC_000962.3 miniprot CDS 119936 122173 733 - 0 Parent=MP000148;Rank=1;Identity=0.3071;Target=sp|P9WPT5|CTPC_MYCTU 1 711 +##PAF sp|P9WQM7|ANSP2_MYCTU 487 0 487 - NC_000962.3 699930 415504 416965 1461 1461 0 AS:i:2485 ms:i:2485 np:i:487 da:i:0 do:i:0 cg:Z:487M cs:Z::487 +NC_000962.3 miniprot mRNA 415502 416965 2485 - . ID=MP000149;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WQM7|ANSP2_MYCTU 1 487 +NC_000962.3 miniprot CDS 415505 416965 2485 - 0 Parent=MP000149;Rank=1;Identity=1.0000;Target=sp|P9WQM7|ANSP2_MYCTU 1 487 +NC_000962.3 miniprot stop_codon 415502 415504 0 - 0 Parent=MP000149;Rank=1 +##PAF sp|Q10891|Y095_MYCTU 98 0 98 - NC_000962.3 699930 104807 105101 294 294 0 AS:i:486 ms:i:486 np:i:98 da:i:0 do:i:0 cg:Z:98M cs:Z::98 +NC_000962.3 miniprot mRNA 104805 105101 486 - . ID=MP000150;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|Q10891|Y095_MYCTU 1 98 +NC_000962.3 miniprot CDS 104808 105101 486 - 0 Parent=MP000150;Rank=1;Identity=1.0000;Target=sp|Q10891|Y095_MYCTU 1 98 +NC_000962.3 miniprot stop_codon 104805 104807 0 - 0 Parent=MP000150;Rank=1 +##PAF tr|Q6MWY0|Q6MWY0_MYCTU 1538 0 1538 - NC_000962.3 699930 623870 675922 2346 4923 0 AS:i:2926 ms:i:3063 np:i:898 da:i:-1 do:i:159 cg:Z:8M1D27M1I59M6I77M3D28M3D55M4D20M693U1M1D23M12D21M2I27M2D66M5I114M7I7M5I11M10I29M5I7M10I11M3I32M1I9M7D10M2D11M7I25M2I47M4I44M6D49M3D77M6D83M6I20M1D8M5I18M2F9M40445V13M1D16M1D2M1F34M1D19M9I5M1D38M5175U3M1D27M12D30M6D30M3D5M3I10M1133N12M6D12M1I6M2G21M7I26M7D6M2G4M2D9M3I12M3D5M4D26M1D14M2D13M cs:Z:*agcM*gagV:2*ttcL*gtaM*atcV:1-acg:2*atgL*ctgV*accA*acgA:2*acgA:2*gcgT*aaaG:2*tcgQ*acgA:1*actS:3*accA:3*gcgG+P*gtgT*gcgT*aaaQ:2*cccA:1*tcaA*gccG:4*gtgA:1*gttI:12*accA*gtcL:2*caaR:5*gacE*cggQ:2*cagR*accS:1*tccT:2*gcgG:1*tcgA:1*gtgA*gccT:3*gtcA:1+ASPLQA*gttL:2*agtQ*ttgV:1*gccG:1*gtcI:5*gcgL*ctgW*ttcL:6*aacD:1*gccV*gacH:1*tccA:5*gccP:2*ccaA:2*atcL:1*tacW:10*ccaA:2*cgaV:2*gccP:6*atcF:4*aacS:2*gccS:2-gtgggtacc*accA:1*gggA:3*cacV:2*gcgS:4*tatN:7*tttA:2*gccT:2-gtcggcggc:6*accN:1*gggW:3*gtcA:2*gccS:4*ggcT:2*atcG*gccV:1*gtcG*acgS:1*acgG*tcgF*gccV*agcY*acaG*ccgN:2*tccA:1*accG*gctI:2*gccI:8*gccD*ggcA:1-gccggcggggtg:1*atgF:4*aacA:4*ggcA*gagA:1*gggL:2*ggcA:2*gL~gt690ag-gc*tcaN-ccc:2*aatD:1*ggtS*aacD:2*cctN:2*gccT:2*gagN:2*gccR:3*gcgL*ttgV-gccgcctcgggccagaacggcagccagggcgctggc:1*gacN:5*aacA:2*actV*cctG:1*aacD:2*cacK:1*gccG:2+DP*gcgS*ctcF*ggtA:2*ggtN:1*gtaA:2*gccN:5*gatN:8*cagA:1-ggaagc:1*tccL*accL*cccA:2*aacH:2*cccA:1*aacA:9*aacD:2*agaI:2*gatT:1*accN*ggcS*tttP*ggcL:1*accA:1*gcgG*tccA:2*aggN:2*gatH:8*gccT:5*aacA:1*agcH*aaaA:1*ctgS*cccT:1+ATGTA:1*ggcQ*aggP*ctcT:1*aacG*cccN:1*ctgT*gatN:2*accA:2*aacH:2*gccN:2*tccN:3*tggQ*gcgH:1*aacD:2*accV:2*gccK:2*accA:2*gtcS:2*actA:2*tccN:1*agcF:1*ggtA*gtcA*aacT*ggtL*tccG:1*gcgP:4*cacG*cccM:2*accN:2*gttK:2*accD:3*ggtA:4*gacA:1*gggA:1*gcaG*cccD*aacV*ggcT*gtcL:1*ggcV*agcN:2*cccA:2*gccD:2*gacN:2*accE*ggcV:4*aacK:2*cgcA:1+GVSANPA*attL*gacN:1*gccS*gacA:2+NGTAP:1*gcgS:1*gccG*cgcN:1*cagG*gatN:3+GATPTVAGEN:5*aagN:2*cgaH:2*accS*ggcV:1*ccgN:4*ccgG:2*acaG*accN:1*agcV*caaA:1*gccT+GLALN:5*agcN:1+GIGGNGGSAA:5*cccG:1*gacK:3+GGA:4*agcQ*gtgD:1*accS*aacA*aacS*ggcA*atcN:1*ggcA:3*aacQ:3*gccG:1*cccN*agcG:1*gccI:2*agtK:2+D:1*ggcF*tccA:2*ggtA*gcgK*accA:1-tcaagcagcagcattcatgtc:3*aacA:6-ggcgac*catV*gccG*ctcV*agcA:1*aacQ:1*gcgG:3+KGAIPAM*aacK:1*ggcA*aacT:1*ggcA*aacD:1*agcT*ctgA*cgcP*ggcT:3*gccD:2*cacN:4*ggcA*aatS+PT*gccV*agcA*aggG:1*atgN:5*accK:2*gccS:3*gccV:1*cagN*attG:9*ggaA*gacA:1*ggcQ*accA:1*agtT*gacP:1*aatP*cccT*ggaS*gccG*attD*accS:1*agcT+SGTD:2*cgcA:2*gacN:2*gtaA:2*caaA:2*agcT*gtcL:2*gacH:1*gctG*gacN:2*cggK:2*gccN:2*acgQ:2*acgI:1*ctgG*cggA:1*accE*accR:2*accD:1-gcgaccggcacattcgac:2*gcgP*gacN*ggtA*cacN:1*ggtA:2*ggcE*accN:2*gttS:2*accN:2*gccD:2*ggcA:10*ctgQ*tcgA*ccaA*acgG*ggcY*aacT*aacD:1*agcA*caaT:1*gccT:3-ggtggggcc:2*gccN:2*accD:2*accK*ggcA:4*agaA:1*gccE*cacN:1*actL*ctcN*ttcS*agcG*agcA*ctcM*gctL*ggcP*actG:3*ggcV:2*ggcP:4*accN:2*accN:2*gccN*ggcA:1*gccV:4*tccG*accK*ctgA:1*gcgT*accG*ggtS*gcgL:2*gcgL*gccD:1*cgcT*gccD:1*aacI*ggtT*ggcP*gtcN:2*agtN:1-ggccttggctccgccttt:1*cccN:2*accN:2*atgK:2*gccT*ggcA:1*accN*agcG*accS*gtcG*agcA:3*gacN:2*aggN:2*ttcS:1*ggcL*gacN:1*cttG:2*agtG*tccN:5*gacG*ggcA*gggL*cacN*ggtQ*ggcA*gacG*ggcF:1*aggG:1*gctG:1*gcgK:2*cgaN:2*gacN:2*aaaA:1*gccM*gacI*cccN:3*ttcG*ccgG*atcF*cctG:4*aagG:1*ggcA+VDVAAT:3*accA:2*accN*gcaG*cacG*ctcA:1*cccG*ctgF:1*atcS*atcT:1*caaL*tccG:1-cag:2*cagG*ttcA:1*agcG:2+GAGDF:1*gacS:1*cgcV:2*gccV:5*ggcD:5-ag*cttV*ctaG*gcaG:1*tccG*gaaG*tctQ*gccG:1*cgI~gc40442ag-c*gacG:1*cgtE*cggG:1*ggcT:2*tggN*agcG*gacG*cgtS:1-cgg:4*cggG*agcG*gacI*cgtS*cgtL*cggG:1*gacN:1*cgtG*cggL:1-gac:1*cgtN-t:3*gtcS*accE*ggcT*gtgG*gtcF:2*gtcA*gttG:1*ggcN*gtgG*gtcG*accY:1*gtgG*gtcP:2*gtcP*gttE:1*ggcN*gtgG*gtcG*accL:1*gtgG*gtcN:2-gtg*gtcA:2*gtcN*gtcG*gccG*gacV*gtgS*gtcT:2*gtcG*gtcD:3*gtgG:1*atgK+GGNGGDGGN:2*attL*ccaG:1-tgc*caaD*cccA:1*aacS:2*atgA*atgG*atcG*gggN*accG:4*gggD:2*acaG*acaA*ccgG:1*acgA*gccG:2*tccG:1*gcaN:1*gaaG*gccS*ggcS*gtcK*ccaS*cccT:1*ccgT*gG~gt5172ag-ta*cacN:2-att*gcgS:2*ctgA:2*gctN:1*acaG*ggcT:1*agcL:2*tgcA*gttG*gtcG*gtgA*ctcG:4*caaN*caaA*cctG*gcgV-cgacatccccaccgacgcgcgggccgacaagatcac:2*ggtV*gcgS*gctF:1*agaN*cgcA*ccgV*gacG*ccgG:1*gctG*ttaG*ccaN:1*cctG*gctN:2*cgcH*cggG:1*gctD*gacG*gttT*cgtT*gctG*aatG:1-ggccacgccgtggtgtgt:2*cttK:2*cgcN*gccG*tttS*ggcS*gctG:1*cgcA*tgcS*cggG*accS:1*gcgV*atcV*cggN*gcgV*cggT*cggA*gcgG*cgaH*gctG*gatG*cccN:1*actG*gcgN-tgacactgg*gctG:1*catN*gctG:1+NGS*gtgA:1*gttA:2*ggcQ:2*attA:1~gt1133ag:3*gtgG*cggN*gccG:1*cgtH*gccG:1*gctG:1-gaacagcgaaccgccggc:1*gccG*gccG*cccD*gccG:1*cgcN*gccG:1*cccN:2+N:1*gccG:1*ccgS*gcgT:1*ccV:2*cccL:2*cccG:1*gtcA*accG:1*gttG*gccG*aagN*cagG*ctgG:1*atcT*accS*gccS:2+GHGGSGG*gccS*gtcG*cccG*gccS*gtcG*gccT:1*atcG*gttG:4*gcgG*gccG*accN*accG*gccG:2*accA*gccG:1*gccG*gccS*gtcL-gccgtacaaccacccacccgc*accS:2*cccQ*accS:1*acG:3*cacQ-cgatgg:4*ggcW*cacQ:3+WLG:1*cgcQ:3*cacR*cgtW:2*accW*acgQ:1-ccgcaccac:1*cccC*cacR:2-ccccatcaccac:1*cacW:1*tgcW:3*agcQ*ggcR*cacR*cgcL:2*cacQ*cggW:1*cgcQ*cgtG:3*tacC:1*acaP*accW*accL-cac:2*cacR:1*cccG:1*cggQ*cccG:2*cacW:1*aggQ*aaaR-ggctga:1*cagF*cacQ*cgcQ:1*cacQ:1*cgaS:1*cgcW*cggQ:2 +NC_000962.3 miniprot mRNA 623871 675922 3063 - . ID=MP000151;Rank=1;Identity=0.4765;Positive=0.5472;Frameshift=4;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1 1538 +NC_000962.3 miniprot CDS 675067 675922 860 - 0 Parent=MP000151;Rank=1;Identity=0.6143;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1 281 +NC_000962.3 miniprot CDS 671974 674376 1874 - 2 Parent=MP000151;Rank=1;Identity=0.4962;Donor=GC;Frameshift=1;Target=tr|Q6MWY0|Q6MWY0_MYCTU 282 1113 +NC_000962.3 miniprot CDS 631136 631531 92 - 1 Parent=MP000151;Rank=1;Identity=0.3679;Frameshift=1;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1114 1250 +NC_000962.3 miniprot CDS 625581 625963 77 - 2 Parent=MP000151;Rank=1;Identity=0.2923;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1251 1359 +NC_000962.3 miniprot CDS 623871 624447 160 - 0 Parent=MP000151;Rank=1;Identity=0.3873;Frameshift=2;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1360 1538 +##PAF tr|I6WYT7|I6WYT7_MYCTU 508 0 508 + NC_000962.3 699930 690500 692024 1524 1524 0 AS:i:2629 ms:i:2629 np:i:508 da:i:0 do:i:0 cg:Z:508M cs:Z::508 +NC_000962.3 miniprot mRNA 690501 692027 2629 + . ID=MP000152;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6WYT7|I6WYT7_MYCTU 1 508 +NC_000962.3 miniprot CDS 690501 692024 2629 + 0 Parent=MP000152;Rank=1;Identity=1.0000;Target=tr|I6WYT7|I6WYT7_MYCTU 1 508 +NC_000962.3 miniprot stop_codon 692025 692027 0 + 0 Parent=MP000152;Rank=1 +##PAF tr|I6Y7N2|I6Y7N2_MYCTU 286 0 286 - NC_000962.3 699930 452296 453154 855 858 0 AS:i:1440 ms:i:1440 np:i:286 da:i:42 do:i:0 cg:Z:286M cs:Z:*gtgM:285 +NC_000962.3 miniprot mRNA 452294 453154 1440 - . ID=MP000153;Rank=1;Identity=0.9965;Positive=1.0000;Target=tr|I6Y7N2|I6Y7N2_MYCTU 1 286 +NC_000962.3 miniprot CDS 452297 453154 1440 - 0 Parent=MP000153;Rank=1;Identity=0.9965;Target=tr|I6Y7N2|I6Y7N2_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 452294 452296 0 - 0 Parent=MP000153;Rank=1 +##PAF tr|L0T6B3|L0T6B3_MYCTU 180 0 180 - NC_000962.3 699930 467461 468001 540 540 0 AS:i:909 ms:i:909 np:i:180 da:i:0 do:i:0 cg:Z:180M cs:Z::180 +NC_000962.3 miniprot mRNA 467459 468001 909 - . ID=MP000154;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T6B3|L0T6B3_MYCTU 1 180 +NC_000962.3 miniprot CDS 467462 468001 909 - 0 Parent=MP000154;Rank=1;Identity=1.0000;Target=tr|L0T6B3|L0T6B3_MYCTU 1 180 +NC_000962.3 miniprot stop_codon 467459 467461 0 - 0 Parent=MP000154;Rank=1 +##PAF tr|O06831|O06831_MYCTU 535 15 530 + NC_000962.3 699930 324680 326240 699 1569 0 AS:i:1060 ms:i:1060 np:i:315 da:i:114 do:i:6 cg:Z:23M1D5M2I125M5D9M1I12M1D18M1D320M cs:Z:*tcgA:1*gcgL:1*gggA*ctgP*gagL*ccgR:1*ctgD*aacR:1*gccL*gcgR*ctcI*gcaV:1*gatA*atcM:1*aagR*tggE:1-gaa*gtcM:1*atgF*ctgT*ccgA+GF*tcgA*cacG*aatA:3*gccC:1*aacD:1*gcgP*gccG*gtcL:3*gaaL:4*tttW*tccR*gaaQ:3*gccR*gcaG*cacN:1*gtgL:1*aatA*ggcA:1*ctgQ:1*aagL*ggtP*gtcA*cgcG*gccP*gggP*gacR*ggcV:1*gccG:1*ttgM*gcgC:4*tggG:2*atcD:1*aacL*tacL*gggA*gcgV*gccN:1*gtgI:2*cgcH:1*atcL:3*agcT*gagS:1*tccA:2*cagA*atcL*aaaA:2*tcgV*gacT:3*gccV*aagD*gtgT*atcV*atcV:2*gacE:1*tacF*accS*aagA*gccT:1*agcD*ttgR:1*cagL*ccaA*ccgE*ttgK*ggcP*aagQ*ctgA*cggT*gcgR*cttI*ggtV*gtcA*aatW*cccT:1*gacE:1-aagccgtcgggcagc*tccH:1*gaaL:1*ttgV*gccE*gagK:1*attV+A:2*agcA*agcG*accR*gcgR:1*gccE*ccgH*aagT*gcgG:1-cgc*cgtH*gcgG*tcgK*atcV:1*attL:12-aac:1*aacH*acaS*ccgG*ccgG*acgG*ctgI*gctG*ccgT*atcL*ggcK*ggcA:2*tcgD*cacR*gtgT:1*ttcW*aagR:1*ggcE:3*ctgV*ttgI*ccgV*tcgA:5*ctgW:1*tacF*atgS*cacQ*gccL*gcgV:2*atgS*ttcS:1*ggcA*tcgC:1*ctgI:1*ctgT:4*aagD:1*gcgE*ttgA*gtgT:1*gaaD*gacL:1*gaaD*aagR:1*aagH:2*tccG*atgL:6*ctgF*tcgD:2*ctcM:1*cagL*ctgP*gagA*aaaE*accI*gaaR*cccN*aagR*cccY:1*ttgG*tcgR:2*aagR*atcF*gtgA*ttcA*gtaA:3*caaR*ttgM*ggtR*gccP*gagD*ctgV*gccV*accI*cgcA*gcgF*ctgM*gggD*gacQ*ctcF:1*ccgD:4*atgN:1*ggcN*tcgA:2*gtcA*gcgG*ttcM*gccI*accA*atcT:1*ggcT:1*aagA:2*cagR*ttcT*aacA:1*agcD:1*gtgA:1*cccR*gtcP*gtcA*aagE:1*gtgT*acgE*gttI*aagR:3*gagQ*aacQ*ggcF*aatT:3*cagT:1*gccE:2*cggT:1*tttY:1*ggcR:1*gccD*ttcS*ccgQ:1*gagD:3*ggcS:1*ggtA*ggcA:1*cagD*atcF*atcH*gacA:1*ctgF*ttgM:7*ttcL:2*cgcN:1*ctgR:1*tatF:1*agcV:13*gtgI*tttY:1*gccI:3*gatK*ctgT*atcL*agcA*gggT:4*gtgA:3*gcgV:5*aagQ*gagQ*ttcY:1*gccQ:2*cgcA:4*aagL:3*gctV*gacS*ctcA*gacT*gagP*gacE:1*atcL:2*tacH:3*catN:2*cgcN:5*gagD*gtgI*atcA*ttcV:6*aacG*cccI:3*gtcI:1*aaaR*cgtT:2*cgcQ +NC_000962.3 miniprot mRNA 324681 326240 1060 + . ID=MP000155;Rank=1;Identity=0.4455;Positive=0.6023;Target=tr|O06831|O06831_MYCTU 16 530 +NC_000962.3 miniprot CDS 324681 326240 1060 + 0 Parent=MP000155;Rank=1;Identity=0.4455;Target=tr|O06831|O06831_MYCTU 16 530 +##PAF tr|O07230|O07230_MYCTU 302 0 302 + NC_000962.3 699930 365233 366139 906 906 0 AS:i:1561 ms:i:1561 np:i:302 da:i:0 do:i:0 cg:Z:302M cs:Z::302 +NC_000962.3 miniprot mRNA 365234 366142 1561 + . ID=MP000156;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07230|O07230_MYCTU 1 302 +NC_000962.3 miniprot CDS 365234 366139 1561 + 0 Parent=MP000156;Rank=1;Identity=1.0000;Target=tr|O07230|O07230_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 366140 366142 0 + 0 Parent=MP000156;Rank=1 +##PAF sp|O07436|LDT4_MYCTU 366 0 366 + NC_000962.3 699930 223563 224661 1098 1098 0 AS:i:1989 ms:i:1989 np:i:366 da:i:0 do:i:0 cg:Z:366M cs:Z::366 +NC_000962.3 miniprot mRNA 223564 224664 1989 + . ID=MP000157;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O07436|LDT4_MYCTU 1 366 +NC_000962.3 miniprot CDS 223564 224661 1989 + 0 Parent=MP000157;Rank=1;Identity=1.0000;Target=sp|O07436|LDT4_MYCTU 1 366 +NC_000962.3 miniprot stop_codon 224662 224664 0 + 0 Parent=MP000157;Rank=1 +##PAF sp|O07783|VAPC4_MYCTU 130 0 130 - NC_000962.3 699930 694841 695231 387 390 0 AS:i:644 ms:i:644 np:i:130 da:i:114 do:i:0 cg:Z:130M cs:Z:*gtgM:129 +NC_000962.3 miniprot mRNA 694839 695231 644 - . ID=MP000158;Rank=1;Identity=0.9923;Positive=1.0000;Target=sp|O07783|VAPC4_MYCTU 1 130 +NC_000962.3 miniprot CDS 694842 695231 644 - 0 Parent=MP000158;Rank=1;Identity=0.9923;Target=sp|O07783|VAPC4_MYCTU 1 130 +NC_000962.3 miniprot stop_codon 694839 694841 0 - 0 Parent=MP000158;Rank=1 +##PAF tr|O53547|O53547_MYCTU 317 0 265 - NC_000962.3 699930 290685 291450 294 819 0 AS:i:304 ms:i:289 np:i:130 da:i:48 do:i:18 cg:Z:54M3I1M3I16M3D11M2I8M1I46M4I7M4I52M1D16M1I7M4D29M cs:Z:*ttcM*tctK*gtcL*gggT*gcgE*gacS*gatN*tccR*acaS:1*ccgR*gccT*gacT*tggN*gagT*aagT*ccgD:1*gacS:4*attV:5*cgcA:1*atcL:1*gcaR*accA*atcE:1*gagL*gtgG*ttcL:2*gacL:2*cacT:2*gccV*atcN:2*gagA:1+ALD:1+SDV*gccV*gagD*aacE*ctgI*gccG*gaaA*accA:1*agcA*aagD*gtgA:1*ggcA*accK:1*ctgV-tggctcgac*gtcA*accV:1*gacG:1*gccI*gtcS*gacQ*aagR*atcA*agcT+AD:1*cacL:1*cgcA*gacS*cacA*cacV:1+L:1*aagG*gccL:2*ctgV:9*aagR*ctgM:1*gccF:2*gacS:1*gcgE*cgtE:4*ctgI:2*aatH:1*cttR*gccG*ccgH*ttgF*cggL:2*gagR*ggtN*ctgA*gtgA*ggcA+YWRD*aacK*ggcA*agcK*atcD*ggaA:2+GSVF:2*gtgL*atcV*gggN*ctgT:2*atcE:2*atcL*gccV:1*aacP*cgcV:2*accA:3*accA*accA:3*atgI*atcT*ggcA*atcL:1*cagL*gcgS*ctgA:1*cccR*ggcA:1*gccG*gcgR*aaaY:1*atcV*acgC*atcA:1*gccV*gtgI*gcaC:1*ggaR-ttc*atcA*gaaR:1*cagA:3*gccD*atcV*ccgF*ctgG:1*accA*cgtP*gagD:1+E*ggcA*cgcG*cggQ*ctgI*aacD*tcgP:1-ctgcagggcggg*cagS:1*gtcQ*gacH:1*gccV*gagS*gccL*atcV*gccQ*tacF*ttcL:4*tcaA*aacA*gcgE:1*accN:1*aacQ:1*attF*cgtI:1*tgcY:1 +NC_000962.3 miniprot mRNA 290686 291450 289 - . ID=MP000159;Rank=1;Identity=0.3590;Positive=0.4762;Target=tr|O53547|O53547_MYCTU 1 265 +NC_000962.3 miniprot CDS 290686 291450 289 - 0 Parent=MP000159;Rank=1;Identity=0.3590;Target=tr|O53547|O53547_MYCTU 1 265 +##PAF tr|O53639|O53639_MYCTU 582 0 582 - NC_000962.3 699930 142130 143876 1746 1746 0 AS:i:2975 ms:i:2975 np:i:582 da:i:0 do:i:0 cg:Z:582M cs:Z::582 +NC_000962.3 miniprot mRNA 142128 143876 2975 - . ID=MP000160;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53639|O53639_MYCTU 1 582 +NC_000962.3 miniprot CDS 142131 143876 2975 - 0 Parent=MP000160;Rank=1;Identity=1.0000;Target=tr|O53639|O53639_MYCTU 1 582 +NC_000962.3 miniprot stop_codon 142128 142130 0 - 0 Parent=MP000160;Rank=1 +##PAF tr|P95073|P95073_MYCTU 301 0 301 + NC_000962.3 699930 340994 379709 405 943 0 AS:i:502 ms:i:538 np:i:172 da:i:-1 do:i:60 cg:Z:50M1I30M2I108M1F19M37805V30M2D6M5I9M10D8M1D4M2I26M cs:Z:*tggM*gtgP:1*accA*gaaH*ggtD:1*agcN:2*atcL*acaA*acgS:3*tcgA:2*ctgT*tttM:2*acgA*gcgG:3*gaaA*gccT*cagK*aagD*tccP*gacR*ccgG:1*gtcI*gtcN:2*tatF:2*gcgP*ttcL*tgcV:4+L*ggtD*tcgF*tggF*gccT*gatK*gtgL*ctcI:2*aagE:1*cccD*gacI*cacA*aagT*ttgT*aagG*agcN*accL*gatS*ttcP:1*gagR*cacA*ttcQ*gtcA*aacM*ttcI*cagD:1+IA*gccV:6*gagD:3*cggT:1*gccT*gccD*gccG:1*gcgV:11*tcgA:8*gacA:2*acgV:1*tttY:1*ctgI:1*cgcQ:3*cttI:3*cgcT*gagT*gtgT:2*agcG*cacI:2*caaK:1*cgcT:1*ctgI:2*gagT*atcV*gccY*gtcI:3*gacA:3*caaA:2*cggQ*gacA*agtA:1*ttcL:1*gcgS*gctT:2*tcgT:2*attL:3*ctgM:5-g:1*ccgD:2*agcT:1*tatC:1*ccgT*gcaT*tcgA*atgP*cccN*tggS*ccgV*ggcL*gccR*gaaA:1*acR~gt37802ag-c:1*acaL*tcgP*gcgN*cgcL*cgcS:1*aatA*tcaL:1*actI:1*gttT*tcaQ*cccA*tgcG*acgY*accE*gctK*ggcW*acgR*gcgI*agtR:1*accA:2*actA*gcgW*gtgT-cgctgc:3*agcR:2+CIPAN:1*acgA:1*acgS:1*tcgT*gcaT:2-acaccatcgaagatccgacgttcgacgcca:2*tcgA*cgaG*ccaT*accL:2-cgc*aggQ:1*gccG:1+TY:1*accG*ggcA*cgcM*cccV*gcaC*agcP*cggF:1*accP*ggcH*atcT*cgcT:1*gtgI:1*ggaS*ccgA*tcaK:2*acgS:1*cctA*atcV*ccgV +NC_000962.3 miniprot mRNA 340995 379709 538 + . ID=MP000161;Rank=1;Identity=0.4295;Positive=0.5472;Frameshift=1;Target=tr|P95073|P95073_MYCTU 1 301 +NC_000962.3 miniprot CDS 340995 341618 482 + 0 Parent=MP000161;Rank=1;Identity=0.4968;Frameshift=1;Target=tr|P95073|P95073_MYCTU 1 210 +NC_000962.3 miniprot CDS 379421 379709 56 + 1 Parent=MP000161;Rank=1;Identity=0.2913;Target=tr|P95073|P95073_MYCTU 211 301 +##PAF tr|P95206|P95206_MYCTU 213 0 213 - NC_000962.3 699930 476681 477320 639 639 0 AS:i:1104 ms:i:1104 np:i:213 da:i:0 do:i:0 cg:Z:213M cs:Z::213 +NC_000962.3 miniprot mRNA 476679 477320 1104 - . ID=MP000162;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95206|P95206_MYCTU 1 213 +NC_000962.3 miniprot CDS 476682 477320 1104 - 0 Parent=MP000162;Rank=1;Identity=1.0000;Target=tr|P95206|P95206_MYCTU 1 213 +NC_000962.3 miniprot stop_codon 476679 476681 0 - 0 Parent=MP000162;Rank=1 +##PAF tr|P95210|P95210_MYCTU 123 0 123 + NC_000962.3 699930 479788 480157 369 369 0 AS:i:620 ms:i:620 np:i:123 da:i:0 do:i:0 cg:Z:123M cs:Z::123 +NC_000962.3 miniprot mRNA 479789 480160 620 + . ID=MP000163;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95210|P95210_MYCTU 1 123 +NC_000962.3 miniprot CDS 479789 480157 620 + 0 Parent=MP000163;Rank=1;Identity=1.0000;Target=tr|P95210|P95210_MYCTU 1 123 +NC_000962.3 miniprot stop_codon 480158 480160 0 + 0 Parent=MP000163;Rank=1 +##PAF tr|P96808|P96808_MYCTU 447 0 447 - NC_000962.3 699930 158317 159658 1341 1341 0 AS:i:2336 ms:i:2336 np:i:447 da:i:0 do:i:0 cg:Z:447M cs:Z::447 +NC_000962.3 miniprot mRNA 158315 159658 2336 - . ID=MP000164;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96808|P96808_MYCTU 1 447 +NC_000962.3 miniprot CDS 158318 159658 2336 - 0 Parent=MP000164;Rank=1;Identity=1.0000;Target=tr|P96808|P96808_MYCTU 1 447 +NC_000962.3 miniprot stop_codon 158315 158317 0 - 0 Parent=MP000164;Rank=1 +##PAF sp|P9WF85|VPC25_MYCTU 142 0 142 - NC_000962.3 699930 332710 333136 426 426 0 AS:i:753 ms:i:753 np:i:142 da:i:0 do:i:0 cg:Z:142M cs:Z::142 +NC_000962.3 miniprot mRNA 332708 333136 753 - . ID=MP000165;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WF85|VPC25_MYCTU 1 142 +NC_000962.3 miniprot CDS 332711 333136 753 - 0 Parent=MP000165;Rank=1;Identity=1.0000;Target=sp|P9WF85|VPC25_MYCTU 1 142 +NC_000962.3 miniprot stop_codon 332708 332710 0 - 0 Parent=MP000165;Rank=1 +##PAF sp|P9WFI9|Y293_MYCTU 302 0 302 + NC_000962.3 699930 340997 341903 903 906 0 AS:i:1570 ms:i:1570 np:i:302 da:i:-1 do:i:0 cg:Z:302M cs:Z:*gtgM:301 +NC_000962.3 miniprot mRNA 340998 341906 1570 + . ID=MP000166;Rank=1;Identity=0.9967;Positive=1.0000;Target=sp|P9WFI9|Y293_MYCTU 1 302 +NC_000962.3 miniprot CDS 340998 341903 1570 + 0 Parent=MP000166;Rank=1;Identity=0.9967;Target=sp|P9WFI9|Y293_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 341904 341906 0 + 0 Parent=MP000166;Rank=1 +##PAF sp|P9WFJ1|Y153_MYCTU 311 0 311 + NC_000962.3 699930 171232 172165 930 933 0 AS:i:1600 ms:i:1600 np:i:311 da:i:-1 do:i:0 cg:Z:311M cs:Z:*gtgM:310 +NC_000962.3 miniprot mRNA 171233 172168 1600 + . ID=MP000167;Rank=1;Identity=0.9968;Positive=1.0000;Target=sp|P9WFJ1|Y153_MYCTU 1 311 +NC_000962.3 miniprot CDS 171233 172165 1600 + 0 Parent=MP000167;Rank=1;Identity=0.9968;Target=sp|P9WFJ1|Y153_MYCTU 1 311 +NC_000962.3 miniprot stop_codon 172166 172168 0 + 0 Parent=MP000167;Rank=1 +##PAF sp|P9WMG5|MCE2R_MYCTU 240 0 240 + NC_000962.3 699930 684409 685129 720 720 0 AS:i:1190 ms:i:1190 np:i:240 da:i:0 do:i:0 cg:Z:240M cs:Z::240 +NC_000962.3 miniprot mRNA 684410 685132 1190 + . ID=MP000168;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMG5|MCE2R_MYCTU 1 240 +NC_000962.3 miniprot CDS 684410 685129 1190 + 0 Parent=MP000168;Rank=1;Identity=1.0000;Target=sp|P9WMG5|MCE2R_MYCTU 1 240 +NC_000962.3 miniprot stop_codon 685130 685132 0 + 0 Parent=MP000168;Rank=1 +##PAF tr|Q11064|Q11064_MYCTU 383 23 368 + NC_000962.3 699930 273165 274164 378 1092 0 AS:i:412 ms:i:412 np:i:181 da:i:111 do:i:111 cg:Z:23M1I71M6I11M1D8M4I32M6I23M7I7M6D21M6I7M12D82M1I29M cs:Z:*gccS*gtcL*gagT:1*atgI:2*tgcV:2*gtcL*ggcL:2*gtcG:2*gtcA:1*ttcY*cagT:2+K*cacY*tctT*agcH:1*gtgY*ggcW:1*cggL*ctgM*ttcS*ggcS:1*ttcM*gatE*ctgI*gcgG:1*gcgP*gtgI:2*gccV*gtgL:5*tggF:1*ggaP*cacW*gccV*gcaK*gcgS:1*cgaA*gatT*ctgG*cggG*tcaP*cacP:1*cgaS*accL*ggtS*ccgR:1*ctgA*cgaW*tcgH:2*gcgR:6*gtgT:1*gcgT:1*gtcL*gtcL*atcA*ctgY*tccL*ctgV*ctgY+HFRTAG:1*gacN*gcgP*gatG:1*gccT*agcW*ctgV*accG*gtgL*tggF-ctg*gccR:7+YTDG:1*gtgL*ccgG*ctgA*accF:1*accH*ggcQ:8*tccA:6*gcgL:3*gtcA:2*ttgY:1+LLVLVC*ggcR:2*attW*ccgQ*gtcP*ggtR*gccL*cgaL*gtgL*ccgA*gcgT*atcM:1*gcgG:1*gcgT*gcgM*ctcI:1*tggP:2+LILVHNT*ggcH:1*ctcM:1*ttgD*gacG:1-gggtcggggatcaacccg*ttgR*accL:1*ccgL:1*gcgT*ttcY*ttcL*tcgA:2*gccV*gcgG:2*ttgM:2*gagV*tggL:1+AMGVRC:1*agcA*ccgF:1*gggA*ttgI:1-catcggtgggcgcgccgccgcgtggcgatggcggtt*accL:1*ctgV*ctgI*ggtC:1*ctgF*gtgI*gcgV*gccS*tcgT:1*ttgI:2*ccgA*gagP*ggcT*ctgT*gttS:1*ggcT*acgA*gcgL:1*caaE*ttcA*gcgL:4*atgF*ggcY*tcgA*ctgV*gtaI:1*ttcV*gcgL*ctgA:4*gtgA:1*gacG*cggD*cccQ*gacG*acgW*tcgY*cacA*cggQ:2*ggcA:1*cccR*gcgP:2*accF:2*cgtE*tggI:2*ggcE*ctgI:1*atcL*tggI:2*gccV*gcgT*ctgM*gccE*atgI+A*gtgM*tttV*cccD:1*atcL:1*gcgY*ttcR*ccgV*tttY:1*gggS*cgaS:1*ccgV*acgN*gtgL*ctgC*gtgL*ttgV:2*atcV*ttcL*ggtT*ttcI*gcgP*atcL:1 +NC_000962.3 miniprot mRNA 273166 274164 412 + . ID=MP000169;Rank=1;Identity=0.3462;Positive=0.4973;Target=tr|Q11064|Q11064_MYCTU 24 368 +NC_000962.3 miniprot CDS 273166 274164 412 + 0 Parent=MP000169;Rank=1;Identity=0.3462;Target=tr|Q11064|Q11064_MYCTU 24 368 +##PAF tr|Q6MWX5|Q6MWX5_MYCTU 731 0 731 + NC_000962.3 699930 149532 363055 1296 2421 0 AS:i:1787 ms:i:1850 np:i:483 da:i:0 do:i:51 cg:Z:93M1I29M1D19M1I79M20D40M1I1M1I17M1I21M1I13M7I2M2I14M1I19M8I24M4I22M3I16M210895N12D17M2D12M324N18M3D48M1I12M2D4M6I26M3D5M2D33M6D26M6D2M1I16M3D35M15D20M1D9M cs:Z::4*agcI*gtaA*gccN:2*attM*gtgL*gtgA:9*ggaR:6*aatT:7*accI*gccQ:1*ctgA:8*gcgL:2*gcgS:3*tccG*ggcQ:12*gcgT*gcgI:2*cagD:4*acgA:1*gccT*ggtS:1*gctG*ggaN*gcaL:5*gccS*cagH+T:3*cagM*ctgV:1*gccN:7*gcgT:1*ctgF:6*aacD:2*gatN:1*gcgT-ccg*gggA*actE*gggN*cagP*gccD:1*gggQ*gctN:2*atcL:1*tacF:6+F*ggcT*tccQ*gggT*gcgT:2*cagV:3*gccN:2*ccgS:5*catN:2*tccA:2*gccG:2*tccA:5*gccL:2*cacN:4*tggY:4*gtcA:2*tccI:4*gtcT:1*gcaT:1*gtgG*gctH:2*cacA:5*gccR:1*gggW:3*gccT:2*ggcA-ggtggcaatggcgggaacggcgccgatgccaacatcgtcagcggtggagacggtggcctc:5*ggtD:4*tacF:7*cacT:2*caaN:1*gcaG*atcS:1*ctcF*ggcN*ggcS*ggcL*gccT*ggcS*ggcS*gacV:2*cagA:3+G:1+H*cgcA:2*tggF:1*actA:2*gccT:2*cacT:2*caaI:2+Q*ggtN:1*gggE*ggcT*ccaG:1*ctgA*cccA*ggtS*cagN*gcaG:1*atgA:1*gccG:3*gccG:2+Y:1*atcV:1*aacD:5*gacT:2*gtcA+GGKNSSG:2+TL*tccT:2*gtcT*gccG:1*gtaT:5*aacA:1+G*atgW:1*atcY:1*cacS:8*gacA*agcG*agtG*ttcL*gctN:1+AGGATGGT:1*gcgG*gccT:5*gccS:1*gggA*cacW:1*ttcY:4*tccA*ggcA:1*cacA:2+NGGN*gccN*gtcT*acgS:2*aacT*accG:1*atcV:1*ggcA*gccS:2*gtcT:2*gacN:1*aggG:2+GAG:10*gacN*cgcQ*gccT:1*gccG*ttgV~gt210895ag-gccggcggcgacggtgggctgttgttcggcaacggc:4*tccA:1*gcaG*cccN:1*cagG:6*gcgQ-gccggg*ttcL*ttcY:4*aacD:2*gacN:2~gc324ag:4*ggcN*ggtI*gacA:3*gccG:1*acgD*agtG:1*ggcA*atcA:1-atcgcgcaa*accH:5*gctS*ggcA*ggtR*gccL*ggcI:1*gacA:1*gcaG*cccH:2*aacD:2*aatA:2*agcN*gtcT*gagA*cacG*actR*ggcR:1*accD*ggcA*tccI*tctA*gcgG*agcT:2*aatD:1*gccG*accN:5+L*gtcL*ggtS*gcgG*cccN*ggcA:4*aacH:2-cacgtc*agcA:3+STATTT*gtcT*aacG:1*gccP*ggcP*gccT:1*ggcA*aaaT:5*accN:5*ccgT*ggcA:1*cacF*ggcT:1-agcgttcta:2*ccgG*gttI:1-gacagt:7*gacT:2*gccN*gggA*gttG*agcV:1*accL*gatS*atcV*gccG*ggcS:3*cgcL:5*catS:3-tggatcggcaacggcggc*gacG:2*gcgG:1*ggtS*gtcL*ggcF:1*gtcN:4*gcgG*gctV:2*atcT:2*cacN:2*gatS:1-ggctccgtaaatacccct:2+P*ggcA:1*gagV*gccG:1*gacN:5*ctgV:1*gggA*gacA:1-ggtgggcgc:1*ataL*ttcA:2*tttI:1*gccN:2*gccS:2*gccS:2*gtcA:2*gccN:2*gctT:1*gggD:1*ggcA:1*ggcN:6-attttcaatgccggtacccccggcgccgccggcacgggcggtgac:1*ggtA:3*accN*ggtA*gcgQ*gccL*ggcI:1*aaaN:2*gccN:2*agcG:2-gtc:2*gccG:5*gccT +NC_000962.3 miniprot mRNA 149533 363055 1850 + . ID=MP000170;Rank=1;Identity=0.5353;Positive=0.5985;Target=tr|Q6MWX5|Q6MWX5_MYCTU 1 731 +NC_000962.3 miniprot CDS 149533 150822 1178 + 0 Parent=MP000170;Rank=1;Identity=0.5770;Target=tr|Q6MWX5|Q6MWX5_MYCTU 1 440 +NC_000962.3 miniprot CDS 361718 361846 81 + 0 Parent=MP000170;Rank=1;Identity=0.4651;Donor=GC;Target=tr|Q6MWX5|Q6MWX5_MYCTU 441 469 +NC_000962.3 miniprot CDS 362171 363055 591 + 0 Parent=MP000170;Rank=1;Identity=0.4818;Target=tr|Q6MWX5|Q6MWX5_MYCTU 470 731 +##PAF tr|I6X8G2|I6X8G2_MYCTU 68 0 68 - NC_000962.3 699930 87800 88004 201 204 0 AS:i:337 ms:i:337 np:i:68 da:i:-1 do:i:0 cg:Z:68M cs:Z:*gtgM:67 +NC_000962.3 miniprot mRNA 87798 88004 337 - . ID=MP000171;Rank=1;Identity=0.9853;Positive=1.0000;Target=tr|I6X8G2|I6X8G2_MYCTU 1 68 +NC_000962.3 miniprot CDS 87801 88004 337 - 0 Parent=MP000171;Rank=1;Identity=0.9853;Target=tr|I6X8G2|I6X8G2_MYCTU 1 68 +NC_000962.3 miniprot stop_codon 87798 87800 0 - 0 Parent=MP000171;Rank=1 +##PAF tr|L0T643|L0T643_MYCTU 223 0 223 - NC_000962.3 699930 390582 391251 669 669 0 AS:i:1162 ms:i:1162 np:i:223 da:i:0 do:i:0 cg:Z:223M cs:Z::223 +NC_000962.3 miniprot mRNA 390580 391251 1162 - . ID=MP000172;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T643|L0T643_MYCTU 1 223 +NC_000962.3 miniprot CDS 390583 391251 1162 - 0 Parent=MP000172;Rank=1;Identity=1.0000;Target=tr|L0T643|L0T643_MYCTU 1 223 +NC_000962.3 miniprot stop_codon 390580 390582 0 - 0 Parent=MP000172;Rank=1 +##PAF tr|O07241|O07241_MYCTU 220 0 220 - NC_000962.3 699930 382881 383541 660 660 0 AS:i:1141 ms:i:1141 np:i:220 da:i:0 do:i:0 cg:Z:220M cs:Z::220 +NC_000962.3 miniprot mRNA 382879 383541 1141 - . ID=MP000173;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07241|O07241_MYCTU 1 220 +NC_000962.3 miniprot CDS 382882 383541 1141 - 0 Parent=MP000173;Rank=1;Identity=1.0000;Target=tr|O07241|O07241_MYCTU 1 220 +NC_000962.3 miniprot stop_codon 382879 382881 0 - 0 Parent=MP000173;Rank=1 +##PAF tr|O07246|O07246_MYCTU 220 0 220 + NC_000962.3 699930 387887 388547 657 660 0 AS:i:1131 ms:i:1131 np:i:220 da:i:-1 do:i:0 cg:Z:220M cs:Z:*gtgM:219 +NC_000962.3 miniprot mRNA 387888 388550 1131 + . ID=MP000174;Rank=1;Identity=0.9955;Positive=1.0000;Target=tr|O07246|O07246_MYCTU 1 220 +NC_000962.3 miniprot CDS 387888 388547 1131 + 0 Parent=MP000174;Rank=1;Identity=0.9955;Target=tr|O07246|O07246_MYCTU 1 220 +NC_000962.3 miniprot stop_codon 388548 388550 0 + 0 Parent=MP000174;Rank=1 +##PAF tr|O07253|O07253_MYCTU 208 0 208 - NC_000962.3 699930 394696 395320 624 624 0 AS:i:1080 ms:i:1080 np:i:208 da:i:0 do:i:0 cg:Z:208M cs:Z::208 +NC_000962.3 miniprot mRNA 394694 395320 1080 - . ID=MP000175;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07253|O07253_MYCTU 1 208 +NC_000962.3 miniprot CDS 394697 395320 1080 - 0 Parent=MP000175;Rank=1;Identity=1.0000;Target=tr|O07253|O07253_MYCTU 1 208 +NC_000962.3 miniprot stop_codon 394694 394696 0 - 0 Parent=MP000175;Rank=1 +##PAF tr|O07424|O07424_MYCTU 452 0 452 - NC_000962.3 699930 210894 212250 1356 1356 0 AS:i:2253 ms:i:2253 np:i:452 da:i:0 do:i:0 cg:Z:452M cs:Z::452 +NC_000962.3 miniprot mRNA 210892 212250 2253 - . ID=MP000176;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07424|O07424_MYCTU 1 452 +NC_000962.3 miniprot CDS 210895 212250 2253 - 0 Parent=MP000176;Rank=1;Identity=1.0000;Target=tr|O07424|O07424_MYCTU 1 452 +NC_000962.3 miniprot stop_codon 210892 210894 0 - 0 Parent=MP000176;Rank=1 +##PAF tr|O33360|O33360_MYCTU 503 0 503 + NC_000962.3 699930 606550 608059 1509 1509 0 AS:i:2661 ms:i:2661 np:i:503 da:i:0 do:i:0 cg:Z:503M cs:Z::503 +NC_000962.3 miniprot mRNA 606551 608062 2661 + . ID=MP000177;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot CDS 606551 608059 2661 + 0 Parent=MP000177;Rank=1;Identity=1.0000;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 608060 608062 0 + 0 Parent=MP000177;Rank=1 +##PAF tr|O33360|O33360_MYCTU 503 0 503 + NC_000962.3 699930 400191 401700 1506 1509 0 AS:i:2651 ms:i:2651 np:i:502 da:i:0 do:i:0 cg:Z:503M cs:Z::495*cccH:7 +NC_000962.3 miniprot mRNA 400192 401703 2651 + . ID=MP000178;Rank=2;Identity=0.9980;Positive=0.9980;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot CDS 400192 401700 2651 + 0 Parent=MP000178;Rank=2;Identity=0.9980;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 401701 401703 0 + 0 Parent=MP000178;Rank=2 +##PAF tr|O53546|O53546_MYCTU 254 0 254 + NC_000962.3 699930 196890 197652 492 762 0 AS:i:836 ms:i:836 np:i:198 da:i:-1 do:i:3 cg:Z:254M cs:Z:*gtcM*cgcI*gacQ:2*caaA*accV:1*ctgA*accR*ctcA:5*cgcE:1*tgtS*gtgM*ctgD:1*ggaA*aagR:1*ctgA:2*tggR:3*tggF:3*attL*ctgD:1*tgcT:1*ttcM*atcV*atgA:2*ggaS*tttL*ttaV:2*atcL*atgL:4*ctgF:3*ttgV*atcA:7*gccR*cagE*ttcI:4*atcL:2*tccA:1*gcgT:1*atcF:1*gcgT*gtcI:5*ctgV*acaV:9*tccA:19*gagR:7*cacQ:10*atgT:3*acgL:6*atcC*accA*gtcI:2*gtcS:2*tttY*ctcA:1*ggtS:1*tatF:2*aacG:1*tcgN*ggcP:2*tacF*cttI*gccN*acgG:2*ttgV*atcL:3*cccR:1*gtgL*gtcI*atcL:1*accE:3*gcaL*acgL:2*ctgV*atcM:12*cgtK:2*tccP:2*cttV:1*accN:7*ctgY*tgtA*gtgF:1*gccC:2*gccV*gtcI:2*atcV*ttgM:1*accA:4*ttcI*gggS*acgA*gggQ +NC_000962.3 miniprot mRNA 196891 197652 836 + . ID=MP000179;Rank=1;Identity=0.6457;Positive=0.7795;Target=tr|O53546|O53546_MYCTU 1 254 +NC_000962.3 miniprot CDS 196891 197652 836 + 0 Parent=MP000179;Rank=1;Identity=0.6457;Target=tr|O53546|O53546_MYCTU 1 254 +##PAF tr|O53708|O53708_MYCTU 799 0 799 - NC_000962.3 699930 449406 451803 2397 2397 0 AS:i:4180 ms:i:4180 np:i:799 da:i:0 do:i:0 cg:Z:799M cs:Z::799 +NC_000962.3 miniprot mRNA 449404 451803 4180 - . ID=MP000180;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53708|O53708_MYCTU 1 799 +NC_000962.3 miniprot CDS 449407 451803 4180 - 0 Parent=MP000180;Rank=1;Identity=1.0000;Target=tr|O53708|O53708_MYCTU 1 799 +NC_000962.3 miniprot stop_codon 449404 449406 0 - 0 Parent=MP000180;Rank=1 +##PAF tr|O53737|O53737_MYCTU 236 0 236 + NC_000962.3 699930 542141 542849 705 708 0 AS:i:1185 ms:i:1185 np:i:236 da:i:-1 do:i:0 cg:Z:236M cs:Z:*gtgM:235 +NC_000962.3 miniprot mRNA 542142 542852 1185 + . ID=MP000181;Rank=1;Identity=0.9958;Positive=1.0000;Target=tr|O53737|O53737_MYCTU 1 236 +NC_000962.3 miniprot CDS 542142 542849 1185 + 0 Parent=MP000181;Rank=1;Identity=0.9958;Target=tr|O53737|O53737_MYCTU 1 236 +NC_000962.3 miniprot stop_codon 542850 542852 0 + 0 Parent=MP000181;Rank=1 +##PAF tr|O53903|O53903_MYCTU 584 0 584 + NC_000962.3 699930 483967 485725 777 1773 0 AS:i:1207 ms:i:1207 np:i:353 da:i:-1 do:i:6 cg:Z:64M3D87M5I211M2D14M1D47M1D156M cs:Z:*ccaM*ctcV*ccaA*atgS:1*gttI*ataP*tccT*acgA:2*gacE:2*accS*acgV*actH:1*agcN*gacG*gaaA:1*tttI*gtgT*ttcY*atgI:2*gacE*acaQ*aaaD*accW*ggcA*gacG*caaV*attA*gacE*cgaT*atgL:6*tctR:1*gtcM*accL*gccN:1*tctA*gcgE*tatP:1*ataR*agtH*tatV:1*cggA*catT*gctG:2-cgaaggacc:1*gcgV:1*tcaL:4*ctgI*gacE:2*gcaV:6*tgcQ:2*tggR*acgI*ccgA:4*gaaV:1*ctgH*ggcA*agcG*ctaA*cgcH:1*aagE:2*ggaI*ctgS*gctV*gtaL*ctcS:1*tgtT*gccS*gccP*gacA:1*gtgI:4*caaG:1*gaaV*acgD*cggD:2*gccE*acgC*ataA*gctQ*acaP*catQ*gggP*gcgG*tctQ*gtaS*actA*acgP*ccgS*gtcI*ataV*gcgE:2*acaL:2*gagL*ccaD:1+RQRSR*ggaS*gatP*aacG*tgtA*gatR*ctcP*gatT*tctG*caaR*ctaD*tcaT*gacP*tggE*agtT*tcgA:9*gccR*aacT:1*cgtA:2*gttM*ttaV:1*atgN*cgtK:2*acgF*gaaA:1*gtcF*gacE:2*atcV*cgtA*aacD*tatF:1*cgcA*catP:3*gcgV*ccgV*aggP*ttgP*cccD*agcL*tcgT:13*atgL*gttL:1*ctcA*tttI*attM:1*ttgI*tttL*gtcA:1*tgtV:1*gttT*atcV:4*gagV*gcaG:1*atcL*cgtQ*aagR:4*atgI:4*aaaR*cacN*cagG*gcgR*ccaT*tttI:2*gcgG:5*gatE:3*gctR:3*gaaD*gagD:2*gcgD:4*ggcA*cacG:1*aatH:2*atcL:2*gcgS:1*cagR:1*cagH:1*aatA:1*ataL*accK*aaaR:1*ctcA*cgcE:2*cgtG*cccR*tacF:1*ttgF*atgA*cccA:2*gtcL*aagR:1*tcaA:6*gtgT:2*ctgI:2*acgR*aagN*gcgV*ggaN*tcaE:2*acgE*tcaI*accV*gagD:1*gatE*gctS*gatE*agcK:1*gctP*cgaA:1*cacQ:1-gagcta*agtI*actR*ttcC*gaaP*actS*gagG*cgtS*gcaG:1*cgtP:1*ataV*cgcS:1-cac*agcG*gacV*gacP*aagR*gaaS*ccgQ:1*cttV:6*tcgT*aatC:2*ctcC*ggaP*ccgQ:1*cgtS*atcV:4*attV*cacQ:1*aagG:2*tctA*accS:2*cacW*aatH*gcaK*gacP*gacE*gcgE*ctcS*aatK:1-gat*aagT:1*cagG:1*agcR:1*cggV*gagT*gccP:5*aggE*tcgA:7*ttgS:2*ataV*gtaS:1*gatG:1*ttcL*tacF:1*gtcI:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatA:5*actA:1*gtcI*aagQ:1*tttI:1*ggtS:2*gtcC:2*tttI*tcaA:1*tccP:1*gacH:1*gtgT:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagR*catG*gggD*cccS:1*aaaE*gtgD*actV*attA*atgD*gatR*ttcL*tcgR*acgI*atcV:2*ctgD:1*gtaA*tcgA:1*ttgI*tcgF*aaaD*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgS:2*gcgS*ctaI:1*aagI:6*agcR:2*gcaQ:1*gcaV*aagQ*cagL:1*ggaR*gcaR*aatR*aagE*ttgF*caaT:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483968 485725 1207 + . ID=MP000182;Rank=1;Identity=0.4382;Positive=0.5973;Target=tr|O53903|O53903_MYCTU 1 584 +NC_000962.3 miniprot CDS 483968 485725 1207 + 0 Parent=MP000182;Rank=1;Identity=0.4382;Target=tr|O53903|O53903_MYCTU 1 584 +##PAF sp|P71650|MAZF9_MYCTU 118 1 116 - NC_000962.3 699930 547037 547357 228 345 0 AS:i:311 ms:i:311 np:i:87 da:i:0 do:i:0 cg:Z:57M1G30M7I1M1G18M cs:Z::1*ctgR:15*gcgE:2*atgN*cggQ:4*attV:8*gccT:1*ataT:2*gacG:3*gtgI*ccgT:7*accI*gaaA:2*cY:6*ccgS:1*gcgT*agcT*ggtT:2*gccQ:2*tcgC:4*cagE:1*gttI*ggaR:1*gtcI:1*gcgT*caaE+RLLRPIG:1*cV:1*cctA:3*atcA*gaaQ:2*gatE:2*agaK:3*gcgD:1 +NC_000962.3 miniprot mRNA 547038 547357 311 - . ID=MP000183;Rank=1;Identity=0.6609;Positive=0.7565;Frameshift=2;Target=sp|P71650|MAZF9_MYCTU 2 116 +NC_000962.3 miniprot CDS 547038 547357 311 - 0 Parent=MP000183;Rank=1;Identity=0.6609;Frameshift=2;Target=sp|P71650|MAZF9_MYCTU 2 116 +##PAF sp|P71707|PBP1A_MYCTU 820 0 820 + NC_000962.3 699930 53236 55696 2457 2460 0 AS:i:4284 ms:i:4284 np:i:820 da:i:-1 do:i:0 cg:Z:820M cs:Z:*gtgM:819 +NC_000962.3 miniprot mRNA 53237 55699 4284 + . ID=MP000184;Rank=1;Identity=0.9988;Positive=1.0000;Target=sp|P71707|PBP1A_MYCTU 1 820 +NC_000962.3 miniprot CDS 53237 55696 4284 + 0 Parent=MP000184;Rank=1;Identity=0.9988;Target=sp|P71707|PBP1A_MYCTU 1 820 +NC_000962.3 miniprot stop_codon 55697 55699 0 + 0 Parent=MP000184;Rank=1 +##PAF tr|P95208|P95208_MYCTU 395 0 395 - NC_000962.3 699930 478568 479753 1185 1185 0 AS:i:2057 ms:i:2057 np:i:395 da:i:0 do:i:0 cg:Z:395M cs:Z::395 +NC_000962.3 miniprot mRNA 478566 479753 2057 - . ID=MP000185;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95208|P95208_MYCTU 1 395 +NC_000962.3 miniprot CDS 478569 479753 2057 - 0 Parent=MP000185;Rank=1;Identity=1.0000;Target=tr|P95208|P95208_MYCTU 1 395 +NC_000962.3 miniprot stop_codon 478566 478568 0 - 0 Parent=MP000185;Rank=1 +##PAF sp|P9WGD5|SSB_MYCTU 164 0 164 + NC_000962.3 699930 58585 59077 489 492 0 AS:i:843 ms:i:843 np:i:164 da:i:-1 do:i:0 cg:Z:164M cs:Z:*gtgM:163 +NC_000962.3 miniprot mRNA 58586 59080 843 + . ID=MP000186;Rank=1;Identity=0.9939;Positive=1.0000;Target=sp|P9WGD5|SSB_MYCTU 1 164 +NC_000962.3 miniprot CDS 58586 59077 843 + 0 Parent=MP000186;Rank=1;Identity=0.9939;Target=sp|P9WGD5|SSB_MYCTU 1 164 +NC_000962.3 miniprot stop_codon 59078 59080 0 + 0 Parent=MP000186;Rank=1 +##PAF sp|P9WI25|PPE19_MYCTU 396 0 396 - NC_000962.3 699930 466803 468004 474 1257 0 AS:i:513 ms:i:513 np:i:209 da:i:-1 do:i:129 cg:Z:164M1G40M1I8M5I3M7I16M1I47M4D6M1I27M3D5M2D16M3D7M2I14M11D11M1I13M cs:Z:*gtcM*atgV:13*atcM:1*tccA:4*aggA*cccS:1*atgV*caaA:2*gcaK*gccM:1*caaD*cggS*ctgV:1*aacS*gaaD:1*accF*gcgS*acgA:1*gctS*tccA*tacF*tccQ:2*attV*tccW:3*ggcT*gatG*gacS:1*ctgI:1*ccgS:2*ctgG*tcgL:1*gcgV:3*gtcS:6*aggS*gccV:2*gccG*tcgQ:2*cagL*gccT:3*gccV*gtgR*gccV:2*aacA:3*tcgT:2*gcgG*gcgL:4*acgP:3*gccE:2*cgcA*acaE*atgL*ctgM*tcaI:1*gtcI*cagA:2*gttL*tttL:8*actV*agtN:1*acgA*cacE:6*catQ:1*atcA*ttgA:2*gacF:3*ggcA*gccT*tcgA*gggA*gccT:1*tccT*cagE*tA*tgcL*gccL*gttP*cacF*ccgE*ccaD*ccgA*gcgP*accL*accI*agcT*gggN*gccP:1*tcgG:1*agtL*gacE*gccQ:1*gcgV*acaA*gcgV*gctE*cagE:1*gtaI*gtaD*ccgT:3*gcgN*accQ*gacL*gtgM*agcN*ctgN*ctaV:1+Q*accA:2*tccQ*ttcL*ctaA*ccgQ:1+TKSIW:3+QLSELWK:2*ccgS*aacP*cccH*atcL*gagS*gatP:1*gacS*gttN*ctcI:1*gccS*gcaM*gctL+N*gtaN*gccH:1*gcgS*gctM*ggcT*agtN*ttgS:3*gcgM:1*cagS*ctcT*ggcL*gagH*atcS*tacM*cgcL*cacK*gacG*gtgF*gtcA*gacP*gagA:1*caaA*aagQ:1*ccgV*catE*tgcT*ccaA:1*gaaQ*tccN*gacG*cagV*acaQ*cccA*gctM*gggS*gccS*gcgL:1*gacS-ggggatctccct*gagQ*gtcL:1*ggaS*cggS*gtcL+G*accS:1*ccgG*ccaL*cagG*ccgA*ccgG:3*ctcN*accL:1*tacR*tccA:1*aacS*atcV:1*ggaS:4*cacQ*agcA:1-aatcttccg*ccaA:1*gtgA*cgcN:1-gttgcg:1*atgV*ttcT:1*ggcA:1*actR*ccgA*atgL*tatP*atgL:1*gggS*agtL*tcgT*gacS-ggctcctac:1*ggcA*ctgQ*gcaT:1*gcgP:1+HM:1*gccG:1*accL*ggtP:1*gccG*ggtQ:1*gccT*gccN*cgcS:2-tccgcgccgaccccggctgcagccgccccggcc:1*gccF:2*gccV*ggcS*ccgN:1*gccL*accR*aggM+P:1*gccR:1*cagY*cagV*acgM:1*gcgR:4*gccG +NC_000962.3 miniprot mRNA 466804 468004 513 - . ID=MP000187;Rank=1;Identity=0.3771;Positive=0.4988;Frameshift=1;Target=sp|P9WI25|PPE19_MYCTU 1 396 +NC_000962.3 miniprot CDS 466804 468004 513 - 0 Parent=MP000187;Rank=1;Identity=0.3771;Frameshift=1;Target=sp|P9WI25|PPE19_MYCTU 1 396 +##PAF sp|P9WIH1|PE15_MYCTU 102 0 97 + NC_000962.3 699930 349623 349914 198 291 0 AS:i:323 ms:i:323 np:i:77 da:i:0 do:i:15 cg:Z:97M cs:Z::8*gggS:2*gcaG:4*gtgI:2*ctgV:9*agcA:3*gtgF:1*accA:2*gtgI:2*gcgG*gcgS:1*ccgS:2*ctgV*cagC*accN:1*gccV*gggE:2*gcaV*cagH:1*gtcS*gagQ:1*gcgV*gtcA*gtcM*accA:1*gaaQ:7*gccS:4*ggcA:6*ctgA:1*ggtR:2*gccL:3*acgS:1 +NC_000962.3 miniprot mRNA 349624 349914 323 + . ID=MP000188;Rank=1;Identity=0.6804;Positive=0.7938;Target=sp|P9WIH1|PE15_MYCTU 1 97 +NC_000962.3 miniprot CDS 349624 349914 323 + 0 Parent=MP000188;Rank=1;Identity=0.6804;Target=sp|P9WIH1|PE15_MYCTU 1 97 +##PAF sp|P9WJ41|VPB24_MYCTU 77 0 77 + NC_000962.3 699930 289103 289334 231 231 0 AS:i:407 ms:i:407 np:i:77 da:i:0 do:i:0 cg:Z:77M cs:Z::77 +NC_000962.3 miniprot mRNA 289104 289337 407 + . ID=MP000189;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJ41|VPB24_MYCTU 1 77 +NC_000962.3 miniprot CDS 289104 289334 407 + 0 Parent=MP000189;Rank=1;Identity=1.0000;Target=sp|P9WJ41|VPB24_MYCTU 1 77 +NC_000962.3 miniprot stop_codon 289335 289337 0 + 0 Parent=MP000189;Rank=1 +##PAF sp|P9WJC7|ESPG3_MYCTU 295 0 295 + NC_000962.3 699930 352148 353033 885 885 0 AS:i:1531 ms:i:1531 np:i:295 da:i:0 do:i:0 cg:Z:295M cs:Z::295 +NC_000962.3 miniprot mRNA 352149 353036 1531 + . ID=MP000190;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJC7|ESPG3_MYCTU 1 295 +NC_000962.3 miniprot CDS 352149 353033 1531 + 0 Parent=MP000190;Rank=1;Identity=1.0000;Target=sp|P9WJC7|ESPG3_MYCTU 1 295 +NC_000962.3 miniprot stop_codon 353034 353036 0 + 0 Parent=MP000190;Rank=1 +##PAF sp|P9WNX9|GABD1_MYCTU 457 0 457 - NC_000962.3 699930 279607 280978 1368 1371 0 AS:i:2337 ms:i:2337 np:i:457 da:i:162 do:i:0 cg:Z:457M cs:Z:*gtgM:456 +NC_000962.3 miniprot mRNA 279605 280978 2337 - . ID=MP000191;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WNX9|GABD1_MYCTU 1 457 +NC_000962.3 miniprot CDS 279608 280978 2337 - 0 Parent=MP000191;Rank=1;Identity=0.9978;Target=sp|P9WNX9|GABD1_MYCTU 1 457 +NC_000962.3 miniprot stop_codon 279605 279607 0 - 0 Parent=MP000191;Rank=1 +##PAF tr|Q6MX48|Q6MX48_MYCTU 963 0 963 - NC_000962.3 699930 372822 375711 2889 2889 0 AS:i:5124 ms:i:5124 np:i:963 da:i:0 do:i:0 cg:Z:963M cs:Z::963 +NC_000962.3 miniprot mRNA 372820 375711 5124 - . ID=MP000192;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q6MX48|Q6MX48_MYCTU 1 963 +NC_000962.3 miniprot CDS 372823 375711 5124 - 0 Parent=MP000192;Rank=1;Identity=1.0000;Target=tr|Q6MX48|Q6MX48_MYCTU 1 963 +NC_000962.3 miniprot stop_codon 372820 372822 0 - 0 Parent=MP000192;Rank=1 +##PAF sp|Q79FB3|PG47_MYCTU 525 0 525 - NC_000962.3 699930 334795 339073 1026 1641 0 AS:i:1537 ms:i:1580 np:i:381 da:i:0 do:i:1356 cg:Z:97M3I51M1D86M2D6M2670U13M4D13M3D18M1I37M1D14M1I17M1D12M1I17M6D8M4D72M1I24M3I29M cs:Z::9*gttF*atcL*gcgT:3*acgM:4*ctcI*gagG:1*agcT*atcV*gccS:2*aacS:3*gcgS:1*aacP:1*acaV:1*ctgI:9*acgI:7*gccM:9*gccV:2*cagS:3*gccQ:7*tccA:1*ggcA*ggcY*gcgS:2*gccS:5*accV*tcgT:1+LQQ:1*ctcV*gccD*ccgV:2*gagA*ttcP:1*ctgR*gcgS*aatA*accL:8*accA:2*gccK:4*gccQ*aatD:2*gacA:2*tggL:1*atcY:1*aacS:2*gccN:4*gcgL:2-gtc*aacS:1*gggQ*gccK:6*ggcA:2*atcF:9*gggA*aggS*gccN*agcQ*acgA:1*accN:5*gccN:3*gccG:1*atgL*ctgI*ttcW:1*gccT:2*gtcT:2*cccN:3*gcaT*gccT*gctF*ttcL*ggcD:1*accA:8*aacA:4*gccG*gacA:2*gtcA:2*gccV:3-accgac:1*ggcL*accG:3*gQ~gc2667ag-cc*ctcA*acgA:2*gccN:5*gctV:2-aacgccggcctg:4*gccG:1*gtcA:6-acgaacggc:1*gcaD*ctcT:2*gcgT:10*gccG*accP+G:2*gtcS:2*tccV:2*gccF:1*agcD*tccT:2*gccT:2*gccD:2*gctS:5*gccV:2*accA:6*gccG-gac:1*agcA*ttcA:2*gtcD:8+T*ctgV:2*gcaS:2*gaaA:2*agcA:2*cacV*agcA*ctgT:2-ggc:1*gacH:2*gccH:5*atgL:1+Y*gccG*ctcT:1*gccG:6*atcF:2*gacF:2*actD-ctcacggccggcggcata:2*gccD:2*gccI:2-aacgctgggctg:1*ttcV:4*tccA:2*gccS:2*ttcT:1*ttcT*gccL*gacS:2*caaR:2*cccA:6*gtcF*ttcY:7*aacA:2*gttE*ggcS*cagD*ggcN*ttcG*gccD:2*atcN:2*gctV:2*accK*cccA:2*atcV:1*aacE:5*aacD:3*agcT+I:1*gtgG*accK:2*aacS:2*atcN:2*accN*ggcA*gtgW:1*atcT:1*aatQ:5*agcN+AAF:1*gggK*attA:1*gcgT:1*aagS*gccV:4*gtcA*agcG:3*ctcE:1*ctaQ*gacN:1*ttcE:1*gctG*cccL*gcgL*agcP*accS +NC_000962.3 miniprot mRNA 334796 339073 1580 - . ID=MP000193;Rank=1;Identity=0.6252;Positive=0.6965;Target=sp|Q79FB3|PG47_MYCTU 1 525 +NC_000962.3 miniprot CDS 338344 339073 773 - 0 Parent=MP000193;Rank=1;Identity=0.6599;Donor=GC;Target=sp|Q79FB3|PG47_MYCTU 1 243 +NC_000962.3 miniprot CDS 334796 335676 807 - 2 Parent=MP000193;Rank=1;Identity=0.5967;Target=sp|Q79FB3|PG47_MYCTU 244 525 +##PAF tr|Q79FD4|Q79FD4_MYCTU 1660 0 1640 - NC_000962.3 699930 630995 675916 2607 5274 0 AS:i:3467 ms:i:3510 np:i:959 da:i:0 do:i:210 cg:Z:33M1I62M2I27M1D53M20I9M2I15M2D43M15I40M1I10M9I93M1I8M2I56M9I2M1D52M4D26M1I130M1D21M5D10M1D47M1D36M4I62M6D21M2I15M2I15M1D31M5D13M1D20M9D53M2D34M1I31M6D28M6I2M3I2M3I1M4I7M2I27M1D46M5I36M9D7M2D12M3I10M3D9M9D37986U24M7D4M1D11M11D22M1I11M2D8M4D5M1I20M2D19M7I10M2003U11M2D3M2D44M5I50M3D10M7D12M7D7M cs:Z::2*ttcY:7*ctgM*accA:3*acgF:3*aaaR:3*acgQ*atcV*actS:2*aacS*accA*gcaV:2+M*gcgP*gtgT*gcgT*aaaE:1*ctgV*cccA:1*tcaG:5*gtgA*gccG*gttI:4*ggcS*acgA:6*accA*gtcL:3*gtgA:1*acgA:3*cggQ:2*cagH:2*tccT:3*agcR*tcgW:1*gtgT:1*gccT:1*gcgI*gtcA:1*gttA*gaaA+AM*cagR*agtV*ttgV:1*gccG:7*gcgT:1*ttcL:6*aacD:2*gacH:1*tccT-ccc*gggA*accP:2*gccP:2*ccaA:2*atcL:1*tacF:6*gggA*tctA:2*ccaV:2*cgaV:9*atcF:1*aacI:2*aacA:5*gtgA:1*accA*accP:2+TGGTGGWLAGGGGVGGMGGA*gccG:2*cacA:5+NA*tggG:1*tatF:7*tttA:4-gcggtc:2*aacA:5*accN:2*ttgW:2*gtcH:5*gccV:2*aacV:1*atcA:2*gtcA*acgN:1*acgA*tcgT*gccP*agcG*acaQ*ccgD:1*ggaA*tccA:1*accV:1+GSDDGAGGDGLAGSD:2*gccD:2*atcA:2*aacV:2*gccN:2*gccR:2*gtgW:1*atgL:4*aacA:2*gccV:2*gagV:2*cccA:4*ggtA:1+G:2*agcG:2*cacG:2*aacG*ttgI+NGPAGISAA:1*gctG:2*caaG:6*aatA:2*gctN:2*accV:2*gtcA:2*cccA:2*ggcS*cacA:4*ctcY*ggcV:1*agcR*cacA:1*gccD:5*agcG:2*gacL:8*aacA:1*gctG*accN:1*acgG*tggS*ggtW*cacL*aacA*cttA:1*gccD:2*accA:2*aatH:2*aacD:2*gccL:10*gtcG:1+A:1*agcA*gcgR*catA:4+LA:1*cccG*ggcN*accD*accG*tccP*accV:6*gacK:2*aaaN:2*gacH:1*atcP*agcV*agcA:1*cagG*accH:1*gcgG:3*aggA:2*gacN:2*cagL:2*aatD:5*gccH:2*cgcD:1*gggA:2*ggtA+GYADMTAIF:2-ttt*ggaS:1*gaaG*gcgT:2*cgcE*cccD:2*gccN:2*accA:5*aacA:2*actA*cagH:5*accA:5*gccN:2*gatA:2*tccA:2*gctN:1*agcA*atcH:4-tccgctcccggg*gccV*gcaL*ggcV:1*cccD:5*aacD:2*cctA:2*gccR:2*gagD:5*ctcA+G*gcgG*ttgD:1*gccP*tcgA:1*cagR*aacA:4*gctV:8*aacA:2*actA:5*cacS:1*gccG*gccR:1*gcgD*ctcM*ggtA*gtcF*aacK*ggtD:1*gtaD:5*cacD:5*gtcA:2*gccK:2*cagA:2*agcA:1*tccA:1*cccE:1*gccV*aacT:2*cccT:1*aacA:1*cccV*accH:6*aacK:2*agaN:5*ggcV*tttA:1*cagA*accN:1*gcgG*tccK:2*aggA:2*gatN:5*aacD:5*gccD:2*aacS:1*agcA*aaaA:1*ctgA*cccN:1-ctg*ggcA*aggN*ctcV:1*aacE*cccD:1*ctgA:2*ggcT*accL*ggcS:1*aacQ*ggtP:1*gccE:1*ggaS*tccE-ggcggcgcctgggcg*ggcA:3*accQ:2*gccV:2-acc:2*gtcA:2*actA:2*tccD:1*agcG*gacA:1*gtcS*aacS*ggtA*tccL*agcG*gcgS:1*gcgG*gacN:1*cacG*cccR:1*ggcD*accA:1*ggaQ*gttA:2*accA:2*aaaA:2*gacA:2*gacA:2*gccS*gcaV-ccc*aacS:1*gtcD*gccG:1*agcP*caaG:1*cccK:5*gacA:2*accA:1*ggaA*gttS:2*aacG:2*cgcK:1*attA*gacS:3*ggcS:1*accE+AVGG:2*gccG*cgcK:1*cagG:3*gccV:2*gccV:2*aagD:2*cgaP:2*accD:2*ccgA:3*gggA:3*acaQ*accV:2*caaH:1*gccV:2*aacV:2*agcD:2*accL:2*gacA*cccG:1*gacN:2*aacD:1*gctG*aacH:2-gtgttcaccaacaacggc*atcD:2*aacD:2*aacD:2*aacD*gccP:1*cccA*agcG:1*gccL:2*agtL:2+DS*gccG*ggcN*tccG:1*ttcR*ggtA:1*accS:1*tcaV*agcD*agcA:1*attD:1+GP*gtcG*aacS:10*gacA*catQ:1-ctc:1*ggcV*aacA:1*gcgG:6*aacD:3*ggcA*agcG*ctgR*cgcV:1*agcD:5*cacN:2*aacD:1-ggcaatgccagcagg*ggcA*atgA:1*ggtA*gacN:1*ggaA*accN*ggtS:2*ggcP:1-aac*gccS*gggD*cagA*attL*ggcA*aacL:1*ggaQ*gcgP:5*gacQ:1*ggcD*accA:1*agtQ-gacggcaatcccggagccattaccggc*agcA:2*cgcA:2*gacA:2*gtaA:2*caaA:4*gccS:3*gctG*gacA:2*cggN:5*acgN:2*acgV:1*ctgA*cggS:1*accG*accA:2*accR:2*accN:1*acaI*ttcD*gacS*gctI:1-gcggac:1*cacT:2*aacA:2*accG:2*gttD:2*accA:2*gccV:2*ggcH:2*aacD:2*gccV:2*aaaA:1*ctgP:1*ccaG:1+V:1*aacS*aacH:1*agcT*caaG:1*gccV:5*gccL:5*accV:2*accA:2*gacN:2*agaI:1*gccI-cacggcactctcttcagc*agcT*ctcV*gctG:1*actA:2*actA:5*accD*ggcP:1*accA:2*accR:2*gccL:2*gccD*ggcS:1+NGTSAA*accN:1+VDA:1*accK+HGP:1+TGGD:1*gcgG*accV:1*gcgG*acaN:1+AK:2*ggcA*cgcA*gccG:1*aacD:2*gtcQ:2*agtD:2*cttN*ggcA*tccG*gccL:2*cccD:2*accA:2-atg*ggcD:2*ggcD:2*agcA*accA*gtcE*agcA*gccL:5*aggA:2*ttcA:2*gacK:1*cttG:2*agtG*tccD*ggtI:1*aatD:5*cacK:4*ttcA*aggH*accG:1+LGGLT*gggV:3*cgaN:2*gacA:2*aaaA:1*gccG*gacA*cccG:1*ggtA*ttaG*ttcG*ccgA*atcF*cctL:1*gctD:2*aagN:2*accA:2*accQ:2*accA-gcacacctcgggcccctggccatcatc:1*caaR*tccG:1*cagS:2-cagttc:1*agcG*cccG:1*gccV*gacG:1*cgcH:4+GDA:1*gcaM*ggcN:4*gccT:2-agcttctag*catQ*tctG*ccgG:1*ctgG*ccgA:3-cctgcccgggatgctccctattgctgc*gA~gt37983ag-cc*caaG*ttcW*ctgS*ggtP:2*cgtD:1*cggK*gcaG*cccF*gccD:1*tgcF*gctD*gctG*gacG*gttS*tgtG*ctgG:2*tcgG:1-cgggctgcgcggtggcggttg:4-gtg*cctG:3*atcT:1*cgcT:1*ggcD:2-gctgatcgccgtgcgggtgctggccagtgagca:2*gcgG:1*gacG:1*accL*attG*cgtG*cgcA:2*gccV*gacG:1*gatN*ctgG*gatV*cgcD:2*ggcD+I*cgaN*cggE*gtaT*tttT*cgcG:1*tgtD:2*gtgD:1-tatcgc*cctG*gttD:2*ggcY:1*gcaG:1-tgccactcgctt*cccG:4+N:1*cggG*agcA:1*gctG*actS:1*cggP*ctgA:1*tgtE*cttV*tctG*caaN*ctaR*cggG*gctV*cgtG*gctG:1-cgtgct*gccG:4*gttS:1*cgcG*cgcD*agaA*ttgG*gcgN*gccG*cgtG*cctL*gcgG:1*actD:1+FTYLADF*gccD:1*cgtE*gctP:2*gctD:2*cgcD*gG~gt2000ag-cg*accG*gtcD*gtcG:1*gcgW*acgG*gtcR*gtcP:1*gcgG*acgQ-gtcgtt:2*gtgF-gtcacc:1*gtgS*gtcT*ggcS:1*gtcA*gttH:1*ggcK*gtgA*gtcG*accF:1*gtgA*gtcP:2*gtcD*gttG:1*ggcD*gtgG*gtcG*accN:1*gtgG*gtcH:2*gtgD*gtcG*ggcN:1*gtcS*gtcF:2*gtgA*gtcG*accD:1*gtcG*gtcP:1+GNGGN:1*gcgG*gtgL:1*atgG*gtcA:1*attR*ccaD:1*tgcG*caaA:2*aacG*gggD:1*atgG*atgD*atcG:3*attG*ggcS*accG:1*gcaF:1*acaA*acaP:1*ggcP*acgR*gccS*ggcI*gctG*tccG:1*gcaD:1*gaaG*gccD:1*gtcG*ccaR*cccG*accG*ccgD:1-gaggtaccc:3*accA*acgG*ttcG*tgtL:1*gccS:1-atggtgccgccctggaatcca*gcgG:5*ggaE*ggcS:2*accS:1-gcctgctgttgcgtcggcaac:2*atgR*aacG*ttcD:2 +NC_000962.3 miniprot mRNA 630996 675916 3510 - . ID=MP000194;Rank=1;Identity=0.4943;Positive=0.5455;Target=tr|Q79FD4|Q79FD4_MYCTU 1 1640 +NC_000962.3 miniprot CDS 671941 675916 3344 - 0 Parent=MP000194;Rank=1;Identity=0.5337;Target=tr|Q79FD4|Q79FD4_MYCTU 1 1353 +NC_000962.3 miniprot CDS 633472 633957 81 - 2 Parent=MP000194;Rank=1;Identity=0.3275;Target=tr|Q79FD4|Q79FD4_MYCTU 1354 1497 +NC_000962.3 miniprot CDS 630996 631471 85 - 2 Parent=MP000194;Rank=1;Identity=0.3252;Target=tr|Q79FD4|Q79FD4_MYCTU 1498 1640 +##PAF sp|Q79FP3|PG26_MYCTU 491 0 491 - NC_000962.3 699930 672145 675916 870 1656 0 AS:i:1204 ms:i:1237 np:i:327 da:i:0 do:i:147 cg:Z:33M1I60M6I30M2D20M1I24M5I44M2193V37M3I43M2D3M10D20M1I11M13D13M4I11M10D9M4I47M1D6M12D28M10D11M1D15M cs:Z::2*ttcN:1*atcM*gcgV*acgV:1*gagG:2*accS*acgA:2*acgA:1*ttgV:1*aaaS:2*tcgA*acgA*atcL*actS:3*accG:3+P*gcgT*gtgT:1*aaaG:2*cccA:1*tcaG:5*gtgA:1*gttI:1*gcgS:2*ggcS*acgG*cacY:1*cagR*gaaD:2*accA*gtcL:3*gtgM:1*acgR:2*gacQ*cggQ:3*accA:1*tccT:1*gccS*gcgV*agcG:2*gtgA:4*gtcA:1+ASPLQA*gttL:2*agtQ*ttgV:3*gtcI:5*gcgT:1*ttcL:11*tccL:1-gggacc:2*gccN:2*ccaA:2*atcL:1*tacW:7*tctA:1+D:1*ccaA*ggaH*caaP*cgaN:2*gccN:2*gcgD:2*ctaM*atcF:4*aacA:4+YSPAA:1*gtgT:1*accA*accA:5*cacA:7*tatS:7*tttN:2*gccT:2*gtcS:1*ggcA*aacD:2*gccG:1*ggtL*accP*gccP*gggV*ttP~gt2190ag-c*aggA*ggcS*atgP:2*gacN:2*accG:1*ggcD:3*aacA:2*cagM*attF:1*aacT:5*aatT:5*accA:1*agtG*gacA:1+DSP:1*cccS:2*attN*accG*ggcA*agcR:2*cgcD:2*gacN:1*ggcA*gtaA:2*caaA:2*agcR*gtcL*gccF:1*gacN:1*gctG*gacA:2*cggN:2*gccT*ggcA:1*acgQ:2*acgD:1-ctgcgg:2*accA-ggcgccaccggtgcgaccggcacattcgac*gctL:2*gacG:1*cacI:2*aacD:5*gttA:5+T:2*ggcI:2*ggcS*aacS*ggcA:3-ggcaaagcgctgtcgccaacgggcaacaacggcagccaa:10*gccT:2+GSSM*accI:2*accK:2*gacT:2*agaN:1-gcccacggcactctcttcagcagcctcgct:1*actV:5*aatA*ggcS+ALTI:1*accN:1*ggcS*accS*ggcA:1*accA:10*tccG:1*ctgG:1*gcgY*accI*ggtE*gcgS*acaL*gggD*gcgG*gccK:1*cgcQ:5*gtcN:2*agtN:1*ggcA*cttA:1*tccG:1-ttt:1*cccG:4-ggcatgggcggcgccggcggcaccagcaccgtcagc:3*gacN:2*aggA:2*ttcN:4*cttG*gatP*gccS*agtQ*tccG:3*ggcP:1*gacF:2*cacD-ggtggcgacggcttcaggaccgctggggcg:2*cgaT:2*gacP:2*aaaV:1*gccV-gac:1*ggcD:1*ttaI*ttcG*ccgG*atcA*cctN:2*ggcQ:2*ggtH:1 +NC_000962.3 miniprot mRNA 672146 675916 1237 - . ID=MP000195;Rank=1;Identity=0.5254;Positive=0.5924;Target=sp|Q79FP3|PG26_MYCTU 1 491 +NC_000962.3 miniprot CDS 675276 675916 618 - 0 Parent=MP000195;Rank=1;Identity=0.5903;Target=sp|Q79FP3|PG26_MYCTU 1 224 +NC_000962.3 miniprot CDS 672146 673085 619 - 1 Parent=MP000195;Rank=1;Identity=0.4800;Target=sp|Q79FP3|PG26_MYCTU 225 491 +##PAF tr|I6YC95|I6YC95_MYCTU 564 0 514 + NC_000962.3 699930 205230 223962 585 1581 0 AS:i:765 ms:i:793 np:i:258 da:i:-1 do:i:699 cg:Z:119M1I12M2I160M2I125M6D22M2I10M17175U42M3D12M4D4M cs:Z:*gtgM*ctgI*actD:1*ttcL*atcA*cgaK*cgcI:2*atcS*cttI:2*atcV*gtcI*tccT:1*gtcI*gcaT*atcL*gtcS:1*ttgM*ggcA*tggI*tacF:3*attL:1*agtA*ctgT*gtgF:3*cagT:1*accG*ttgV*aagS:2*ttgF*cccV:1*tcgG:4*ccgK*acgN:7*atcV*accA*attV:1*aagR:1*actE*gccS:1*gagG*cccL*accN*gacP*cagN:1*gcaV*cgaT*gtgA*acgH:1*agcR*atcL*gccN:1*aacG*tacT*aaaA:2*gtcS*gatN*gccV*tcgT:1*aacT:1*catR:4*gtgI:8*tccP*accP*ggtE*gctN:1*ggtS*aaaS+T*tacK*ttcL*tccR*tccN:1*cagF*accR:1*accQ*aagR*ggcQ*accN+TR*gttI*cccG*agtQ*gagD*atcV*gggA*ccgD*gcgL:1*gacR*aatQ*tccA*aatE*cgcT*gggL:1*gccG*gcaS:1*cccG*acgD*gagT*aagR*atcL*ggcR*ttgE:2*gacH:1*accA*gcgF*caaI:1*gtgT*ggtN:1*ctgA:2*gcgE:1*caaA:2*gtcI*gatE:1*actA*caaR*gcgL*atcL:1*ggtD*gacE*ttcA*aaaN*accA:1*attY*ggcP*gacQ:1*aacS*gacQ*atcL:1*gagD*aacQ*tccA:2*attF:1*gacQ*agcA:1*gtcI*aacR*acgA:1*gatG*cagD:1*gagK*cgcS*tggL:1*cgcD*aaaG:1*aacA*aatR*ctgF*gccT*gcaW:1*accL*gcgR*accA*aggA:1*cagP*aacR*gtgL:1*agcD*atcT:1*tccA*cagD:1*gccP*cccD*accA*gccI:2*gttA:1*gcgT*gtaA:3*gttI:1*gatP:1*ctgF:1*cagA*accL*ctgA:1*aatS:1*gagA*gttN*gtgL*ttcG*gatR*atgV*ctcG*aagV*cgcI:2*gccK*ggcS*gtgI:5*ttcV*ctcF:1*cagA+LF*ggtA:1*gcgI:1*gcaT*cagS*accA*gtaG*ctcG*acgV:1*actQ*ccgD*ggtE*gctG:1*cagK:1*ccgD*ctcF*gcgK*ccgI*gcgD*atcL*aacH*tatD:4*ttgM:5*gcaP*tcgP*gagL*tggV:5*accE:1*cccV:1*ccgE*ttgI:1*tcgR*ggaD*accM:3*attT*cccA:1*gatN*gccD*cagP*ctgS*caaT:6*attY:2*gtcQ*gatE*gtcF*ctgP:4*gcgP:1*ccgV*aagQ*gagL:2*agtD*aagP*gacR*ccgG:3*ctgV:5*tttR:1*gatP:1*aacI*cagP*attY*ctcG:1*tgcE*ccgV*gcaT*cctD:1*gcgR*cgcN*tgcI*gatL*cagP:1*gtgN:1-cccgggttggtgattccg*gcgF:1*tcgY:1*aacP*accP:1*ttgA*aatD:1*gcgD:1*gccG*gatV*cagP*gtgI*caaV:1*acgP:3+GQ:1*agtA*gacG:1*ttgG*caaP*agaA:1*ggtH*tcgQ*gP~gt17172ag-cg*ggaA*cccQ*gtcP*gacA:2*gcaP*gttN:1*ctgN*ttgG*gcgP:3*gacF*ccgT*ttgS*gcgW*ctgM:2*gcaG*cttY*gacP:1*ttgE*gcgP:1*ccgQ*ccaV:1*gacY:1*ctcA*gcgT*ccgI:3*gacP:1-ctggcagtg:1*gtaE*gcaG*gcgT:2*gttP*gccP:1*cagP*gatA:1-acatcgtttgtt:2*ccgQ:1 +NC_000962.3 miniprot mRNA 205231 223962 793 + . ID=MP000196;Rank=1;Identity=0.3700;Positive=0.4896;Target=tr|I6YC95|I6YC95_MYCTU 1 514 +NC_000962.3 miniprot CDS 205231 206593 708 + 0 Parent=MP000196;Rank=1;Identity=0.3701;Target=tr|I6YC95|I6YC95_MYCTU 1 455 +NC_000962.3 miniprot CDS 223766 223962 85 + 2 Parent=MP000196;Rank=1;Identity=0.3692;Target=tr|I6YC95|I6YC95_MYCTU 456 514 +##PAF tr|O06315|O06315_MYCTU 376 0 376 - NC_000962.3 699930 443069 444197 1128 1128 0 AS:i:1971 ms:i:1971 np:i:376 da:i:0 do:i:0 cg:Z:376M cs:Z::376 +NC_000962.3 miniprot mRNA 443067 444197 1971 - . ID=MP000197;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06315|O06315_MYCTU 1 376 +NC_000962.3 miniprot CDS 443070 444197 1971 - 0 Parent=MP000197;Rank=1;Identity=1.0000;Target=tr|O06315|O06315_MYCTU 1 376 +NC_000962.3 miniprot stop_codon 443067 443069 0 - 0 Parent=MP000197;Rank=1 +##PAF tr|O06407|O06407_MYCTU 449 0 449 - NC_000962.3 699930 633057 634404 1344 1347 0 AS:i:2327 ms:i:2327 np:i:449 da:i:-1 do:i:0 cg:Z:449M cs:Z:*gtgM:448 +NC_000962.3 miniprot mRNA 633055 634404 2327 - . ID=MP000198;Rank=1;Identity=0.9978;Positive=1.0000;Target=tr|O06407|O06407_MYCTU 1 449 +NC_000962.3 miniprot CDS 633058 634404 2327 - 0 Parent=MP000198;Rank=1;Identity=0.9978;Target=tr|O06407|O06407_MYCTU 1 449 +NC_000962.3 miniprot stop_codon 633055 633057 0 - 0 Parent=MP000198;Rank=1 +##PAF tr|O33270|O33270_MYCTU 179 0 179 + NC_000962.3 699930 408633 409170 534 537 0 AS:i:945 ms:i:945 np:i:179 da:i:-1 do:i:0 cg:Z:179M cs:Z:*gtgM:178 +NC_000962.3 miniprot mRNA 408634 409173 945 + . ID=MP000199;Rank=1;Identity=0.9944;Positive=1.0000;Target=tr|O33270|O33270_MYCTU 1 179 +NC_000962.3 miniprot CDS 408634 409170 945 + 0 Parent=MP000199;Rank=1;Identity=0.9944;Target=tr|O33270|O33270_MYCTU 1 179 +NC_000962.3 miniprot stop_codon 409171 409173 0 + 0 Parent=MP000199;Rank=1 +##PAF tr|O50380|O50380_MYCTU 264 0 190 + NC_000962.3 699930 67795 68359 312 570 0 AS:i:530 ms:i:530 np:i:133 da:i:426 do:i:0 cg:Z:122M2I66M cs:Z:*atcM:2*accS:3*gggR:2*ggcA*agcA:2*gccD:2*gttK:4*acgV:2*accS:1*accV:1*aacH*cacK:1*ttcL*aacR*tatR*ctgM:7*gtcG:1*aacH*ctcT*aacT*ccgY*tcgP:1*ctgE:1*tatF:1*ggcA:4*ttcI*acgG:1*atcT*actN:2*accA:2*ggaA:1*gccV*tcgA:1*gtcI*gacG*gccT*tttW:1*cgtP*ggaA:3*atgA*ttgS:1*atcL*atgI*cacD*gccS:1*gacG:2*ctcV*gccG*actD*gtgM*tcaD:1*gggE*gccG*acgS:4*cgtC:4*ctgV:5*gaaN:1+PS*tccD:1*tccQ*ccgV*tcgA*gaaT:1*actN*agcK:2*aacS*accD:2*caaH:2*cgaQ*gcgH*tatF:10*gtaA:1*caaA*ccgA*ccgA*gcaS*cgtQ:3*ccgA:5*agcT*gcaT:2*cagR:4*agcD:1*gtcI:1*ttcY:3*aacD:1 +NC_000962.3 miniprot mRNA 67796 68359 530 + . ID=MP000200;Rank=1;Identity=0.5474;Positive=0.7000;Target=tr|O50380|O50380_MYCTU 1 190 +NC_000962.3 miniprot CDS 67796 68359 530 + 0 Parent=MP000200;Rank=1;Identity=0.5474;Target=tr|O50380|O50380_MYCTU 1 190 +##PAF tr|O53370|O53370_MYCTU 590 0 544 - NC_000962.3 699930 299075 300797 651 1779 0 AS:i:799 ms:i:799 np:i:299 da:i:6 do:i:210 cg:Z:28M1D31M1D62M7I33M10D17M1I68M4D35M25D23M2I8M1D50M5I16M1I34M2I22M7D49M1I49M cs:Z:*gagM*gtcI*gagC*cggQ:1*tccR:4*gtgI*atcV:6*ttaM:2*gtcA*atcV:2*cggG*gaaP:1-ggc*ttgV*aaaR*gtaT:2*gtgL*tgcT:1*tccL*ctaY*ttcP*ggcT*aagR*gccS:2*gtcG*atgA:1*gaaQ:2*tgcM*gcgC:2*atgL*ggcA:1*gccV*aacE-ccg*aagD:3*aagE*actW:1*ttcT*ggcF:2*atgV*cgcK:2*aagD*ttcY:1*aacA*aacD*tggQ*cgtD*atgA*gccV:1*ctgI*cacM*gccC:3*ccgI:1*cggA:1*tggL*gagD:2*accK*tacM:1*gcgM*ctgP:1*gacN:2*gacP*gatE:3*agtD:2*aacR:5+RDHGKAP*tatV*ccgR:1*ctgA*gcgC*cacY*gtcA*ggcA:4*ctgH*gagM*ttgI*atcL*cgcQ:2*cagY:1*aagN*gttC:1*tcgK*ctgH*cagD*cagV:1*gacF*cacF*gccN:1-ctcggcgactacgaagcgcggatcaaagtg:1*gccY*gaaA*tgcL*accD*atcL*accA*gaaL*ctgT*ctcQ*aagT*gacP*caaS:1*gcgP*atcV:1+T:1*gccV*ttcI*ggcA:1*tggE*cggL*gaaA*agcT:1*cggD*ttcI*atcH:2*gagH:1*ccaK:3*cttI:4*atcS:1*aagR*tcgM*ttcY:1*gtgT:3*tccA*tggH*gagT*tacL:4*cacI*gcgG*ttgI*gcaV*ctgF:1*gccK:1*gcgL*acgP:1*atcE*aacD:3*gtcH:6*atgL-gtgtggccgccc*agtA*gtcG*aagL:3*gtcI*actS:1*ggtA:3*gacE:2*gtgR:1*aaaL:1*tcgG:1*aacG*tctE:3*ttcE*gacR:1*attA:1*ccgT*gtgI*ttcV-aagggccagtacgccgagacggaggaagaggccgaccagtggcttaaggacaacgactcggcccgacgcaccccg:2*ctgA:3*gagI:3*gcgS*atcM*aacV*tcaL:2*aagL*gccE:3*accA*ccgG+PL*cacK*ggcD*ggcY:2*ctcI:1*atcV-gca*tccR*cggH:1*acaG*cccE*gccE*gagV*atcL*aaaE*cggA*cgaK:2*tcgD*atgI*tatT*cacE*cagF*ttcA*aaaR*gagT*ctcY*gctL*gaaG:2*atcP*acaV:1*cagE*gcaL*atgV*gaaP:1*gggY:5*gtgL:3*gtcI*gaaP*gtaT*gacT*gcgV*gacT+GQVLR*accD*ggcN*gccT*gccS*acgV:4*ttcY:6+C*ggcV*ggtS*atgV:2*tccA:4*ggcT:3*tccL:1*ctgI*ctgN:7*ctgI*ggcA:2*gatS:1*gtaA*cggQ*gcaG+HD*ctgF*agcV*agcD*cggM:1*gcgP*gttN*tcaP*gcgE*gagA*gctM*atcV*gatV*gcgG*gcgW*gccV*cagS*cagD*gcgI:2*cccE-ttcgaaggaccgaaagacggc*tcgH*gcgG*ccgN:1*aatR*ccgV*tacA*gcgD*ctgI*catR*atgG*gacA:2*tacQ*gtgS:1*aacD*gatN*ctgN*gtcA*ggtA*atcV*atcF:1*aacT*gccE*gacE*gaaT*ataL*tccK*aggQ:3*cttD*ttgI*gccH*gagA:1*tggK*tcgE:2*cacS*aacR*gtaI*ctcT:1+H*gaaD*ggtK*cacG*cgtK*caaR*tacF:1*ccgT*ggcD*tggL*aacL*ctgE*tccA:1*gacE:1*cgcG*aacF*atgL:1*ctgE*gtcL*agcA:1*tgcV*gtgT*gccV*agaV*gctG:2*cagN:1*accK:6*accA:1*gacE:1*catY:1*ggtN*atgR:1 +NC_000962.3 miniprot mRNA 299076 300797 799 - . ID=MP000201;Rank=1;Identity=0.3659;Positive=0.5042;Target=tr|O53370|O53370_MYCTU 1 544 +NC_000962.3 miniprot CDS 299076 300797 799 - 0 Parent=MP000201;Rank=1;Identity=0.3659;Target=tr|O53370|O53370_MYCTU 1 544 +##PAF tr|O53623|O53623_MYCTU 201 0 201 + NC_000962.3 699930 86527 87130 603 603 0 AS:i:993 ms:i:993 np:i:201 da:i:0 do:i:0 cg:Z:201M cs:Z::201 +NC_000962.3 miniprot mRNA 86528 87133 993 + . ID=MP000202;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53623|O53623_MYCTU 1 201 +NC_000962.3 miniprot CDS 86528 87130 993 + 0 Parent=MP000202;Rank=1;Identity=1.0000;Target=tr|O53623|O53623_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 87131 87133 0 + 0 Parent=MP000202;Rank=1 +##PAF tr|O53646|O53646_MYCTU 211 0 211 + NC_000962.3 699930 230898 231531 633 633 0 AS:i:1050 ms:i:1050 np:i:211 da:i:0 do:i:0 cg:Z:211M cs:Z::211 +NC_000962.3 miniprot mRNA 230899 231534 1050 + . ID=MP000203;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53646|O53646_MYCTU 1 211 +NC_000962.3 miniprot CDS 230899 231531 1050 + 0 Parent=MP000203;Rank=1;Identity=1.0000;Target=tr|O53646|O53646_MYCTU 1 211 +NC_000962.3 miniprot stop_codon 231532 231534 0 + 0 Parent=MP000203;Rank=1 +##PAF tr|P96276|P96276_MYCTU 102 0 102 + NC_000962.3 699930 518732 519038 306 306 0 AS:i:508 ms:i:508 np:i:102 da:i:0 do:i:0 cg:Z:102M cs:Z::102 +NC_000962.3 miniprot mRNA 518733 519041 508 + . ID=MP000204;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96276|P96276_MYCTU 1 102 +NC_000962.3 miniprot CDS 518733 519038 508 + 0 Parent=MP000204;Rank=1;Identity=1.0000;Target=tr|P96276|P96276_MYCTU 1 102 +NC_000962.3 miniprot stop_codon 519039 519041 0 + 0 Parent=MP000204;Rank=1 +##PAF tr|P96395|P96395_MYCTU 437 0 437 - NC_000962.3 699930 254639 255950 1311 1311 0 AS:i:2241 ms:i:2241 np:i:437 da:i:0 do:i:0 cg:Z:437M cs:Z::437 +NC_000962.3 miniprot mRNA 254637 255950 2241 - . ID=MP000205;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96395|P96395_MYCTU 1 437 +NC_000962.3 miniprot CDS 254640 255950 2241 - 0 Parent=MP000205;Rank=1;Identity=1.0000;Target=tr|P96395|P96395_MYCTU 1 437 +NC_000962.3 miniprot stop_codon 254637 254639 0 - 0 Parent=MP000205;Rank=1 +##PAF tr|P96810|P96810_MYCTU 201 0 201 + NC_000962.3 699930 160868 161471 603 603 0 AS:i:1078 ms:i:1078 np:i:201 da:i:0 do:i:0 cg:Z:201M cs:Z::201 +NC_000962.3 miniprot mRNA 160869 161474 1078 + . ID=MP000206;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96810|P96810_MYCTU 1 201 +NC_000962.3 miniprot CDS 160869 161471 1078 + 0 Parent=MP000206;Rank=1;Identity=1.0000;Target=tr|P96810|P96810_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 161472 161474 0 + 0 Parent=MP000206;Rank=1 +##PAF sp|P9WGI7|GLYA2_MYCTU 425 0 425 - NC_000962.3 699930 77621 78896 1275 1275 0 AS:i:2184 ms:i:2184 np:i:425 da:i:0 do:i:0 cg:Z:425M cs:Z::425 +NC_000962.3 miniprot mRNA 77619 78896 2184 - . ID=MP000207;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGI7|GLYA2_MYCTU 1 425 +NC_000962.3 miniprot CDS 77622 78896 2184 - 0 Parent=MP000207;Rank=1;Identity=1.0000;Target=sp|P9WGI7|GLYA2_MYCTU 1 425 +NC_000962.3 miniprot stop_codon 77619 77621 0 - 0 Parent=MP000207;Rank=1 +##PAF sp|P9WHV5|PPX1_MYCTU 344 0 344 + NC_000962.3 699930 586345 587377 1029 1032 0 AS:i:1700 ms:i:1700 np:i:344 da:i:-1 do:i:0 cg:Z:344M cs:Z:*gtgM:343 +NC_000962.3 miniprot mRNA 586346 587380 1700 + . ID=MP000208;Rank=1;Identity=0.9971;Positive=1.0000;Target=sp|P9WHV5|PPX1_MYCTU 1 344 +NC_000962.3 miniprot CDS 586346 587377 1700 + 0 Parent=MP000208;Rank=1;Identity=0.9971;Target=sp|P9WHV5|PPX1_MYCTU 1 344 +NC_000962.3 miniprot stop_codon 587378 587380 0 + 0 Parent=MP000208;Rank=1 +##PAF sp|P9WI17|PPE23_MYCTU 394 37 348 - NC_000962.3 699930 467013 467998 453 1023 0 AS:i:539 ms:i:553 np:i:191 da:i:3 do:i:339 cg:Z:55M1I108M1G32M18D3M1I17M6I10M1I14M5D22M7D30M3I7M cs:Z:*gatN:10*gccG:1*atcM:6*aggG:3*caaA:5*caaD*cggG:2*aacA:2*accS*gcgS*acgA:1*gctT*tccG:1*tccG*tcgA*gtgA:2*gggE:2*ggcN*gatM*gacR+W:1*ctgS:2*tcgA*gcaS*ctgD:2*gcgV:2*gccV*gtcL:1*tatF:1*gcgG:1*atgL*aggS*gccT:2*gccT*tcgL:5*gctM:2*gtgR:3*aacA:1*tacF:1*tcgA:1*tacF:1*gcgM:4*acgP*gtaA:5*cgcT*acaL*atgL*ctgM*tcaT:2*cagD:2*gttW:10*agtT:1*acgS*cacQ:1*ggcA:4*catQ:1*atcA*ttgA:2*gacY:3*ggcS:1*tcgA*gggA*gccP:1*tccT*cagV:1*cT*gccP*gttF*cacA:3*gcgQ:2*agcN*gggA*gccT:1*tcgL*ctgV*agtG*gacH:1*gccT:1*acaV:2*cagL*gcgR*gtaG*gtaQ*ccgH*gccS*gccW:2-accgacgtgagcctgctaccaaccctgcagtccttcctaccgccgcccttcgac:3+W*aacS*cccD:1*gagQ*gatK*cttY*gacW*gttM*ctcM*gtaF*gccL*gcaG:1*gtaL:1*gtcT:1+EGFIYD*gctS:1*agtG:1*gggT*gtaL*tcgN:1*gcgL:1+F*ctcV:1*gagG*atcM*tacL*cgcW*cacS*gacT*gtgA*gtcL*gacA:2*caaG-aaggcgccgcattgc*ccaA:2*tccA*gacA*cagA*acaG*cccA*gctG:4*gacW*gggS*gatA*ctcW*cctS*gagQ*gtcL:1*ggaA-cgggtcaccagcccgccacag*ccgG:4*ctcS*accA*ggcT*tacL*tccA:1*aacK:2*ggaP*ctcM:3*cacP*agcG:1*aatS*cttA:3*gtgT*cgcP:1+AQT:2*gcgR*atgS*ttcI:2 +NC_000962.3 miniprot mRNA 467014 467998 553 - . ID=MP000209;Rank=1;Identity=0.4428;Positive=0.5601;Frameshift=1;Target=sp|P9WI17|PPE23_MYCTU 38 348 +NC_000962.3 miniprot CDS 467014 467998 553 - 0 Parent=MP000209;Rank=1;Identity=0.4428;Frameshift=1;Target=sp|P9WI17|PPE23_MYCTU 38 348 +##PAF sp|P9WKT9|Y499_MYCTU 291 0 291 + NC_000962.3 699930 589182 590055 873 873 0 AS:i:1532 ms:i:1532 np:i:291 da:i:0 do:i:0 cg:Z:291M cs:Z::291 +NC_000962.3 miniprot mRNA 589183 590058 1532 + . ID=MP000210;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKT9|Y499_MYCTU 1 291 +NC_000962.3 miniprot CDS 589183 590055 1532 + 0 Parent=MP000210;Rank=1;Identity=1.0000;Target=sp|P9WKT9|Y499_MYCTU 1 291 +NC_000962.3 miniprot stop_codon 590056 590058 0 + 0 Parent=MP000210;Rank=1 +##PAF sp|P9WLT9|Y1588_MYCTU 222 0 222 - NC_000962.3 699930 104436 105101 624 666 0 AS:i:1061 ms:i:1061 np:i:212 da:i:0 do:i:0 cg:Z:97M2G124M cs:Z::18*gacE:12*agcT:14*gcgV:5*gccV*cagG:1*acgA:6*accA:24*gaaD:1*ggcA:2*agcI:1*gaaD:1*aagA*ccD:2*caaP:121 +NC_000962.3 miniprot mRNA 104434 105101 1061 - . ID=MP000211;Rank=1;Identity=0.9369;Positive=0.9550;Frameshift=1;Target=sp|P9WLT9|Y1588_MYCTU 1 222 +NC_000962.3 miniprot CDS 104437 105101 1061 - 0 Parent=MP000211;Rank=1;Identity=0.9369;Frameshift=1;Target=sp|P9WLT9|Y1588_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 104434 104436 0 - 0 Parent=MP000211;Rank=1 +##PAF sp|P9WMB1|Y0026_MYCTU 448 0 448 + NC_000962.3 699930 29721 31065 1341 1344 0 AS:i:2278 ms:i:2278 np:i:448 da:i:-1 do:i:0 cg:Z:448M cs:Z:*gtgM:447 +NC_000962.3 miniprot mRNA 29722 31068 2278 + . ID=MP000212;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WMB1|Y0026_MYCTU 1 448 +NC_000962.3 miniprot CDS 29722 31065 2278 + 0 Parent=MP000212;Rank=1;Identity=0.9978;Target=sp|P9WMB1|Y0026_MYCTU 1 448 +NC_000962.3 miniprot stop_codon 31066 31068 0 + 0 Parent=MP000212;Rank=1 +##PAF sp|P9WMY7|MSHA_MYCTU 480 0 480 + NC_000962.3 699930 575347 576787 1440 1440 0 AS:i:2465 ms:i:2465 np:i:480 da:i:0 do:i:0 cg:Z:480M cs:Z::480 +NC_000962.3 miniprot mRNA 575348 576790 2465 + . ID=MP000213;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMY7|MSHA_MYCTU 1 480 +NC_000962.3 miniprot CDS 575348 576787 2465 + 0 Parent=MP000213;Rank=1;Identity=1.0000;Target=sp|P9WMY7|MSHA_MYCTU 1 480 +NC_000962.3 miniprot stop_codon 576788 576790 0 + 0 Parent=MP000213;Rank=1 +##PAF sp|P9WNF9|ETHA_MYCTU 489 4 475 - NC_000962.3 699930 656033 657443 693 1413 0 AS:i:1205 ms:i:1205 np:i:303 da:i:27 do:i:21 cg:Z:193M1I277M cs:Z:*gtcL:11*ctgV*ggcS:2*tacW*cggH*atcL*atcQ*gaaD:1*aacC:1*cagT*ctgK*accS:1*accA:3*aggK:1*gcgE*cggS*atcM:11*gtgI:4*agcD*atcM*ttcY:2*tcgG:1*cccR*tacF*gagR:3*cgcG*gaaR*gaaQ*ggcA:4*gccK*cacP:1*cgcL:2*ctcV*accK*gacS*atgT:1*cacA*aagM:7*gagR:1*aacH*agcH*tacK:1*cgcI*gcaS:3*gacS*tcaT*tccA*accE*gatN*accR:3*accH*ttcI*gagQ*cagS*aacH:1*gtgT*cacL*aagS*cacA*tacL*cgcT*agcC*cggE:1*gtgL:1*ttcL*ggcC:10*accS:1*gacR:1*ggaA:1*atcS:1*aagD:1*ggcV:1*gcgP*gtaI*gtgI:11*accD*ggcA:1*aagN:13*atcV:1*tcgA:1*accA:1*cggS+G:1*gaaK*aagH:10*ctgI*atcV:1*gcaQ*tccP*aaaD*tacR*agcD*acgG*ttcI:1*gccE*gttK*gttL*cgtN*aaaR*gcgW:2*cccE*aaaT*actM*tctA*cacY*ttgT*attA:2*atgW*tacK:1*gcgV:1*ttgR*gaaQ:1*gtgA*ttcV*tggY*ttcS*ttgA*tccC*cgcQ:1*acaW:1*gtgR*ttcR*gtgM*aaaR*tggK*ctgM*ctgF*cgcL*cgtS*accL*gcgI*atcQ*aaaR*aatQ:6*atcV*gaaR*accK:2*acgG:1*cggH:10*atcV:1*gacN*gccG:2*tacF*aacR:2*accR*agcH:1*cgcK*gccV:5*catT:1*gacE*cacR:1*gacT:4*gcaR:1*aaaN:2*gggR*cacE:1*gatP:4*gtcI:5*cagN:2*gcgL*cttF:3*gcgT*atcA*agcT*ctcI:2*gtcQ*gagQ*atcV:1*cctI*cggT*gatT*cgcT*tttM*gtcA:2*gcgG*cacM:2*gaaS*gacG*gtgI:2*ctgM*ttcA*tggY*tgtT:10*cgcK:2*atgL*acgV*gccS*cggE*gcgF*acgV*gcaC*aaaR:2*gcaN*cacY:1*gccD*gccD*catN:1*cacF*acgD*cgcT*gccV*gccV*ccgV*cacE*ctgR*ggcP*gacG*gagS*ccgD*atgV*gacE:1*aaaR:1*tccF*tggM*gacE*attF*cagT*gccP:3*aagL:1*gcgS*ccgL*tacD*gcgE:3*tccQ:1*accS*aagR*cggT:2*aatR*gtaL*cgaN:4*gccR:1*gccI*atcR*gacL*tacI:1*ttcR*gacG*cgcK:1*gagD*gagD +NC_000962.3 miniprot mRNA 656034 657443 1205 - . ID=MP000214;Rank=1;Identity=0.4904;Positive=0.6433;Target=sp|P9WNF9|ETHA_MYCTU 5 475 +NC_000962.3 miniprot CDS 656034 657443 1205 - 0 Parent=MP000214;Rank=1;Identity=0.4904;Target=sp|P9WNF9|ETHA_MYCTU 5 475 +##PAF sp|P9WPI5|Y106_MYCTU 398 0 398 + NC_000962.3 699930 124373 125567 1194 1194 0 AS:i:2102 ms:i:2102 np:i:398 da:i:0 do:i:0 cg:Z:398M cs:Z::398 +NC_000962.3 miniprot mRNA 124374 125570 2102 + . ID=MP000215;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPI5|Y106_MYCTU 1 398 +NC_000962.3 miniprot CDS 124374 125567 2102 + 0 Parent=MP000215;Rank=1;Identity=1.0000;Target=sp|P9WPI5|Y106_MYCTU 1 398 +NC_000962.3 miniprot stop_codon 125568 125570 0 + 0 Parent=MP000215;Rank=1 +##PAF sp|P9WQE7|PPSA_MYCTU 1876 0 993 + NC_000962.3 699930 485733 488694 1284 3060 0 AS:i:1823 ms:i:1823 np:i:586 da:i:3 do:i:1242 cg:Z:8M1I70M1I8M6D56M8I7M3I79M1D259M1D32M6D36M1D5M2I48M1I60M2D90M2I110M1D4M4I23M4I25M9D12M4I14M3I14M cs:Z:*acaM*gacT:2*gtcI*actS*gcgG*gatE+A*aagD:1*caaR*aaaH:1*tttL*cgaI*gagD:2*tccV:1*catN:1*gagG:1*catT:1*aatD:2*agcD*ctaP:1*gttL*ccgS*attL*agaA:3*ttgV*aaaS:1*attR:1*gtcA*ttaV*gcgV*attL*cccS:1*gacE:1*ggtS*gacE*agaL*tttL:1*tttR*tgtT*attV*cccS*gatP*ttgI*gccD*gttF:1*gatE*aatH:1*agcT*gctI:1*gatA:1*attA*gatA*agtY:1+A*ttgA*aacP*cagE*cgtP:1*gctP:2-ttaagagagagtcatgga*cacD:1*gacA*aggV*aacK*acgR*cagG*ggtA:1*ggcN:1*ataL*aacD:2*gttI:2*atcV:1*gtgM:6*gatG:1*gacS*ggcC:2*cggA:5*accC:1*aagR*aagR*tgtS*gcgS:1*acaS*gcgQ*tatV:1*gatP*cgtQ*gggR*ttcW*acgQ*aatP+FEGGPPEV:1*ggaA*actA*ttcL:1*gagR*tccT+TRW:1*ggcS:2*aagP:1*gtcI*gcgD*ggtA:2*aatA*agaE:2*gatE:1*ccgS:1*gacS:2*ctgD*cgaK:11*tctA:9*attP:1*gagG*tcaT:2*cttR:1*cgtA:4*gttA:1*gtgA*tcgC*tcaL*actS*gacE:1*gtcG*cggA*cttM*gtgA:2*agcD*gctL*cagS:1*aagV*tctD*actG-att:1*gatS:1*accS:2*tctA*tcgM:6*atcL:5*attL*cagR:3*attV*gtcA*attV:10*gtgI:4*cgaQ:2*agtR:1*tggQ:2*gatH*atcL:1*cttI*gtcA*ggtA:1*acgV:1*gttL:1*attL:2*gaaA*ccaV*tggF*ggtR:2*aggD*gaaQ*gcgV:1*atcA:2*cagP:2*tgcQ:1*cacR:3*aaaA*tccT:3*atgF:5*tgcA:2*atcV:2*cagK:2*agtT:2*cgcQ*cttR*gagD:1*cggD:1*ataV:2*attV*ctgI*acgC:8*aagR:3*attL:5*agtA:2*attM*ggtA:2*gaaR*aatA:1*tgcY*aagT*agcN:1*cgcG*gtcM*gatQ:1*ctgS:1*atcV*ggcD:9*tcgL:3*aggP:3*cacR:3*atgT:1*tttL:2*aagG:2*ggaE*tctD*gggS:2*atgL:3*atcV:1*ccgT:1*atcL:2*ctgT:1*ggtA:6*ttgF:2*gcgT:2*atgA:1*gagQ*cgtH:1*tcgQ*ctgI*cttP:1*agcN*gggQ*gggH:1*acgE*gagT*ccaA:2*gctH:4*gaaD:1*ggcR*ctgM*agaK:3*gaaT*cttQ*cagT:3-gtg*gtgA*gcgT:1*cggH:18*attV*gtcI:1*gaaQ*gctG*ggtQ*tcgE:1*gggR*gcgP-gacacggtttcgggccgc:1*gatP*gttG*ggcQ:1*tccL*ggtS*ggtP*gggA:1*gtgS*gcgT*tggL:1*attV*tcgA:3*gctM*tcgQ*gcgR*ttgV*gctS:1*cagT:2*cggM:1*gggA*cggD*tatW*gtgM*cggE*gctG-cgg:1*gcgG*cttA:2+AL*gttA:2*gggA*tatH*tcgT:1*gtgN*agcH*acgH:2*gtgR*tttQ*gatP*catK*cggF*gcgG*gtgT:2*ggcA*cagR*actD:1*gatT*gagQ*ttgA*ctgI:3*gctR*gggA*gtgL*gttA:2*cggQ*ccgH*gagA*gctP:3*tgcN*ggtP*gttA+D:1*aagS:1*gcgG*ggcP*aagG:1*gctV:2*tttY*gccS:1*cagR:4*ctgA:3*agcR*gagQ:1*tatL:1*gccD*tacE:1*gttA:2*gagA:1*ctcV*gatA*gctE*gtgL*gtgE*gacP*gagV*ttgF*gacV*cggE*cacQ*ctgA*cggG*tatF*ccgS:1*cgcH:2*atcL*tggA*gggN*cacG*gacE*caaE-gatctg:1*aatV*accG*accI:1*ttcQ*gccI:1*ccgL*gcgG:1*tttI*gcgG*gtgM*gagQ*gtgL:2*tatT*cggE:1*ctcW*atgC:1*tggY:4*ggtD:2*ctgI:3*gtgM:2*ttgV:3*cacV:5*tgtT*ttgP*ccgA*gatE*gcgG*gcgL*atgR*ctgV*gtgT:1*gcgT:1*ggaS:3*cagA*gcgP:1*cccS*gccG*ggcQ:1*gccG:1*tttA*gcgL*gtgL*cagE*gccL*cgtD*gaaA*gacP*gagT*gtaT*gcgE*ccgA*atgL*ctgI*gggA*cacD+FP*gatQ:1*agcT*atcL*gcgG*gcgI*gtcY:1*ggtS:1*gctR*tcgQ*gtgT:2*tctA:1*gccP*cacT*gatE*gcgQ*gtgI*agcD*gcgE*atcL*gctI*gatA:1*ctgV:1*ggcA:1*ggcN:1*cggF*gtcA*cacS:1*ttgV*gcgN*gtcI*tcgE*catV:1*tttP:1*tcgN*gcgP*ttgA:1*gagD*ccgA*atgL*atcQ*gctP*gagA*ttcM*acaR*gccS*gttE*gcgL:1*gaaD:1*tctT*gtgP*ggcR*ttgT:3*ccgG*gtcI:2*aatT*gtgT*accY*gggA*cagD:1*gtgH*gccT*gacQ*gacP*ttcV*gccF*tcaD:1*gatE*tacH:2*cggT*catN*atcM:1*gcgN*gtgP:3*ggcQ*gacQ*agtA*gttI*cgtA:2*cacG-tgc*gccS:2*agtD+GAYH*cgtT:3*gtcI*gggS*cccA*ggtH*ggcP*ggcL:2*tcgQ*ttgA:1*gagI*gcaD*tcgT:1*gccH*gacS:2+PGAR*atcY*gtgT:1*gtgL*cccG:2*cgcQ*aaaR:1*cggT*cccD*gaaD*ccgV:1*agtT*gtgF*atgR:1*gcgN*gcgL*gccN*cagK*ggcA*ttcH-gtctcggggatgggcctggattgggcc*tcgT*gtgI*tttH*tccP*gggP*tacH*cggT:1*aagH*cggP*gtgP:1+PHPP*ttgI:2*tatT*gccP*ttcW:2*caaT*aagR*ttcH:1*ctcI*gcaT+TKY:2*ccaG:2*agcG*gacS*cccA*accP*gccR:2*cagT*atcL +NC_000962.3 miniprot mRNA 485734 488694 1823 + . ID=MP000216;Rank=1;Identity=0.4196;Positive=0.5745;Target=sp|P9WQE7|PPSA_MYCTU 1 993 +NC_000962.3 miniprot CDS 485734 488694 1823 + 0 Parent=MP000216;Rank=1;Identity=0.4196;Target=sp|P9WQE7|PPSA_MYCTU 1 993 +##PAF tr|Q6MWW6|Q6MWW6_MYCTU 1489 0 1489 - NC_000962.3 699930 580365 675916 2388 4722 0 AS:i:3180 ms:i:3264 np:i:873 da:i:0 do:i:288 cg:Z:29M1I94M1D48M2D26M2D12M1I13M2D32M4D13M3I12M1D8M2D20M1I35M6D64M12I34M1I18M2I8M9I51M2I20M5I30M6I21M6I24M1D31M6D22M1D12M3I8M1I9M2I7M1D10M5I11M2D20M1I11M5D15M4I16M1I23M3I2M6I26M4I11M2I23M10I22M2I16M2D27M2I32M1D20M3I13M1D13M4I21M1D37M1D26M3I4M3I26M1I4M4I11M3I41M4D15M6D19M5D32M9D11M38163U14M13D5M1D25M5D39M7520U14M45503V14M cs:Z::4*atcL*gcgI*acgA:2*atgF*ctgV:1*acgA:2*acgG:2*gcgT*aaaN*attL:2*acgS:1*actS:3+A*accS:2*gccS:1*gtgT*gcgT*aaaQ:2*cccA:1*tcaG:5*gtgA*gccR*gttI:5*acgG*cacF*gccG*cagL:3*accA*gtcI:5*acgA*tttY:1*gacQ:4*accA:2*gcgT*gccG:1*agcG*tcgA:1*gtgA*gccS:3*gtcA*aacA*gttA:2*agtI*ttgV:1*gccG*gcgV*gtcI:7*ttcL:6*aacD:2*gacN*ggcA*tccT*cccT-ggg*accP:1*cagG:3*ccaA:2*atcL:1*tacF:4*aacA:1*gggA*tctA:5*cgaA:2*gccP:2*gcgP:3*atcW:4*aacP:5*gtgS:1-accacc:2*gccT:2*cacA:7*tatF:1*aacV:5*tttV:4-gcggtc:2*aacT:5*accP*gccG:2+I*ttcW:1*gtcG:5*gccV:2*aacA:1-atcgcc:1*gtcG:2*acgG*tcgA*gccG*agcG*acaR*ccgA*ggtE*ggaL*tccL*ggcF*accG:6*atcA:1*ggcT*aacD:2*gccP:1*gggA*gccT:1-ggggtgctgatg:1*aacT:2*aacH:2*gccV:2*gagD:2+WLA:8*gccG*agcQ:1*gccG-cac:1*accG*aacG*ttgA:1*gctS:2-caagcc:1*ggaA*aacL:2*aatT:2*gctT:5*gtcA:2*cccA:2+R:1*cacA*ggtL:3*ctcA:2*agcQ*cacG:1*gccL:5*agcQ:2*gacT:3*cccG:3*ggcV*aacL:1*gctG*accV:1-acgtggggtcacaacctt:1*gccT:2*accK:2*aatV:2*aacV*ccgA:1*gccL:6*ggtA:1*gccQ*agcL*gtcF*ggcS*ggcA:1*gcgG*catA*ggcA*gcgG:1*ggcA*gcgG*cccV:1*accG*accA*tccG*accG*agcQ:2*aacD:2*gacA:2*aaaA:4*atcD*agcQ*agcP:1*cagA:2*gcgG*aacT+GFAGGAGGAGGA:2*aggS*ggtS:1*gacA:2*cagT*gtgN:1*aatS:5*gccQ:2*cgcA:5*ctcA:1*tttA*ggaD*tccN*gaaP*gcgT*cccG+I:1*cgcG*cccT:2*gccD:6*ggcA:1*aacA:2*actA+GG*cagA:2*gacT:4+GMIGTTGNA:1*gctV:5*gatQ:2*tccD:4*agcG*atcA:1*ttcA*aatD:1*tccD*gctQ:3*gcaT:1*tcaG*cccT:1*gggF*aatA:2*aacA:2*cctA:5*gagS*ggcS:4*ctcT+NG*gcgS*ttgG*gccG:1*tcgG:1*cagT*aacG:1*agcQ*cagG:4*gacA:4+ADNPT:1*aacI:3*cctG:1*aacD:2*cacT:1*gccG:1*ggcA*gcgG*ctcA:1*gtcG*aacA:2*gtaA*ggtA:1*gccT:2*cacT:1+GMIGTT:1*gatN*cccA:10*agcD:1*tccG*accA*cccG:2*aacG+ADADQP:2*cccT:1*aacG:1*cccG*accF*agcA:2*aacA:2*aacA:1*ggcK*agaA:1*gccG*gatS*gccS*accS*ggcA-ttt:1*cagG:1*ggcN*gcgS:2*ggcS*aggA:2*gatT:1*ggtR*ttgQ*gtcS:1*aacT:7*ggcA*aacD*ggcN*agcP*aaaT:1-ctgcccggtctgggcagg*ctcI:1*aacG*cccT:1*ctgG:6*aacA*ggtA:4*tccA:3-tgg:2*aacT:5*gccM*ggcI:2+TGN*ggcA:4*actA:2+S:2*agcA*gacG:1*gtcT:3+GG*agcA*gcgG:1*gcgT:2*cacQ-ccc:2*accA:2*gttA:2*accA:1+ADNPT:1*aaaI:2*gacT:5*gccT-gcaccc*aacG:1*gtcA:2*agcA*caaG:1*cccA:3*ggcA:1*gacT:5+M*gttI:1*ggtT*aacT:1*ggcN*cgcA:1*attV*gacG:1-gccgacggcgccacc:2*gccG*cgcQ:1*cagG:8*ggaA+DADQ*aagP:1*ggcA*cgaT:4*gggF*ccgA:4*ccgG:1+G:1*acaS*accG:2*caaS*ggcC:3*aacT*ggcN:4*accA:2*gacT*cccC:1*gacQ+VVA:2+AGISFS:2*gctS:2*agcG*gtgT*ttcG*accG*aacT*aacG:1*atcV:2*aacT:2*aacD:5*cccT*agcG+AGDP:1*gccK:2*agtT:2*gccT:1*tccG:1+GG*ttcS:1*gcgG*accA:1*tcaG:1*agcG*agcG*attA*catN*gtcF:3*aacT:2*aacT:2*aacT:1+GKGGLNTDGL*gacS*catS:1*ctcT:2*aacT:1*gcgG*gccT:2*aacT:2*aacK:2*aacT:1*agcG*ctgA+GD*cgcD*ggcS*agcA:2*gccT:2*cacT:2*aacA:4-agcagg:1*atgA:2*gacL*ggcA*ggaN:3*gccT*ggcA:4*cagI*attG:1*aacD:2*gcgQ:4+GQ:2*ggcS:1*accS:1*agtL*gacG:1*aatQ:2*gccF*attA*accG:1*agcA:2*cgcK:2*gacA:2*gtaS*ggcS:1*caaA:2*agcT-gtc*gccN:1*gacS:1*gctG*gacA:2*cggA:2*gccQ:2*acgA:2*acgA:1*ctgI+SFS*cggN:1*accS*accN:1*gccG:2*gcgG:2*acaG*ttcV-gac*gctG:1*gcgT*gacG:1*cacD:3*ggtA:3+AGDP:1*gttK:5*gccT:2*ggcT:2*aacS:5*aaaS*gcgG-ctg*tcgG*ccaA*acgN*ggcF:1*aacG:1*agcT*caaG:1*gccT:2*gatT:2*gccT:2*gccK:2*accM:2*accI*ggcA:4*agaP:1*gccG*cacD:1*actG-ctc*ttcN*agcA*agcG*ctcV*gctG:1*actK:3*ggcN:4*accS:10+GNA:4+LAN:2*tccG:1*ctgA:1*gcgN*accA:1*gcgI*acaG:1*gcgD*gccG:1*cgcQ*gccG:4*gtcQ:1*ggcD:2+S:3*tccG+QPGF:1*tttG:4*accK:2*atgA:1+GNA:1*gccT:3*agcN*accG*gtcS*agcG:3*gacA:2*aggQ:2*ttcA:2*gacA:1*cttI*gatS*gccF:1*tccN:1*gggS:3*gacT:2*cacT:2*gacV:1-ttcaggaccgct:1*gcgT:2*cgaD:2*gacN*ggcA:1*aaaT:2*gacG*cccD-ggcggtttattcccgatc:2*gctK:2*aagT:8*accS*gcaG*cacG*ctcA:1-cccctggccatcatc:1*caaS*tccG:1*cagA*cccN*ggcF*cagN*ttcG:1*agcT*cccG:1*gccT*gacG:1*cgcT:2*gccT:2*gcaK:2*ggcM:2*gccI*ggcA:1*agcD-ttctagcattctccgaatctgccggcc:3*gccG*cggG:1*gctG*cccG*tatN*tgcA*tgcG*gV~gt38160ag-at:1*gcgG*gcgK*gacG:2*attN*cgtG*cgcN:2*gccS*gacG:1-gatctggatcgcggtttcggccgacgggtatttcgccgg*tgtT:2*gtgT:1-tat*cgcG:1*gttG:1*ggtS:3*tggP*tgcT*cacG:1*cttG*cccT:1*gctG*ggtK:2*cggA*agcG:1*gctD*actG*gctG-cggctggggtgtctt*tctD*caaG*ctaA*cggD*gctG*cgtG:1*gatA*cgtT*gctG*gccV:4*gttD:1*cgcG*cgcN*agaG*ttgG*gcgN*gccG*cgtG*cctN*gcgG:3*gccV:1*cgtS*gctP:2*gctL:2*cgcA*gG~gt7517ag-gc*attG*gcgT:7*acaA:2*agcG*aacA*ggD~gt45500ag-c*cgcG:1*gtgD*tttG:5*gagG*tccN*gctN*gccG:1 +NC_000962.3 miniprot mRNA 580366 675916 3264 - . ID=MP000217;Rank=1;Identity=0.5057;Positive=0.5546;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1 1489 +NC_000962.3 miniprot CDS 671941 675916 3110 - 0 Parent=MP000217;Rank=1;Identity=0.5173;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1 1375 +NC_000962.3 miniprot CDS 633472 633780 82 - 2 Parent=MP000217;Rank=1;Identity=0.3301;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1376 1459 +NC_000962.3 miniprot CDS 625909 625954 43 - 2 Parent=MP000217;Rank=1;Identity=0.6000;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1460 1474 +NC_000962.3 miniprot CDS 580366 580408 29 - 1 Parent=MP000217;Rank=1;Identity=0.5000;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1475 1489 +##PAF tr|Q6MWW9|Q6MWW9_MYCTU 1381 0 1381 - NC_000962.3 699930 333618 339073 2301 4597 0 AS:i:2911 ms:i:2988 np:i:848 da:i:0 do:i:114 cg:Z:98M3I22M1D26M3D25M4D28M1D14M1I11M2I18M1I27M3D10M2D20M1I16M1I26M1D38M6I30M5D8M324U10M5D10M3D10M4D27M4D12M4D20M1D10M1I6M2I25M1D46M4D9M4D14M3D10M3D10M777N23M4I34M4D9M5D15M6D7M6D20M1I66M5I10M6D18M1D13M1D14M1D12M1D20M6I21M1I14M3D13M15D5M11D10M1D6M6I13M16I19M2I23M1D13M5D10M1D13M3I20M4I16M1I16M6I15M4I19M3I57M3D12M4D13M4D13M7D11M4D10M4D24M1F5M1D12M cs:Z::4*attL*gcgV*gcgS:2*gttT*atcV:2*gcgV:4*gccK*agtR*ctcI*gagG*tcgA:1*atcL:1*gcgH*gccE:2*gccS:3*aacS:3*ctgV*ctgV*gccS:1*ggtA:12*ggcS*gccQ:1*ggcA:1*gccG:3*ctcA*agcA:2*gcgV*cagA:3*gccS*cagR:6*tccA:1*ggcA:4*gccF:4*gccN*accA:3+QSA*ctcM*gccG*ccgA*atcV*aacS*gagA*ttcS*ttcA*ctgQ*gcgT*aatL*accL*gggS:7*accA:1-ggc:1*cccT*ggcT*accP:1*gccG:8*atcF:1*aacS:2*gccN:1*ggaA*tccP:3-ggcgtcaac:1*gggQ*gccS:5*gccS*ggcA:2*atcW:10*aggS*gccG-agcacggggacc:1*ggcA:3*gccN:2*gccN*gccG:1*atgW:4*gccG:1*gtcT:2*cccI:2*ttcT*gcaG:1*gctP-ttc:2*accM:2*gccT:2*gccN:4*gggA+L:1*ttcI*gccG*gacG:2*gtcL:4+GM:1*gcaG:1*gacG*gccG:4*gccT:2*tccN:4*gggA+L:1*ttcI:4*accV:2*cccA:2*ttcI:1*atcG*tttQ:1*ggcT:4*gatA*ggcA:1*tctA:1-gggctgttc:1*gccT:2*accN:2*agtA:2-acgagc*ataL*atcF*aacM*gtcN:2*aacD:5*gacQ*gccG:1*atgD*ctcG*agcA*ctcA:1+D:2*ggcA*ggcS:3*agcT:2*tccK*aacG*ccgG*gacQ:2+D:2*gccT:2*atcA:2*gacA:1*ggcP*acgV:3*tccH:5*gtcM*tgcG:1*ctgQ:1-ttc*gacG*gccT:2*gcgM:5*aagD*gcgG*ggtT*ctgT*ctcV:1*gggA:2*ggtT*gccG:1*ggcE*gccG:1*ggcT:1*tccG*ttcA:5*accA*ggtA:2+RGALTS:2*gcgL*cccA:1*ctcG:2*aacA*gccG:1*aacT:2*aacT:2*gccT*agcG*gcgG:3*ggcD:2*ggcA*ggcV*gccV:1-ggaagcggcgtgctg*atcF:1*aatA*ggcN:1*aacD*ggtP:1*aF~gt321ag-gt*attA:2*accK:2*tccN:3-ggaacgacgggccaa:2*accA*ggcA*gggV:3*gccV:1-ttgctgatc:1*tccD:5*agcK:2-tttggcctggac:6*cgcA:1*ggtN:3*ttgS*ttcT*ctcG*ggtN*gccP*gcaG:1*accK:2*cagD*gccG*gccG*ctcI*tccG-caaaactttatc:4*accA*gccG:2*ggtA:3-gggctgttcgcc:3*gccH*ggcA:1*gccN*ggcT:1*tttD:1*gcgG*aatD:7-ttg*ctcG*ttcN:1*gccT:2*accV*ggcN:2+D*ggcN:2*ggcN*gccP:1+TP:4*gggE*cacP:2*ctgA*ttcG:4*actA:3*ggcA:1*agcG*agcP:3-ttc:2*aacT:2*agcN:3*gccG:1*ctaN*ctcG*gccG*ctcN:1*gccG*tccN:2*gccN:2*agcN:2*agcN:1*ttaG:1*gtcN*ggcS*gggT*accN*ggcA*gggP:3*aacE:2*agtA:2*tcgD-ctcttcggcttc:5*accA:2*tccA-agcggcatcggc*agcA*agcN:3*ggcA:1*gacS*ggcQ:2*gccG:2-ttcggcaac:8*tttN:1-gctgacacc:2*aatG*tcgK*agcA*tcgG*gtcT*cccG:1*gccS~gt777ac:1*ggcN*gccF:1*ggaV*tccD:1*gcgE:2*gtcF*aacS:8*gccV:2+AAGA:3*gccT:2*ctcS*atcG:4*gccD:5*gtcI*gccG*agcG*agtA:1*atcG*ggcN:1*tccI*ggcP:1*gccT:1*ggcT*aacE*gccP-atgctgttcggc:3*gccT:1*ggcA*gccK:2-ggcgtagtagccctc*acgD:2*gccD:11-ctgctcttcggcgccgcc:1*gtcA:2*gccQ:2-ttcacgaacggcagtgca*ctcN*ggcA:1*gcgQ:8*ctgN*ttcA*gccV*accI*ggcP:1*gtcD:1+V:1*tccK*ggtA*gggP*gccH:1*agcD*tccA:2*gccS:2*gccD:2*gctK:2*ctgQ*ttcG:1*gccS:5*catS:1*gggA*ttcP*gccI*gacG*agcG*agcG*ttcA:2*gtcT:2*gccS:2*gccH*ggcA:1*ctgK*ttcG:4*gaaI:1*ggcA*agcQ:1*ggaT*cacT*agcI*ctgT:1*gccP:1+NGGNA:4*gccN:5-atgctcgccctcggcgcc:3*gccN:2*atcS:1*gggD*gacF:2*actN*ctcT:1*gccS:1*ggcA-ata*ggcS:1*gccS:2*gccN:5*ctgT*ctcA-ttc:4*tccA:2*gccT:2*ttcT:1*ttcL*gccS-gac:2*caaN:2*cccN:3*gccG:1*acgN-gtc*ttcG:1*tccD:2*gccN:1*ggcA*aacH:1*ggaT:2*cagA*ggcQ:1*gccV*ggcP*gggA*atcT+SLPTPN:5*accN*cccG:1*ctgT*atcG*ggtS:3*aacA*ggcP:1*aacP*ggtA:2+P*agcG*gcgP*gtgT:4*ggcA:1*atcS*ggcQ:1*accI:1-gtgttgatc:1*aatD:5*agcD:2*attK:1*gcgG-ggcaaggccggagtgggcggcgtcagcgggctgctgctcggtcta:2*ttcA*aatD:1-cccgcgagcacctcgccactgcacaccctgcag*caaV:2*ctcV*aatF*gtgM*gtgP*aacT:2-ttc:1*acgA*ctcA:2*cgcT+AGSAGD:1*ctgT*atcG:3*gccG*aacP:4*accS+PMVAPPPPTPITQVQQ:1*gctG:6*tggT*ctgG*ttcS*ggcT:1*ggcA*gccN*aacD:2*ccgA+TG:1*accK:1*gctG*gccE:2*gccV:1*gggS*tggI:1*ttcG:1*aacP:5*cacT:1*gcgG-acc:1*accA*gccS:2*gctG:1*ggcN:1*gccV*ggcA*gggN:1-ggcgggatcttgttc:1*accN:2*aatK:2*accD:2-ata*gccQ*accF:4*atcN:5*gccS+VTD:1*gggS*gtcA*tccG*ttgS*ctgT*atcA:1*tccN:2*accN:3*ggtA*gggT:1*tccG*ataT+IAGQ*ggcP*gtcA*gctG:1*atcN:1*gggS:3*cgcK:3*gccG:1+N*ttgI*ctcA*ttcA:2*gccT:2*ggcA:1*cacN:1*gccG*gctN:2+NGNDGA:1*ccgN:2*gtcT:2*gccS:5*ctgN*ttcA+GGGG:4*gccD:5*ttcA*aacG*gcaG:3*aacR:2+KGI*aacD:2*ctgF*ttcG:1*actD:2*accN:2*gccS*ggcN*acgN*aacG*ttcT:10*ctgT*ttcG:1*gccV:1*ggcS*accV:1*ggcA:1*gccG:1*tcgD:2*tccN:1*atcG:1*accG:1*ggcF*ggcA:1*cacF:2*aacT:2-ctactctcc*ctcN:1*gccG:3*gccT:2*agcA:2-gccagctccctt*gccD:2*gccT:2*accD:4*gccV*ttaI-ctcttcggcttc*cgcA:1*gccG:2*gccT:2*cacN:3*gcaS-cttaccagcatccagcaaggc:7*aacT:2*ttgF-ctcttcggctcc:2*gccN:1*ggcN:3*agcN:1-gccaacgctcta:1*gccT:1*accG*ggcA*ggcS*accE*ggcD:2*ggtN:1*cacN:2*gtgS*ttcG*ggcA*aacT:2*gacT:2-t*gccN:2*tttT:1-gcc:1*accD:2*agcA*ggtA:1*gtcL:2*aacV:1 +NC_000962.3 miniprot mRNA 333619 339073 2988 - . ID=MP000218;Rank=1;Identity=0.5005;Positive=0.5534;Frameshift=1;Target=tr|Q6MWW9|Q6MWW9_MYCTU 1 1381 +NC_000962.3 miniprot CDS 337762 339073 1074 - 0 Parent=MP000218;Rank=1;Identity=0.5519;Target=tr|Q6MWW9|Q6MWW9_MYCTU 1 432 +NC_000962.3 miniprot CDS 336674 337440 511 - 2 Parent=MP000218;Rank=1;Identity=0.5116;Target=tr|Q6MWW9|Q6MWW9_MYCTU 433 655 +NC_000962.3 miniprot CDS 333619 335896 1403 - 0 Parent=MP000218;Rank=1;Identity=0.4688;Acceptor=AC;Frameshift=1;Target=tr|Q6MWW9|Q6MWW9_MYCTU 656 1381 +##PAF tr|Q79FI8|Q79FI8_MYCTU 987 0 987 - NC_000962.3 699930 371180 434679 1299 3103 0 AS:i:1455 ms:i:1714 np:i:563 da:i:0 do:i:5028 cg:Z:177M4D26M11D23M2367N2D19M10D55M4614V136M6I19M1I5M1I4M1D28M898U21M1I25M1I21M1I26M1I23M4D12M1D17M1D17M49796V3M5I5M2I43M1D1M1F12M3D57M1473V2M2I10M4I40M4D18M5D5M1341V44M1I62M cs:Z::1*agcH*ttcY*gcgS:9*cgcL*ctgI*tacF*gtgA:3*ttgS*gcgG:3*gacA:2*gccS:6*gacT:2*ggtA:3*gccV:2*tcgG*gcgS:5*gcaV:1*tccG:2*ctgQ:1*gcgR*gcgS:1*acgV:2*acgA*ggaA:5*ctgA:3*agcA:3*gcgT:2*cagE:5*accA*cggQ*ctgV*gcgM*gcgV:1*gccE:3*gccV*ctgR*gcgL:1*acgM:1*catQ:2*atcL*atcV*tcgA:3*gcaS*ctgG*ttcL*gtgI:3*gtcI:3*ctgF:9*accA:5*cagE:3*cagL:2*gcgS:2*tttA*ggcA:2*gccS:4*gccV*gtcA*tcgV:2*acaP*ccgA:1*ggcA*cagL*gcgP:1*ccgR*accL*gtgP:2-ggcggtgcgctg*gtcL*agcA:1*gccG*gcgP:1*cagA:1*accV:1*cggA*gtcL*ttcT*cgcT*aacA*ctgV:1*ttgM*gcgP*aacT*gtcF*ggcA*gagG*ggcR*aacA*gtcI-ggcaacggtaatgtcgggaacttcaatctcggc*tcgA:1*aacS*atcL:1*aacL*ggcA:1*atcV:1*agcG:2*atcL:1*agcN*tccA:1*atcN:1*tttL:2~gt2367ag-ttgaac:2*agcN:4*gacN*ttcN:6*gtcF:3-aacgtcttctccggaaaccagggctcatac:3*ccgS:4*aacG*tacN:3*ttcI*gcgG:1*ctgA:1*aacA*tacN:1*atcF:1*ttcL*ggcA:1*gccL:1*gatN*ttcL:1*caaT:4*accA:1*aacI*aacG:1*atcF:1*tttI:9*atcN:1*ctL~gt4611ct-a*tccT:1*gacN*agcN:1*gtgI:4*accL:3*agtN*ttcG:1*atcV:4*tcgA:1*accS*ggcA:1*gtcI:1*atcF*ggcF:3*accN:2*gtcF:4*accS:1*accN*ggcF*aacS:2*atcL*ggaF:1*agcP:1*aacH*tacG:3*ttgF:4*ctgS*gtcF:3*atcM*gccF*aacD*ccgV:2*cacA:3*ctgS:2*atcV:1*accH*ttcY:1*accF:1*atcA*gccF:3*cacP*tacS:3*tccT*tacF:3*agcG*tacA:3*atgW*gcaF:1*gccT:1*gacS*tacI*ggcN:4*atcN*accI:1*agcD:5*ctcF*tggN*cgcT*gccG:1*cggM+NNGVFY*cagR:1*ctgV*ctgG*gcgQ*gccG*aacS*tacL*accQ*atcF*accA:1*gagT*cgaS:1*gccD*gcgL*ttcT:1+P*aatS*gtcL*gacE:2+G*gtcI*aacS*atcV:1-atc*accA*ggcF*gacS*atcL*accP*aatA*gtcI*tccT*atcL:1*gccS*attL:1*ttcI:1*agaA*atcV*gacT*gccT*agcP*ggaA*agcN:1*gacT*ataV:1*atcA*ctcF*aD~gt895gg-ca*acaL*tcgP:1*tatL*tcaT*actV:1*gcaS*ccgL*gcaT*acaI*tcgP:1*tcgA*gcaM:3*ccgN*gcaI:1+V:2*tcgF*gaaD*actL:1*gtgG*actL:1*acaV:1*gcaS*tcgL*gcaT*acaI:2*gcaT*ccaT:3*tctN*tcaI:1+V*ccgG:1*tggF*tcaN*acaL:1*gcaQ:1*gcaS*actI:1*gtgS*actV:1*acaV:1*gccP*tatI*tcaT*acgI:1+A:2*ccaA*acaL*ccgG:1*gctF*tcaN*accL:1*gcgT*actL*acaS*acaI:1*gcgS*gctV*tcaT*accV:1*gtaP*actI:1*acaI:2+G:1*tcaT*accV*cggG*gcaG*actF*ccaT*acaL:1*gcaT*tcgI*ccaH:2*gcgL*atgI:3*gcgQ*cctI:2-cgggcaactaca*gcaG*acgG*gctF:1*tctT*ggcP:1*gcgI*actA:1*aggQ:1-tag*gcgN*gttS*tcgG*cctV*accI*agaN*gcgL:1*tttT*ccgF*aaaS*tccL*cgtN:1*gctI:1*acaI-ggt*tccT:1*attL*gaaV*ataV*cccF:1*gagP*ggcN*gacN:1*aacT:1*atcL*accQ*cagT*gacN*gcM~gt49793ag-c*aacP*aatG:1+FPQIG:2*gggA:2+PP*ggcA*agcF*aacI:1*gtcT:1*atcT*gggI*ctcT*accV:1*aacG:3*gggN*ttcG*ggcV*agcG:1*aacS*tcgI:1*agcA*cacI:1*atcV*ggcT*ctgP:1*aacT*tccL*ggcP*agcN*ggaV*aacV*gtcI*gggQ*ttgP*ttcW*aacS*tcgL:1-acc:1-a:2*gcaV*tcgD*gaaG*acaF*gcgT*gcaL:2*actI:1-gcctcggca:1*cggQ*gcaE*gcaF*ccaT:3*ggtL*tcaT*acaI*ccgS*gcgP*acgI*tcaG*acaV*ccgG:1*gctL:1*accL*cggP*gcaD*gctI:2*ccgQ*ggaQ*actF*tcaT:2*gcaE*actL:1*acaI*ccgD*gcaP*gctI*tcaT*acgL*cagG*gtaG*actF:1*acaL:1*gctQ*actL:1*acaI:2*actI:2*ctgP*gaA~gt1470ag-c:2+ID*gacP:1*gtaA*tacL*agcG:1*ctcF*gatT:2+QIMT:1*aacE*acaI*gccT*gtcT*actP*gttP*attF*tttA*ttcI*ggaD:1*gtcI*gatG*atcL*gacS*cccG:2*gtcL:1*gtgQ*ataV*cggN:1*accP*ggtE*cccI:1*cctT*gtgP*gtcE*atgF*gtgT*ggtI*ggaQ:1*actV*accG*gcgL-atcaatatcggc:1*actA*gtgF*gtcT*gtcT*gacP:1*atcL*aacT:1*ccgA*attS:2*attL:1*gcgS:1-ccaggcttcggcaac*tcgT*accM:2*ctgF*tcA~gt1338ag-t:3*gcgG:2*ttcY*ggaF:2*accS*accA*aacT:2*tcaL:4*accA:1*gccI:2*gccN:5*ttcS:1*ggcS*gccG*aatL:2*tttW*tggF:1*ctgT*gccS*tccP+V*gcgG*accL*tcgL*gggA*gcgG:2*ctcY*ctcQ:1*gtcY:1*gccG:1*ggaI:2*ctgF*gcgS:1*gtgL:1*accS*accG*gtcI:3*tacA:2*agcG:1*tcgL*gacP*ctcF:1*acgV*ccgT*gccS*ttcL*aatV:6*agcG*accN*agtN*atcL*gccS:2*ctgF*cgcF*gacQ:2*ggcT*accP +NC_000962.3 miniprot mRNA 371181 434679 1714 - . ID=MP000219;Rank=1;Identity=0.4186;Positive=0.5443;Frameshift=1;Target=tr|Q79FI8|Q79FI8_MYCTU 1 987 +NC_000962.3 miniprot CDS 433957 434679 602 - 0 Parent=MP000219;Rank=1;Identity=0.5270;Target=tr|Q79FI8|Q79FI8_MYCTU 1 226 +NC_000962.3 miniprot CDS 431330 431589 220 - 0 Parent=MP000219;Rank=1;Identity=0.5747;Target=tr|Q79FI8|Q79FI8_MYCTU 227 300 +NC_000962.3 miniprot CDS 426138 426718 426 - 1 Parent=MP000219;Rank=1;Identity=0.4356;Acceptor=CT;Target=tr|Q79FI8|Q79FI8_MYCTU 301 501 +NC_000962.3 miniprot CDS 424735 425242 139 - 2 Parent=MP000219;Rank=1;Identity=0.3121;Acceptor=GG;Target=tr|Q79FI8|Q79FI8_MYCTU 502 668 +NC_000962.3 miniprot CDS 374563 374941 48 - 1 Parent=MP000219;Rank=1;Identity=0.3000;Frameshift=1;Target=tr|Q79FI8|Q79FI8_MYCTU 669 797 +NC_000962.3 miniprot CDS 372838 373092 44 - 1 Parent=MP000219;Rank=1;Identity=0.2527;Target=tr|Q79FI8|Q79FI8_MYCTU 798 879 +NC_000962.3 miniprot CDS 371181 371499 235 - 1 Parent=MP000219;Rank=1;Identity=0.4766;Target=tr|Q79FI8|Q79FI8_MYCTU 880 987 +##PAF sp|L0T5V6|VPC51_MYCTU 137 0 137 - NC_000962.3 699930 274308 274719 411 411 0 AS:i:684 ms:i:684 np:i:137 da:i:0 do:i:0 cg:Z:137M cs:Z::137 +NC_000962.3 miniprot mRNA 274306 274719 684 - . ID=MP000220;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|L0T5V6|VPC51_MYCTU 1 137 +NC_000962.3 miniprot CDS 274309 274719 684 - 0 Parent=MP000220;Rank=1;Identity=1.0000;Target=sp|L0T5V6|VPC51_MYCTU 1 137 +NC_000962.3 miniprot stop_codon 274306 274308 0 - 0 Parent=MP000220;Rank=1 +##PAF tr|L7N658|L7N658_MYCTU 269 57 266 - NC_000962.3 699930 695673 696294 306 627 0 AS:i:526 ms:i:526 np:i:145 da:i:129 do:i:3 cg:Z:89M2I118M cs:Z:*gagD*attV:1*ccgN*atcL*gagQ:1*cttI:1*gaaD*atgL:2*gtgL*cttI:2*tgcL:3*accS*ggcA*gccS:3*gtgL:1*gcaS:2*aacT:1*ctgA*tcgE:2*gctV:2*accL*gctP*ggcP:2*gccD:3*gcgT*gcgL*ttcY:2*cacD:1*gtgI:8*cgcK*aagR:1*attV*cgcD:3*ctgV*gtgL*gtcL*tcgL:5*tgtA*cacR:1*ctcV*ggcN:1+SP:3*acgG*ctgP*gatH*cgcA*cccN*ggcP*cgtN*ccaA*ctcA:1*ccgA*ctaI*ctgI:4*gcgI*aacA:1*attL:1*aaaR:2*accG:2*accQ*gaaQ*cggA:1*agtR:1*tggF:1*tttY:3*ggcD:6*gtgI:2*catT*cccA:2*cggL*gtcI*tgcA*ggcA:2*gtcI:1*gcgS*accA*agcA:1*ccgL:1*gccG*gagR:1*ctgT:1*ggcS*ctaI*cgtS*tatR:1*gccR*gagD*cggK*ctcV*gatG*gatA:2*cagA*ttcG:2*ctgI:1*accH*gccT*gcgG:1*gaaQ:1*accQ:3*ccaD*acgR:3*ttaV:1*gttI*agcD*acgI:2*gccS +NC_000962.3 miniprot mRNA 695674 696294 526 - . ID=MP000221;Rank=1;Identity=0.4880;Positive=0.6938;Target=tr|L7N658|L7N658_MYCTU 58 266 +NC_000962.3 miniprot CDS 695674 696294 526 - 0 Parent=MP000221;Rank=1;Identity=0.4880;Target=tr|L7N658|L7N658_MYCTU 58 266 +##PAF sp|O07244|GLPQ2_MYCTU 264 0 264 - NC_000962.3 699930 385175 385967 792 792 0 AS:i:1356 ms:i:1356 np:i:264 da:i:0 do:i:0 cg:Z:264M cs:Z::264 +NC_000962.3 miniprot mRNA 385173 385967 1356 - . ID=MP000222;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O07244|GLPQ2_MYCTU 1 264 +NC_000962.3 miniprot CDS 385176 385967 1356 - 0 Parent=MP000222;Rank=1;Identity=1.0000;Target=sp|O07244|GLPQ2_MYCTU 1 264 +NC_000962.3 miniprot stop_codon 385173 385175 0 - 0 Parent=MP000222;Rank=1 +##PAF tr|O53158|O53158_MYCTU 609 0 609 - NC_000962.3 699930 293800 295633 1185 1833 0 AS:i:1996 ms:i:1996 np:i:467 da:i:-1 do:i:0 cg:Z:483M2D126M cs:Z:*gtgM*agcG:2*cggI*agcA:4*cagL*gttE:3*ttcL:3*ggcD*gtcI*gacG*aaaA*gctV:2*catT:1*gaaR*ttcY:2*gtcL:4*gccV:1*gacT*atgI:3*gtcA*agcA:6*gtgI:4*gtcG*gaaY*gggA:9*aaaN:3*gtgI*atgS*ctgV:1*gaaD*tcgE*ttcL*aaaA:1*tcaT:1*aacQ:1*atgI*ctgK:4*gacW*aagR*gtcL:1*atcL*gacA:1*gcaE*ctcI:4*atgA:1*aagP*gcaP*gtgL*gtcA:2*ctgV*catN:1*cacM:1*ttgY*ggcC:3*gcgS*gtaA*tggC*atgF*tacF*gccN*ggcL:1*gcgP*ggcV*ttcL:2*atcS:2*cacI*ctcE:1*accN*gagD:2*aagR*aagR:2*gtcA*ctaE*gccG*gccV*gaaQ:3*ggaQ*tcgA:15*gccG:4*gtcF*caaE:1*gccP:2*tccT:3*gacE:6*accS*tcgG:2*tccV:1*gacN*ctgT*ttcA:23*tacF*ttcY:2*aagN*ttcY:3*gtcP*gaaD:1*ggcF:1*cccL:1*gagA:4*ttcY:2*aacG*gtcL:7*gtcS:1*gcgP:4*gcgT:2*caaG*cacA*ggcD:3*aagV:1*tggY:3*gagG:9*gagT:3*cagH:3*atgT*gtcI:1*acgV:1*gccS*atcA*gcgG:10*cagA*tacF:2*tccE:20*acaM:25*accA:1*actA*ttcH:2*gcgD:3*gagQ*gtgR:1*cacS:1*gtgA:1*gccH*aagD*ttgM:1*gtcH*aagR:1*aacD:2*atgL:2*gtaI:7*cagR:2*gccE*aagI:14*cagV:3*atcL:21*caaL:10*aagH:1*gtgK:2*gcgQ*cacF:1*tcaL*ggcA:1*atcV*cagT*gagH*ttcT:1*gacE*agcN-ggtgct*ggcI*aacD*ggcP*cggS:2*accP*gaaQ*cgcA*gcgE:2*gccR*aagT:2*accD:1*gtcI*cagT*ggcA:1*gcgT*gccG:7*gccS:1*cagA:1*gacH*gtcS*accS*agcD*ctcI:9*ttcY:1*atgL*agcA:4*atcL:3*ttgR:1*cagL*cgtV*cagL:1*gcgG:2*gtgH:3*gacA*gcgD:1*gccP*accS*ggcQ*gacN*gagD*cggE*tccA:2*gaaR:2*gtcI:3*tcgA:5*ttcM:2*ctgK:2*agcG*accV:1*gagS:3*acgN*ctgI:1*aacD:3*gaaR*ctcV*gacP:1*gccD:2 +NC_000962.3 miniprot mRNA 293798 295633 1996 - . ID=MP000223;Rank=1;Identity=0.6465;Positive=0.7643;Target=tr|O53158|O53158_MYCTU 1 609 +NC_000962.3 miniprot CDS 293801 295633 1996 - 0 Parent=MP000223;Rank=1;Identity=0.6465;Target=tr|O53158|O53158_MYCTU 1 609 +NC_000962.3 miniprot stop_codon 293798 293800 0 - 0 Parent=MP000223;Rank=1 +##PAF sp|O53580|FAA32_MYCTU 637 44 618 + NC_000962.3 699930 484030 485695 639 1767 0 AS:i:780 ms:i:759 np:i:282 da:i:54 do:i:36 cg:Z:43M3D140M6D23M1D26M3I2M1I12M1I143M5I72M3I1M1I8M20I13M2D7M3D50M cs:Z::1*tttY*gtgR:1*atgL:1*tacF*gacS:1*aaaE*accR*ggcD*gacG*caaV*attA*gacR*cgaD*atgI*acgL:2*caaD*ttaF*tatS*tctA:1*gtcN*accR:2*tctG:1*tatR:1*ataQ*agtQ*tatV*ggcT*cggQ*catP*gctG:2-cgaaggacc*gcaV:2*tcaL*gctC:2*ggtN:3*gttL*gcaI*ggaS:1*ctaF:3*tgcY*gccS:1*tggR*acgI*ccgA:3*ccaF*gaaD:1*ctgA*ggcE*agcP*ctaG*cgcH*gatV*aagG:1*actL*ggaH*ctgA*gctV*gtaL*ctcD:3*gccP*gacS*gtcT*gtgI:3*tcgT*caaD*gccS*gaaA*acgE*cggG:2*gccK*acgF:1*gctR*acaA*catR*gggS:1*tctK*gtaE*actR*acgP*ccgR:3*ttgV:1*acaA*ttgV*gacP*gagT*ccaE*tccV*ggaA*gatA*aacT*tgtW*gatQ*ctcQ*gatP*tctE*caaA*ctaN*tcaE*gacE*tggT*agtV*tcgA:9*gccR*aacI:1*cgtS:2*gttQ*ttaI*tccT*atgH*cgtL:1*gttL*acgP*gaaT:2*gacV:1*attV*atcL*cgtN*aacA*tatL*tttE*cgcG*catQ:2-ggcgcgccgaggttgccc*agcD*tcgR*gtcG:5*cttF*tacF:5*atgI*gttT*ggcV:1*tttL*attA*ccgS*ttgV-ttt*gtcL:1*tgtH*ccgS*gttF*atcT*ctgF*acgM*agcT:1*gagA:2*atcV:1*aagR:1*gccG:2*atgI*caaR*ctgE:2*aaaR+KPG*cacE*cagT+G*gcgG*ccaT:9*gatE+H*ttgA:2*gctR*aaaG*actV*tccP*gaaR*gagD:1*atgE*gcgP*gggP:3*ggcS*cacN:1*aatK*acaG:1*atcL:2*gcgS:1*cagP:1*cagS:1*aatA*acaS*ataM*accR:2*ctcF*cgcE*cggA:1*cgtA:2*aatG:1*atgK*cccQ*gcaT:7*atgL:3*gtgT*gttL*tacF*ctgV*gcgS:2*aagP*gcgM*ggaD*tcaE*cctV:2*tcaV*accI*gagH*ttcV:1*gctR:1*agcE:1*gctN*cgaN*ggcQ*cacR*gcgF*gagV*ctaE*agtV*actA*ttcA*gaaD*actA*gagP*cgtN:1*acgV*cgtA*ttaQ*ataV*cgcS*tacA*cacG*agcK*gacV*gacG*aagV*gaaS*ccgE*ttgW*cttA*cggV:3*ccgA:1*tcgT*aatA*atcS:2*ggaP*ccgD:1*cgtQ:5*attL:2*aagN:1*gtgL*tctG:3+WGKEE*cacE*aatS:1*gacQ*gacT*gcgF*ctcK:1*cgaI*gatL:1*ttcS*cagR*gccI:1*atcE*cggS*gagR:1*tctE*gcgG*ggaA*acgP*ccaD*aggD*tcgA*ccgL:1*cttV:4*ttgY:1*ttcT*ataY*gtaF*ggaK:1*gagH*ttcL:2*gtcA:2*atgI:3*attV:1*caaI:2*gtaR:4*gatQ:1*atcL:1*actC:1*gtcA*aagQ:1*tttS:1+KAL*ggtR+V:1*cggY*gtcA:5+PANQLPQTVFDDSHAGLKFD*tccP*gacE:1*gggT*gtgS:1*catQ:3*gcgV*gccG:1-gtaagg*actR*gagA*catA:1*cccT*gatH:1-gtgactatt*atgL:1*ttcH*tcgQ*acgP:1*aaaV*aggD*ctgD*gtcI*gtaR*tcgA:1*ttgI*tcgA*aaaV*ttaG:2*ctgV*catT:1*acaR:1*tttV:3*ccgS*cccA:1*gcgT*ctaI:1*aagR:1*accS:4*agcG:1*gcgR:2*gcaR*aagA*cagA:1 +NC_000962.3 miniprot mRNA 484031 485695 759 + . ID=MP000224;Rank=1;Identity=0.3616;Positive=0.4788;Target=sp|O53580|FAA32_MYCTU 45 618 +NC_000962.3 miniprot CDS 484031 485695 759 + 0 Parent=MP000224;Rank=1;Identity=0.3616;Target=sp|O53580|FAA32_MYCTU 45 618 +##PAF tr|O53668|O53668_MYCTU 436 0 436 + NC_000962.3 699930 296808 298116 1305 1308 0 AS:i:2148 ms:i:2148 np:i:436 da:i:39 do:i:0 cg:Z:436M cs:Z:*gtgM:435 +NC_000962.3 miniprot mRNA 296809 298119 2148 + . ID=MP000225;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O53668|O53668_MYCTU 1 436 +NC_000962.3 miniprot CDS 296809 298116 2148 + 0 Parent=MP000225;Rank=1;Identity=0.9977;Target=tr|O53668|O53668_MYCTU 1 436 +NC_000962.3 miniprot stop_codon 298117 298119 0 + 0 Parent=MP000225;Rank=1 +##PAF tr|O53671|O53671_MYCTU 273 0 273 - NC_000962.3 699930 300836 301655 819 819 0 AS:i:1507 ms:i:1507 np:i:273 da:i:0 do:i:0 cg:Z:273M cs:Z::273 +NC_000962.3 miniprot mRNA 300834 301655 1507 - . ID=MP000226;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53671|O53671_MYCTU 1 273 +NC_000962.3 miniprot CDS 300837 301655 1507 - 0 Parent=MP000226;Rank=1;Identity=1.0000;Target=tr|O53671|O53671_MYCTU 1 273 +NC_000962.3 miniprot stop_codon 300834 300836 0 - 0 Parent=MP000226;Rank=1 +##PAF tr|O53711|O53711_MYCTU 380 0 380 - NC_000962.3 699930 453232 454372 1140 1140 0 AS:i:1939 ms:i:1939 np:i:380 da:i:0 do:i:0 cg:Z:380M cs:Z::380 +NC_000962.3 miniprot mRNA 453230 454372 1939 - . ID=MP000227;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53711|O53711_MYCTU 1 380 +NC_000962.3 miniprot CDS 453233 454372 1939 - 0 Parent=MP000227;Rank=1;Identity=1.0000;Target=tr|O53711|O53711_MYCTU 1 380 +NC_000962.3 miniprot stop_codon 453230 453232 0 - 0 Parent=MP000227;Rank=1 +##PAF tr|O53726|O53726_MYCTU 311 0 311 - NC_000962.3 699930 527381 528314 933 933 0 AS:i:1610 ms:i:1610 np:i:311 da:i:0 do:i:0 cg:Z:311M cs:Z::311 +NC_000962.3 miniprot mRNA 527379 528314 1610 - . ID=MP000228;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53726|O53726_MYCTU 1 311 +NC_000962.3 miniprot CDS 527382 528314 1610 - 0 Parent=MP000228;Rank=1;Identity=1.0000;Target=tr|O53726|O53726_MYCTU 1 311 +NC_000962.3 miniprot stop_codon 527379 527381 0 - 0 Parent=MP000228;Rank=1 +##PAF tr|O53762|O53762_MYCTU 486 0 486 - NC_000962.3 699930 656012 657470 1458 1458 0 AS:i:2596 ms:i:2596 np:i:486 da:i:0 do:i:0 cg:Z:486M cs:Z::486 +NC_000962.3 miniprot mRNA 656010 657470 2596 - . ID=MP000229;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53762|O53762_MYCTU 1 486 +NC_000962.3 miniprot CDS 656013 657470 2596 - 0 Parent=MP000229;Rank=1;Identity=1.0000;Target=tr|O53762|O53762_MYCTU 1 486 +NC_000962.3 miniprot stop_codon 656010 656012 0 - 0 Parent=MP000229;Rank=1 +##PAF tr|O86342|O86342_MYCTU 206 0 206 - NC_000962.3 699930 329707 330325 615 618 0 AS:i:1058 ms:i:1058 np:i:206 da:i:399 do:i:0 cg:Z:206M cs:Z:*gtgM:205 +NC_000962.3 miniprot mRNA 329705 330325 1058 - . ID=MP000230;Rank=1;Identity=0.9951;Positive=1.0000;Target=tr|O86342|O86342_MYCTU 1 206 +NC_000962.3 miniprot CDS 329708 330325 1058 - 0 Parent=MP000230;Rank=1;Identity=0.9951;Target=tr|O86342|O86342_MYCTU 1 206 +NC_000962.3 miniprot stop_codon 329705 329707 0 - 0 Parent=MP000230;Rank=1 +##PAF tr|P95224|P95224_MYCTU 463 0 463 + NC_000962.3 699930 321330 322719 1389 1389 0 AS:i:2402 ms:i:2402 np:i:463 da:i:0 do:i:0 cg:Z:463M cs:Z::463 +NC_000962.3 miniprot mRNA 321331 322722 2402 + . ID=MP000231;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95224|P95224_MYCTU 1 463 +NC_000962.3 miniprot CDS 321331 322719 2402 + 0 Parent=MP000231;Rank=1;Identity=1.0000;Target=tr|P95224|P95224_MYCTU 1 463 +NC_000962.3 miniprot stop_codon 322720 322722 0 + 0 Parent=MP000231;Rank=1 +##PAF tr|P96258|P96258_MYCTU 439 0 439 - NC_000962.3 699930 498302 499619 1314 1317 0 AS:i:2167 ms:i:2167 np:i:439 da:i:-1 do:i:0 cg:Z:439M cs:Z:*gtgM:438 +NC_000962.3 miniprot mRNA 498300 499619 2167 - . ID=MP000232;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|P96258|P96258_MYCTU 1 439 +NC_000962.3 miniprot CDS 498303 499619 2167 - 0 Parent=MP000232;Rank=1;Identity=0.9977;Target=tr|P96258|P96258_MYCTU 1 439 +NC_000962.3 miniprot stop_codon 498300 498302 0 - 0 Parent=MP000232;Rank=1 +##PAF tr|P96277|P96277_MYCTU 164 0 164 + NC_000962.3 699930 519072 519564 489 492 0 AS:i:799 ms:i:799 np:i:164 da:i:-1 do:i:0 cg:Z:164M cs:Z:*gtgM:163 +NC_000962.3 miniprot mRNA 519073 519567 799 + . ID=MP000233;Rank=1;Identity=0.9939;Positive=1.0000;Target=tr|P96277|P96277_MYCTU 1 164 +NC_000962.3 miniprot CDS 519073 519564 799 + 0 Parent=MP000233;Rank=1;Identity=0.9939;Target=tr|P96277|P96277_MYCTU 1 164 +NC_000962.3 miniprot stop_codon 519565 519567 0 + 0 Parent=MP000233;Rank=1 +##PAF tr|P96400|P96400_MYCTU 442 0 442 + NC_000962.3 699930 260923 262249 1326 1326 0 AS:i:2302 ms:i:2302 np:i:442 da:i:0 do:i:0 cg:Z:442M cs:Z::442 +NC_000962.3 miniprot mRNA 260924 262252 2302 + . ID=MP000234;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96400|P96400_MYCTU 1 442 +NC_000962.3 miniprot CDS 260924 262249 2302 + 0 Parent=MP000234;Rank=1;Identity=1.0000;Target=tr|P96400|P96400_MYCTU 1 442 +NC_000962.3 miniprot stop_codon 262250 262252 0 + 0 Parent=MP000234;Rank=1 +##PAF sp|P9WH49|RS181_MYCTU 84 0 84 + NC_000962.3 699930 59121 59373 252 252 0 AS:i:426 ms:i:426 np:i:84 da:i:0 do:i:0 cg:Z:84M cs:Z::84 +NC_000962.3 miniprot mRNA 59122 59376 426 + . ID=MP000235;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WH49|RS181_MYCTU 1 84 +NC_000962.3 miniprot CDS 59122 59373 426 + 0 Parent=MP000235;Rank=1;Identity=1.0000;Target=sp|P9WH49|RS181_MYCTU 1 84 +NC_000962.3 miniprot stop_codon 59374 59376 0 + 0 Parent=MP000235;Rank=1 +##PAF sp|P9WHB1|RL28A_MYCTU 94 0 94 - NC_000962.3 699930 123982 124264 282 282 0 AS:i:482 ms:i:482 np:i:94 da:i:0 do:i:0 cg:Z:94M cs:Z::94 +NC_000962.3 miniprot mRNA 123980 124264 482 - . ID=MP000236;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WHB1|RL28A_MYCTU 1 94 +NC_000962.3 miniprot CDS 123983 124264 482 - 0 Parent=MP000236;Rank=1;Identity=1.0000;Target=sp|P9WHB1|RL28A_MYCTU 1 94 +NC_000962.3 miniprot stop_codon 123980 123982 0 - 0 Parent=MP000236;Rank=1 +##PAF sp|P9WHC1|RL22_MYCTU 197 97 185 + NC_000962.3 699930 566096 566363 108 285 0 AS:i:100 ms:i:83 np:i:42 da:i:300 do:i:30 cg:Z:42M7D11M1I7M2I8M3I14M cs:Z::1*ggtA*gagQ*gccG*gctR*ctaA*gagF:1*ctgI:1*agcR*cagR*cagT:1*ttcH*gagI*gaaT:1*tcgV*gcgV*cgcE*gccS*gaaR*ggcP*tacA*gtgK:2*gcgR*gtgS*gagA*ttgK*accS*cagS*gagR:1*ttgR*ggtR:1*gtcE:2-cagacccgcgcggtcggtgag*cgtK:2*aagS*ctgK:2*atcA*gagT*ctgA:1+A:4*ccgA*gccK*aagA+PA:1*gccK:3*aagS*aagS*gccG+VKK*gctT:5*gcgP:7 +NC_000962.3 miniprot mRNA 566097 566363 83 + . ID=MP000237;Rank=1;Identity=0.3789;Positive=0.4421;Target=sp|P9WHC1|RL22_MYCTU 98 185 +NC_000962.3 miniprot CDS 566097 566363 83 + 0 Parent=MP000237;Rank=1;Identity=0.3789;Target=sp|P9WHC1|RL22_MYCTU 98 185 +##PAF sp|P9WHX1|PPE66_MYCTU 315 0 315 + NC_000962.3 699930 339642 340962 435 1077 0 AS:i:457 ms:i:499 np:i:188 da:i:48 do:i:9 cg:Z:88M20D13M2D3M2D12M4D23M10D8M2D46M1I25M1D34M249U52M3D9M cs:Z:*gtgM*gccT*gcgT:2*acgA*accS:1*gtgL:6*gtcT:7*cttS:1*gggA:2*gtgL*gcgG:22*acgI:3*agcT:2*gcgS*accI:1*caaE*gcgG*gtcT*gccS*gagD:2*gtgL:10*ccgV*atcL*ttgF*gcaN*gccG*gaaG:1*gccG-gacgatgaccacgatcatgaccacgatcacgggggcgaaccgaccccgctggactatctg:2*gagS*ataA:1*cgcP*atcA:2*ggtA*gggA*cgcT:1-atctgg:3-gagggc*accS*atgI*aacI:2*ccgI*ttcI:1*gatI*tatL*acgI*gacQ-gcagcccaacca*atcL*tggF*tggL*gttI*gttS*cgtL*gccE:1*gaaL:1*agtA*aagI*gacV*tttA*gaaY:1*tttI*gttI*cagI*gaaV:1*tttI*gtcL-aatccggtggaggcatttcagttctacttt*gagP:1*ctaV*ttgI:1*gacA:1*ccgA-acccac:2*cagF*attA:1*gagL:1*ttgI*agcI*cagF*tccG:1*cagP:2*gcgV*gtcI:1*ctcS*ggtP*tccF:1*atcL*tccT*aacG*ttgS*ggtV*gcgI*gtgA*accV*gggP*ttcT*gccS*gggL*ctaS*tccT*ggcS:1*gccS*ggcT*atgA*cagV:1*gcgI*gctG*atcV+G*ccgQ*gcgY:2*cccD*gtcL:1*gcgS:1*ccgD*tcgA*acaQ*ttgA*ccgI*gcgE:1*gcgG*atgL*gccK*ccgT*accA*atgD*gccV:2-ggc*gcgV:2*gcgR*tcgP:4*gcgP*tccL*gcgR*ccgE*gcgS:1*agcA*acgV*gtgR*gccP*agcE:1*acgR*ccgL*gcaV*ccgS*ccgA*ccgV:2*ggcA*gccP:2*ttcT*gS~gc246ag-tc*acaA:1*acgV*gtgL:7*catV:7*cgcG*aggK:1*gcgS:1*gccG*gacR*gcgP:2*atgL:5*gatG*gatE:2*gacG*gggS:1*acgS*acgV:4*ggtA:2*gatE-ccggaccgg*gatQ*gcgL*cctV:1*tcgA*gcgG:1*cctA:1 +NC_000962.3 miniprot mRNA 339643 340962 499 + . ID=MP000238;Rank=1;Identity=0.4039;Positive=0.5237;Target=sp|P9WHX1|PPE66_MYCTU 1 315 +NC_000962.3 miniprot CDS 339643 340522 324 + 0 Parent=MP000238;Rank=1;Identity=0.3695;Donor=GC;Target=sp|P9WHX1|PPE66_MYCTU 1 253 +NC_000962.3 miniprot CDS 340769 340962 175 + 2 Parent=MP000238;Rank=1;Identity=0.5625;Target=sp|P9WHX1|PPE66_MYCTU 254 315 +##PAF sp|P9WIF3|PG34_MYCTU 515 0 515 - NC_000962.3 699930 333507 339073 930 1599 0 AS:i:1245 ms:i:1299 np:i:346 da:i:0 do:i:3 cg:Z:91M1D31M2D31M3D20M2D26M1I14M1I18M1I12M1I23M6I13M3009U28M3D8M1D8M5D16M1I11M1I17M1I17M1I2M1017N25M4I30M1G28M1D26M cs:Z::4*attV:5*atcV*gcgV:3*acgS:3*agtG*ctcI*gagG:1*agcA:1*gccG:7*gccV*aacP:1*acaM*gcaG*ctgV:9*acgA:3*gcgD:5*ggcA:10*cagA*gcgL:2*gccE:3*cagH:1*ttgM:1*tccA:1*ggcA:4*gccG:2-gcc:2*accD*tcgA*ccgA*ctgA:1*gccD*ccgV*atcL:1*gagG*ttcP:1*ctgQ:1*aatL*accF:6*aacD:1*accA:4-ggcacc:1*gccQ*aatP:2*gacP:2*tggL:1*atcY:4*gccN:2*tccN:1*gcgG*gccI:1*gtcQ*aacP:5*aacD-ggcggcgcc*ggcA:7*gccN:2*gccI:2*aggP*gccG*agcA:2*accL-ggcggc:6*gccV*gccG:1*atgL:3*gccD*gccG:1*gtcN:2*cccA:2*ttcL*gcaG*gccT*gctG+P*ttcV:5*gccI:2*gccP:2*aacA*ggcA+V:3*gccG*gacH:2*gtcA:5*gcaL*accG*gacK:2+F*accA:5*tccT:2*aacT:2+L:1*ttcY:1*gccN:2*accN:2*cccN*ggcV*ggaP*ttcS:1*atcA*tttA*ggcD:6+ARLIGN:2*tctD:2*ctgS*ttcV:2*ggcA*ggcP:2*gI~gt3006ag-gc:1*gccN:2*gccN:3*gctG:1*ctgW:1*ttcY:1*tccD:5*gccS*ggcT*ggaL*ttcQ:2*gccS:1-ggcgggcaa:2*cccT:5-acg*gtcM:2*tccD:2*gccN:1-ggcaacggcggagtt:1*cagF*ggcS:1*gccF*ggcD:1*atcN:2*gctD:3*cccG:1+T:6*aacD:3*ggtS+V*ggcQ*gccT*agcD*gcgG*gtgF*accL*ggcR:1*aacH:2*atcD:2*accN*ggcA:1+G:6*aacA:2*agcA:1*gggS*attA:1*gcgT:1*aagV+F:1*ggaP~gt1017ag*caaG:2*gccS:2*gccN:4*ggcA:2*ttcV:1*tccN*gccG:4*gccS:2+PTQI*agcP*ggtS*gccV*aacA*gctV*ctaP*ggcV*gccT:1*accA:5*gacN:2*cacT:2*gtgL*ttcI:4*gacN:2*tA:2*gggV*tttS:1*gccD:2*ggcP:1*agcT:2*gtcN:2*aacY:1*gtgQ:3*aacD:2*aacD:2-aac*gccP:1*aaaD*gccS:1*gccG*acgP*cccG:1*gccS:5*ctgT:1*ctcA:1*gagQ:2*ctcS*aacP:1*ttgG +NC_000962.3 miniprot mRNA 333508 339073 1299 - . ID=MP000239;Rank=1;Identity=0.5816;Positive=0.6492;Frameshift=1;Target=sp|P9WIF3|PG34_MYCTU 1 515 +NC_000962.3 miniprot CDS 338212 339073 777 - 0 Parent=MP000239;Rank=1;Identity=0.6074;Target=sp|P9WIF3|PG34_MYCTU 1 289 +NC_000962.3 miniprot CDS 334856 335205 243 - 2 Parent=MP000239;Rank=1;Identity=0.5417;Target=sp|P9WIF3|PG34_MYCTU 290 401 +NC_000962.3 miniprot CDS 333508 333838 279 - 0 Parent=MP000239;Rank=1;Identity=0.5565;Frameshift=1;Target=sp|P9WIF3|PG34_MYCTU 402 515 +##PAF sp|P9WKT1|Y502_MYCTU 358 0 358 + NC_000962.3 699930 592790 593864 1074 1074 0 AS:i:1842 ms:i:1842 np:i:358 da:i:0 do:i:0 cg:Z:358M cs:Z::358 +NC_000962.3 miniprot mRNA 592791 593867 1842 + . ID=MP000240;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKT1|Y502_MYCTU 1 358 +NC_000962.3 miniprot CDS 592791 593864 1842 + 0 Parent=MP000240;Rank=1;Identity=1.0000;Target=sp|P9WKT1|Y502_MYCTU 1 358 +NC_000962.3 miniprot stop_codon 593865 593867 0 + 0 Parent=MP000240;Rank=1 +##PAF sp|P9WKV7|Y479_MYCTU 348 0 348 - NC_000962.3 699930 567923 568967 1041 1044 0 AS:i:1780 ms:i:1780 np:i:348 da:i:-1 do:i:0 cg:Z:348M cs:Z:*gtgM:347 +NC_000962.3 miniprot mRNA 567921 568967 1780 - . ID=MP000241;Rank=1;Identity=0.9971;Positive=1.0000;Target=sp|P9WKV7|Y479_MYCTU 1 348 +NC_000962.3 miniprot CDS 567924 568967 1780 - 0 Parent=MP000241;Rank=1;Identity=0.9971;Target=sp|P9WKV7|Y479_MYCTU 1 348 +NC_000962.3 miniprot stop_codon 567921 567923 0 - 0 Parent=MP000241;Rank=1 +##PAF sp|P9WM77|Y057_MYCTU 173 0 173 + NC_000962.3 699930 59895 60414 519 519 0 AS:i:908 ms:i:908 np:i:173 da:i:0 do:i:0 cg:Z:173M cs:Z::173 +NC_000962.3 miniprot mRNA 59896 60417 908 + . ID=MP000242;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM77|Y057_MYCTU 1 173 +NC_000962.3 miniprot CDS 59896 60414 908 + 0 Parent=MP000242;Rank=1;Identity=1.0000;Target=sp|P9WM77|Y057_MYCTU 1 173 +NC_000962.3 miniprot stop_codon 60415 60417 0 + 0 Parent=MP000242;Rank=1 +##PAF sp|P9WMG9|Y043_MYCTU 244 0 244 - NC_000962.3 699930 47368 48100 732 732 0 AS:i:1267 ms:i:1267 np:i:244 da:i:0 do:i:0 cg:Z:244M cs:Z::244 +NC_000962.3 miniprot mRNA 47366 48100 1267 - . ID=MP000243;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMG9|Y043_MYCTU 1 244 +NC_000962.3 miniprot CDS 47369 48100 1267 - 0 Parent=MP000243;Rank=1;Identity=1.0000;Target=sp|P9WMG9|Y043_MYCTU 1 244 +NC_000962.3 miniprot stop_codon 47366 47368 0 - 0 Parent=MP000243;Rank=1 +##PAF sp|P9WMV3|GMHBA_MYCTU 190 0 190 + NC_000962.3 699930 137940 138510 570 570 0 AS:i:1009 ms:i:1009 np:i:190 da:i:0 do:i:0 cg:Z:190M cs:Z::190 +NC_000962.3 miniprot mRNA 137941 138513 1009 + . ID=MP000244;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMV3|GMHBA_MYCTU 1 190 +NC_000962.3 miniprot CDS 137941 138510 1009 + 0 Parent=MP000244;Rank=1;Identity=1.0000;Target=sp|P9WMV3|GMHBA_MYCTU 1 190 +NC_000962.3 miniprot stop_codon 138511 138513 0 + 0 Parent=MP000244;Rank=1 +##PAF sp|P9WQ59|FAA28_MYCTU 580 0 580 + NC_000962.3 699930 483976 485725 810 1767 0 AS:i:1223 ms:i:1223 np:i:353 da:i:0 do:i:6 cg:Z:5M3I56M3D81M2I17M2D199M2D15M1D45M1D71M1I85M cs:Z::3*ataR:1+LPA*acgA:2*gacA*cgtC:1*accR*acgL*actQ:1*agcH:1*gaaP:2*gtgT:4*gacE*acaQ*aaaD*accW*ggcD*gacG*caaV*attA*gacI*cgaT*atgL:6*tctR:1*gtcT*accL*gccN:1*tctA*gcgQ*tatE:1*ataS*agtR*tatC:1*cggS*catT*gctG:2-cgaaggacc*gcaV*gcgV:7*gacE:2*gcaV*ggaA:5*tgcQ:2*tggR*acgI*ccgA:3*ccaS*gaaV:1*ctgQ:1*agcG*ctaV*cgcT:1*aagE:1*actS*ggaD*ctgS*gctV*gtaL*ctcS:1*tgtS*gccS*gccP*gacV*gtcA*gtgI:4*caaS:1*gaaV*acgD*cggD:1*aggV*gccQ*acgH*ataV:1*acaR*catR*gggP*gcgG*tctE*gtaS*actP*acgP*ccgS*gtcI:1*gcgE*ttgV:1+LL*acaD:2*gagA:1*tccN:1*gatY*aacT*tgtF*gatK*ctcE:1*tctE*caaY*ctaP:1-gactgg*agtT*tcgA:9*gccR*aacT:1*cgtA:3*ttaM:1*atgH*cgtQ:2*acgR*gaaV:1*gtcF*gacE:1*attL*atcM*cgtS*aacG:2*cgcA*catD*gagT*ggcD:1*gcgI:1*aggP*ttgP*cccN:1*tcgA*gtcL:5*cttF:6*atgV*gttI:1*ctcI*tttC*attA:1*ttgI*tttL*gtcG:1*tgtY:1*gttA*atcV:4*gagV*gcaS:1*atcL*cgtQ*aagR:5*caaH:1*cttM:1*aaaS*cacD*cagF*gcgH*ccaA:9*gatE:2*gtcA*gctR*aaaR:1*tccT*gaaD*gagD:4*ctgR:3*cacN*gtaI*aatL:2*atcL*aacS:1*gcgS:1*cagR:2*ccaA*aatA:2*accK*aaaR:1*ctcA*cgcD:2*cgtA*cccR*tacF:2*atgQ*cccE*gcaR*gcgV*gtcI*aagR:4*atgL:3*gtgT:2*ctgV:2*acgS:1*gcgP:1*tcaQ:2*acgE*tcaT*accV*gagD:2*gctT*gatE:2*gctS*cgaA:3*gagK-ctaagt*actP*ttcC*gaaA*actG*gagG*cgtG:2*cgtS:2*cgcS:1*cacM*agcL-gac*gacP*aagR*gaaS:1*ttgI*cttV:4*ccgS:1*tcgT*aatC:2*ctcC*ggaP*ccgD:1*cgtT*atcV:4*attV:2*aagD:2*tctA*accN:2*cacW*aatQ*gcaK*gacP:1*gcgE*ctcS*aatE:1-gat*aagT:1*cagG*gccG*agcK:1*cggV*gagT*gccP:1*gcgP:3*aggE*tcgG:7*ttgS:2*ataV*gtaT*ggaD*gatG*gagK*ttcM*tacF:1*gtcI:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatS:5*actA:1*gtcI*aagQ:1*tttI:1*ggtR:2*gtcC:2*tttI:2+P*tccG:1*gacR*gggS*gtgT:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagR*catG*gggD*cccS:1*aaaQ*gtgD*actA*attM*atgA*gatR*ttcL*tcgG*acgA:3*ctgE:1*gtaT:4*aaaS*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgA:2*gcgS*ctaI:1*aagI:5*attV*agcR:1*gcgG:2*gcaV*aagE:2*ggaR*gcaQ*aatD*aagQ*ttgF*caaA:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483977 485725 1223 + . ID=MP000245;Rank=1;Identity=0.4584;Positive=0.5993;Target=sp|P9WQ59|FAA28_MYCTU 1 580 +NC_000962.3 miniprot CDS 483977 485725 1223 + 0 Parent=MP000245;Rank=1;Identity=0.4584;Target=sp|P9WQ59|FAA28_MYCTU 1 580 +##PAF sp|P9WQN9|A85C_MYCTU 340 0 340 - NC_000962.3 699930 156580 157600 1020 1020 0 AS:i:1840 ms:i:1840 np:i:340 da:i:0 do:i:0 cg:Z:340M cs:Z::340 +NC_000962.3 miniprot mRNA 156578 157600 1840 - . ID=MP000246;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WQN9|A85C_MYCTU 1 340 +NC_000962.3 miniprot CDS 156581 157600 1840 - 0 Parent=MP000246;Rank=1;Identity=1.0000;Target=sp|P9WQN9|A85C_MYCTU 1 340 +NC_000962.3 miniprot stop_codon 156578 156580 0 - 0 Parent=MP000246;Rank=1 +##PAF tr|Q79G13|Q79G13_MYCTU 380 0 380 + NC_000962.3 699930 65551 66691 1140 1140 0 AS:i:2002 ms:i:2002 np:i:380 da:i:0 do:i:0 cg:Z:380M cs:Z::380 +NC_000962.3 miniprot mRNA 65552 66694 2002 + . ID=MP000247;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q79G13|Q79G13_MYCTU 1 380 +NC_000962.3 miniprot CDS 65552 66691 2002 + 0 Parent=MP000247;Rank=1;Identity=1.0000;Target=tr|Q79G13|Q79G13_MYCTU 1 380 +NC_000962.3 miniprot stop_codon 66692 66694 0 + 0 Parent=MP000247;Rank=1 +##PAF tr|I6X961|I6X961_MYCTU 174 0 174 + NC_000962.3 699930 552025 552547 519 522 0 AS:i:923 ms:i:923 np:i:174 da:i:-1 do:i:0 cg:Z:174M cs:Z:*gtgM:173 +NC_000962.3 miniprot mRNA 552026 552550 923 + . ID=MP000248;Rank=1;Identity=0.9943;Positive=1.0000;Target=tr|I6X961|I6X961_MYCTU 1 174 +NC_000962.3 miniprot CDS 552026 552547 923 + 0 Parent=MP000248;Rank=1;Identity=0.9943;Target=tr|I6X961|I6X961_MYCTU 1 174 +NC_000962.3 miniprot stop_codon 552548 552550 0 + 0 Parent=MP000248;Rank=1 +##PAF tr|I6XUD2|I6XUD2_MYCTU 159 0 159 + NC_000962.3 699930 89923 90400 477 477 0 AS:i:823 ms:i:823 np:i:159 da:i:0 do:i:0 cg:Z:159M cs:Z::159 +NC_000962.3 miniprot mRNA 89924 90403 823 + . ID=MP000249;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6XUD2|I6XUD2_MYCTU 1 159 +NC_000962.3 miniprot CDS 89924 90400 823 + 0 Parent=MP000249;Rank=1;Identity=1.0000;Target=tr|I6XUD2|I6XUD2_MYCTU 1 159 +NC_000962.3 miniprot stop_codon 90401 90403 0 + 0 Parent=MP000249;Rank=1 +##PAF tr|I6Y340|I6Y340_MYCTU 337 0 337 + NC_000962.3 699930 258912 259923 1008 1011 0 AS:i:1769 ms:i:1769 np:i:337 da:i:-1 do:i:0 cg:Z:337M cs:Z:*gtgM:336 +NC_000962.3 miniprot mRNA 258913 259926 1769 + . ID=MP000250;Rank=1;Identity=0.9970;Positive=1.0000;Target=tr|I6Y340|I6Y340_MYCTU 1 337 +NC_000962.3 miniprot CDS 258913 259923 1769 + 0 Parent=MP000250;Rank=1;Identity=0.9970;Target=tr|I6Y340|I6Y340_MYCTU 1 337 +NC_000962.3 miniprot stop_codon 259924 259926 0 + 0 Parent=MP000250;Rank=1 +##PAF tr|O07173|O07173_MYCTU 122 0 122 + NC_000962.3 699930 148855 149221 366 366 0 AS:i:601 ms:i:601 np:i:122 da:i:0 do:i:0 cg:Z:122M cs:Z::122 +NC_000962.3 miniprot mRNA 148856 149224 601 + . ID=MP000251;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07173|O07173_MYCTU 1 122 +NC_000962.3 miniprot CDS 148856 149221 601 + 0 Parent=MP000251;Rank=1;Identity=1.0000;Target=tr|O07173|O07173_MYCTU 1 122 +NC_000962.3 miniprot stop_codon 149222 149224 0 + 0 Parent=MP000251;Rank=1 +##PAF tr|O07254|O07254_MYCTU 246 0 246 - NC_000962.3 699930 395349 396087 738 738 0 AS:i:1232 ms:i:1232 np:i:246 da:i:0 do:i:0 cg:Z:246M cs:Z::246 +NC_000962.3 miniprot mRNA 395347 396087 1232 - . ID=MP000252;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07254|O07254_MYCTU 1 246 +NC_000962.3 miniprot CDS 395350 396087 1232 - 0 Parent=MP000252;Rank=1;Identity=1.0000;Target=tr|O07254|O07254_MYCTU 1 246 +NC_000962.3 miniprot stop_codon 395347 395349 0 - 0 Parent=MP000252;Rank=1 +##PAF tr|O53715|O53715_MYCTU 183 0 183 - NC_000962.3 699930 456270 456819 546 549 0 AS:i:951 ms:i:951 np:i:183 da:i:99 do:i:0 cg:Z:183M cs:Z:*gtgM:182 +NC_000962.3 miniprot mRNA 456268 456819 951 - . ID=MP000253;Rank=1;Identity=0.9945;Positive=1.0000;Target=tr|O53715|O53715_MYCTU 1 183 +NC_000962.3 miniprot CDS 456271 456819 951 - 0 Parent=MP000253;Rank=1;Identity=0.9945;Target=tr|O53715|O53715_MYCTU 1 183 +NC_000962.3 miniprot stop_codon 456268 456270 0 - 0 Parent=MP000253;Rank=1 +##PAF sp|O53779|VPC26_MYCTU 135 0 135 + NC_000962.3 699930 677921 678326 402 405 0 AS:i:667 ms:i:667 np:i:135 da:i:-1 do:i:0 cg:Z:135M cs:Z:*gtgM:134 +NC_000962.3 miniprot mRNA 677922 678329 667 + . ID=MP000254;Rank=1;Identity=0.9926;Positive=1.0000;Target=sp|O53779|VPC26_MYCTU 1 135 +NC_000962.3 miniprot CDS 677922 678326 667 + 0 Parent=MP000254;Rank=1;Identity=0.9926;Target=sp|O53779|VPC26_MYCTU 1 135 +NC_000962.3 miniprot stop_codon 678327 678329 0 + 0 Parent=MP000254;Rank=1 +##PAF sp|P0CW29|VAPB1_MYCTU 79 0 79 + NC_000962.3 699930 71588 71825 237 237 0 AS:i:381 ms:i:381 np:i:79 da:i:0 do:i:0 cg:Z:79M cs:Z::79 +NC_000962.3 miniprot mRNA 71589 71828 381 + . ID=MP000255;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P0CW29|VAPB1_MYCTU 1 79 +NC_000962.3 miniprot CDS 71589 71825 381 + 0 Parent=MP000255;Rank=1;Identity=1.0000;Target=sp|P0CW29|VAPB1_MYCTU 1 79 +NC_000962.3 miniprot stop_codon 71826 71828 0 + 0 Parent=MP000255;Rank=1 +##PAF tr|P95197|P95197_MYCTU 419 0 419 + NC_000962.3 699930 468334 469591 1254 1257 0 AS:i:2107 ms:i:2107 np:i:419 da:i:-1 do:i:0 cg:Z:419M cs:Z:*gtgM:418 +NC_000962.3 miniprot mRNA 468335 469594 2107 + . ID=MP000256;Rank=1;Identity=0.9976;Positive=1.0000;Target=tr|P95197|P95197_MYCTU 1 419 +NC_000962.3 miniprot CDS 468335 469591 2107 + 0 Parent=MP000256;Rank=1;Identity=0.9976;Target=tr|P95197|P95197_MYCTU 1 419 +NC_000962.3 miniprot stop_codon 469592 469594 0 + 0 Parent=MP000256;Rank=1 +##PAF tr|P96265|P96265_MYCTU 498 0 498 + NC_000962.3 699930 505085 506579 1494 1494 0 AS:i:2589 ms:i:2589 np:i:498 da:i:0 do:i:0 cg:Z:498M cs:Z::498 +NC_000962.3 miniprot mRNA 505086 506582 2589 + . ID=MP000257;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96265|P96265_MYCTU 1 498 +NC_000962.3 miniprot CDS 505086 506579 2589 + 0 Parent=MP000257;Rank=1;Identity=1.0000;Target=tr|P96265|P96265_MYCTU 1 498 +NC_000962.3 miniprot stop_codon 506580 506582 0 + 0 Parent=MP000257;Rank=1 +##PAF sp|P9WG75|THIE_MYCTU 222 0 222 - NC_000962.3 699930 500352 501018 663 666 0 AS:i:1129 ms:i:1129 np:i:222 da:i:-1 do:i:0 cg:Z:222M cs:Z:*gtgM:221 +NC_000962.3 miniprot mRNA 500350 501018 1129 - . ID=MP000258;Rank=1;Identity=0.9955;Positive=1.0000;Target=sp|P9WG75|THIE_MYCTU 1 222 +NC_000962.3 miniprot CDS 500353 501018 1129 - 0 Parent=MP000258;Rank=1;Identity=0.9955;Target=sp|P9WG75|THIE_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 500350 500352 0 - 0 Parent=MP000258;Rank=1 +##PAF sp|P9WGJ3|SERB1_MYCTU 308 0 308 - NC_000962.3 699930 595466 596390 924 924 0 AS:i:1555 ms:i:1555 np:i:308 da:i:0 do:i:0 cg:Z:308M cs:Z::308 +NC_000962.3 miniprot mRNA 595464 596390 1555 - . ID=MP000259;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGJ3|SERB1_MYCTU 1 308 +NC_000962.3 miniprot CDS 595467 596390 1555 - 0 Parent=MP000259;Rank=1;Identity=1.0000;Target=sp|P9WGJ3|SERB1_MYCTU 1 308 +NC_000962.3 miniprot stop_codon 595464 595466 0 - 0 Parent=MP000259;Rank=1 +##PAF sp|P9WI47|PPE02_MYCTU 556 0 556 - NC_000962.3 699930 307879 309547 1668 1668 0 AS:i:2882 ms:i:2882 np:i:556 da:i:0 do:i:0 cg:Z:556M cs:Z::556 +NC_000962.3 miniprot mRNA 307877 309547 2882 - . ID=MP000260;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI47|PPE02_MYCTU 1 556 +NC_000962.3 miniprot CDS 307880 309547 2882 - 0 Parent=MP000260;Rank=1;Identity=1.0000;Target=sp|P9WI47|PPE02_MYCTU 1 556 +NC_000962.3 miniprot stop_codon 307877 307879 0 - 0 Parent=MP000260;Rank=1 +##PAF sp|P9WJY1|Y037_MYCTU 441 0 441 - NC_000962.3 699930 39879 41202 1320 1323 0 AS:i:2207 ms:i:2207 np:i:441 da:i:207 do:i:0 cg:Z:441M cs:Z:*gtgM:440 +NC_000962.3 miniprot mRNA 39877 41202 2207 - . ID=MP000261;Rank=1;Identity=0.9977;Positive=1.0000;Target=sp|P9WJY1|Y037_MYCTU 1 441 +NC_000962.3 miniprot CDS 39880 41202 2207 - 0 Parent=MP000261;Rank=1;Identity=0.9977;Target=sp|P9WJY1|Y037_MYCTU 1 441 +NC_000962.3 miniprot stop_codon 39877 39879 0 - 0 Parent=MP000261;Rank=1 +##PAF sp|P9WLQ5|Y1945_MYCTU 454 0 454 - NC_000962.3 699930 103715 105101 900 1387 0 AS:i:1506 ms:i:1506 np:i:352 da:i:0 do:i:3 cg:Z:97M2G38M1F194M8D124M cs:Z::1*ttaR*gcgS*aatD*agcT:3*cttI*gtcS*gagA*gtcA*ttcL:2*ctgY*gatH:1*gacS:1*gacS:1*ttgV*gacL*gagD*gtgL*tccK*tttC*gagD*gtgA:1*agcT:3*cggL:1*cggA*tctC:1*gaaQ:3*tgcV*ttgE*gcgR:2*ctaQ*ccgG:2*cagE:1*acgA:5*gacA*accG:2*agcC:8*tgcR*tgcT:6*cgcH:2*aagP*cccG:2*ggcS:2*agcI:3*aagE*ccD:2*caaE:9*gccP*ccgA:6*accA:3*cagE:1*ctgK:2*gagR*gcgE:1*gtcI:1*gtgE:1*cgcQ:1-c:2*gccK*cacE:1*cccS:4*gtgL*tccG*accI:1*cagE:4*gacQ:2*ggcE*aaaL:1*gctT*caaS*tatR:3*gagH:1*gccH*cgcG*tacL:1*cagT*cggQ*gtcL:8*gacN*ctcF*accS:1*accQ:9*ctgM*agcG*aacK:1*caaE*tacF:5*ctaI:2*tacL:3*caaE*gcgL:3*tttI:12*accC:4*cacQ:3*atcV:1*accD:4*gccD:1*atcV*gacR:9*aacH:9*gcgG:1*atcL:3*aaaE:4*aacR:4*tcgT*atcV:2*accS:3*accK*gacE:1*caaE*accA*ggcA*gccT:3*ttcV:4*accS*ctgR*ctaV:2*gccS:1*gtgL:3*accA:1*cacN:4-tcccccgcaagcgggaggtacccc*cagL:1*atcL:2*cacG*ggcA*acaK:19*ttcY:1*aacK:4*accS*aaaR:10*caaE*gccV:4*gccP:2*agcT:1*ggaH:4*accN*gagD:11*gccV:4*accK:1*cacR*aacK:1*accA*cacK:1*cacD:6*cccA:8*accI:1*accR*ttcY:4*cgaK*ttcI:1*cacC*aacE*caaP:3*gacE*aaaP*cccH +NC_000962.3 miniprot mRNA 103716 105101 1506 - . ID=MP000262;Rank=1;Identity=0.6489;Positive=0.7614;Frameshift=2;Target=sp|P9WLQ5|Y1945_MYCTU 1 454 +NC_000962.3 miniprot CDS 103716 105101 1506 - 0 Parent=MP000262;Rank=1;Identity=0.6489;Frameshift=2;Target=sp|P9WLQ5|Y1945_MYCTU 1 454 +##PAF sp|P9WM93|Y034_MYCTU 131 0 131 + NC_000962.3 699930 36866 37259 393 393 0 AS:i:659 ms:i:659 np:i:131 da:i:0 do:i:0 cg:Z:131M cs:Z::131 +NC_000962.3 miniprot mRNA 36867 37262 659 + . ID=MP000263;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM93|Y034_MYCTU 1 131 +NC_000962.3 miniprot CDS 36867 37259 659 + 0 Parent=MP000263;Rank=1;Identity=1.0000;Target=sp|P9WM93|Y034_MYCTU 1 131 +NC_000962.3 miniprot stop_codon 37260 37262 0 + 0 Parent=MP000263;Rank=1 +##PAF sp|P9WPB3|CMAS3_MYCTU 287 0 287 - NC_000962.3 699930 560850 561711 861 861 0 AS:i:1524 ms:i:1524 np:i:287 da:i:0 do:i:0 cg:Z:287M cs:Z::287 +NC_000962.3 miniprot mRNA 560848 561711 1524 - . ID=MP000264;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPB3|CMAS3_MYCTU 1 287 +NC_000962.3 miniprot CDS 560851 561711 1524 - 0 Parent=MP000264;Rank=1;Identity=1.0000;Target=sp|P9WPB3|CMAS3_MYCTU 1 287 +NC_000962.3 miniprot stop_codon 560848 560850 0 - 0 Parent=MP000264;Rank=1 +##PAF sp|P9WPM5|CP137_MYCTU 476 38 476 - NC_000962.3 699930 392731 394024 453 1323 0 AS:i:577 ms:i:577 np:i:220 da:i:21 do:i:33 cg:Z:13M7I32M1D137M1D7M3I211M1D28M cs:Z::1*ctgG:3*ccgL*cggP*ctaA:2*tacG*ctgF*cagR+AAFAAAY*agcA:1*ctgA:2*aggA*tttG*cggG:1*tggR*ttcR*ctgM*ccaL*gcgR*atgL*catI:1*aagR:2*gacP*gtgI*ttcM*tccT*ttgM*cggP*gtgI*cccL*ccaS*tatL*gccG:1-aac*ctcV*gtgA*gtcI*tatV*accS*cgcD*cccS*gaaA*cacL*atcA:2*atcV:1*gcgT:1*gacP*ccgT*aggD*tcgV:1*cacL*gcgG:3*aacV*cacG*atcP*cttA*ggtA*tttA*gtcI*atgY:1*gagS*cacG:1*gtaM*ttgF*atgV*accQ*gacE:1*gccP:2*gcgL:1*atgR:1*tcgK:2*atgT:1*gcgP*ttcL*accH*cgcG:3*cgcD*ggaR:1*cgcV*gacP*atgI:1*gccE*tccN*gttS*gcgT:1*gaaA*cacA*atcM*acgH*cgcT:1*cggP*cccV*cacD*gcaR*acgP*atcF*aacA*agtM:1*gacT*cacV*atgA*aatR*gcgS:1*accM:2*atcV:1*ctgV*cggK:1*gttI:3*actD:2*aaaE*gtcE*aagV*gccR*gagR:1*actG*agtR*cggP*ctgF*caaE*cagR*atcL*ataL:1*atcL*catG*cccV*gcgS*attE*ctcQ*gcgL*ggcT:1*ccgR:1-ccg*tcgA:1*aagR:1*atgL*aatG*cccA+LRV:1*aagP*cgcA*ttcR*ttcA*catR*aacA*caaN:1*aagE:2*gagD*atcV*ctcV*tacM*cgcA*gagL:2*tccQ:2*atcA:1*tccP*gatR:1*accG*gccE:1*accH:4*agaL:1*ttgV*caaS*accA*aagR*gacG*acgE*cctS*actG*aagE*ccgQ:1*accS:1*gccS:1*cttI:2*cagD:4*ctgV:8*gccT*gccT:1*tccA:1*acgA*ttgF*tggD*gaaL:1*gccL:1*gctH:1*gaaD*atcA*caaL*agcR*caaR:1*gtcR*tggA*gctE:4*gacG*gacE*ggaA:1*ttgT*gagT:2*ctcI*aagN:1*ggaT*atgL:1*cgaV*cacR*accP*gtcP*atcA*gctP*tctL:3*aagV*gtcA*accA*gcgQ:1*gcaL*gagT:3*tggY:1*ctgV*ccaE:3*gtgR*gtcI*aacV*acgV*tcgH:1*ctgI*ttgA*gccI*cacN*gccR:1*gagA*gtaE*tcgV*cacY*cccE*aaaH:1*acaH:4*agcE:3*gacG*ggcT*agcR*gtgP*gcaQ*cccT*aacY*accA:1*ctgV:6*cgcK:4*ttcA*gggN:1*gccS*ctcM*accR:1*ggaL*gcgI*gtcT*atcV:1*caaH*gagV*attL*ttcL:1*cgcE*ttcG*accE*atcF:2*gccV-ggc*ccgD*tccD*aaaE*ggcP:1*actR*ccgI*ttgV*gtgR:1*aacS:1*accM*accL:2*aaaR*cacR:1*gcaT*cacR*ctgV:1*ctgF*atcR:1*cagA:1 +NC_000962.3 miniprot mRNA 392732 394024 577 - . ID=MP000265;Rank=1;Identity=0.3424;Positive=0.4989;Target=sp|P9WPM5|CP137_MYCTU 39 476 +NC_000962.3 miniprot CDS 392732 394024 577 - 0 Parent=MP000265;Rank=1;Identity=0.3424;Target=sp|P9WPM5|CP137_MYCTU 39 476 +##PAF sp|P9WQJ9|IRTA_MYCTU 859 599 841 + NC_000962.3 699930 227846 230402 366 750 0 AS:i:535 ms:i:570 np:i:160 da:i:87 do:i:57 cg:Z:145M1D20M1809V7D76M cs:Z:*aagE:2*tcgD*ccgG:2*cggP*ttaA*tcaT*ctgV*gagV:1*cagD*cggH:1*tccT:3*gtgR*gctP*gacG*cgcV:2*ctcI*cgcQ*gagD*ataV:2*tcgT*gtcL:1*gccP:1*gagT*accV*ctgT:1*gtgL:2*gcgP*ccgS:8*tcgT:1*gcgL*acgA:1*tgcF*tacH:2*acaE*cagR:2*gtgI:1*atcV:4*gtgI:1*gagS:1*acgA*ctcA:1*tcgE:1*cggY*tcaT*gccR*atcV:1*ctgF:1*cccL*gaaQ*gatE:1*gtcQ:1*ttcV*tccH:2*atcA*ggtA*gcaE:3*tatL*ggcA*cgcV:3*acgP*cccA:2*attV*gccQ*acgV:3*gcgE:1*cacQ:1*gagH*gagD*ttcR:1*aacL*actR:5*cagD:1*gccV*gtcL:2*cgcN*ggaS-ctg*acgG:4*caaE:3*atcL*gccT*ctgI:3*ctaI:1*cacG*cagD*ccgT*cgP~gt1806ag-g-gcgcgtctggttgaccccgac*attV:1*ctgI:5*gtgA*gccF*ctgA:2*gccE*accS:1*gccY*gtgL:2*cggQ:1*accL*ctcN*accR:1*gcaT*gccR*cgtD:2*accV:1*atcV*gtgI:2*gggR:1*gccH*atcT*gccI*gaaT*cacR:2*cgcQ:4*gagD:2*accR*gttI:2*gacR:1*gccT:1*accE:7*cacR:1*tcgC:3 +NC_000962.3 miniprot mRNA 227847 230402 570 + . ID=MP000266;Rank=1;Identity=0.4880;Positive=0.6400;Target=sp|P9WQJ9|IRTA_MYCTU 600 841 +NC_000962.3 miniprot CDS 227847 228346 378 + 0 Parent=MP000266;Rank=1;Identity=0.4790;Target=sp|P9WQJ9|IRTA_MYCTU 600 764 +NC_000962.3 miniprot CDS 230153 230402 192 + 1 Parent=MP000266;Rank=1;Identity=0.5060;Target=sp|P9WQJ9|IRTA_MYCTU 765 841 +##PAF tr|Q6MX19|Q6MX19_MYCTU 28 0 28 + NC_000962.3 699930 349623 349707 81 84 0 AS:i:122 ms:i:122 np:i:27 da:i:0 do:i:222 cg:Z:28M cs:Z::3*cgaS:24 +NC_000962.3 miniprot mRNA 349624 349707 122 + . ID=MP000267;Rank=1;Identity=0.9643;Positive=0.9643;Target=tr|Q6MX19|Q6MX19_MYCTU 1 28 +NC_000962.3 miniprot CDS 349624 349707 122 + 0 Parent=MP000267;Rank=1;Identity=0.9643;Target=tr|Q6MX19|Q6MX19_MYCTU 1 28 +##PAF tr|Q79FJ0|Q79FJ0_MYCTU 57 0 57 + NC_000962.3 699930 171709 171880 117 171 0 AS:i:198 ms:i:198 np:i:43 da:i:-1 do:i:285 cg:Z:57M cs:Z:*gccM:1*gcgP:4*gacR:3*gccT*gcgP:1*ataR*gctQ:4*ggcP*accN:2*actS:8*cccA*tacF:2*ggcP:2*gcgQ:3*ttcL:1*atgN*gtcI:8*cagR +NC_000962.3 miniprot mRNA 171710 171880 198 + . ID=MP000268;Rank=1;Identity=0.6842;Positive=0.7544;Target=tr|Q79FJ0|Q79FJ0_MYCTU 1 57 +NC_000962.3 miniprot CDS 171710 171880 198 + 0 Parent=MP000268;Rank=1;Identity=0.6842;Target=tr|Q79FJ0|Q79FJ0_MYCTU 1 57 +##PAF sp|I6Y8K5|PG08_MYCTU 175 0 175 - NC_000962.3 699930 335800 336310 402 525 0 AS:i:625 ms:i:617 np:i:144 da:i:0 do:i:2361 cg:Z:92M2I2M2I58M1I18M cs:Z::9*gttA:10*ctcI:2*agcT:1*agcG:12*ctgV*atgL:5*gagQ:2*acaV:4*ctgA:15*cagA*gcgT:2*gccI:7*tccA:1*ggcA:1*gccS:6+AS:2+SI*gtgT:5*ccgA:2*gagA*ttcP:3*aatA*accL:9*aacD:7*aatA:2*gacA:2*tggL:1*atcF:10*gccP:1*gtcG*aacA:2+L*gccL*ggcF:7*aacP:1*ggcA*gccS:2*ctcA*atcL:1 +NC_000962.3 miniprot mRNA 335801 336310 617 - . ID=MP000269;Rank=1;Identity=0.7657;Positive=0.8229;Target=sp|I6Y8K5|PG08_MYCTU 1 175 +NC_000962.3 miniprot CDS 335801 336310 617 - 0 Parent=MP000269;Rank=1;Identity=0.7657;Target=sp|I6Y8K5|PG08_MYCTU 1 175 +##PAF tr|L0T3X8|L0T3X8_MYCTU 594 0 594 + NC_000962.3 699930 622792 624574 1782 1782 0 AS:i:3163 ms:i:3163 np:i:594 da:i:0 do:i:0 cg:Z:594M cs:Z::594 +NC_000962.3 miniprot mRNA 622793 624577 3163 + . ID=MP000270;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T3X8|L0T3X8_MYCTU 1 594 +NC_000962.3 miniprot CDS 622793 624574 3163 + 0 Parent=MP000270;Rank=1;Identity=1.0000;Target=tr|L0T3X8|L0T3X8_MYCTU 1 594 +NC_000962.3 miniprot stop_codon 624575 624577 0 + 0 Parent=MP000270;Rank=1 +##PAF tr|L0TCB8|L0TCB8_MYCTU 588 0 588 + NC_000962.3 699930 149532 363106 1029 2043 0 AS:i:1406 ms:i:1472 np:i:389 da:i:0 do:i:0 cg:Z:91M1I31M1D24M2I86M211426N31M2D11M9D10M1D26M2D17M1D16M135N3M17D15M2D8M12D21M4I36M33D64M12D23M1I32M2I19M1D14M cs:Z::4*agcV*gtaA*gccV:2*attA*gtgL*gtgA:3*acaS:1*ctgV:1*ggtN:4*atcL:9*ccgG:2*gccG*gtgL:11*atcL:1*gcgS:6*cagV*gccS:2*gcgQ*ctcV*agcA:3*gcgT:1*tttL:1*cagD:4*acgA:1*gccT:1*ggcA*gctG:1*gcaS:2*gccL*gccT:1+A:1*cagN:1*gagQ:1*cagN:2*gccN:16*aacD:2*gatV:1*gcgT-ccg*gggA*actS*gggS*cagP*gccD:1*gggQ*gctD:2*atcL:1*tacF:4*aatA:1*ggcY*tccN*gggS:2+TP:1*cagM:3*gccN:2*ccgN:5*catN:2*tccT:2*gccS:2*tccA:8*cacS:4*tggY:4*gtcN:2*tccI:2*gcgN*ggtA*gtcI*ggcV:2*gtgG:3*cacN:11*gccS:2*ggcS:2*aatQ:4*gccL*gatT*gccG:1*atcD~gt211426ag*gcgG*ctgV*ttgN*gggP*cgcA:1*ctgV*atcT*ggcN*aacP*ggtA*gccL:3*ccgA:1*accD*gggS*cagN*gccI*ggcE*ggcP*gacQ*ggtT*gggS*ctgV:1*ttcI:1*aacT-ggcggc*aacQ:2*tccD:1*gcaT:2*cagG:2-ggggccggcggggcggccgggttcttc*ggcV:6*gacA:2-gcc*ggaD:3*ggcN*gccP*ggcA*ggcN:1*gccS*ggcI*tggA*ttcN*ttcA:1*ttcA:4*gggA:3*atcD:1-gttgcc:1*atcA:3*ctcA:5*gacQ*ggcA*ggcA*aacS:2-ttc*ttcS*ggcS*aacV:2*aacD:2*atgN:4*gcgG*gccT:1~gt135ag*gcgT*ggcN:1-gctggcggtgacggcggcaacgcctccacgagtgggggcatcgggatcgcg*caaH*accA:11*gacR:1-gcaccc:1*ggcW*aacL*ggcV:4-agcgtcgagcacactggcgctaccggctcctctgcg*agcN:5*accA:4*gggA*gtcI:1*gcgG*cccT:5+VPAN*aacQ:2*cacN*gtcS*agcA*ggcL:1*tcgT*gtcQ*aacP*acaV*gccG:1*gccD:2*aaaD:8*gccT:2*ccgR:2*cacD:3-gttctatccggcccggttggcgacagtggcaacggtggtgccggcggggacggcggggccggggttagcgccaccgatatcgccggcaccggcgggcgc:2*aacA:2*catA*ggcS:1*ctgW*tggL*atcM:4*gacN:2*gcgN:2*gtcT:2*gtcS:2*gccV:1*gcgG*gctN:1*gcgG:3*cacD:1*ggcA*gatG:2*tccN*gtaA*aatT*accS*cctT*attS*ggcS*ggcI*agcP*gagF*gccD*ggtA*gacH:2*aagN:2*ctgA:3-ggcggtgggcgcgggatattcggccagtttggggcc*ggcA:1*gccH:2*gccT:2*gtcD:2*gccD:2*gctH*ggcA:4*ggcR:2+L*aacL*ggtA:1*gccQ*attH*ttcA:1*gccS:1*accN*cccG:1*gccG*gccG:4*gacA:2*gttT*ggcH:2*ggtP*gcgG*gccS:1*gggN*aaaA:1+GT:1*gccT:1*ggtN*agcA*ggcD*ggcS*gtcT:2*gccG*accP:1*gccS:2*gccL*aagG:1-ctc:1*ggtA*gccF*accN:1*ggcS*aaaR:1*aacT*aacD:4 +NC_000962.3 miniprot mRNA 149533 363109 1472 + . ID=MP000271;Rank=1;Identity=0.5037;Positive=0.5712;Target=tr|L0TCB8|L0TCB8_MYCTU 1 588 +NC_000962.3 miniprot CDS 149533 150231 771 + 0 Parent=MP000271;Rank=1;Identity=0.6695;Target=tr|L0TCB8|L0TCB8_MYCTU 1 235 +NC_000962.3 miniprot CDS 361658 362035 197 + 0 Parent=MP000271;Rank=1;Identity=0.4365;Target=tr|L0TCB8|L0TCB8_MYCTU 236 346 +NC_000962.3 miniprot CDS 362171 363106 504 + 0 Parent=MP000271;Rank=1;Identity=0.4075;Target=tr|L0TCB8|L0TCB8_MYCTU 347 588 +NC_000962.3 miniprot stop_codon 363107 363109 0 + 0 Parent=MP000271;Rank=1 +##PAF tr|O07243|O07243_MYCTU 204 0 204 + NC_000962.3 699930 384534 385146 612 612 0 AS:i:1081 ms:i:1081 np:i:204 da:i:0 do:i:0 cg:Z:204M cs:Z::204 +NC_000962.3 miniprot mRNA 384535 385149 1081 + . ID=MP000272;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07243|O07243_MYCTU 1 204 +NC_000962.3 miniprot CDS 384535 385146 1081 + 0 Parent=MP000272;Rank=1;Identity=1.0000;Target=tr|O07243|O07243_MYCTU 1 204 +NC_000962.3 miniprot stop_codon 385147 385149 0 + 0 Parent=MP000272;Rank=1 +##PAF sp|O53732|UFAA1_MYCTU 427 0 427 - NC_000962.3 699930 535226 536507 1281 1281 0 AS:i:2236 ms:i:2236 np:i:427 da:i:0 do:i:0 cg:Z:427M cs:Z::427 +NC_000962.3 miniprot mRNA 535224 536507 2236 - . ID=MP000273;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O53732|UFAA1_MYCTU 1 427 +NC_000962.3 miniprot CDS 535227 536507 2236 - 0 Parent=MP000273;Rank=1;Identity=1.0000;Target=sp|O53732|UFAA1_MYCTU 1 427 +NC_000962.3 miniprot stop_codon 535224 535226 0 - 0 Parent=MP000273;Rank=1 +##PAF tr|O53772|O53772_MYCTU 388 0 388 - NC_000962.3 699930 668581 669745 1161 1164 0 AS:i:2037 ms:i:2037 np:i:388 da:i:-1 do:i:0 cg:Z:388M cs:Z:*gtgM:387 +NC_000962.3 miniprot mRNA 668579 669745 2037 - . ID=MP000274;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|O53772|O53772_MYCTU 1 388 +NC_000962.3 miniprot CDS 668582 669745 2037 - 0 Parent=MP000274;Rank=1;Identity=0.9974;Target=tr|O53772|O53772_MYCTU 1 388 +NC_000962.3 miniprot stop_codon 668579 668581 0 - 0 Parent=MP000274;Rank=1 +##PAF tr|O53969|O53969_MYCTU 410 0 410 + NC_000962.3 699930 689058 690396 456 1344 0 AS:i:556 ms:i:556 np:i:221 da:i:0 do:i:105 cg:Z:88M1I30M2D136M1I76M6D11M5D5M8D8M10D15M2D12M2D18M3D9M cs:Z::1*agaK*acgS*ctgF*accA:1*ttcR:2*ggcL*cgtA*gtcI:1*atgT*atgV:1*gcgI:2*acgV*gtgA*ctcA:1*gttA*ggtL*gttA:1*caaL*agcQ*ttcY*accQ*agcR*gtgL:1*atgF*ctgF*ttcN*gccQ*acaG*cctT*accR*tacV*tatS:1*caaY:3*acgA:2*atcL*aacR:2*gatN*aagT:2*atcV*gctS:1*gtgY*aacP:2*ctgK:1*cgcS:1*ctgI*gcaS*atcL*cgcD:1*aacP*cgcG:2*atcV*ggaE:1*tcgK*ttgV*cccD*ggcT*aagD*acaV+R*atcL:1*atgN*caaR*agcT*cggE*gcaV:2*cgcK:1*gacK*accG*attL:2*cgtS:1*aacF:1*gagD*atcV*gaaT:3*tcgD*gagG*ccgR:1-aaaccc*aacD*ggtS*ttcP*ctgI:1*ttgI*gcgE*cagR:2*acgS:3*atcL*tatP:2*ttcL*gtcG:1*gtcL*acgA*aagA*gcgT*gcgI*acgS:1*tggL*gacH*atcT*gatE*gccR*gtcL*aaaS*cgcE:2*aacA*gtgT:1*tcgA*gagQ:2*gatA*cagD:1*gccP*ccgA:1*ctaF*agtR*gccN:1*ctcI*gagH:2*aagA*gcaR*ttcL*tccA*gacQ:1*gtcL*ggcD*cggE:1*ggcD*gagN:1*atcL*gagR*caaS:5*aacA*aggK*atcA*gcgT*cgcG:2*ggcA*gacN:1*agcT*gagD:1*gtcI*aacV:2*ctgV*gtgR*aatD*gccT*aagN*acgV*ctgV:2*gcgQ*ttcL*aagR*caaT*cgcQ:1*cagA:2*cgcD*attR*ctgI*ctaW*accA:1*gtgI:1*gagA*gcaV*tcaA*gccE:1*gtaL*tctR:1*ctgF:1*acaA*gacE:1+R*cccQ*aacQ:1*aacR*catP*gtgA:1*gccD*cagK:1*cgcN*acgG:1*agcL*gagA*gagI*ctgV*gtgE*aagN:2*aacE*gaaR*ttgV*gccR*gatQ*gtaA*gccI*gtcP:1*ctcI*ggcN*agaT:1*accV*gcgM*gccS:1*acaG:1*gccS*gtcL*ggtS:7*atgY:6*tacG:1*attF*cttV:2*tggF*gttI*gacS:3*aaaS*aagD*cggL:1*atcL:2-gagaacttctggcgcagt:1*ggtT:1*ccgL*gaaP*ttcS*cgcQ*tggL*cccT:2-aacggcacccggttc:1*aacT:1*gcgQ:1-ccggcggcgccaccggtgcgggag:3*aagP*catL:1*ggaM:1-gccgtcccgccgggaacgccgtgctcctac*acaY:1*gcgR*gcgT:1*gcgQ*ttgG*ccaG*cggE:1*gacR*accL*ccaT:2-tgcgcg*ggcD:1*accI*gttT:1*ccgN*ttcP:1*ggaD:1*gacR*ttcY-ccggca:1*ctcY*gatR*gtcP*cagE:1*tcgP*ccgA:1*aatP:1*gatG:4*acgG:1-ggcatccta*agtP:1*gggQ*cggQ:2*gagD*ccgQ*gctP +NC_000962.3 miniprot mRNA 689059 690396 556 + . ID=MP000275;Rank=1;Identity=0.3393;Positive=0.4933;Target=tr|O53969|O53969_MYCTU 1 410 +NC_000962.3 miniprot CDS 689059 690396 556 + 0 Parent=MP000275;Rank=1;Identity=0.3393;Target=tr|O53969|O53969_MYCTU 1 410 +##PAF tr|O65933|O65933_MYCTU 1602 31 1458 + NC_000962.3 699930 486042 586047 1842 4452 0 AS:i:2211 ms:i:2361 np:i:815 da:i:312 do:i:324 cg:Z:39M1I10M11I79M4D190M2D67M1D44M3D408M1D28M1I13M2I17M1I12M9803N5M7D31M5D13M3676U23M8I3M8I41M1I9M2D9M7D29M1D20M8D8M1D41M36687U3M2D13M4D2M4I59M1I17M22255U2I29M9D8M23286N4M1I21M2G55M2I18M5I7M cs:Z:*ataL*aacS:5*atcV:1*gtgM:3*tttY:2*gatG*attV:1*ggcS:2*cggT:2*gacE*tttL*ctgV*accA*gagQ*aagG*aagR*tgtD:1*ataV*acaS*gcgD*tatF:1+A:3*ttcW*acgD*aatV*gctD:1*actL:1+DPDPDACGKMY*gcgT*gagR*tccR:1*ggcT:2*aagE*gatH*gtcA*gcgG*ggtD:2*aatA*agaG:2*gatG:1*ccgG:1*gacS:3*cgaA:17*catR*gcaT:2*attD:1*gagT*tcaK:2*cttG:1*cgtA:4*gttA:2*tcgI*tcaH*actA*gacG:1*gtcG*cggG*cttQ*gtgL:1*gctG*agcE*gctL*cagE*caaG-aagtctactatt*tggY*gatG*aacL:2*ggtS*tctT*tcgL:1*attV*attA*gccS*aatG:1*atcV*tcaA:1*tttV:1*gatG*attL*cagE:2*tccA*attV*gtcS*attV:10*gtgL:3*tgtV*cgaQ:2*agtR*accS*tggG*gacE:2*atcL:2*gtcA:2*acgV*aatT:1*cttM*attA*tcaT:1*gaaA*ccaA*tggF*ggtV*gggE:1*aggS*gaaR*gcgQ*ggcR*atcA:1*tcgA*cagR*acaD:1*tgcR:1*cacK*gcgV*ttcY*gatA*aaaG*tccA:3*atgT*gtaA*cgcW*ggtS:2*tgcA:2*atcL:1*ctgV*cagE:2*agtV:3*cttR*gagL:1*cggH*cggP*ataV:2*attL*ctgV*acgR:8*aagA:3*attL*atgT:3*cctG*agtP*gcgS:1*attQ*ggtR:1*cttI*gaaR*aatA:1*tgcL*aagA:3*gtcL*gatR*ccgA*ctgV:1*atcV*ggcD*tacV:2*gccG:5*tcgM:3*aggP:3*cacQ:2*ggcL*atgA*gtcT*tttY:1*cgcQ*aagD:1-ccggga*tctV*gggE:2*atgW*atcL:4*ccgS:4*ctgT*gaaS*ggtA:3*atcV:2*ttgV:2*gcgM:1*ttgQ*atgA*gttM*gagR*cgtH:1*tcgV*ctgM*cttP*ccgK*agcT*gggL*gggH*tttV*acgD*gagV:1*aatT:1*gctH*atcV*ccaD*ttcW*acgS*gaaV*ttgG*ggcA*ctgV*agaS*gttL*gtaL*gacT*gaaQ*cttP*cagR*gagA:1*ccgS-gtg:1*gcgH:12*tttI*ggcS:7*gtcL:1*gaaQ:1*ggtP*tcgV:1*gggE*gcgS*gacV*acgV*gttP*tcgE*ggcV*cgcA*gcgS*gatP*gttT*ggcA*ggtA:1-ggtggtggg*gtgA:1*gcgP:2*attL:1*gggA*aagR*acgS*gctE*tcgQ:3*gctG:2*ggtQ:2*gggL*cggA*tatF:1*cggA:1*cggN:1*gcgD:2*gttP*gttI:3*tatW:3*agcK:2*tcgA*gtgM:1*gatE:7*cagA*actD:1*gatG*gagA:6*gggA*gtgL*gttA:2*cggE*ccgS*gagG:3*gtcA*tgcV:1*gttR*ggcA*aagR*ccgS*gcgV:3*gctV:3*gccP:3*tcgA:2*ctgV:3*agcA*gagQ:3*gccE*tacL:1*gttL:2*gagL:1*ctcF:3*gtgA*gacE:7*tatL:3*gatN:1*atcL:1*gggE*cacG:1*caaE*gatA:2*aatT*accS:10*gtgI:4*tatA*cggT:2*atgQ*tcgH:2*gtgI*cggS:1*ggtD*ttgF*gtgL*ctgI:6*ttgI:4*gtcL:2*gcgV:1*tgtS:1*ccgT:3*atgG:9*cagA*gcgE:5*gccV:1*tttV*gcgV:1*cagA:1*cgtS:1*gacE:2*gcgL:1*atgV:1*gggV*cacD*gatG*gtgA*agcN*atcL:4*ggtA:1*gctH:3*atcV:2*gccC*cacE*gatA:3*gcgD:3*cggH*ctgF*cgcA*ggcR*cagR:15*gcgL:5*atcL:4*gccR*gttI:2*gaaG*ctgI:2*ggcS*ttgK:1*acgR:2*gtcL*attV:6*ttgM*gtgA*gccG*gacA*gacG*ttcY*gccG*tcaD*gctG*gatQ:2*gccV*cggE:1*atcA:1*gcgR*gtgP:3*ggcA*gacE*agtG:1*cgtQ*agtL*gccL*cacN*tgcA*gccV:2*agtT:2*atcV:9*tcgA:1*atcV:1*gcaQ:2*gccP*gacL*gcgG*cagE*atcA*gtgL:2*cccA*acgM*ctgM:1*aaaR*gatE*cggH:2*ccgV*gtcS:2*atgL*acgG:1*gcgV:1*cagT*ggcL:1*gtcT*tcgA:1*atgA*ggcQ*ctgM:2*gccP*tcgA:2-tcc:1*tacS*cggP*cccG*aagR:1*gtgI:8*catR:1*aagR*ttcY:2*gcaP:1*gccT*ccaS*tcgA*gtcG:1+A:1*cccI*accS*gccG*gccV:1*cagL*atcL*gggA:1*agcR*gatH:1+LL:2*gaaV*ctcV*ttgE*gcgQ*tccP*tccD*gggS*tttD*gccV*gccV*cggV:1*gccT:2+L:1*gccV*gacG:2*ctcR*gccW*gcaL:1*atcD*gagH:1~gt9803ag*ctgI*gtcA:1*gccV*ctgV-cagatcgggtttgtcgacggc*gtgL*gcgL:2*catA*gtaA*gtcF:5*catR*ggcA*gtcA:1*gcgQ*ctgV*ataD*gaaC:1*ctgV*cttV*gcgE*gacE:1*ttcT:1*gccV*gcgT:1-gatcagcgacagtgt:2*ggcL:1*tgcT*ctgV*ttgG:1*ggtV*gatQ*cgcL:2*gV~gt3673ag-ag*cagV*gctG*ctgV*atcG*gccE*tcaM:1*accQ*gagR*ctgP*accV*accS*gtcI*gcgY*ataS:1*cggN*gtcA*gacE*gccS:1*gggS:1+WVLHARGV*accL:1*ctgA+KAVAPAAD:1*gacS*ctgV*ctcW*aacP*cggP:2*atcA*acaA:1*ctaV*cccD*aacV*accD*gcgG*gggA*tccY*cgcQ*agcR*gccF:2*gcgL*gtcG*ctgY*acaE*gcgY*cagG*ttgR:1*cgtF*gagQ*gcgG:1*aacT*accA*aacM:1*gtcR*aagR+E*ctcS:1*gtgL*attF:2*gaaV*cgcA*accV-ctgtgg:2*gcgD:1*gaaD*ttaV*gtcT*cggL*gctS-gcagaacaattggtggacgac:2*gtgG*gtcI*ctaH:1*tacL*acaV*accL:1*gacA*ccgA*gtgL*ctgH:1*cgcM*cggG*ctaM*gaaV*gatG*accE*ggtQ*tgcA:1*gcgT*gtgM*atgL:1*ctgF-ggt:1*ccgW*atcQ:1*accV*ggcS:1*ggtH*atcA:1*aacG*ccgA*cacS*aatR*atcV*gagR*atgA*atcR*gtcI:1-ggtgcccgcgttcccgtggtgctg*gacP:2*atcD:2*gccV:1-gat*gccV*gcgE:2*atgD*gagQ*ttgA:1*tgcL*gatP*gccV*gtgL*ttgS*ttgV*gccQ*agtA*gcgL:1*accM:1*gccS*gccV*gacS*ccgS*ccgQ*gcgL*atgL*gccS:2*atgV:3*gtgD*accA:2*tatR*ctgG*gcgL*cL~gt36684ag-ta:1*ataV:1-tcgaat:1*tctL:1*gaaV*atcE*atcL*aaaA*atcH*cgcN:1*gtgI*gtcS:1-taattcttcggt:2+VVWE:1*catE*ctcS:1*ggtQ*gtcD*gccG*gacV*catG*gcgP:1*ggtY:1*actA*ggcT:1*ctcR*cgcV*catL*caaV:1*atgL*catQ*ccgS*cgtW*caaL*cacA*cgcQ*aatE:1*cgtA:1*catR:2*ggcV:1*cttT:1*catG*gtcS:1*cgcG*ccgQ*gtcD:1*ctgT*gtaN:1*tatA:1*ctgA*cagA*ctgV*accW:1*attL*ttgV*catR+S:1*gatQ*ctgA:1*cggH*gatP*cgaG:2*gtcM*catL*cgtV*cgtD:1*ttcD:1*ccgS*gM~gt22252ag-ta+DV:1*tccD*agcV*gcaI*cgcG*tcgC:2*ccgE:2*gtgM*gttI:1*cgaN:1*gtgT*gtaA:6*ccgQ*gtaL*gcgR*gccP*gggQ-tgctgggcatagcgggcgcgcgcgtag*gtgP*gcgI:1*tcaQ*gtaL:1*acaD*tcgT~gt23286ag*acaN:2*ttcW+R*atcL:1*aacA:2*acgA*cccG*agcA:1*aggE*gctD:1*ctgT*tgcL*agcA*gcgS*cagC:2*ccaK*ccgE*gcL*gaaA:2*ccgQ:1*caaR*gaaI*gatE*acaV:3*gtgG*tttV*gcgN*ggtF*gcgR*gtgD*ctgV*gggL*ttgV:1*gtcL*gtgG*ctcI*gtcY*gagP*ttcG*cagA*gtaA*gccE:1*gcgG:1*cagE*gccG*cttA*tgcG*ccgV*gaaV*ctgT*ccaE:1*gtcG*gtcP:1*cagV*cttT*gtgG*cacL*cgcA:2*caaD:1+VM:1*gcgL*gtcL*gtcG:1*gtcA:1*cagS:1*cgcA*accV:1*cgaD*acaA*acaR*gccL:2+KLPNR:2*gccL*cgcT:1*ggtA:1 +NC_000962.3 miniprot mRNA 486043 586047 2361 + . ID=MP000276;Rank=1;Identity=0.4137;Positive=0.5492;Frameshift=1;Target=tr|O65933|O65933_MYCTU 32 1458 +NC_000962.3 miniprot CDS 486043 488796 2169 + 0 Parent=MP000276;Rank=1;Identity=0.4979;Target=tr|O65933|O65933_MYCTU 32 954 +NC_000962.3 miniprot CDS 498600 498783 39 + 0 Parent=MP000276;Rank=1;Identity=0.3065;Target=tr|O65933|O65933_MYCTU 955 1003 +NC_000962.3 miniprot CDS 502457 503065 43 + 2 Parent=MP000276;Rank=1;Identity=0.2273;Target=tr|O65933|O65933_MYCTU 1004 1204 +NC_000962.3 miniprot CDS 539750 540052 29 + 2 Parent=MP000276;Rank=1;Identity=0.2925;Target=tr|O65933|O65933_MYCTU 1205 1304 +NC_000962.3 miniprot CDS 562305 562444 34 + 2 Parent=MP000276;Rank=1;Identity=0.3125;Target=tr|O65933|O65933_MYCTU 1305 1344 +NC_000962.3 miniprot CDS 585731 586047 47 + 0 Parent=MP000276;Rank=1;Identity=0.2982;Frameshift=1;Target=tr|O65933|O65933_MYCTU 1345 1458 +##PAF tr|O86364|O86364_MYCTU 116 0 116 + NC_000962.3 699930 544834 545182 345 348 0 AS:i:632 ms:i:632 np:i:116 da:i:-1 do:i:0 cg:Z:116M cs:Z:*ttgM:115 +NC_000962.3 miniprot mRNA 544835 545185 632 + . ID=MP000277;Rank=1;Identity=0.9914;Positive=1.0000;Target=tr|O86364|O86364_MYCTU 1 116 +NC_000962.3 miniprot CDS 544835 545182 632 + 0 Parent=MP000277;Rank=1;Identity=0.9914;Target=tr|O86364|O86364_MYCTU 1 116 +NC_000962.3 miniprot stop_codon 545183 545185 0 + 0 Parent=MP000277;Rank=1 +##PAF sp|P71668|LIPI_MYCTU 320 67 293 - NC_000962.3 699930 260018 260663 264 681 0 AS:i:353 ms:i:321 np:i:118 da:i:48 do:i:93 cg:Z:6M1I2M1I69M2I1M1I46M3I7M1D26M1I1M3I56M cs:Z:*gtcI:1*gtcT:1*ctaI:1+W*cgaP:1+T*gccC*ggcP*agcD*aacQ*gaaA*ccaE:2*gcgV*ctgV:1*tggY*atcF:1*gccG:2*tacF:3*accD*gcgL*caaD*cagT*gacH:1*cggG*ctcT:1*ctcR*cggQ*ttcH*agcA*agcV*agaG*ctgA*ggcD*atcA*actI:1*gcaV:9*aatH:5*ctgI*ggcE:1*tgcA*tacW*tcgA:1*ttgT*accR:1*ctgV:1+EH*agcG+R*ctgQ*ccgV*gcgG*gtgA:1*cccL*gcgG:1*gtgI:1*atcV*ggcA:1*gctD:4*ggcT*ctcI:2*gcgV*ctgI:1*ctgQ*cttR:3*cgtM:2*atcP*acaP*ccgI*gcaV:4*gtgW:2*atgS*ctcT+LWD*gacQ*gacS*cggL:2*atcL:1-ccc*gccE:1*ccgA*cacD*tacA*cggP*ctaI*tggL*aacD*gggV*cgcK:1*aacI*cggA*ttcA*ggcF*tggS:1*gcaW:1*cttA:1*gatE*gcgI:1*gcaL+H*cggN+PPA*gtcP*gcgM*gtcA:3*cgtA*gacE*gacN:1*ggaA*gggD:1*gcgP:2*tggY:1*ggcA:1*ggcA*accG*cacY:1*ctgP:1*cacR:1*gagD*gatG*ctgI*gccR:1*gccG:1*cgtL:1*acaA:5*tgcV*cagE:1*gaaH*gtaN*gtcA*gaaQ*ggcT*gccL*ttcV:2*ttcY +NC_000962.3 miniprot mRNA 260019 260663 321 - . ID=MP000278;Rank=1;Identity=0.3877;Positive=0.5198;Target=sp|P71668|LIPI_MYCTU 68 293 +NC_000962.3 miniprot CDS 260019 260663 321 - 0 Parent=MP000278;Rank=1;Identity=0.3877;Target=sp|P71668|LIPI_MYCTU 68 293 +##PAF tr|P71986|P71986_MYCTU 256 31 245 + NC_000962.3 699930 387878 388541 279 684 0 AS:i:405 ms:i:400 np:i:127 da:i:-1 do:i:6 cg:Z:55M11D29M3D91M4I10M3I22M cs:Z:*ctgV:1*agcF:1*ggcS*cgaK*catG*gaaV:2*aggN*gacG:1*cgaG*aagR*tcgW*tcaL:1*gtcI*ctgA:1*gcgS*gtcL*ctcV*gccV*ccgS:2*gtgI*ttcL*ttcY:1*acgQ:1*ggaA*gatE*gtcH*agtT*acgC*cttC*gccR*gccE*cgcT*gccP*gatA:1*aacI:1*gttT*ctcG*ggcP:1*gacS:2-tgttgtgtgcagatcgtgccggttgcaccgctg:1*ttcN*tccA*tcaP*cagR:1*tccA*ggcS*ggtP*gaaT*atcE*gggA*acgD*ggcL:4*cagA*ttcP*gctV*tcgA:1*tcgQ*agaQ*tggF*cgcQ*atcF*gtaA-tctcggtat:2*gtaA:3*cccS:1*cagE:6*gtcI*ttgW*acaV:2*agtA*atcV:1*gcgV*gctL:2*gaaQ:1*cgcT*gaaN:1*ggcF:1*gttY:1*ccgQ:1*gcgP:1*agaK:7*ctcI:3*gttI:2*cccH*ggcH*accS*gccD:3*gcgQ:3*gagQ*atcV*gtcA*gctG*ttcL*gtaA:1*aagA:2*accK:1*tttW:1*atgV*caaL*gatH:4*ggcQ*gccG:2+PGIG*acgA:1*aacS*ggcW*gcgT*cggA*acaD*accY:1*gccS+ETL*ggcN:4*atcV:2*acgA:1*gtgD:7*gagR:1*ctcT:1 +NC_000962.3 miniprot mRNA 387879 388541 400 + . ID=MP000279;Rank=1;Identity=0.4079;Positive=0.5570;Target=tr|P71986|P71986_MYCTU 32 245 +NC_000962.3 miniprot CDS 387879 388541 400 + 0 Parent=MP000279;Rank=1;Identity=0.4079;Target=tr|P71986|P71986_MYCTU 32 245 +##PAF tr|P96257|P96257_MYCTU 328 0 328 - NC_000962.3 699930 497316 498300 984 984 0 AS:i:1680 ms:i:1680 np:i:328 da:i:0 do:i:0 cg:Z:328M cs:Z::328 +NC_000962.3 miniprot mRNA 497314 498300 1680 - . ID=MP000280;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96257|P96257_MYCTU 1 328 +NC_000962.3 miniprot CDS 497317 498300 1680 - 0 Parent=MP000280;Rank=1;Identity=1.0000;Target=tr|P96257|P96257_MYCTU 1 328 +NC_000962.3 miniprot stop_codon 497314 497316 0 - 0 Parent=MP000280;Rank=1 +##PAF tr|P96262|P96262_MYCTU 68 0 68 + NC_000962.3 699930 502166 502370 204 204 0 AS:i:336 ms:i:336 np:i:68 da:i:0 do:i:0 cg:Z:68M cs:Z::68 +NC_000962.3 miniprot mRNA 502167 502373 336 + . ID=MP000281;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96262|P96262_MYCTU 1 68 +NC_000962.3 miniprot CDS 502167 502370 336 + 0 Parent=MP000281;Rank=1;Identity=1.0000;Target=tr|P96262|P96262_MYCTU 1 68 +NC_000962.3 miniprot stop_codon 502371 502373 0 + 0 Parent=MP000281;Rank=1 +##PAF sp|P9WGP3|SECA2_MYCTU 808 0 640 + NC_000962.3 699930 96894 189830 507 2004 0 AS:i:106 ms:i:285 np:i:267 da:i:-1 do:i:150 cg:Z:20M2D6M24351N14M2G38M17175U3M6D14M1D28M2I26M38583U16M1D10M1522V22M4413N26M2D12M3D51M8I17M26I12M4I10M5I5M2I29M6I20M5072N64M3I15M1D28M2D4M1I6M2D5M6D9M1I29M2D39M cs:Z:*gtgM*agcN*gcgV*cccH*agtG:1*acgP*gccR*ctaI:6*aacD:4-gggttc:1*tgcR*gccP*aaaA*ctaF*gaaA~gt24351ag*ctgY:3*cccV:1*gccK*gcgT*tcaT:1*agcA*gctQ*ggcP*gctG*tcR:3*ctcR*gccF*ggtW*atcR*actL*agcL*tccG:1*ccgS*tcgT*ggcE*agcK*agcN*accR*gccS*acaR*ttcS:2*cctD*agcV*tccT:3*cgcE*agcY*gcgD*ctgK*ccgE:1*ttgA:2*gctS*cD~gt17172ag-ga*gatE*gagK*atcL-gcctttcgctcgccggac:1*gacK*cgaA:2*cagL*gccL*tcgN*atcL:4*tctE-ctc*gaaS*gaaA:1*tttI:1*ttgQ*cacF*gtcL:1*gtcI*tacA:1*cggE*gtgA*attA*gcgE*gagR*ttcR*aacT:1*ggtL*acaR:2*ccgD*ctcV:2+LG:1*acgL*cagR*gtgM*gacL:1*cctG*cccD*gggV*tcgI*gggE*ctgM*ggcA*tcgT*tcgG*tctE*gctG*ttgK*gtgT*gtgL:1*atgG*cttA*ctcI*acgA*acaA*tA~gt38580ag-cg*gctG*cgaY:1*gcgL:3*ggtH*gatV:3*gtgT*ctgI:2-ccg*agcY*atcL*gggA:1*tcaR:3*gctW*ttgM*caG~gt1519ag-g:1*gttL*gtcL*gggD:1*gcgM*acgG*gccL*gccT:1*gccG:1*ttgI*atcT:1*gagD*ccgS*atcT:1*gccD*aaaE*tcgR~gt4413ag*cccR*ggtT*aggA*gtgY*tctD*gagR*caaD*atcV*tatT*cggY*cgtA:2*aggN*aaaE*gtgI*gatG*gtaF*cgcD*gccV*atgL*acaR:1*ccgQ*cagL*acgV-cagagc:1*aggD:1*gggN*gtgD*gttL*gccV*gagS*tcgP*gggN:2-gaacgacgg:3*gttI*cccD*aagE:1*gtcD*gcgS*tcgV:2*aacD*cgtE*ggtA*gtgL*gcgV*gtcP*gtgL:1*gagL:2*gcgT*ggcT*gagH:1*gcgE*ctgT*cttP*cccR*gatL:1*ctcI*tacI*accR*gctL:1*ggtA*gccE*agcL*atcV:2*gctK*tggD:1*gccD*gacE*gtcY*gttF+ATDSDNRN:1*aagH*gtcL*gcgT*ccgE*ccgH*acgG:1*gcgR*gagK:1*ggcE*cggK*ttgA*cgcL:2+IDLYSEEHVGTTLTEVNVALHAHVLL:1*acaR*ctgD*atcV*ggcH*tttY*ctaI*gcgV*cccR*cgtD*aatD:1+VHLI*gacN*aacA:1*atcR:1*gcgR*ctgI*accA:1*gccL+QRWPD:1*gtgL:2*ttcA+VE:1*ctcK:1*gccG:1*ccgE*cgcT*atcT*tcgE*cggT*gcgG*cagE:1*atgL:1*gcgT*ctgI*tcgT*tcgV:2*aacL*gtgI*tctN*gggR:1*aagA*gctT:1+CGMTGT*ctgA:3*tcgG:1*tcgQ*accL:1*ttcQ:1*ccgY*atgQ:1*acgG*acgV*gcgS*gccP*ggaI*acgP~gt5072ag:1*ggcN*cggK*agtP*gggN*gatI*atcR*cgcE*gtaD*attE:1*gccD:1*cccV*gtaY*gtcI*ggcT*gtaT:1*caaA*gtcK*gacN*gagD*cacG*ccgI*cagV*ctgE*cggH*ctgI*gaaT*cagE:1*ggcH*gatQ:2*accQ*ggcP:1*gggL*gatV*gtcG:1*gatR*cggD*ctgV*gagA*cagE*tggS*cagE*atcE:1*agtH*cagE*gaaR*catL:1*gtaR*ctgR:2*gccP*ggtA*ataV+VLN:1*cggK*ggaN*ggtD*cggA*caaE*cggE*cacA:3*cacA*ctgE*ggtA:1-cat*gagK*ttcY*cggG*gtaA*cgtV*gttT:1*cacS*gtaT*gaaQ*gtaM:1*catG*gaaR:1*gttT:1*gtcI:1*cagL*gatG*gcgG*cagS*cggD:1*ttgA*cggD*cgcH-gtgggc:1*gccR:1*gtaA+E:2*cgtG*gtaL*aatH:1-tgtcgg:3*attG:1-cggggttgcgccattgaa*cggH:1*gtcT*cagE*gaaR*cggL:1*gtaN*gaaQ+L*gccR:1*gaaR:1*cgcG*cagR:1*cccG*gccD*gacP:1*attS*gttS*gccV*actF*accF*aatS*catS*gacW:1*ggaD:1*atcV:1*cggA*attA*cggN*cgaL*accD-catcgc:1*cagN*cgaK*attL*gatP*gtaM*gttA*gttT:1*gatE*cgtN:1*gctR*ctgI*cgaV*gtaS*gccP*gaaR*cgcT*aacG*gacS:1*gttL*gtcD*gagH*ggcA:1*ttgR:1*gttA*gacE:1*ggtR*attL*cagL*cagD*cgcV:2 +NC_000962.3 miniprot mRNA 96895 189830 285 + . ID=MP000282;Rank=1;Identity=0.2530;Positive=0.3997;Frameshift=1;Target=sp|P9WGP3|SECA2_MYCTU 1 640 +NC_000962.3 miniprot CDS 96895 96978 58 + 0 Parent=MP000282;Rank=1;Identity=0.4286;Target=sp|P9WGP3|SECA2_MYCTU 1 26 +NC_000962.3 miniprot CDS 121330 121488 29 + 0 Parent=MP000282;Rank=1;Identity=0.3148;Frameshift=1;Target=sp|P9WGP3|SECA2_MYCTU 27 79 +NC_000962.3 miniprot CDS 138661 138897 34 + 2 Parent=MP000282;Rank=1;Identity=0.2346;Target=sp|P9WGP3|SECA2_MYCTU 80 153 +NC_000962.3 miniprot CDS 177478 177562 45 + 2 Parent=MP000282;Rank=1;Identity=0.4643;Target=sp|P9WGP3|SECA2_MYCTU 154 180 +NC_000962.3 miniprot CDS 179082 179148 33 + 1 Parent=MP000282;Rank=1;Identity=0.2727;Target=sp|P9WGP3|SECA2_MYCTU 181 203 +NC_000962.3 miniprot CDS 183562 184122 26 + 0 Parent=MP000282;Rank=1;Identity=0.2143;Target=sp|P9WGP3|SECA2_MYCTU 204 436 +NC_000962.3 miniprot CDS 189195 189830 60 + 0 Parent=MP000282;Rank=1;Identity=0.2350;Target=sp|P9WGP3|SECA2_MYCTU 437 640 +##PAF sp|P9WHZ9|PPE38_MYCTU 391 2 391 - NC_000962.3 699930 337852 434679 531 1185 0 AS:i:625 ms:i:674 np:i:216 da:i:0 do:i:1290 cg:Z:178M5551U53M2D17M3D22M2I11M90130V7M1D26M3I3M1I47M5I12M cs:Z:*atgL*agcD:1*gcgS*gtgW:9*ctgI:1*gtgA:3*ttgS*gcgG:1*atgL*ctgF*gacM:5*gatE:3*gacA*gaaD:1*ggtR*tcgA*gccS:1*gccS:2*tcgD:2*acgI:4*ggtA*tccG*tcgP:1*ctgS:1*gcgP:2*acgV:2*acgA:6*ctgV:7*gcgG:2*cagE*cagL*gcgS:1*accG:1*accA*cggT*ctgA:2*gccT:13*atcA*atcV*tcgT:3*gcaV:1*ttcL*gtgG*tcgA:2*gtcA*tcgT:1*ctgI:4*gccT:7*gccF*gccD:1*gagV*cagE:6*gcgG:2*tttV:6*tcgA:1*gccV*gtcA*tcgE*gcgT:4*ggcS*cagV*gcgP*ctgP*ccgL*accD*gtgL:2*ggcL*gA~gt5548ag-ca*acaS*acaQ*tcgA:1*ttgA*ccaQ*acaL*ccgT*gcaG*acaM*acaA:4*ggcA*tgtA*ccgL*gccS*acaP:1*aacA*aggE:1*tcgA*gctV*cctE:1*actV:1*gtaA*ccgV*ccaV*acaA*ccgA:1*tgtQ:1*actV*cggA:1*ccaG*acaL*acaP*tcgV*gttD*tgtA*tcaA*actL*cggQ*gcaV*ccgG*gaaQ-acatcg:1*ttgA:1*actY*cggP:2*gaaM*acaL*ccgI:1*tcgP*gcaM*accM*cggQ*gtgL*tcgA-gcaacaccg*gctQ*tggM:2*cggT:1*ccgN*gcaT*actA:1*gccL*tgtA:1*accA*cagE:1*ccgA*gcaG*ataL*tggA:1*tcgA+DV:2*tggF:1*cctG*acaD*acaI*ccgA*gtgS*gctG:1*acG~gt90127ag-c:2*gccG:3*gccL-ggc:1*agcA:1*ggaM:1*aacA*ccgE*gacL:1*ggcK*ggcA*ggtR*gccL*ggtV:1*atcA*ggaM*ggcS*gacV*ggcP*ggcP:1*ttgW*ttcE:2+VPA*ggcR*ggcM:1+S*ggcS*ggcA*gtcM*tgcA:3*ttcA*gacM*gccP*ggcA*gggE*gcgV*ggcP*ggcA:3*aagP*gcgM:1*ctgM*ctcM*atcP*gggM*gcgP*ggcM:1*gccM:4*ggcA:1*tccM*ttcP:2*gccM*ggcM:1*accR:3*ggcN+PHVVQ*ggcA*gcgR:1*gggS*ctcV:1*ggcP*aacR*gccV:1*aacI:1 +NC_000962.3 miniprot mRNA 337853 434679 674 - . ID=MP000283;Rank=1;Identity=0.4481;Positive=0.5468;Target=sp|P9WHZ9|PPE38_MYCTU 3 391 +NC_000962.3 miniprot CDS 434145 434679 554 - 0 Parent=MP000283;Rank=1;Identity=0.6257;Target=sp|P9WHZ9|PPE38_MYCTU 3 180 +NC_000962.3 miniprot CDS 428269 428596 46 - 2 Parent=MP000283;Rank=1;Identity=0.2523;Target=sp|P9WHZ9|PPE38_MYCTU 181 286 +NC_000962.3 miniprot CDS 337853 338141 74 - 1 Parent=MP000283;Rank=1;Identity=0.3524;Target=sp|P9WHZ9|PPE38_MYCTU 287 391 +##PAF sp|P9WIE9|PG44_MYCTU 543 0 543 + NC_000962.3 699930 149532 363040 957 1866 0 AS:i:1263 ms:i:1281 np:i:362 da:i:0 do:i:66 cg:Z:91M5I1M1I35M1D16M1I82M6D33M5D16M1I19M7D8M1I16M8D5M6D10M4I24M1D7M1D9M211690U5D21M5D18M2D18M4D15M1D7M21D6M6D35M1I24M1I11M cs:Z::4*agcT*gtaA:3*attM*gtgL*gtgA*gccT:2*acaQ*gacN*ctgV:1*ggtN:2*tcgT*gcgS*atcL:5*gccT:3*ccgS:2*gccS:10*gcgQ:3*gcgR:3*ggcD*cacY:1*cagT*gccH:2*gcgS:1*agcN:7*cagH*cagS:5*gccN*ggtA*ggcA*gctG:3*gcgS*gccS:2+AANAS:1+Q*cagA*gtcL:2*cagN:3*gcgV:4*accA:3*ctgF:9*gatN:1*gcgT*ccgA*gggA*actS*gggP*cagN-gcc:2*gctD:11*ggcF:1+Q*gggT*gcgT:2*cagV:6*ccgS:5*catN:2*tccN:5*tccA:8*cacA:4*tggL:4*gtcA:2*tccP:2*gcgP*ggtT*gtcD*ggcV*gcaP*ggcA*gtgG*gctT:2*cacA:5*gccD:1*gggP:1*tggI:1*gccW:2*ggcN:2*aatP:2-aacggcgccgatgccaac*atcF*gtcA*agcA*ggtF:1*gacN:2*ctcA:2*gccN:2*ggtA*ggcS:1*tggS:1*tacF:1*gacV:5*cacV:2*caaS*ggcS*gcaE-atcggcctcggcggc*ggcD*gccV:2*gacT:2*cagA:7*tggF+L:1*actL:2*gccD:2*cacA:2*caaT*ggcS*ggtN*ggtN*accN:2*ccaD*ccgG-ctgcccggtcaggcaggcatg:2*gcgG:1*ggcT:3+R:1*atcF*ggcS*aacL:2*gccD:2*gacN:2*gtcA:1*gcgT*tccA-ggcggggtcgccggagtaggcggt*gccI:1*gggS:2-atgctgatcgggcacggc:1*gccD:8+ALIG*ttcY:1*aatQ:1*gcgG*gccS:2*gcgL:2*gccF:1*gggE*cacS*ctcT*ttcG:1*aatD:2*tccL:2-cac*ggcA:3*acgL*gccI:1-aac:2*atcV:2*gccF:2*gtcL*gG~gt211687ag-cc-ggcgccggtggcaaa:2*aacS*ggcN:7*ccgA:2*cacT:1*ggcA*agcT*gttL*ctaI*tccG-ggcccggttggcgac*agtL:1*aacA:2*gccG:2*gacI:2*gccF*gggA:1*agcN*gccV*accG*gatN-atcgcc:1*accV:2*cgcL:2*aacQ:2*catQ:1*gggA*ctgA*tggL:2*aacL-ggcggcgacggt:4*gtcA:2*gtcA:3*ggtT*gcgV*gctV:1-gcg*atcL:2*cacN:3-ggcggctccgtaaatacccctattggcggcagcgaggccggtgacggcggtaagggcggcctg:6-cgcgggatattcggccag*tttL*gggF*gccS*ggcI:1*gccV:2*gccD:2*gtcN*ggcA:1*gccN:1*gggA*gctM*ggcP*gggA*accN:2*ggcN:3*ggtA:1*gccV:1*ttcA:1*gccG*ggtS+F*accA:1*ggcS*gccF*gccV:1*acgF:2*gacN:2*gttN:1*gggV*accN:1*gcgG*gccT:2*aaaS:2+I*gccL*ggcF:1*agcA*ggcN:1*gtcA:2*gccP*accS +NC_000962.3 miniprot mRNA 149533 363040 1281 + . ID=MP000284;Rank=1;Identity=0.5129;Positive=0.5820;Target=sp|P9WIE9|PG44_MYCTU 1 543 +NC_000962.3 miniprot CDS 149533 150754 990 + 0 Parent=MP000284;Rank=1;Identity=0.5629;Target=sp|P9WIE9|PG44_MYCTU 1 385 +NC_000962.3 miniprot CDS 362442 363040 291 + 2 Parent=MP000284;Rank=1;Identity=0.4080;Target=sp|P9WIE9|PG44_MYCTU 386 543 +##PAF sp|P9WJC5|ESPI_MYCTU 666 33 381 - NC_000962.3 699930 132442 150491 375 1098 0 AS:i:365 ms:i:417 np:i:146 da:i:90 do:i:165 cg:Z:11M1D7M10I26M4D18M5D30M3D8M5D6M1I15M5I13M2I31M16535V6M2I8M4I28M557U32M12I20M8I11M1I31M cs:Z::4*cccA*gcgS:1*cccN*atgL:1*gccK-tga:1*ggcN*agcG*ggtQ*gggT:2+PTSDDLSERF:1*ccaS*ccgA:1*tgcP:2*tgtP:2*gcgP:2*gtaP:1*cacP*agtT:1*cggM:1*gcgI*ccgA*cccA*tggG*cccE:1-tcgccgccggcg:1*ccgS:1*aggE:1*attA:1*cctS*tgtK:2*tgtT:2*gccM:1*ccgI*tcgA-ccgtagagccatccg*ccaG:1*ccaE:4*aggK:2*tctT:2*ctgM*acgP*atgI*ttgA*gcaG*tcgP*gcgE:1*ttcA:2*ttgK:2*ccgT:2-gcgccccac*agcM:1*gcgI:1*ccgG:3-ccgtgaccgccagcc:2*gcgT*ccgE*acaS*cccQ+L:3*gatR:4*ccgQ*ttgT:1*cacT*agcG*catA:1+QQPES:1*tgcA:1*ccgH*gccV:1*ccgS*gccH*gcgG:1*gagH*ccgQ:1+RR*gccT*ccgA:1*gacA:3*ccgA*atcK*agcM:1*gccI:1*ccgE:1*gcaP:1*ccgA*gccP*tgcS*ccaR*gccP*gccS*ccgA*gagS:1*ccaA*ttgE:2*ttgT*ccR~gt16532ag-a:1*acaA:1*agcQ:1*ccaS+RR:2*tcaR*ccgG:1*acaR*gcgY:1+TDTE:1*accN*gcaV*accG*ggcK*ccaV:2*tctG:1*acgS*gcgI*gacQ*ccaA*ccaR*catL*acaR:1*cccE*acaE*tgtA:1*acaG:1*ggtQ*gcaL*tcgA:1*cG~gt554ag-ca*gcgT*tcaE:1*gcgS:3*ccaL*ccgG*gtgQ:1*ccgR:1*ccgY*atcL*agcA:2*ctaT*ccgR:1*tcaA:1*cccT*ctgE:2*ggaP*ataS:1*gccS:1+QRNSGRRAERRV*aatH:2*ccgL*ccgA:1*ccgQ*ccgH:1*ccgA*cccA*tggQ:1*aacD:1*ccgI:2*ttgA*ccgT+TGGRRRKR*cccA*ataA:1*ccgD:1*ccgD:1*gacT*gtgQ*cccK*ggcS+L*ccgR:1*agaA*ccgA*ccgK:2*ccgK*ttgV*ccgK*aacK*accV:2*ccgQ*ttgK:1*cccK*atcA*ccaT*cccK*gccP*gagP*gagK*actV*gcgV*ccgS*ctgQ*ccgR*agcG:1 +NC_000962.3 miniprot mRNA 132443 150491 417 - . ID=MP000285;Rank=1;Identity=0.3415;Positive=0.3989;Target=sp|P9WJC5|ESPI_MYCTU 34 381 +NC_000962.3 miniprot CDS 149941 150491 303 - 0 Parent=MP000285;Rank=1;Identity=0.3861;Target=sp|P9WJC5|ESPI_MYCTU 34 216 +NC_000962.3 miniprot CDS 133281 133408 28 - 1 Parent=MP000285;Rank=1;Identity=0.3061;Target=sp|P9WJC5|ESPI_MYCTU 217 265 +NC_000962.3 miniprot CDS 132443 132726 86 - 2 Parent=MP000285;Rank=1;Identity=0.2783;Target=sp|P9WJC5|ESPI_MYCTU 266 381 +##PAF sp|P9WKU7|Y493_MYCTU 329 0 329 - NC_000962.3 699930 583703 584690 984 987 0 AS:i:1793 ms:i:1793 np:i:329 da:i:-1 do:i:0 cg:Z:329M cs:Z:*gtgM:328 +NC_000962.3 miniprot mRNA 583701 584690 1793 - . ID=MP000286;Rank=1;Identity=0.9970;Positive=1.0000;Target=sp|P9WKU7|Y493_MYCTU 1 329 +NC_000962.3 miniprot CDS 583704 584690 1793 - 0 Parent=MP000286;Rank=1;Identity=0.9970;Target=sp|P9WKU7|Y493_MYCTU 1 329 +NC_000962.3 miniprot stop_codon 583701 583703 0 - 0 Parent=MP000286;Rank=1 +##PAF sp|P9WKV3|LDT5_MYCTU 451 0 451 + NC_000962.3 699930 571709 573062 1350 1353 0 AS:i:2374 ms:i:2374 np:i:451 da:i:-1 do:i:0 cg:Z:451M cs:Z:*gtgM:450 +NC_000962.3 miniprot mRNA 571710 573065 2374 + . ID=MP000287;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WKV3|LDT5_MYCTU 1 451 +NC_000962.3 miniprot CDS 571710 573062 2374 + 0 Parent=MP000287;Rank=1;Identity=0.9978;Target=sp|P9WKV3|LDT5_MYCTU 1 451 +NC_000962.3 miniprot stop_codon 573063 573065 0 + 0 Parent=MP000287;Rank=1 +##PAF sp|P9WMP5|HEM2_MYCTU 329 0 329 + NC_000962.3 699930 604601 605588 987 987 0 AS:i:1660 ms:i:1660 np:i:329 da:i:0 do:i:0 cg:Z:329M cs:Z::329 +NC_000962.3 miniprot mRNA 604602 605591 1660 + . ID=MP000288;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMP5|HEM2_MYCTU 1 329 +NC_000962.3 miniprot CDS 604602 605588 1660 + 0 Parent=MP000288;Rank=1;Identity=1.0000;Target=sp|P9WMP5|HEM2_MYCTU 1 329 +NC_000962.3 miniprot stop_codon 605589 605591 0 + 0 Parent=MP000288;Rank=1 +##PAF sp|P9WNP5|MENB_MYCTU 314 0 314 - NC_000962.3 699930 639014 639956 939 942 0 AS:i:1652 ms:i:1652 np:i:314 da:i:-1 do:i:0 cg:Z:314M cs:Z:*gtgM:313 +NC_000962.3 miniprot mRNA 639012 639956 1652 - . ID=MP000289;Rank=1;Identity=0.9968;Positive=1.0000;Target=sp|P9WNP5|MENB_MYCTU 1 314 +NC_000962.3 miniprot CDS 639015 639956 1652 - 0 Parent=MP000289;Rank=1;Identity=0.9968;Target=sp|P9WNP5|MENB_MYCTU 1 314 +NC_000962.3 miniprot stop_codon 639012 639014 0 - 0 Parent=MP000289;Rank=1 +##PAF sp|P9WNP7|FADB2_MYCTU 286 0 286 + NC_000962.3 699930 558894 559752 855 858 0 AS:i:1400 ms:i:1400 np:i:286 da:i:-1 do:i:0 cg:Z:286M cs:Z:*gtgM:285 +NC_000962.3 miniprot mRNA 558895 559755 1400 + . ID=MP000290;Rank=1;Identity=0.9965;Positive=1.0000;Target=sp|P9WNP7|FADB2_MYCTU 1 286 +NC_000962.3 miniprot CDS 558895 559752 1400 + 0 Parent=MP000290;Rank=1;Identity=0.9965;Target=sp|P9WNP7|FADB2_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 559753 559755 0 + 0 Parent=MP000290;Rank=1 +##PAF sp|P9WPC9|CLPC1_MYCTU 848 5 804 - NC_000962.3 699930 459488 461984 1236 2598 0 AS:i:1870 ms:i:1862 np:i:565 da:i:-1 do:i:30 cg:Z:68M2D39M1I28M13I11M1D111M1D21M1D128M8D15M9D10M14D27M31D192M12I1M2I3M6I111M cs:Z::1*accD*aagR*acgA*cagR*gcgR*gcgV*ctaV*accV*gcgL:1*ttaQ*cagE*gcgE:1*tcgR*accM*gccL*ggcN*aatH*cccN*gagY:1*cggG*cccT*gctE:1*ctgI:1*atgL*gcgG:1*ctgI*accH*caaE*aacG*gacE:1*atcV:2*ccgK*ctaS:2*gctS*gtcL:1*gtcI*gagS*cccL*gccE*accG:2*gccS*gaaQ*accV*cagE*cgcE*ctgI*ctcI*gacG*cgtQ*ttgG*ccgQ:2-actgga*gccP:1*acgG*cagH*ccgI*cagP*ctgF*tccT*cgcP*gagR*tcgA*ttaK*gcgK*gcgV*atcL*accE*accL*gcgS*cagL*cagR*ctgE:1*accL*gagQ:1*gacG*gacH*gagN:1*gtcI*tccG:3*gtgI*atgL*gtcL:2+I*gccR*accE:1*gacE*tccG*gacV*gtcA:1*aagQ*ctgV:1*accV*ggcK*cacL:2*tcgE*ccgL*cagT*gcgR*ctgV:1*gagQ*gcgQ*ttcV*gtcI*aagQ*gtgL+LSGYQGKEAAEAG*cgcT:1*agcG*gccR*cggG*gtcG*accE:1*cccG*gaaS:1-gag*gcgS:1*tatS*cagL*gcgV:1*cagD*aagQ*tacF*tccG*accR*gacN:3*cgcA:1*cgcM:10*gacE*aacK:2*cgcE:2*gtgM:23*atcV:6*cgcA:2*gccH:1*gacE:3*agcT:1*cgcK:2*accQ*atcL*gtcY*gcgT:5*atgL:4*aaaR:3*gaaD:6*gccK:2*gacK*gacE:1-aag:1*tcgT*gccR:1*caaD:2*acgL:7*atcL:5-acc*ggcA:3*atgI:2*ggcA*aacS*atgI*atcL:2*atgK:6*cggQ*ctgT*gtcI:10*cacY:12*cagP:1*tacQ:4*tcgT:2*gacH:2*ggcE:2*cgcK:2*aaaR:4*gtgA:2*gggR:1*cgcS:3*tcgA:1*ctgM:6*agcA:4*accN*gccD:10*gtcI:3*gccG*agcA:1*ctgM:1*atgI*gagR*atcR*gacM*tcgT*cggA:1*gtcP*gagD*atcL*gacR:1*gtcF*gagD-cggctggtgcgccggctggagatc:1*gagK*atgI:1*ctgE*tccA*aaaR*gaaR:1*gacK:1*gcgS*tcgA*gcgI*gagD-cggttggccaagctgcgctccgagctg:1*gacQ*cagD*aaaF:2*ttgA:1*gagS:1-accacccgctggcagaacgagaagaacgcgatcgaaatcgtc:2*ctcR*aagE*gagK*cagT:1*gaaV:1*ctgQ:1*gggA:1*tccR:1*cggK*gccQ*gaaW:1*gacS:3*gccD*aagV*gccV:1-gagctgcgctacggacgcatccccgaggtggagaagaagctcgacgcggcgttgccgcaggcgcaggcccgggagcaggtgatgctcaaggag:2*ggtD*cccD*gacE*gacQ:2*gacE:1*gtgL*tcgG*gcgN:5*gccV*ggtF*cggK:1*ctgT:1*ggcA:2*gccT*aagR:5*gacE:2*ggcH:2*gtcI:3*aagE*gccD:2*accK:3*gatK:1*gtgI:2*agcT:3*gtgL*tccK:2*aacK:2*accS:1*gcgS:1*atgI:1*ctcA:2*accS:7*gccS:4*gacN:3*gacG:1*gagD*cggD:1*atgL*gtcI*cgcQ:3*agcG:1*tacF*ggcH*gagD*aagR*cacF:1*gtgA*gctS:2*atcF:10*gcgE:6*gcgK:3*cgtK:1*tacF*acgS:11*ccgQ*gacE*gtgI*ttcY*gacN*gtgS:5*gacE*gagD:6*cacQ:6*cgcK:2*atcV:2*ctgF:5+TSDISKPVGLGF:1+KG:2*agcE+NDYERM*gccK*gagQ*cagK:1*ctgN*gccD*gcgE*gtgL*cgcK*gctK*acgH:1*aagR:3*atcL:2*ctcI:2*gtgI*ctcI*atcV:1*gagH*ggtQ:1*aacT*cccR:2*ctgI*gtgI:1*atcM:2*atcL*cagM*ctgI*gcgS*cagR*ctgV*ggcA*aagG*cggQ:1*gcgK*cagS*cggK*cggD*ctgM*cagA:1*cagV*gtcL*tcgT*ctgD*ccgA:2*cgcA*tggL:2*cagK:6*tacL:7*ctgT*gtgI:1*cagR*gccE:1*ggtE:3*gccS*aagE*atgK*ctgI:1*gccF*ggcE*cagE:1*cacG*gacP:1*gatQ*accV:1*ccgT:1*aacD:1 +NC_000962.3 miniprot mRNA 459489 461984 1862 - . ID=MP000291;Rank=1;Identity=0.4758;Positive=0.6524;Target=sp|P9WPC9|CLPC1_MYCTU 6 804 +NC_000962.3 miniprot CDS 459489 461984 1862 - 0 Parent=MP000291;Rank=1;Identity=0.4758;Target=sp|P9WPC9|CLPC1_MYCTU 6 804 +##PAF sp|P9WQ37|FAC13_MYCTU 503 29 503 + NC_000962.3 699930 195145 196597 522 1464 0 AS:i:684 ms:i:684 np:i:257 da:i:0 do:i:57 cg:Z:90M1I16M6D61M1D32M2D40M1I22M2D35M2I16M2D3M1D155M cs:Z::2*tggY:1*gacQ*ctaM*aggN*cgcA*cggL*gttA*gcgN*gcgR*ctgC:1*ggcD*gcaV:1*agcT*ggtA*cgcL:1*gtcI*ggtA*ttcK:4*atgA*atcL:2*cttP:1*cgcS*accV:2*gtcC*gagC*tcgL*gtgF*ctgY*gccG:1*aacA*atgK*atcL:2*atcV:3*ctgI:1*ttcT:2*accA*ccaA*accP:1*atcV*gccS*gtcF*ctgI*gtcL*gaaS:1*tgtS*gtcG*gcaS*cacK:1*atgV*ctgI*accY*gaaG:1*gcgP*ctgS:3*gccI*atcD*ggtA*gtcI:1+A*aacQ*atcA*cagD:1*ttgP*ctgG*agcT:1*atcT*gtgD*gtcW*gccI:1*ggaA*tccD:1-caggacagcgtgttcggc*tatL*gagA*gacE*ctaR:1*aacR*gagS:1*gggA*gatA*gtcD*cacE*gaaP*ccgA:1*gacE*atcC*ccgG*aacG:1*tcgD*ccgN*gccL*ttgF:9*cgcH:3*gccV:1*ctgH:2*gcgE*aacS*ctcV*accH*ggtS*cagA:1*atgS*accS*gcgW*ctcA*tacS:1*agtI*ggcD*gccV*aatR*atcY*aacR-agc:1*gtcR*ggtL*ttcL*gtcL*ggcP*gtcL:1*ctgM:2*atcV:1*ggaA*atcL*ggcT*aacT*atgV*ctgI*accF*gggS*ctgA*ctgM*ctcR:1*ttgV*cccT*acgL*gtgI*atcS*tatM:1-ctgggc*gcgQ:2*ccgA*ggaT*cagK*ctgV*ctcW*gacS*gtgL*ctgI*gagV*gcaE:1*aagR:1*accC*ggcI*atcG*tttG*ctgA:3*cagI*tggL*cagN*gcgF*gtcM*tgtR*accQ*gaaV*cagP*caaE*gcaF*cgaA*ccaE*cgtL:1*ttgA+P*aggD*ttaF:1*gtgY*ttgF*tcgI*tggT:1*gctG:2*gcgM:1*gatE:2*ctgI*cggK*cagI*atgY*tcgA:1-accttt*cccK*gaaN*accI*cagE*ataV*ctgV*gccQ*gcaG*ttcY*ggcA*cagL:2*atgS*tcaC*ccgG*gtcG*accG*tgcT*atgL:2*ggcS:3*atcL*gctR:1*cgcA:2*gtcA:2+AT*gtgM*atcF*ccgT*accD:2*gcaV:1*gtgG*gtcD:1*cagG*aacV*atgI*aacR*gatE-gtcccc*gtcH:2-gtg:2*attV:1*tacI*cggK*gcaS*ccaD*acaI:1*atgL*agcK*tgcE:3*aacR:4*gcgR*gagD:2*gcaD*ggcN:3*catR*tctT:2*ctgI*gttG*cgtE*atgI:1*tccD*gacE:2*gtcL*tggY*gtgI*gtgK:2*aagL:10*attV:1*tgcP:2*ctgI:1*aacS:1*ctgI*gccI*agcG*catV:1*gacG*atcV*gccS:6*cggL*gccP:6*gtgI*ccgA*atcA:1*gtcI*gcgV*gccV*gtaA*acgD*aacQ*gacN*gacE*cttV*cggS*atcE*gaaQ*gacQ*ctaI*ggtV:1*ttcY*ctgC*accG*gacT:6*cacL:2*gcgK*ctcV*gagI*atcF*gtgA*gacE:1*ctgI:4*gcgT:2*gtgI:3*gaaV:2*ttgE*cgcQ:1*ggcS:1*tgtT:1*aatP*gttK +NC_000962.3 miniprot mRNA 195146 196597 684 + . ID=MP000292;Rank=1;Identity=0.3566;Positive=0.5266;Target=sp|P9WQ37|FAC13_MYCTU 30 503 +NC_000962.3 miniprot CDS 195146 196597 684 + 0 Parent=MP000292;Rank=1;Identity=0.3566;Target=sp|P9WQ37|FAC13_MYCTU 30 503 +##PAF sp|P9WQ49|FAD21_MYCTU 578 4 576 + NC_000962.3 699930 483979 485719 789 1752 0 AS:i:1212 ms:i:1212 np:i:354 da:i:3 do:i:12 cg:Z:43M1D9M2D92M4I11M5D198M2D14M1D44M1D157M cs:Z::2*ataL:1*acgL:2*gacE:2*accG*acgL*actQ:1*agcD:1*gaaA:2*gtgT*ttcY*atgI:2*gacE*acaQ*aaaD*accW*ggcA*gacG*caaI*attT*gacE*cgaT*atgL:3*caaE*ttaV*tatF*tctR:1-gtc:1*gccR*gtgI*tctV:1*tatH*ctaE*ataV*agtR-tatggc:2*gctC*gacT*cgaT*cgaG*aggD*accR:1*gcgV:1*tcaL:5*gacA:1*gttI:1*ggaA:3*gcaS*ctgM*tgcQ:2*tggA*acgI*ccgA:3*ccaS*gaaV:1*ctgQ*ggcI*agcG*ctaS*cgcH:1*aagE:1*actV*ggaS*ctgA*gctV*gtaL*ctcA:1*tgtA*gccS*gccP*gacS:1*gtgI:4*caaA*gccV*gaaA*acgE*cggA:1*aggA*gccE*acgH:1*gctH*acaR*catP*gggN*gcgT*tctN*gtaN*actV*acgG:1*gtcI:1*gcgE*ttgI:1*acaS:2+LTGN*gagS:2*ggaF*gatR*aacV*tgtK:2*gatP:1-caactatcagactgg*agtA*tcgA:9*gccR*aacA:1*cgtA:2*gttM*ttaI:1*atgH:2*gttL*acgQ*gaaA:1*gtcF*gacQ:1*attL*atcM*cgtS:3*cgcG*catD*gagR*ggcN:1*gcgV*ccgA*aggP*ttgP*cccD*agcT*tcgT*gtcI:5*cttF:6*atgV*gttL:1*ctcI*tttI*attA:1*ttgI*tttL*gtcG:1*tgtY*ccgR*gttS*atcE:4*gagL:2*atcL*cgtQ*aagR:4*atgL*caaH*ctgS:2*aaaN*cacG*cagS*gcgP*ccaS*tttW:8*gatE:3*gctR:2*tccT*gaaD*gagA:1*atgI*gcgE:5*cacN:1*aatL*acaG:1*atcT*aacS:3*cagR:1*cagH:3*ataL*accS*aaaR:1*ctcC*cgcN:2*cgtA:3*ttgF*atgR*cccE*gcaD*gcgM*gtcI*aagR:4*atgL:3*gtgT*gttL:1*ctgV:1*acgS*acgR*aagN*gcgS:1*tcaD*cctK:1*acgE*tcaV*accV*gagY:1*gatE*gctP:1*agcK:1*gctS*cgaT:1*cacS:1-gagcta*agtN*actR*ttcC:1*actP*gagK*cgtT*gcaG:1*cgtP:1*ataL*cgcS:1-cac*agcG*gacM*gacP*aagT*gaaS:1*ttgT*cttV:6*tcgT*aatC:2*ctcC*ggaP*ccgA:1*cgtT:5*attV*cacK:1*aagD:2*tctA*accE:2*cacW:1*gcaK*gacP:1*gcgE-ctc*aatT:1*gatH*aagT:1*cagG:1*agcM*atcL*cggV*gagH*gccP:5*aggD*tcgG*ccgS:9*ataL*gtaS*ggaE:2*ttcM*tacF:7*ctcM*attL:1*caaV*gacY:1*gtaR:4*gatE:3*actS:2*aagQ:1*tttI:7*tttI:2*tccP*gacV:1*gggH*gtgT:1*catK:2*attT*gcgV*gccI:1*gtaL*aggK*actL*gagL*catG*gggD*cccS*gatA*aaaG*gtgE*actA*attM*atgD*gatE*ttcL*tcgD*acgV:2*aggN*ctgN:1*gtaT*tcgA:1*ttgI:1*aaaR*ttaS:3*catN:1*acaA:1*tttL*cttV:5*gcgS*ctaI:1*aagT:6*agcR:4*gcaV*aagE:2*ggaR*gcaL*aatQ*aagQ*ttgF*caaT:1*gtaL +NC_000962.3 miniprot mRNA 483980 485719 1212 + . ID=MP000293;Rank=1;Identity=0.4503;Positive=0.6062;Target=sp|P9WQ49|FAD21_MYCTU 5 576 +NC_000962.3 miniprot CDS 483980 485719 1212 + 0 Parent=MP000293;Rank=1;Identity=0.4503;Target=sp|P9WQ49|FAD21_MYCTU 5 576 +##PAF tr|Q11028|Q11028_MYCTU 1159 82 1158 + NC_000962.3 699930 463437 466665 1746 3267 0 AS:i:2606 ms:i:2606 np:i:739 da:i:27 do:i:0 cg:Z:43M1I133M1D50M2D4M1I226M3I117M1D24M1D19M5I34M2D126M1D14M1I24M1D10M2I7M4D232M cs:Z::4*ttgT:7*tggR:1*tggS*gagQ:1*catR*ccaL*gacN*gacE*atgL*ggtA:1*gccD*gtgY*gcgP*cgcT:2*aaaQ*gccN*gtgI:1*ggtE*gtgA*attV:3*gacG:2+T:3*gagD:1*ggtE*gagV:1*gatS*agcG*tttL:1*ctcV:2*gccL*tgcR:1*tcgG:2*gtgI:1*gccC:2*gacE:2*cgaL*gcgS*cggT:3*atcM:1*ttgP:1*ataV:5*gagD:1*gcgR:2*gacG*gaaD:1*aacT*tatI*gccT:1*ccgS*accA:2*cggE*accS:1*cgcC:6*gggE:3*gtgL:2*ggcA*gtgA:1*gaaG*agcD:4*cgcQ:2*gacA*aaaN*gcaT:2*gttT:1*ctgV:1*acgK*cacY*gcgP:2*gatG:1*tcgH:1*ccgQ:3*atgI:4*cccR*gaaD:2*atcN*gatE:5*gtgM*gccS*aatV*gacG*gatN-gtg*gccR*catS*ggtS:2*gtgA*cacQ*ctgF:1*cgtT:4*ggcD:3*accN:2*cacQ*cggE*ttgV*gtgL:1*gatN*aacY:5*accR:1*gccE:9*gcgI:1*ctcI:2-cagatc:1*ggtS:2+R*ggtD*cgcG*gcgL*tggC:7*acgA:2*gacG*ttgM:1*ccgS*gtcT:1*gtgA:1*ggcH:4*cacI:1*cagR:2*cgcS:2*acgF:2*gtgL*ctgS*cgcH*tttA*cttI:1*gggN*cgtC*ccaH*gccM:1*gtgM:7*ctgV:3*acgC:1*gccE:2*ttaV*gcgE:1*gtgL*aaaG:2*cggP*gggE*gtgL*aggS*ttgI:3*tgtS:2*ccgS*ctcI*cggG:1*gagT:3*agcT*tacW*cggV:5*ctgP*agcA*gatN:2*gttI*gagQ*atgL:1*tgcT*tacE:2*cagR*cgaL:1*cggQ:1*gacN:1*cgcE*ctcI*accV*gacA:2*tccF*gccD:2*accS:3*aaaR:4*ttgM:13*atgL*acgS*cttP*gacN:2*atcA*gatN*ggcS:1*cgtD:3*gcgR:7*acgS*gccT*gcgV*cacQ:5*tggR:2*gtgM:4*acgA:3*gagD*ccgT:2*accI:10*tgcG:1*tttD*gtcL*gacT*gacA:1*cagS*gcgE:2*tgcA*agcA:1*gatG+DDF:1*cagE:2*cagS:3*gagQ*atcL:9*atgV:1*gacE*gacE*aacS*agcR:1*cggS:1*tgcR:3*tgcL:2*atgV:1*cacQ:6*tccN:1*gctS*ggcE:1*gtgI:1*gccG:1*tttR:4*gacT*tacH:1*acgA*gcgT*ctgM:2*aggG*gtcL*gacN*aatV:1*ggaA*cccS*tccT:2*tcgE*cacQ*tgcR:1*gacL:3*accA:9*gtgT:1*aacS:1*gaaG:1*tccG:1*accI*gagA*ggcA:2*gcgQ:3*tccA:1*ttgQ*cggP*gtaL:1-atg*acgS*cggQ:2*atcM*cagR:2*cgcL:2*tttL*gacE:3*gccE*gacR:1*aatG*gcgD*cgtN:2-gag:1*gcgP:1*gcgG:1*cgcW:5*gacE:1*gccV*ctgI:1*gacK*atcA*ttcW+PATSP*gtcM*gacG:1*gccP*gccD*ggtI*atgV*gagA:2*caaH*cagH:2*gtgA*atcL:2*gagD*gtcA*gatG*gaaD*ccgC:1*ctgV:1*tccA:3*acgV:3-ttgatc*gcgC*gtaG*gcgS*gtaG*gctC*cgcD*gccT*gatE:2*gcgQ*tctP:6*gacE:4*gtaI*gacN:1*cggE:1*aggT:1*gccS:2*cttD*accY*tttW:1*gcgV:1*gatG*gcgI*gtcF*gtgI*gcgS:1*gacQ:1*gtcI*gcgP*gcaL:1*ccgA:2*caaE*gagQ:5*gccD*gcgS:2*gacN*cacR*tccF*aatV*gcgS*ctgR*tggQ:2*tggL*tgtF*ctcA*ggcC*tacL:2*ctgI*atgW*cggE:1*gagD*ctgA*gccN*gcgG:1*gccL:1*caaL*ttcS*ggcR*gagD:1*gtgT*gacA:3*gcgV*tctA*cagN*gaaD:1*ctgV*cacT:1*gccV*aacL*agcG:1*cagY*ggcV*ctgE:1*ttcM:2*gccS:1*cagI:1*gaaD-ttg:4*gcgT*gcgI:1*gacG:6+T:3*gagG*tacI*ttcY*gcgQ*ggtD*atgL:2*tcgG:1*ttgI:1*acgR:8-cag*acgA:1*caaI*catE:4*gccS:1+DL:2*ttgQ*agtH*ttgN*gcgV*ctgV-cccctctcggca*gcgT*gtgA*cagH*cgcH*gcgE*ttcL*aatM:5*gctV*ggtR:2*cttV*agcT*gcaT:3*tggF*tgtA:1*gatE:2*cagL*tcaA*atgS:2*catW:2*gcgM:3*gcgI*actA:3*atcV:1*gtcI:1*gagQ*ggcD*aagE*cggL*gaaG*gaaK:1*gaaR*cgcD:3*aagA:1*ctcV:2*gcgG*gccV*gagG*agcV*gggQ*gcaT*cacY:1*gatA*ctcM:2*gtgA:2*tgcL:5*agcG*gacE:2*accN:1*catG*gcgQ:1*gcaV:6*gagA:1*atcQ:2*cagR*atcT:1*tcgE:2*ttcH*gcgK:1*tacW*cgtD*tcgA*gacG:1*gtgE*cagA*tcgA*gtgT*acgA:7*gagD*aaaE:2*gacT:8*ttgA*tcgP*atcL*aagD:1*acgA:7*cacR*tccG*tggE:4*gccS*accN:2*gaaD*tcgA:3*accA:1*attH*gacK*gtcI:1*cgaK:2*ggcT:3*gccV*aacT:4*acgA:15*gtcI:4*ggcD*ttcV:3*ctgV:2*gctV:1*gcgE:2*cgcQ*cgtH*accS +NC_000962.3 miniprot mRNA 463438 466665 2606 + . ID=MP000294;Rank=1;Identity=0.5344;Positive=0.6786;Target=tr|Q11028|Q11028_MYCTU 83 1158 +NC_000962.3 miniprot CDS 463438 466665 2606 + 0 Parent=MP000294;Rank=1;Identity=0.5344;Target=tr|Q11028|Q11028_MYCTU 83 1158 +##PAF tr|Q6MWW8|Q6MWW8_MYCTU 714 0 714 - NC_000962.3 699930 673208 675916 1314 2466 0 AS:i:1872 ms:i:1909 np:i:493 da:i:0 do:i:138 cg:Z:29M1I94M1D46M3D27M2D24M5D20M1I26M2D7M12D29M1D15M4D6M11D11M2I6M11D14M12D82M3D12M1D26M1D17M3D11M270U82M11D22M3D31M6D31M4I26M2G2M16D8M cs:Z::4*atcL*gcgI*acgS:2*atgV*ctgV*accS*acgA:2*acgG:3*aaaN*attV:4*actS:3+K*accA:4*gtgT*gcgT*aaaQ:2*cccA:1*tcaG:5*gtgA*gccR*gttI:5*acgM*cacY*gccG*cagL:3*accA*gtcI:5*acgA*tttY:1*gacQ*cggQ:5*tccR*gcgT*gccG:1*agcA:2*gtgM*gccL:3*gtcT:4*agtN:2*gccN*gcgL*gtcI:5*gcgT:1*ttcL:6*aacD:2*gacN*ggcA*tccT*cccT-ggg*accP:1*cagG:3*ccaD:2*atcL:1*tacF:1*aacS:4*gggA*tctP:5*cgaA:5*gcgS:3*atcL:4*aacS:5-gtgggtacc:2*gggA*gccP:2*cacN:2*gcgN*ggcA:5*aacR:2*gccV:2*tttA:2*gccI:1-gcggtc:2*aacT:5*accH:1*gggW:3*gtcH:2*gccT:2*gccI:2*aacG-ggcatcgccggtgtc*acgP:1*acgG*tcgN*gccG*agcG*acaW*ccgL*ggtL:1*tccN:1*accG*gctH:6+G:2*aacS:5*gccN:2*gtgW:1*atgL:4*aacI:5*gagT:1-gggccc:5*gcgT:1-gccagcggcgcccacgccaccaacttgggcgctgac:1*caaN:1*ggcA*ggaW*aacL*ggcL:1*aatG:2*gctT:2*accA:2*gtcI:2*cccG*ggcN:4*ctgG*ctcN:1-ctc:1*ggcW*agcL*cacL:1*gccN:2*gctN:2*agcL:3-ggcggagctccc:4*aacT:1-gctaccgggacgtggggtcacaaccttggtgcc:2*accH:8+WL*gccL:1*gggT:3-gccggtggcgccagcgtcggcggcagcgcgcat:1*gcgG:2*gcgG*cccA:1*accS:1*tccG:1*agcA:2-aacggcggcgacggcggcaaaggcgccgacgctatc*agcG:2*cagG:2*gcgG*aacD:2*aggT:2*gacR:2*cagL*gtgL*ggtM*aatG*ggcA:4*gccH:2*cgcT:5*ctcA:1*tttV*ggaN*tccG*gaaG*gcgG*cccA:1*cgcG*cccA:5*accN:5*aacQ*ggcA*ggaA*actL*cagL*gccF:1*gacR:8*gccY:5*tccG:2*gctD-ggcagcatc:2*aatD*gcgG*tccT*gctM*cccA:1*gccL*gcaG:1*tcaT-ccc:2*aatS:2*aacT:2*cctD:3*ggcP:1*gagN:5*ctcA*gcgG*ttgQ*gccL*gccL:1-ggc*cagH*aacS:1*agcV*cagA:2*ggcS:1*gacK:5*aacT:1-gggactcct:4*cacA:1*gccS:3*ctcD*gA~gt267ag-gc*ctgP*cccA:1*ctgS:1*aggA*ctcM:1*aacS*cccT:1*ctgF*gatA:2*accA:2*aacD:2*gccN:2*tccG*ggcS:2*tggS*gcgQ:4*accN:2*gccN:5*gtcK:5*tccA:1*agcM*gacN*ggtS*gtcL*aacD*ggtP*tccL*agcL:1*ggcA*gcgQ:2*cacG*cccQ:5*gttT:2*accN*ggcA:1*aaaA:2*gacT:1-ggggacggcggggccgcacccaacggcgtcgcc*ggcF*agcT:2*cccA*ggcD:1*gccN*ggcA:1*gacN:2*accD:8-cgcggcatt*gacN:3*ggcN*gccT:1*gcgT*ggtA:1*cgcA:1*cagT*gatT:8*aagA:2*cgaT:2*accA*ggcA:1-ccgggcggggccgggccg*gcgT:2*accG:1*agcQ:2*gccN:5*agcN:5*gacK*cccG:1*gacT:2*aacA:1*gctM:1*ggcS+LDPL*agcL*gtgA*ttcA*accQ*aacD*aacG:1*atcQ:2*aacT:2*aacT:5*cccA*agcG:1*gccT:1*gggF*agtT*ggP:2-cggctccactttcggtgcgaccggctcaagcagcagcattcatgtcaa:8 +NC_000962.3 miniprot mRNA 673209 675916 1909 - . ID=MP000295;Rank=1;Identity=0.5328;Positive=0.5998;Frameshift=1;Target=tr|Q6MWW8|Q6MWW8_MYCTU 1 714 +NC_000962.3 miniprot CDS 674194 675916 1396 - 0 Parent=MP000295;Rank=1;Identity=0.5492;Target=tr|Q6MWW8|Q6MWW8_MYCTU 1 506 +NC_000962.3 miniprot CDS 673209 673926 513 - 2 Parent=MP000295;Rank=1;Identity=0.4938;Frameshift=1;Target=tr|Q6MWW8|Q6MWW8_MYCTU 507 714 +##PAF tr|Q6MWX1|Q6MWX1_MYCTU 393 1 393 - NC_000962.3 699930 337923 434679 459 1197 0 AS:i:497 ms:i:568 np:i:204 da:i:0 do:i:135 cg:Z:171M1I7M95186U33M2D14M5D10M1I18M15I21M2I3M1I21M439U72M cs:Z:*atgV*agcD:1*gcgG*gtgA:9*ctgM:1*gtgA:1*gccP:1*ttgS:1*ccgS*atgL*ctgV*gacA:2*gccK*gctM:2*ggaS*ctgV:1*gacS*gaaD:1*ggtF:3*gccS*tcgA:1*tcgQ*gcgS:1*acgV*gcgW:2*gcaT*ggtV*tccG:2*ctgI:1*gcgS*gcgS*tcgA*acgG*gcgL:1*acgA*ggaA:2*gccS:2*ctgV*ggcA:1*ttgM:1*gcgV*gcgT:1*gcgG:3*cagL*gcgT:1*accA:1*accV:1*ctgV:4*ttcY:1*gcaT:1*ctgY*gcgR*gcgL:2*catP:1*gcgP*atcV:1*tcgA*gccE:2*gcaT*ctgE*ttcL*gtgM*tcgT:1*gtgT*gtcA*tcgT:6*gccT:3*gcgE:1*accN*gagQ:3*gagS:3*gccG:2*gtgA*gcgE:2*tttY:2*catA:1*gggT:1*tcgA*gcgT:1*gtcT*tcgE:2*acaL:2*ggcE*cagD:1+P:1*ccgI:1*gtgN*gcgP:2*gL~gt95183ag-ca:1*ctgE*gccQ:1*ggtV:1*gatV:1*gtcE*tcgA*acgI*gcgD*gttT:2*ctgA*ttcN*ggcQ*gccL*cacM*ggcN*cagN*gccV*tatP:3*agcQ*gccQ*caaL:2*gcgP-tttcat:2*ttcG:1*cagV*gcgP*ttgS*accS*tccK*ggtL:2*gcgL*tacW-gccgccgccgaggcc*gccT:1*accV:2*ctgH:1*gccS:1*atcL+S:1*gagV*ttcS*ttcS*ctgI:2*accN*gggH*cgcM*ccgS*ctgM*atcM:1*aacT:1*accV*aacS+MTNTLHSMLKGLAPA*ggcA:1*cccQ*ggcA*accV*gggE*gccT*aatA*ggcA*gggE*gacN:1*ggcV:1*ttaA*atcM*ggcS*aacS*ggcL:1*gccS+QL:1*ggaS:1+L:1*gcgS*gccS:1*gtcL*aacG*ggcA:1*gccV*ggcA*ggcA:1*ggcL:1*gccR*ggcA*gggA*ctcS*atcV:1*aacS*gL~gc436ag-cc:5*gcgW*ccgA:2*gcgN*gcgQ*gatA*ccaV:1*cggP*acgA*gtgA*gcgR:1*gtgL:1*gtgL*ggaT:1*gagL*gcgT*acgS:2*cgtQ*tgtT*tcgA*gctP*ccgG*gcgH*gcgM*ccgL*gcgG*gcgG*tctL*gcgP*ggcL*tggG*gctH:1*acgV*ccgN:2*cggS*gcgG*gcgI*ccgN*gcgN*gaaA*aggL:2*tgcP*tcaA*tcgR*gggA*cggY:1*gtgI:1*gcgR*gcgT:4 +NC_000962.3 miniprot mRNA 337924 434679 568 - . ID=MP000296;Rank=1;Identity=0.3835;Positive=0.5113;Target=tr|Q6MWX1|Q6MWX1_MYCTU 2 393 +NC_000962.3 miniprot CDS 434145 434679 449 - 0 Parent=MP000296;Rank=1;Identity=0.5056;Target=tr|Q6MWX1|Q6MWX1_MYCTU 2 180 +NC_000962.3 miniprot CDS 338578 338961 51 - 2 Parent=MP000296;Rank=1;Identity=0.2585;Donor=GC;Target=tr|Q6MWX1|Q6MWX1_MYCTU 181 320 +NC_000962.3 miniprot CDS 337924 338141 68 - 2 Parent=MP000296;Rank=1;Identity=0.3333;Target=tr|Q6MWX1|Q6MWX1_MYCTU 321 393 +##PAF sp|A0A089QRB9|MSL3_MYCTU 2085 0 932 + NC_000962.3 699930 486030 534399 1047 2856 0 AS:i:1322 ms:i:1359 np:i:494 da:i:300 do:i:27 cg:Z:43M1I6M10I73M1D202M4D94M1D9M1D34M4I45M2D64M2D94M4I136M2I44M2D21M45600N4M4I15M7D3M4I16M cs:Z:*ggtM:1*ggcT*agcA*ataT*aacA*gagT*ccgS:5*gtgM*ggcA:2*tttL:2*gatG:2*ggcS:1*gaaQ:3*gacE*tttA:1*accL*gagR*aagG*aagD*tgtD*gcgL*ataV*acaG*gcgE*tatI:1+A:2*gggW*ttcD*acgA:1+VYYDPEPGVP*gctG*ggaR*actS*ttcV*gcgS*gagR*tccW:1*ggcA:2*aagD:2*gcgG:3*aatC*agaD:2*gatG*atcL*ccgT*ccgE*gacR:2*ctgT*cgaA*atgI:3*caaH:10*ttaI:4*attV*attD:1*gagA*tcaT:1*agaA*cttE:1*cgtQ:6*gtgL*tcgT*tcaH*actG:2-gtc*cggE:1*gtgL:2*agcD*gctC*cagG*caaA*aagA*tctE*actG*attP*tggY*gatG*aacF:2*ggtT:1*tcgN:1*attF*attA*gccS*aatG:1*atcV*tcaA:1*tttT:1*gatG*attL*cagH:2*tccA*attV*gtcT*attV:6*tccG:1*gtcT:3*ctaQ:5*agtD*accD*tggG*gacE*tgcS:1*atcL:2*gtcA:2*acgV*aatV:1*cttT*attL*tcaE:1*gaaR*ccaK*tggS*ggtV*gggS*tttG*aggS*gaaL*gcgQ:1*atcM:2*cagP:2*tgcR:5*aaaE*tccA:3*atgF:1*cgcS:4*ggaV:1*atcL*gtgL:1*cagK:2*agtP:2*cgcV*cttR*gagD:1*cggD:1*ataV:3*ctgV*acgR:1*tcaT:1*gtcA:4*aagR*tccT*aacV*ggtN:1*atgA:2*aatS*cctA*agtQ:3*ggtA:1*cttY*gaaQ*aatQ:1*tgcL*aagA*agcA:1*cgcG:1*gatE*ccgA*ctgS*gaaT*atcV:1*tacM:8*tcgP*ttaV:2*aggP*atcV:1*gcgY*cacA*gccS:1*ggcA*atgA:1*tttY:1*cgcT*aagE-agaccgggatct:2*ctgC*atgA*atcL*gggT:1*atcV:1*ccgT:1*atcF:3*gaaQ*ggtS:1*gctS:1*atcP*gccL:2*atcM:1*gcgT*gtgI:1*atgA*gttL*gagR*cgtH:1*tcgV*ctgV*cttP*ccgQ*agcN*gggL*gggH:1*acgC*gagR*ccaL*aatP*ccaD*gctQ*atcL*ccaA*ttcE*acgI*gaaD*ttgT*ggcE:1*agaF:1*gtaP*gacQ*gaaA*cttN*cagT*gagS:2*gtgD*gtgN*gcgT:1*cggQ:4*gggA:3*ttcY:1*tttM*ggcS:3*gcgV:1*gtgA:1*gtcL:1*gaaQ:1-ggt*tcgP:1*gggS*gcgE*gacP*acgA*gttA:2-cgc*gcgP*gatE*gttL*ggcT*ggtP*tccE*ggtA:2*gtgL*gtgA*gcgL*tggF*gtgP*attV:1*gggA*aagT*acgS:1*tcgE*gcgQ:1*gctH*gctV*cagT:1*ggtA:2*gggA*cggD*tatW:1+DQNG*cggN:1*cggG*ccgS*gcgR*cttV*gatS*gttM*gttR:1*gtgL:2*tcgT:1*gtgS*agcC*acgR:1*tcgA*gtgH*tttR*gatP*catV:1*gcgT:2*gtcT*ggcA*cagS*actS*cgcF:3*ctgS:1*gggA:1*gctR*gggD:1*gttA*gctG-ggtcgg*ccgD*gagQ*gctI*gggP*gtgY*gtcQ*tgcP*ggtA:2*aagH*ccgD*gcgD*ggcR*aagG*acgP*gctV*tttW:2*gccS:6*ctgP:3*agcT:2*tatL*gctV:1*tacE:4*gagA*gccT*ctcV*gatA:1*gtgM*gtgE*gacP*gagV*ttgI*gacA:1*cacE*ctgS*cggG*tatF*ccgS*ctgV*cgcT*gatE*gtgA*atcM-tggggg*cacS*gacA*caaP*gatQ*ctgT*ttgV*aatS*accG*accI*gaaD*ttcR*gccV:2*gcgT*ctgI:3*gagQ:3*tatA*cggA*ctgA:1*atgK:1*tggY:5*ttgA*gtgI*ctgI:3*gtgL:2*ttgA:3*cacV:5*tgtS:1*ccgH:1*gcgG*gcgL*atgR*ctgV*gtgI*gccC*gcgR:1*ggaS:3*cagS*gcgR*ttgI*cccA*gccG*ggcS:3*tttA*gcgS:1*cagE*gccL*cgtP*gaaG*gacQ*gagQ:1*gcgL*ccgS*atgE:1*gggA+IRGI*cacS:2*agcV*atcL*gcgS*gcgV:1*aatA*ggtS:1*gctT:1*gtgT:1*atcV*tctG:2*cacT*gatQ*gcgS*gtgI*agcR*gcgD*atcL*gctV*gatA*cggA*ctgW*cgcE*ggcQ:1*ggcD*cgtV*cggL*gtcA*cacR*cggE*ttgV:2*tcgD*catV:1*tttS:1*tcgT*gcgP*ttgQ*atgV*gagD:1*atgI*atcL*gctD:1*ttcL*acaL*gccE:1*gcgL:2*ctgV*tctD*gtgP*ggcT*ttgA:1*acgE:2*gtcY*attY:1*aatA*gtgT*accL*gggW*cagD*ttgP*gtgR*gccE*gacR*gacP*ttcS*gccF*tcaT*gctG*gatE:2*gccV*cggE*catN*atcL:1*gcgY*gtgT:3*ggcA*gacA*agtA:1*cgtQ*agtA:1*cacL*tgcK*gccD:1*gccY*agtR*cgtV:1*atcG:1*gtcL*gggA:1*ggtH*ggcP*ggcL:2*tcgY*ttgA*atcV:1*gcaQ*tcgN*ctgA:1+SL:1*gcgM*cagP:1*gtgA*tcgT*gtgL*cccA*acgA*ctgM:1*aaaR*gatG*cggE*cccQ*gaaL:1*gtcF*agtG*gtgL*atgR*acgG*gcgF*gcgV:1*cagD*ggcV*ttcH*gtcN*tcgA:1*atgA*ggcK*ctgV:1*tggF*gccS*tcgV*gtgQ*tttY*tccP*gggD*tacG:1-cccaag*cggL:1*gagD*ttgA:1*acgL*tatP*gccS*ttcW*cagT:1*caaR*aagT*ttcL*tggM:1*gcaS*ccaR*gccE*ccaD:1~gt45600ag:1*ccgR*catS:1+TGAV:1*tccA*ataV:2*cgaL:2*gtgA*gtcH:1*gaaH*ttcL*ggcL:1-tgcggcctggtcgtgaccagc*gacE:1*gcgE+RHVW:1*cagA:2*cagG*gtcT*gctG:1*cagH:2*cggL*tccG*ggtD:2 +NC_000962.3 miniprot mRNA 486031 534399 1359 + . ID=MP000297;Rank=1;Identity=0.3666;Positive=0.5189;Target=sp|A0A089QRB9|MSL3_MYCTU 1 932 +NC_000962.3 miniprot CDS 486031 488664 1308 + 0 Parent=MP000297;Rank=1;Identity=0.3682;Target=sp|A0A089QRB9|MSL3_MYCTU 1 886 +NC_000962.3 miniprot CDS 534265 534399 51 + 0 Parent=MP000297;Rank=1;Identity=0.3396;Target=sp|A0A089QRB9|MSL3_MYCTU 887 932 +##PAF tr|I6X8E6|I6X8E6_MYCTU 112 0 112 - NC_000962.3 699930 65014 65350 336 336 0 AS:i:652 ms:i:652 np:i:112 da:i:0 do:i:0 cg:Z:112M cs:Z::112 +NC_000962.3 miniprot mRNA 65012 65350 652 - . ID=MP000298;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6X8E6|I6X8E6_MYCTU 1 112 +NC_000962.3 miniprot CDS 65015 65350 652 - 0 Parent=MP000298;Rank=1;Identity=1.0000;Target=tr|I6X8E6|I6X8E6_MYCTU 1 112 +NC_000962.3 miniprot stop_codon 65012 65014 0 - 0 Parent=MP000298;Rank=1 +##PAF tr|L7N657|L7N657_MYCTU 161 0 161 + NC_000962.3 699930 193625 194108 483 483 0 AS:i:813 ms:i:813 np:i:161 da:i:0 do:i:0 cg:Z:161M cs:Z::161 +NC_000962.3 miniprot mRNA 193626 194111 813 + . ID=MP000299;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N657|L7N657_MYCTU 1 161 +NC_000962.3 miniprot CDS 193626 194108 813 + 0 Parent=MP000299;Rank=1;Identity=1.0000;Target=tr|L7N657|L7N657_MYCTU 1 161 +NC_000962.3 miniprot stop_codon 194109 194111 0 + 0 Parent=MP000299;Rank=1 +##PAF tr|O06296|O06296_MYCTU 136 0 136 + NC_000962.3 699930 415049 415457 405 408 0 AS:i:690 ms:i:690 np:i:136 da:i:6 do:i:0 cg:Z:136M cs:Z:*ttgM:135 +NC_000962.3 miniprot mRNA 415050 415460 690 + . ID=MP000300;Rank=1;Identity=0.9926;Positive=1.0000;Target=tr|O06296|O06296_MYCTU 1 136 +NC_000962.3 miniprot CDS 415050 415457 690 + 0 Parent=MP000300;Rank=1;Identity=0.9926;Target=tr|O06296|O06296_MYCTU 1 136 +NC_000962.3 miniprot stop_codon 415458 415460 0 + 0 Parent=MP000300;Rank=1 +##PAF tr|O06409|O06409_MYCTU 100 0 100 - NC_000962.3 699930 635575 635875 297 300 0 AS:i:517 ms:i:517 np:i:100 da:i:-1 do:i:0 cg:Z:100M cs:Z:*gtgM:99 +NC_000962.3 miniprot mRNA 635573 635875 517 - . ID=MP000301;Rank=1;Identity=0.9900;Positive=1.0000;Target=tr|O06409|O06409_MYCTU 1 100 +NC_000962.3 miniprot CDS 635576 635875 517 - 0 Parent=MP000301;Rank=1;Identity=0.9900;Target=tr|O06409|O06409_MYCTU 1 100 +NC_000962.3 miniprot stop_codon 635573 635575 0 - 0 Parent=MP000301;Rank=1 +##PAF sp|O06428|NPPPS_MYCTU 335 0 335 + NC_000962.3 699930 652770 653775 1002 1005 0 AS:i:1659 ms:i:1659 np:i:335 da:i:-1 do:i:0 cg:Z:335M cs:Z:*gtgM:334 +NC_000962.3 miniprot mRNA 652771 653778 1659 + . ID=MP000302;Rank=1;Identity=0.9970;Positive=1.0000;Target=sp|O06428|NPPPS_MYCTU 1 335 +NC_000962.3 miniprot CDS 652771 653775 1659 + 0 Parent=MP000302;Rank=1;Identity=0.9970;Target=sp|O06428|NPPPS_MYCTU 1 335 +NC_000962.3 miniprot stop_codon 653776 653778 0 + 0 Parent=MP000302;Rank=1 +##PAF tr|O07421|O07421_MYCTU 184 0 184 + NC_000962.3 699930 208416 208968 552 552 0 AS:i:939 ms:i:939 np:i:184 da:i:0 do:i:0 cg:Z:184M cs:Z::184 +NC_000962.3 miniprot mRNA 208417 208971 939 + . ID=MP000303;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07421|O07421_MYCTU 1 184 +NC_000962.3 miniprot CDS 208417 208968 939 + 0 Parent=MP000303;Rank=1;Identity=1.0000;Target=tr|O07421|O07421_MYCTU 1 184 +NC_000962.3 miniprot stop_codon 208969 208971 0 + 0 Parent=MP000303;Rank=1 +##PAF tr|O07432|O07432_MYCTU 143 0 143 + NC_000962.3 699930 219485 219914 429 429 0 AS:i:742 ms:i:742 np:i:143 da:i:0 do:i:0 cg:Z:143M cs:Z::143 +NC_000962.3 miniprot mRNA 219486 219917 742 + . ID=MP000304;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07432|O07432_MYCTU 1 143 +NC_000962.3 miniprot CDS 219486 219914 742 + 0 Parent=MP000304;Rank=1;Identity=1.0000;Target=tr|O07432|O07432_MYCTU 1 143 +NC_000962.3 miniprot stop_codon 219915 219917 0 + 0 Parent=MP000304;Rank=1 +##PAF sp|O07778|HK1_MYCTU 168 0 168 - NC_000962.3 699930 697906 698410 501 504 0 AS:i:881 ms:i:881 np:i:168 da:i:615 do:i:0 cg:Z:168M cs:Z:*gtgM:167 +NC_000962.3 miniprot mRNA 697904 698410 881 - . ID=MP000305;Rank=1;Identity=0.9940;Positive=1.0000;Target=sp|O07778|HK1_MYCTU 1 168 +NC_000962.3 miniprot CDS 697907 698410 881 - 0 Parent=MP000305;Rank=1;Identity=0.9940;Target=sp|O07778|HK1_MYCTU 1 168 +NC_000962.3 miniprot stop_codon 697904 697906 0 - 0 Parent=MP000305;Rank=1 +##PAF tr|O33316|O33316_MYCTU 134 0 97 - NC_000962.3 699930 80184 80511 258 327 0 AS:i:421 ms:i:421 np:i:87 da:i:138 do:i:396 cg:Z:34M12D63M cs:Z:*gtgM:11*ttcC*cgtG:4*ccgE*tttL*cctR:1*ctgA:2*tttV*cccS:1*tagQ*cttP:4-gcaggtgaaggtgagtttgtcgatatcggttgagcc:63 +NC_000962.3 miniprot mRNA 80185 80511 421 - . ID=MP000306;Rank=1;Identity=0.7890;Positive=0.7982;StopCodon=1;Target=tr|O33316|O33316_MYCTU 1 97 +NC_000962.3 miniprot CDS 80185 80511 421 - 0 Parent=MP000306;Rank=1;Identity=0.7890;StopCodon=1;Target=tr|O33316|O33316_MYCTU 1 97 +##PAF tr|O53673|O53673_MYCTU 159 0 159 - NC_000962.3 699930 302175 302652 477 477 0 AS:i:841 ms:i:841 np:i:159 da:i:0 do:i:0 cg:Z:159M cs:Z::159 +NC_000962.3 miniprot mRNA 302173 302652 841 - . ID=MP000307;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53673|O53673_MYCTU 1 159 +NC_000962.3 miniprot CDS 302176 302652 841 - 0 Parent=MP000307;Rank=1;Identity=1.0000;Target=tr|O53673|O53673_MYCTU 1 159 +NC_000962.3 miniprot stop_codon 302173 302175 0 - 0 Parent=MP000307;Rank=1 +##PAF tr|P71699|P71699_MYCTU 208 0 208 - NC_000962.3 699930 46583 47207 624 624 0 AS:i:1025 ms:i:1025 np:i:208 da:i:0 do:i:0 cg:Z:208M cs:Z::208 +NC_000962.3 miniprot mRNA 46581 47207 1025 - . ID=MP000308;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P71699|P71699_MYCTU 1 208 +NC_000962.3 miniprot CDS 46584 47207 1025 - 0 Parent=MP000308;Rank=1;Identity=1.0000;Target=tr|P71699|P71699_MYCTU 1 208 +NC_000962.3 miniprot stop_codon 46581 46583 0 - 0 Parent=MP000308;Rank=1 +##PAF tr|P96274|P96274_MYCTU 302 0 302 - NC_000962.3 699930 516897 517803 906 906 0 AS:i:1580 ms:i:1580 np:i:302 da:i:0 do:i:0 cg:Z:302M cs:Z::302 +NC_000962.3 miniprot mRNA 516895 517803 1580 - . ID=MP000309;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96274|P96274_MYCTU 1 302 +NC_000962.3 miniprot CDS 516898 517803 1580 - 0 Parent=MP000309;Rank=1;Identity=1.0000;Target=tr|P96274|P96274_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 516895 516897 0 - 0 Parent=MP000309;Rank=1 +##PAF sp|P9WG77|THID_MYCTU 275 0 275 - NC_000962.3 699930 507760 508585 822 825 0 AS:i:1409 ms:i:1409 np:i:275 da:i:-1 do:i:0 cg:Z:275M cs:Z:*gtgM:274 +NC_000962.3 miniprot mRNA 507758 508585 1409 - . ID=MP000310;Rank=1;Identity=0.9964;Positive=1.0000;Target=sp|P9WG77|THID_MYCTU 1 275 +NC_000962.3 miniprot CDS 507761 508585 1409 - 0 Parent=MP000310;Rank=1;Identity=0.9964;Target=sp|P9WG77|THID_MYCTU 1 275 +NC_000962.3 miniprot stop_codon 507758 507760 0 - 0 Parent=MP000310;Rank=1 +##PAF sp|P9WHQ5|PSD_MYCTU 231 0 231 - NC_000962.3 699930 525389 526082 690 693 0 AS:i:1183 ms:i:1183 np:i:231 da:i:-1 do:i:0 cg:Z:231M cs:Z:*gtgM:230 +NC_000962.3 miniprot mRNA 525387 526082 1183 - . ID=MP000311;Rank=1;Identity=0.9957;Positive=1.0000;Target=sp|P9WHQ5|PSD_MYCTU 1 231 +NC_000962.3 miniprot CDS 525390 526082 1183 - 0 Parent=MP000311;Rank=1;Identity=0.9957;Target=sp|P9WHQ5|PSD_MYCTU 1 231 +NC_000962.3 miniprot stop_codon 525387 525389 0 - 0 Parent=MP000311;Rank=1 +##PAF sp|P9WHY7|PPE47_MYCTU 435 0 422 + NC_000962.3 699930 339363 340932 630 1311 0 AS:i:773 ms:i:802 np:i:262 da:i:0 do:i:39 cg:Z:2M2I170M1D28M1D9M5I15M1D26M2I7M1I28M3D13M2D15M2D18M1D5M3I15M3D4M298N1M2G33M1D19M cs:Z::2+AP*ctgV:1*atgL:12*agcA:6*gtgL*ttgQ*tcgA:2*gggA*gtgG:2*tcgA:9*gacQ:2*ataS*gggV*ctgV*ctgV*ggcA:2*cagG*accA:1*gctV:6*gcgE*gctL*tatF:3*cacY*gcgV:2*ctcV:3*atgV*cggQ:2*gaaA*accD:2*gaaA:2*gccG*cggE:2*accA*gtgA:2*gccG:1*acgV*accC:1*gtgL:1*gccE:4*gtcP:6*acgL*cttT:1*gggA:22*gcgV:3*acgV:3*agcT*acgV:1*gcgS*accA:1*caaE:2*gccV*gagG:2*gtgL*gcgV*tcgA*gcaT:1*cagH:1*accG:2-ccg:1*atcV*ttgI*gcaV*gccK*gaaP*gcgG:1*gacN*gatE*gacA*cacS*gatN*catA*gacV*cacA*gatA*cacA*gggT*ggcI*gaaT:1*accF:1*ctgF*gacG*tatE:1-gtc:1*gagK*ataF:1*cgcE*atcM*atcA*agcA*ggtQ+AFTEV:1*cgcE:2*tggM*gatK*cccS:2*ggcA*accW*atgA*aacV:1*atcF-ccg*ttcV:1*gatL*tatI:1*gacG*gcaL*gccV*caaN*ccaF*atcE*tggP:1*gttL:1*cgtL*gccT*atcG*gaaM*ttcI*agtD*aagM*gacF:1*gaaA:1+VG:1*gttA*cagL*gaaG*ctgV:2+L*aatV:1*gtgL*gagL*gcaE:1*cagA*ttcV*tacV*tttL:2*ctaA*ttgI*ttcL*gacS*tacI*ccgG*accW*cacI:1*gtgS*cagN:1*gttF*gagG:1*ttgI-agccagtcc:1*cagV:1*ctgG*gcgG*gtcP*gcaL:2*tccA*gtcL*atcA*tccA-aacttg*ggtA*gcgV:1*accP:1*ttcV:3*tccA:1*ttgV:2*atgL-cagccg:2*atcL:2*ctaV*gcaG*cccA*gtcA:1*gcgG:2*tcgA*acaA:1*ccgV*gcgG-gtc*gcgS*atgV:2*accV+SGG*atgV*gccV*gcgS:1*ggcQ:1*gcgR*gttL*gcgV:2*gccV*gcgE:2-tccgcgccg*gcgP:3~gt298ag:1*caV:1*acgV*gtgL:7*catA:3*gccV:3*cgcG*aggK:1*gcgS:1*gccG*gacQ*gcgP:2*atgL:1*acgV:2-ggc:1*gatE:4*ccaA*acgP*acgV:2*gtgL:4*gatG:2 +NC_000962.3 miniprot mRNA 339364 340932 802 + . ID=MP000312;Rank=1;Identity=0.4805;Positive=0.5995;Frameshift=1;Target=sp|P9WHY7|PPE47_MYCTU 1 422 +NC_000962.3 miniprot CDS 339364 340470 647 + 0 Parent=MP000312;Rank=1;Identity=0.4581;Target=sp|P9WHY7|PPE47_MYCTU 1 368 +NC_000962.3 miniprot CDS 340769 340932 155 + 0 Parent=MP000312;Rank=1;Identity=0.6364;Frameshift=1;Target=sp|P9WHY7|PPE47_MYCTU 369 422 +##PAF sp|P9WHY7|PPE47_MYCTU 435 0 432 + NC_000962.3 699930 349934 351458 639 1545 0 AS:i:817 ms:i:817 np:i:261 da:i:0 do:i:15 cg:Z:191M14D6M14D7M4D16M6I5M1I109M6D5M3D18M33D39M1D16M8D13M cs:Z::1*gccT:2*atcV:1*atgL:12*aatA:7*gtgQ:3*acgA*gccG:2*cagA:6*tcgA*acgV:1*gcaQ:3*gggV*ctaV*ctgV*gggA:2*cctG*ggtA*tggG*gcaV:7*tggL*tacF:3*catY*ttgV:6*acgV:5*gccS:1*ggaA:2*gccG*cagE:6*gccG:1*accV*actC:3*gccE:4*gcgP:6*gtgL*attT:1*accA:15*acgA:10*ttgV:3*gccT:2*ggtS*cttA:1*cagE:1*gctV*tcgV:4*gctV*tcgA*gcgT:1*cgcH:1*gtcG:3*acgV*gttI*atgV*aatK:2*ggcA*ggtN*gcgE:2*actN*gtcA*gggV:1*gtcA-aacccctggcagtggctcttagcgttgcttcaacagctctgg*aacA*gccT*tacI:1*ggtP:1-tacgggtggatgttgcagctcatctggcagttcctgcaggat:1*attF:1*aacE*tcgL*atcA:1-atcatcatcgcc:2*acgE*aatM*cccA*attA:2*ctgF*atcT*actE*tacV:1*ccgE:1*ttgI+MKSAEA*ttcW:1*ctgV:1*tacF+V*cagE*attL*ttcI*ttcT*aacG:2*ggcN*tggF*ccgE*accP:1*ggcL*atgV*atcL*ttgT*agcG*tcgM*ccgI*ttcD*ttgM*ttgF*ccgF:1*gggT*ctcV:1*ctgF*ggcA:1*gcaG*gcaV*ataF*gccV*tttL*ctaV:1*attL*gtgL*cttE*gcgF*cccA*gcgV:1*attL*ccgE*ccgL:1*agtI*actL*ccgS*ctgI*gctG*gctW*gccI*gccI*gtcS*gccN*gccI*gggF*tcgG*gtgA*tggI:1*gcgV*gtcL*agcG*atgG*gccP*gtaL*acgL:2*ggcL*accA:1*gggA*gctV*gcgV*acgP*cccG*gcgV:2*gcgL:1*ccgG*tctV:2*gcaL:1*ccgA*gccL:2*gctV*cccG:1*accA:1*agtG*ttcA*gccP*tatA:1*gtgL*ggtV:1-agcggtgattgggggccg:1*ttgV*gggA:1*acgV-gtaggtggt*cgcS:2*atcV*aagV*gcgS:1*gccQ:1*acgR*gttL*ccgV*gcgS:1*gccV*gcgE*gcgP:1-gcaactcgtgggcagtcgcgcgcgcggcggcgccggcggtctgaattgcgggactacggcgacgagttcttggacatggattccgatagcggtttcggc:1*tcgA*acgS*ggcT*gacS*cacV*ggcS*gcgV*cagL:2*gaaD:4*acgA:3*gccV:3*accG:2*cgcS*cggV*gtcG*cggQ*gcgP*gtcA:3*gcaV:2-ggt:4*aacD:1*cccA*cggP*atgV:2*gtgL:2*accS:1-gagcagggcagcaacgagcccgag*gcgG:2*ggaL*tcgV:1*agaV*gggA:1*ggcD*gacG:2 +NC_000962.3 miniprot mRNA 349935 351458 817 + . ID=MP000313;Rank=2;Identity=0.4136;Positive=0.5068;Target=sp|P9WHY7|PPE47_MYCTU 1 432 +NC_000962.3 miniprot CDS 349935 351458 817 + 0 Parent=MP000313;Rank=2;Identity=0.4136;Target=sp|P9WHY7|PPE47_MYCTU 1 432 +##PAF sp|P9WHZ3|PPE44_MYCTU 382 0 382 - NC_000962.3 699930 403345 468001 465 1165 0 AS:i:499 ms:i:556 np:i:202 da:i:0 do:i:150 cg:Z:165M8I13M2I1M39958V42M7I10M2D15M3I37M1F9M23614N10M4D37M6I16M cs:Z::9*atcV:4*atcM:1*tccG:1*cccA:1*tccA*aggA*cccD:1*atgL*caaA:5*caaN*cggG*ctgI:1*aacV:1*ctgV*accS*gcgT*acgA:1*gctS:1*tacV*tccG:3*tccT*gggR:1*accS*ggcT*gatE*gacH:1*ctgM:2*tcgA*gcaS:6*gccV*gtcQ:2*gtcL*gcgV:1*atgL*aggT*gccC:2*gccE:1*gccS*gagA*cagL:5*gtgM:1*gcgS:1*aacA:1*tacF:1*tcgT:1*tacF:1*gcgL:4*acgA*gtaE*atcV*gcgV:3*cgcA*acaL*atgL*ctgA*tcaE:1*gtcT*cagA:2*gttI*tttL:3*accV*ccgS:3*actA*agtT:1*acgA*cacR:6*catQ:1*atcA*ttgS:2*gacY:3*ggcA:2*gggA*gccV:1*tccA*cagR:1*cgcN+PLTRPSHI*cgtT*tcaN:2*accG*ggcL*gacA:2*cggA*ggcA*cggA:1+GQ:1*gaG~gt39955ag-t:1*gcgS*gacA:2*acgR*ccgQ*gctV*aacG:2*ggaH:1*tccI*aacS*gtcD*ggcV:2*ctgA*accV*ggcL*gtgS*ctcF*cgcA*ggcS:1*aacV*gggM:1*accA*ttcA*aacD*gcgT:2*gcaE*aacA*ctcV*ggcR:2+LNLDVPL*aacF:1*ggcE:2*aacF*ctcH:1*agtL*gcaG-aacctc:1*agtV:1*aacD*ctcF*ggcA*agtT:1*aacA*ctcI:2*tcaM*aacT*gtcL+LAD*ggcA*ttcM:1*aacT*attV:1*aacG:1*aacA*atcP:2*gcaG*aacA*atcA*ggcA*gacA*tttV*aacA*gtcH*gggA*atcV:1*aacP*accA:1*ccgV:1*ctaG:2*gctL*gtcT*aacA*aacD*atcL:1-a*tcgN:1*acaS*ccgV*gcaV*actG*acaR*acaL:1~gt23614ag*gcgV:2*ccgS*gccW*gctS*cccT:3-gtgaaaggcctc*ggcA*atgT:4*aagA*cggL*cctD:1*gccT*aagG*aaaW:1*gccV:1*acgE*cccE*gcgD*gccG:1*gctI:1*cccV*gccM*gcgP:1*gttA*aaaP:1*ctgM*ggtV*attV:2*ggcN*gccS+VGADSG*aagP:1*cccY:1*gcgV:1*aagP*acaI*cctV*cccM:1*gctK*cctH:2*gccF +NC_000962.3 miniprot mRNA 403346 468001 556 - . ID=MP000314;Rank=1;Identity=0.3991;Positive=0.5202;Frameshift=1;Target=sp|P9WHZ3|PPE44_MYCTU 1 382 +NC_000962.3 miniprot CDS 467463 468001 453 - 0 Parent=MP000314;Rank=1;Identity=0.5000;Target=sp|P9WHZ3|PPE44_MYCTU 1 189 +NC_000962.3 miniprot CDS 427161 427507 45 - 1 Parent=MP000314;Rank=1;Identity=0.2872;Frameshift=1;Target=sp|P9WHZ3|PPE44_MYCTU 190 313 +NC_000962.3 miniprot CDS 403346 403546 58 - 0 Parent=MP000314;Rank=1;Identity=0.3288;Target=sp|P9WHZ3|PPE44_MYCTU 314 382 +##PAF sp|P9WI43|PPE04_MYCTU 513 0 513 + NC_000962.3 699930 349934 351473 1539 1539 0 AS:i:2668 ms:i:2668 np:i:513 da:i:0 do:i:0 cg:Z:513M cs:Z::513 +NC_000962.3 miniprot mRNA 349935 351476 2668 + . ID=MP000315;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI43|PPE04_MYCTU 1 513 +NC_000962.3 miniprot CDS 349935 351473 2668 + 0 Parent=MP000315;Rank=1;Identity=1.0000;Target=sp|P9WI43|PPE04_MYCTU 1 513 +NC_000962.3 miniprot stop_codon 351474 351476 0 + 0 Parent=MP000315;Rank=1 +##PAF sp|P9WJU1|MMPLA_MYCTU 1002 0 967 + NC_000962.3 699930 597273 599985 870 2919 0 AS:i:1040 ms:i:1040 np:i:475 da:i:75 do:i:117 cg:Z:125M1I237M4D11M4I92M2I7M15I13M4I19M5I60M9I15M13I21M5I19M1I15M9I4M2D6M1I254M cs:Z:*atcM:1*ctgG*ctcC:1*ctgV*ggcA*ttcL*accA*gccL*tttV*gtcL*aatP*ctcM:3*caaS:1*gaaA*gtgE*gtcM*ggaA*aaaQ*gcaR:1*tcgP:1*tcgA*atgV*agcL:1*agcA:2*gcaP:1*attS*cagV:1*atcV*aagR*cgcQ*gttM*ggtA*cagE*gtgA:1*ggtH:1*tttS*gatG:1*gatE:1*gcgI*gtaL*acgV*atcV*gtgL:1*gaaT*ggcD*gacE*cagK*ccaG:2*gggA*gacA*gcgD*cacE*cggN*ttcV:1*agcH*gatT:1*atgV*cggD*aagR:1*tccR*gccN:1*accA*cgcK*catD:1*gcgV*cacM*atcL:3*tggL*gggT*gatT:1*ctgP*acaL*gcgR*gcgE*ggaV*tccL*caaG:1*gcgK:1*gatG*cggK:1*gccW*tacI*gtcL*gtgP*gtgI*tacG:1*gtcA:1*aacD*aacL*gaaG:1+P*gaaK*gcgS:1*gacH*tcgA*gtcY*cacT*gcgD:1*cggE*cacR*atgI:1*gacK*accR:1*ccgV*ccaA*ccgG*cacT*gggT*gtgL*aagT:1*tatN:6*ctcT*aatV:2*cagL*gccT*gagD:2*gacA*aaaR*agtD*atcR:1*aagS*gtcI*accE*gcgL*atcA*acgI*agcA*atgV*gtgM*atcL*gcaL*gcaV*atgI:1*ctaM:4*tccN*gtaP*attV:1*gcgM*gttL:1*gtcP:1*atcV*atgT*gtcI:1*atcA*gacS:1*ggcM*gcaT*atcA*cgcQ*ggaA*ttcL*atcV:1*ttgG*ctcV*gccS*gacL*cacV*aacG*attG*ttcL*agcA*cttV:1*acaN*tttQ:1*accI*aacV:2*gttS*ctcA:1*gcgI*attA*gcgG:1*agcG:4*ataV:1*atgL*ctcI*ggcS:4*tcgY*cgcV*tacR*gccL:2*gatH*cggP:1*acgR:1*ttcV*tacQ*acgR*atgA*tttM*cacM*gggS*accV*gccG*cacK:2*ttgA*ggtA:1*ggtA*ttgA:1*attV*gccG*ggcI*gccT*atgF*tatL*tgcG*ctcM*agcR:2*cggK:1*ccgG*tatV:1*gaaS:1*ctcV:1*gcgP*cccA*attL:3*atgI*ctgA:1*gcgS*gtcF:3*ctcV:2*ggcL:2*gtaI:1*accV*gtgL*ggcA:1*ttcP*ttcR*aagG*ctgW*ttcV*gatA:1*aagR*cggG*cggE*atgR*aacM*actA*cggT*cggF:3*gtgA:2*gcaR:3*tggR:1*gggK*ccgA*gtgY:1*gcgG:1*acaS*tgcL-ttggtcgcctcc:3*ctgV:2*cccA:1*tacC*cggA*acaS+LAHF*acgN:2*ctgD:2*ttcQ*atgL:1*gccP:1*atgD:2*aatS:2*gatY:2*gctM*ggtE*cgaH*cgcH:2*cggV*gctN*cggQ*ctgT*aacI:2*gtgY:1*ttgI:1*gagH*actS*gacA:2*atgL:1*aatT:1*gtgR*gacG*atgL*ctgA*gtgD:1*gacE*aagQ*gtaL:1*aaaQ*aatR*atcV*tacS*cacQ*agtI:2*attV*gaaA*caaM:1*aaaR*gcgG*ataV:3*ttgN:1*acaE:1*atcL*aagE*cacQ*actA*tcgR*ataA*ccgT*ttcY*atcQ*atcA*agcG*atgQ*cagV:1+NR*gtgL*aatG*agtG*agcA*gagS*caaR:1+IDERTGDLNRLASGA*gaaN*ttcL*atgL*aagA:1*cgaN*attL*gatG:1*ataV*ctgR*gtgG:1+VSRA:2*gcgG*atgV*aatR*accS*tccL*atcV*gagD*acgA*atgL*catA*cgcY*atgI*tatQ*gcaN*ctcQ*atgF:1+GNKTF*gagN*gtcE:3*accA*gtcA*gacR*atgL*gatV*catS*ctcN*acgI:1*gatA*atgL*tcgG:1*ataA*acgL*gctQ*acgV*ctaN*agaF:1*catG*ctcI:1*gatN*ttcS*gagF:1*ttcW*ttcL*cggD*cctS*attV*cgcV*agcA*tacA*ttcL*tacD*tggT*gaaS*aaaP*catV:1*ttcD*gacS*gttN:1*ctcM:1*tggG*tcgN*ataA:1*tcgV*ataQ:1+HKLQTARDN*gatG*atgT*tttL:1*agtK:1*gacV*cagG:1*agcA*gaaR*aagQ:1*gagQ*tacS+TRSPQTVSAVVND:1*gtcG*aagR*gatS*atgL*gatN*attS*ctgV*attV*acaR*ctgS:1*ccgK*cagS*atgL*cgcG*gcgL*cagD*atgN:1*ccgD+AARAR*atgL:2*gcgM*atgQ*acgN*acgG*atgA*cggN:1*atgL*atgA*cttS*atcA*tggG*catR*ggcQ*acgV*cttA+D:1*gcgV*ttcQ*tatM*aagL*caaV*cagD*gagQ*aggT*aatK:1*aagM*gacG*cccI:1+LNQASAFLM:3*cggN-gttttt:2*gccS:1*atcP*gatS+M*gatA*tcgG:1*tatN*ctgV:1*cagP*tcgQ*gctV*tttL*gagK*aatS*ccgE*gatE:2*cggK*gggV*ctgA*aagQ*atgA:1*ttgI:4*aagH*gcaT*gccV:1*tttY*gtcF:1*gctQ*ctgT*gagD*ggaL*gatN:1*gcaF*acgS*cccT*gagA*ggcA*atcM*tctD*cggQ:1*gagN*ccgT:1*aagI*cggD*gagT:1*agaK*gagG:1*ataQ*aagP*ggaN:1*ccaS:1*cagA*ggcD:1*gcgS:1*tatS*ctgM*ggtS:1*accY*gcgP*gcgV*acgM*ttcL*aagR:3*gagD*ggcY*gccY*agaE*tacR:1*ctgM*ctgR*atcL*gccI*ggaV*gtgA*gcgV*gcgT*ataV*agcV*ttgV*attV*ttgI*atcL:1*atgL:1*atcA*atcL*accL:1*agtA*gtgI:2*gcaP*gtgL*gttY*atcL:2*accS:2*cttI:1*atgY*ggcM*gccS*tctA*ttcI:2*tccG:1*ttgV:1*tggF:1*gacV*attF:2*atcQ:2*tacH:1*atgS:1*ttgP*gcgG*atgL*tcgA*gtgF*atcV*ctgV:1*ctgV:3*tccA:3*ctgM:2*attA:3*aaaR*gagD:1*attS*gggA*gccL:1*ttgV*aacR*accS*ggaS*attV:2*gccT*atgV*gctR*ggtC:4*gtgI:4*atgL*gtgI:2*gttA*accS:2*ttgG*tttL*gtgL:2*gatS*ttgI*cgaG*attT*attV*ggtV:1*atcG:1*accF*accI:2*ctgV:1*ttgI:1*ttcI:2*ctcF:3*tcgT*ttcI*atgT*acaV:1*tccA*attM:1*gcgT:4*tggA*ttcS:3 +NC_000962.3 miniprot mRNA 597274 599985 1040 + . ID=MP000316;Rank=1;Identity=0.2980;Positive=0.4882;Target=sp|P9WJU1|MMPLA_MYCTU 1 967 +NC_000962.3 miniprot CDS 597274 599985 1040 + 0 Parent=MP000316;Rank=1;Identity=0.2980;Target=sp|P9WJU1|MMPLA_MYCTU 1 967 +##PAF sp|P9WKK7|ACEA_MYCTU 428 0 428 + NC_000962.3 699930 557526 558810 1284 1284 0 AS:i:2223 ms:i:2223 np:i:428 da:i:0 do:i:0 cg:Z:428M cs:Z::428 +NC_000962.3 miniprot mRNA 557527 558813 2223 + . ID=MP000317;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKK7|ACEA_MYCTU 1 428 +NC_000962.3 miniprot CDS 557527 558810 2223 + 0 Parent=MP000317;Rank=1;Identity=1.0000;Target=sp|P9WKK7|ACEA_MYCTU 1 428 +NC_000962.3 miniprot stop_codon 558811 558813 0 + 0 Parent=MP000317;Rank=1 +##PAF sp|P9WM69|Y093_MYCTU 282 0 282 - NC_000962.3 699930 102817 103663 843 846 0 AS:i:1465 ms:i:1465 np:i:282 da:i:-1 do:i:0 cg:Z:282M cs:Z:*gtgM:281 +NC_000962.3 miniprot mRNA 102815 103663 1465 - . ID=MP000318;Rank=1;Identity=0.9965;Positive=1.0000;Target=sp|P9WM69|Y093_MYCTU 1 282 +NC_000962.3 miniprot CDS 102818 103663 1465 - 0 Parent=MP000318;Rank=1;Identity=0.9965;Target=sp|P9WM69|Y093_MYCTU 1 282 +NC_000962.3 miniprot stop_codon 102815 102817 0 - 0 Parent=MP000318;Rank=1 +##PAF sp|P9WME1|Y196_MYCTU 194 0 194 + NC_000962.3 699930 231646 232228 582 582 0 AS:i:975 ms:i:975 np:i:194 da:i:0 do:i:0 cg:Z:194M cs:Z::194 +NC_000962.3 miniprot mRNA 231647 232231 975 + . ID=MP000319;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WME1|Y196_MYCTU 1 194 +NC_000962.3 miniprot CDS 231647 232228 975 + 0 Parent=MP000319;Rank=1;Identity=1.0000;Target=sp|P9WME1|Y196_MYCTU 1 194 +NC_000962.3 miniprot stop_codon 232229 232231 0 + 0 Parent=MP000319;Rank=1 +##PAF sp|P9WNG3|FABH_MYCTU 335 0 335 - NC_000962.3 699930 624475 625480 1005 1005 0 AS:i:1710 ms:i:1710 np:i:335 da:i:0 do:i:0 cg:Z:335M cs:Z::335 +NC_000962.3 miniprot mRNA 624473 625480 1710 - . ID=MP000320;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WNG3|FABH_MYCTU 1 335 +NC_000962.3 miniprot CDS 624476 625480 1710 - 0 Parent=MP000320;Rank=1;Identity=1.0000;Target=sp|P9WNG3|FABH_MYCTU 1 335 +NC_000962.3 miniprot stop_codon 624473 624475 0 - 0 Parent=MP000320;Rank=1 +##PAF sp|P9WPU1|CTPA_MYCTU 761 0 761 + NC_000962.3 699930 100582 102865 2283 2283 0 AS:i:3786 ms:i:3786 np:i:761 da:i:0 do:i:0 cg:Z:761M cs:Z::761 +NC_000962.3 miniprot mRNA 100583 102868 3786 + . ID=MP000321;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPU1|CTPA_MYCTU 1 761 +NC_000962.3 miniprot CDS 100583 102865 3786 + 0 Parent=MP000321;Rank=1;Identity=1.0000;Target=sp|P9WPU1|CTPA_MYCTU 1 761 +NC_000962.3 miniprot stop_codon 102866 102868 0 + 0 Parent=MP000321;Rank=1 +##PAF tr|Q6MX04|Q6MX04_MYCTU 590 0 590 - NC_000962.3 699930 371954 434679 1023 1839 0 AS:i:1494 ms:i:1664 np:i:423 da:i:0 do:i:5802 cg:Z:169M4I4M6D10M8D44M927N5M1D10M1D10M1D84M2631V6M5D58M56331V80M1D2M1018V101M cs:Z::1*agcN*ttcY*gcgS:8*gcgL:1*ctgM*tacF*gtgT:3*ttgS:4*gacA:1*gcgS*gccV:3*ggaR:2*gacA:2*ggtA*tcgV:2*gccS:2*tcgG*gcgS:2*gcgS:4*tccQ:2*ctgQ:3*tcgA*acgA:2*acgA*ggaA:5*ctgA:3*agcA:4*cagR:1*cagA*cagG:1*gccS*accA:1*accA*cggK*ctgA*gcgV:1*gccS:5*ctgR:6*gcgM*atcL*atcV*tcgA:3*gcaN*ctgA:2*tcgQ:2*gtcL:3*ctgF:9*accA:2*gccM:6*cagA:5*tttV:3*gccG:5*gtcA*tcgA*gcgQ:1*acaS*ccgS*ttcW*ggcS+IGLQ:4-accgtggcgggcggcggt:1*ctgA*gtcP:2*gccL:2*cagA*gtgI-accacgcgggtcttccgcaacctg:2*gcgG:1*gtcI:1*gagV:2*gtcL:1*aacG:2*gtcT:1*aacD*ttcY:4*gccG:1*atcS:2*ggcA:1*atcV:4*atcS:1*agcN*tccA:1*atcV:1*tttS:2~gt927ac*atcD:1*aatA*tacT:1-att:5*gtcI:1*gacN*ttcT:1-atc:5*ctcV:1*agcN*caaV:1-atc:5*gtcR:1*agcF*ttcG:1*atcL:1*agtN:2*atcF:1*gtaS*ttcG:1*gtcL:3*agcN*ctgT:1*aacS*tacT:1*atcF:1*tccG:4*atcS*tacF:1*atcL:1*tttS:2*gtcI:1*gacS*tacS:1*gtcI:4*gcgN:2*ttcN:1*caaL:1*tttL*gccG:1*accN:7*gccG*aacL:2*aacD:1*aacL*atcV:3*ctA~gt2628ag-c*tacL:1*ttcS:1*ttcI:1-aacgccggcgacttc:4*gccG:1*accS:7*gccF:1*accS:4*atcV:1*atcF*ggcF*ctgN:2*gacN:1*cagN*cagF:2*aatG*tttN:2*ggcD*tggI:1*tccT:1*agcF:2*agcA:1*ctgD*ttcT:1*tctT:1*accF*aacG:1*atcA:1*ttF~gt56328ag-c*ggaF:1*ttcM:6*accN*ggaE*aacD*tggM:1*atcV:2*tcgG:1*gccS*ggaF:1*ttcV:1*atcV:4*agcN*accQ*aacS*acgV:1*ttgF*ttcG:1*tccA:1*gacT:2*acgV:1*agcF*ttgA:1*ccgA:2*tatI:3*agcF*gtcA:1*accS:2*gtcI:5*aatD*gcaS:1*aacD*tacR:3*tacF*ttcG*aacS*accS*ggcV:1-tta:1*cacS*cgV~gc1015ag-c*aacS*aatS*gtcS:6*agcM:1*aatS*gtcS:1*atcF*gggF*ctcN:3*ggaV*cagS*atcA:1*ttcY:1*agcN*ttcN*aacG*tcgD*ggcV*agcQ*ggaS*aacG:1*ggcN*ctgN*ttcT:3*agcG*aacF:1*atcV:2*ttcY:3*agcA:1*aacT*ttcV:6*agcL*ttcQ*aacT:3*ggaA:1*accS:1*aacT*accL:3*ctaV*ttcA:1*tccT:2*gtcH*aacS*acgS:1*gccG:2*ccgQ:2*ttcD*aacQ*accS:1*agcF:1*aacG*accQ*ggcP +NC_000962.3 miniprot mRNA 371955 434679 1664 - . ID=MP000322;Rank=1;Identity=0.5563;Positive=0.6900;Target=tr|Q6MX04|Q6MX04_MYCTU 1 590 +NC_000962.3 miniprot CDS 433957 434679 707 - 0 Parent=MP000322;Rank=1;Identity=0.5959;Target=tr|Q6MX04|Q6MX04_MYCTU 1 231 +NC_000962.3 miniprot CDS 432692 433029 319 - 0 Parent=MP000322;Rank=1;Identity=0.5841;Acceptor=AC;Target=tr|Q6MX04|Q6MX04_MYCTU 232 340 +NC_000962.3 miniprot CDS 429854 430063 181 - 1 Parent=MP000322;Rank=1;Identity=0.5429;Target=tr|Q6MX04|Q6MX04_MYCTU 341 405 +NC_000962.3 miniprot CDS 373274 373525 219 - 1 Parent=MP000322;Rank=1;Identity=0.5119;Donor=GC;Target=tr|Q6MX04|Q6MX04_MYCTU 406 488 +NC_000962.3 miniprot CDS 371955 372258 238 - 1 Parent=MP000322;Rank=1;Identity=0.4752;Target=tr|Q6MX04|Q6MX04_MYCTU 489 590 +##PAF tr|Q6MX17|Q6MX17_MYCTU 104 0 102 + NC_000962.3 699930 349623 349929 249 306 0 AS:i:394 ms:i:394 np:i:86 da:i:0 do:i:0 cg:Z:102M cs:Z::29*agcG:3*gtgA:5*ccgA:9*accS:1*gccV:4*cagL:1*gtcS:3*gtcA*gtcI*accA*gccG:8*gccS:2*ggtA:5*gccI*agcG:1*ctgA:4*gccV:5*gggL:1*gtgS:2 +NC_000962.3 miniprot mRNA 349624 349929 394 + . ID=MP000323;Rank=1;Identity=0.8137;Positive=0.8431;Target=tr|Q6MX17|Q6MX17_MYCTU 1 102 +NC_000962.3 miniprot CDS 349624 349929 394 + 0 Parent=MP000323;Rank=1;Identity=0.8137;Target=tr|Q6MX17|Q6MX17_MYCTU 1 102 +##PAF tr|Q7ARS9|Q7ARS9_MYCTU 390 0 390 + NC_000962.3 699930 462134 463304 1167 1170 0 AS:i:2088 ms:i:2088 np:i:390 da:i:105 do:i:0 cg:Z:390M cs:Z:*gtgM:389 +NC_000962.3 miniprot mRNA 462135 463307 2088 + . ID=MP000324;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|Q7ARS9|Q7ARS9_MYCTU 1 390 +NC_000962.3 miniprot CDS 462135 463304 2088 + 0 Parent=MP000324;Rank=1;Identity=0.9974;Target=tr|Q7ARS9|Q7ARS9_MYCTU 1 390 +NC_000962.3 miniprot stop_codon 463305 463307 0 + 0 Parent=MP000324;Rank=1 +##PAF tr|V5QPR5|V5QPR5_MYCTU 53 0 53 - NC_000962.3 699930 622123 622282 156 159 0 AS:i:272 ms:i:272 np:i:53 da:i:-1 do:i:0 cg:Z:53M cs:Z:*gtgM:52 +NC_000962.3 miniprot mRNA 622121 622282 272 - . ID=MP000325;Rank=1;Identity=0.9811;Positive=1.0000;Target=tr|V5QPR5|V5QPR5_MYCTU 1 53 +NC_000962.3 miniprot CDS 622124 622282 272 - 0 Parent=MP000325;Rank=1;Identity=0.9811;Target=tr|V5QPR5|V5QPR5_MYCTU 1 53 +NC_000962.3 miniprot stop_codon 622121 622123 0 - 0 Parent=MP000325;Rank=1
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.gtf Thu Apr 06 09:20:48 2023 +0000 @@ -0,0 +1,1522 @@ +NC_000962.3 miniprot gene 326272 327381 512 - . gene_id "MPG000001"; +NC_000962.3 miniprot transcript 326272 327381 512 - . transcript_id "MPT000001"; gene_id "MPG000001"; +NC_000962.3 miniprot exon 326272 327381 512 - . transcript_id "MPT000001"; gene_id "MPG000001"; +NC_000962.3 miniprot CDS 326272 327381 512 - 0 transcript_id "MPT000001"; gene_id "MPG000001"; +NC_000962.3 miniprot gene 81685 82323 300 + . gene_id "MPG000002"; +NC_000962.3 miniprot transcript 81685 82323 300 + . transcript_id "MPT000002"; gene_id "MPG000002"; +NC_000962.3 miniprot exon 81685 82323 300 + . transcript_id "MPT000002"; gene_id "MPG000002"; +NC_000962.3 miniprot CDS 81685 82323 300 + 0 transcript_id "MPT000002"; gene_id "MPG000002"; +NC_000962.3 miniprot gene 423639 424019 620 + . gene_id "MPG000003"; +NC_000962.3 miniprot transcript 423639 424019 620 + . transcript_id "MPT000003"; gene_id "MPG000003"; +NC_000962.3 miniprot exon 423639 424019 620 + . transcript_id "MPT000003"; gene_id "MPG000003"; +NC_000962.3 miniprot CDS 423639 424016 620 + 0 transcript_id "MPT000003"; gene_id "MPG000003"; +NC_000962.3 miniprot gene 616223 616831 1071 + . gene_id "MPG000004"; +NC_000962.3 miniprot transcript 616223 616831 1071 + . transcript_id "MPT000004"; gene_id "MPG000004"; +NC_000962.3 miniprot exon 616223 616831 1071 + . transcript_id "MPT000004"; gene_id "MPG000004"; +NC_000962.3 miniprot CDS 616223 616828 1071 + 0 transcript_id "MPT000004"; gene_id "MPG000004"; +NC_000962.3 miniprot gene 618305 619894 2736 + . gene_id "MPG000005"; +NC_000962.3 miniprot transcript 618305 619894 2736 + . transcript_id "MPT000005"; gene_id "MPG000005"; +NC_000962.3 miniprot exon 618305 619894 2736 + . transcript_id "MPT000005"; gene_id "MPG000005"; +NC_000962.3 miniprot CDS 618305 619891 2736 + 0 transcript_id "MPT000005"; gene_id "MPG000005"; +NC_000962.3 miniprot gene 133020 133769 1267 + . gene_id "MPG000006"; +NC_000962.3 miniprot transcript 133020 133769 1267 + . transcript_id "MPT000006"; gene_id "MPG000006"; +NC_000962.3 miniprot exon 133020 133769 1267 + . transcript_id "MPT000006"; gene_id "MPG000006"; +NC_000962.3 miniprot CDS 133020 133766 1267 + 0 transcript_id "MPT000006"; gene_id "MPG000006"; +NC_000962.3 miniprot gene 237206 237895 1144 + . gene_id "MPG000007"; +NC_000962.3 miniprot transcript 237206 237895 1144 + . transcript_id "MPT000007"; gene_id "MPG000007"; +NC_000962.3 miniprot exon 237206 237895 1144 + . transcript_id "MPT000007"; gene_id "MPG000007"; +NC_000962.3 miniprot CDS 237206 237892 1144 + 0 transcript_id "MPT000007"; gene_id "MPG000007"; +NC_000962.3 miniprot gene 330422 331003 1032 + . gene_id "MPG000008"; +NC_000962.3 miniprot transcript 330422 331003 1032 + . transcript_id "MPT000008"; gene_id "MPG000008"; +NC_000962.3 miniprot exon 330422 331003 1032 + . transcript_id "MPT000008"; gene_id "MPG000008"; +NC_000962.3 miniprot CDS 330422 331000 1032 + 0 transcript_id "MPT000008"; gene_id "MPG000008"; +NC_000962.3 miniprot gene 486052 488622 1366 + . gene_id "MPG000009"; +NC_000962.3 miniprot transcript 486052 488622 1366 + . transcript_id "MPT000009"; gene_id "MPG000009"; +NC_000962.3 miniprot exon 486052 488622 1366 + . transcript_id "MPT000009"; gene_id "MPG000009"; +NC_000962.3 miniprot CDS 486052 488622 1366 + 0 transcript_id "MPT000009"; gene_id "MPG000009"; +NC_000962.3 miniprot gene 656841 657443 209 - . gene_id "MPG000010"; +NC_000962.3 miniprot transcript 656841 657443 209 - . transcript_id "MPT000010"; gene_id "MPG000010"; +NC_000962.3 miniprot exon 657208 657443 147 - . transcript_id "MPT000010"; gene_id "MPG000010"; +NC_000962.3 miniprot CDS 657208 657443 147 - 0 transcript_id "MPT000010"; gene_id "MPG000010"; +NC_000962.3 miniprot exon 656841 656998 62 - . transcript_id "MPT000010"; gene_id "MPG000010"; +NC_000962.3 miniprot CDS 656841 656998 62 - 1 transcript_id "MPT000010"; gene_id "MPG000010"; +NC_000962.3 miniprot gene 547344 547517 298 - . gene_id "MPG000011"; +NC_000962.3 miniprot transcript 547344 547517 298 - . transcript_id "MPT000011"; gene_id "MPG000011"; +NC_000962.3 miniprot exon 547344 547517 298 - . transcript_id "MPT000011"; gene_id "MPG000011"; +NC_000962.3 miniprot CDS 547347 547517 298 - 0 transcript_id "MPT000011"; gene_id "MPG000011"; +NC_000962.3 miniprot gene 48377 49003 337 - . gene_id "MPG000012"; +NC_000962.3 miniprot transcript 48377 49003 337 - . transcript_id "MPT000012"; gene_id "MPG000012"; +NC_000962.3 miniprot exon 48377 49003 337 - . transcript_id "MPT000012"; gene_id "MPG000012"; +NC_000962.3 miniprot CDS 48377 49003 337 - 0 transcript_id "MPT000012"; gene_id "MPG000012"; +NC_000962.3 miniprot gene 474940 475344 731 + . gene_id "MPG000013"; +NC_000962.3 miniprot transcript 474940 475344 731 + . transcript_id "MPT000013"; gene_id "MPG000013"; +NC_000962.3 miniprot exon 474940 475344 731 + . transcript_id "MPT000013"; gene_id "MPG000013"; +NC_000962.3 miniprot CDS 474940 475341 731 + 0 transcript_id "MPT000013"; gene_id "MPG000013"; +NC_000962.3 miniprot gene 507132 507761 1084 - . gene_id "MPG000014"; +NC_000962.3 miniprot transcript 507132 507761 1084 - . transcript_id "MPT000014"; gene_id "MPG000014"; +NC_000962.3 miniprot exon 507132 507761 1084 - . transcript_id "MPT000014"; gene_id "MPG000014"; +NC_000962.3 miniprot CDS 507135 507761 1084 - 0 transcript_id "MPT000014"; gene_id "MPG000014"; +NC_000962.3 miniprot gene 487372 596021 1536 + . gene_id "MPG000015"; +NC_000962.3 miniprot transcript 487372 596021 1536 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 487372 488796 1317 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 487372 488796 1317 + 0 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 498429 498650 26 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 498429 498650 26 + 0 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 510341 510807 41 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 510341 510807 41 + 0 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 530380 530533 40 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 530380 530533 40 + 1 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 555993 556323 10 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 555993 556323 10 + 0 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 562305 562444 57 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 562305 562444 57 + 2 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot exon 595659 596021 45 + . transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot CDS 595659 596021 45 + 0 transcript_id "MPT000015"; gene_id "MPG000015"; +NC_000962.3 miniprot gene 364044 364469 719 + . gene_id "MPG000016"; +NC_000962.3 miniprot transcript 364044 364469 719 + . transcript_id "MPT000016"; gene_id "MPG000016"; +NC_000962.3 miniprot exon 364044 364469 719 + . transcript_id "MPT000016"; gene_id "MPG000016"; +NC_000962.3 miniprot CDS 364044 364466 719 + 0 transcript_id "MPT000016"; gene_id "MPG000016"; +NC_000962.3 miniprot gene 76237 77622 2354 - . gene_id "MPG000017"; +NC_000962.3 miniprot transcript 76237 77622 2354 - . transcript_id "MPT000017"; gene_id "MPG000017"; +NC_000962.3 miniprot exon 76237 77622 2354 - . transcript_id "MPT000017"; gene_id "MPG000017"; +NC_000962.3 miniprot CDS 76240 77622 2354 - 0 transcript_id "MPT000017"; gene_id "MPG000017"; +NC_000962.3 miniprot gene 653879 654739 1439 + . gene_id "MPG000018"; +NC_000962.3 miniprot transcript 653879 654739 1439 + . transcript_id "MPT000018"; gene_id "MPG000018"; +NC_000962.3 miniprot exon 653879 654739 1439 + . transcript_id "MPT000018"; gene_id "MPG000018"; +NC_000962.3 miniprot CDS 653879 654736 1439 + 0 transcript_id "MPT000018"; gene_id "MPG000018"; +NC_000962.3 miniprot gene 333502 336310 1542 - . gene_id "MPG000019"; +NC_000962.3 miniprot transcript 333502 336310 1542 - . transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot exon 335359 336310 1018 - . transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot CDS 335359 336310 1018 - 0 transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot exon 334338 334452 109 - . transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot CDS 334338 334452 109 - 2 transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot exon 333502 333962 415 - . transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot CDS 333505 333962 415 - 1 transcript_id "MPT000019"; gene_id "MPG000019"; +NC_000962.3 miniprot gene 517803 518396 1042 - . gene_id "MPG000020"; +NC_000962.3 miniprot transcript 517803 518396 1042 - . transcript_id "MPT000020"; gene_id "MPG000020"; +NC_000962.3 miniprot exon 517803 518396 1042 - . transcript_id "MPT000020"; gene_id "MPG000020"; +NC_000962.3 miniprot CDS 517806 518396 1042 - 0 transcript_id "MPT000020"; gene_id "MPG000020"; +NC_000962.3 miniprot gene 222289 223530 2066 + . gene_id "MPG000021"; +NC_000962.3 miniprot transcript 222289 223530 2066 + . transcript_id "MPT000021"; gene_id "MPG000021"; +NC_000962.3 miniprot exon 222289 223530 2066 + . transcript_id "MPT000021"; gene_id "MPG000021"; +NC_000962.3 miniprot CDS 222289 223527 2066 + 0 transcript_id "MPT000021"; gene_id "MPG000021"; +NC_000962.3 miniprot gene 50021 51124 1878 - . gene_id "MPG000022"; +NC_000962.3 miniprot transcript 50021 51124 1878 - . transcript_id "MPT000022"; gene_id "MPG000022"; +NC_000962.3 miniprot exon 50021 51124 1878 - . transcript_id "MPT000022"; gene_id "MPG000022"; +NC_000962.3 miniprot CDS 50024 51124 1878 - 0 transcript_id "MPT000022"; gene_id "MPG000022"; +NC_000962.3 miniprot gene 361334 363109 3134 + . gene_id "MPG000023"; +NC_000962.3 miniprot transcript 361334 363109 3134 + . transcript_id "MPT000023"; gene_id "MPG000023"; +NC_000962.3 miniprot exon 361334 363109 3134 + . transcript_id "MPT000023"; gene_id "MPG000023"; +NC_000962.3 miniprot CDS 361334 363106 3134 + 0 transcript_id "MPT000023"; gene_id "MPG000023"; +NC_000962.3 miniprot gene 307895 309547 730 - . gene_id "MPG000024"; +NC_000962.3 miniprot transcript 307895 309547 730 - . transcript_id "MPT000024"; gene_id "MPG000024"; +NC_000962.3 miniprot exon 308827 309547 568 - . transcript_id "MPT000024"; gene_id "MPG000024"; +NC_000962.3 miniprot CDS 308827 309547 568 - 0 transcript_id "MPT000024"; gene_id "MPG000024"; +NC_000962.3 miniprot exon 307895 308547 162 - . transcript_id "MPT000024"; gene_id "MPG000024"; +NC_000962.3 miniprot CDS 307895 308547 162 - 2 transcript_id "MPT000024"; gene_id "MPG000024"; +NC_000962.3 miniprot gene 349935 351410 750 + . gene_id "MPG000025"; +NC_000962.3 miniprot transcript 349935 351410 750 + . transcript_id "MPT000025"; gene_id "MPG000025"; +NC_000962.3 miniprot exon 349935 351410 750 + . transcript_id "MPT000025"; gene_id "MPG000025"; +NC_000962.3 miniprot CDS 349935 351410 750 + 0 transcript_id "MPT000025"; gene_id "MPG000025"; +NC_000962.3 miniprot gene 339358 351410 727 + . gene_id "MPG000026"; +NC_000962.3 miniprot transcript 339358 351410 727 + . transcript_id "MPT000026"; gene_id "MPG000026"; +NC_000962.3 miniprot exon 339358 339994 542 + . transcript_id "MPT000026"; gene_id "MPG000026"; +NC_000962.3 miniprot CDS 339358 339994 542 + 0 transcript_id "MPT000026"; gene_id "MPG000026"; +NC_000962.3 miniprot exon 350530 351410 185 + . transcript_id "MPT000026"; gene_id "MPG000026"; +NC_000962.3 miniprot CDS 350530 351410 185 + 2 transcript_id "MPT000026"; gene_id "MPG000026"; +NC_000962.3 miniprot gene 466873 468001 606 - . gene_id "MPG000027"; +NC_000962.3 miniprot transcript 466873 468001 606 - . transcript_id "MPT000027"; gene_id "MPG000027"; +NC_000962.3 miniprot exon 466873 468001 606 - . transcript_id "MPT000027"; gene_id "MPG000027"; +NC_000962.3 miniprot CDS 466873 468001 606 - 0 transcript_id "MPT000027"; gene_id "MPG000027"; +NC_000962.3 miniprot gene 288778 336310 827 - . gene_id "MPG000028"; +NC_000962.3 miniprot transcript 288778 336310 827 - . transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot exon 335751 336310 493 - . transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot CDS 335751 336310 493 - 0 transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot exon 334990 335489 268 - . transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot CDS 334990 335489 268 - 1 transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot exon 288778 289136 66 - . transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot CDS 288778 289136 66 - 2 transcript_id "MPT000028"; gene_id "MPG000028"; +NC_000962.3 miniprot gene 674620 675916 853 - . gene_id "MPG000029"; +NC_000962.3 miniprot transcript 674620 675916 853 - . transcript_id "MPT000029"; gene_id "MPG000029"; +NC_000962.3 miniprot exon 674620 675916 853 - . transcript_id "MPT000029"; gene_id "MPG000029"; +NC_000962.3 miniprot CDS 674620 675916 853 - 0 transcript_id "MPT000029"; gene_id "MPG000029"; +NC_000962.3 miniprot gene 149533 151576 822 + . gene_id "MPG000030"; +NC_000962.3 miniprot transcript 149533 151576 822 + . transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot exon 149533 150083 520 + . transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot CDS 149533 150083 520 + 0 transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot exon 150237 150754 268 + . transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot CDS 150237 150754 268 + 1 transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot exon 151241 151576 34 + . transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot CDS 151241 151576 34 + 2 transcript_id "MPT000030"; gene_id "MPG000030"; +NC_000962.3 miniprot gene 204098 205129 480 + . gene_id "MPG000031"; +NC_000962.3 miniprot transcript 204098 205129 480 + . transcript_id "MPT000031"; gene_id "MPG000031"; +NC_000962.3 miniprot exon 204098 205129 480 + . transcript_id "MPT000031"; gene_id "MPG000031"; +NC_000962.3 miniprot CDS 204098 205129 480 + 0 transcript_id "MPT000031"; gene_id "MPG000031"; +NC_000962.3 miniprot gene 57410 57973 955 + . gene_id "MPG000032"; +NC_000962.3 miniprot transcript 57410 57973 955 + . transcript_id "MPT000032"; gene_id "MPG000032"; +NC_000962.3 miniprot exon 57410 57973 955 + . transcript_id "MPT000032"; gene_id "MPG000032"; +NC_000962.3 miniprot CDS 57410 57970 955 + 0 transcript_id "MPT000032"; gene_id "MPG000032"; +NC_000962.3 miniprot gene 191984 193135 1964 - . gene_id "MPG000033"; +NC_000962.3 miniprot transcript 191984 193135 1964 - . transcript_id "MPT000033"; gene_id "MPG000033"; +NC_000962.3 miniprot exon 191984 193135 1964 - . transcript_id "MPT000033"; gene_id "MPG000033"; +NC_000962.3 miniprot CDS 191987 193135 1964 - 0 transcript_id "MPT000033"; gene_id "MPG000033"; +NC_000962.3 miniprot gene 612598 612903 522 + . gene_id "MPG000034"; +NC_000962.3 miniprot transcript 612598 612903 522 + . transcript_id "MPT000034"; gene_id "MPG000034"; +NC_000962.3 miniprot exon 612598 612903 522 + . transcript_id "MPT000034"; gene_id "MPG000034"; +NC_000962.3 miniprot CDS 612598 612900 522 + 0 transcript_id "MPT000034"; gene_id "MPG000034"; +NC_000962.3 miniprot gene 144049 145626 2669 + . gene_id "MPG000035"; +NC_000962.3 miniprot transcript 144049 145626 2669 + . transcript_id "MPT000035"; gene_id "MPG000035"; +NC_000962.3 miniprot exon 144049 145626 2669 + . transcript_id "MPT000035"; gene_id "MPG000035"; +NC_000962.3 miniprot CDS 144049 145623 2669 + 0 transcript_id "MPT000035"; gene_id "MPG000035"; +NC_000962.3 miniprot gene 194993 196657 2831 + . gene_id "MPG000036"; +NC_000962.3 miniprot transcript 194993 196657 2831 + . transcript_id "MPT000036"; gene_id "MPG000036"; +NC_000962.3 miniprot exon 194993 196657 2831 + . transcript_id "MPT000036"; gene_id "MPG000036"; +NC_000962.3 miniprot CDS 194993 196654 2831 + 0 transcript_id "MPT000036"; gene_id "MPG000036"; +NC_000962.3 miniprot gene 699856 699930 117 + . gene_id "MPG000037"; +NC_000962.3 miniprot transcript 699856 699930 117 + . transcript_id "MPT000037"; gene_id "MPG000037"; +NC_000962.3 miniprot exon 699856 699930 117 + . transcript_id "MPT000037"; gene_id "MPG000037"; +NC_000962.3 miniprot CDS 699856 699930 117 + 0 transcript_id "MPT000037"; gene_id "MPG000037"; +NC_000962.3 miniprot gene 75301 76203 614 + . gene_id "MPG000038"; +NC_000962.3 miniprot transcript 75301 76203 614 + . transcript_id "MPT000038"; gene_id "MPG000038"; +NC_000962.3 miniprot exon 75301 76203 614 + . transcript_id "MPT000038"; gene_id "MPG000038"; +NC_000962.3 miniprot CDS 75301 76203 614 + 0 transcript_id "MPT000038"; gene_id "MPG000038"; +NC_000962.3 miniprot gene 186785 187429 1102 + . gene_id "MPG000039"; +NC_000962.3 miniprot transcript 186785 187429 1102 + . transcript_id "MPT000039"; gene_id "MPG000039"; +NC_000962.3 miniprot exon 186785 187429 1102 + . transcript_id "MPT000039"; gene_id "MPG000039"; +NC_000962.3 miniprot CDS 186785 187426 1102 + 0 transcript_id "MPT000039"; gene_id "MPG000039"; +NC_000962.3 miniprot gene 688044 689062 687 + . gene_id "MPG000040"; +NC_000962.3 miniprot transcript 688044 689062 687 + . transcript_id "MPT000040"; gene_id "MPG000040"; +NC_000962.3 miniprot exon 688044 689062 687 + . transcript_id "MPT000040"; gene_id "MPG000040"; +NC_000962.3 miniprot CDS 688044 689059 687 + 0 transcript_id "MPT000040"; gene_id "MPG000040"; +NC_000962.3 miniprot gene 323617 324525 706 - . gene_id "MPG000041"; +NC_000962.3 miniprot transcript 323617 324525 706 - . transcript_id "MPT000041"; gene_id "MPG000041"; +NC_000962.3 miniprot exon 323617 324525 706 - . transcript_id "MPT000041"; gene_id "MPG000041"; +NC_000962.3 miniprot CDS 323617 324525 706 - 0 transcript_id "MPT000041"; gene_id "MPG000041"; +NC_000962.3 miniprot gene 485731 489939 7166 + . gene_id "MPG000042"; +NC_000962.3 miniprot transcript 485731 489939 7166 + . transcript_id "MPT000042"; gene_id "MPG000042"; +NC_000962.3 miniprot exon 485731 489939 7166 + . transcript_id "MPT000042"; gene_id "MPG000042"; +NC_000962.3 miniprot CDS 485731 489936 7166 + 0 transcript_id "MPT000042"; gene_id "MPG000042"; +NC_000962.3 miniprot gene 25913 26881 1625 - . gene_id "MPG000043"; +NC_000962.3 miniprot transcript 25913 26881 1625 - . transcript_id "MPT000043"; gene_id "MPG000043"; +NC_000962.3 miniprot exon 25913 26881 1625 - . transcript_id "MPT000043"; gene_id "MPG000043"; +NC_000962.3 miniprot CDS 25916 26881 1625 - 0 transcript_id "MPT000043"; gene_id "MPG000043"; +NC_000962.3 miniprot gene 259923 260831 1569 - . gene_id "MPG000044"; +NC_000962.3 miniprot transcript 259923 260831 1569 - . transcript_id "MPT000044"; gene_id "MPG000044"; +NC_000962.3 miniprot exon 259923 260831 1569 - . transcript_id "MPT000044"; gene_id "MPG000044"; +NC_000962.3 miniprot CDS 259926 260831 1569 - 0 transcript_id "MPT000044"; gene_id "MPG000044"; +NC_000962.3 miniprot gene 543174 544730 2678 + . gene_id "MPG000045"; +NC_000962.3 miniprot transcript 543174 544730 2678 + . transcript_id "MPT000045"; gene_id "MPG000045"; +NC_000962.3 miniprot exon 543174 544730 2678 + . transcript_id "MPT000045"; gene_id "MPG000045"; +NC_000962.3 miniprot CDS 543174 544727 2678 + 0 transcript_id "MPT000045"; gene_id "MPG000045"; +NC_000962.3 miniprot gene 104434 105101 1037 - . gene_id "MPG000046"; +NC_000962.3 miniprot transcript 104434 105101 1037 - . transcript_id "MPT000046"; gene_id "MPG000046"; +NC_000962.3 miniprot exon 104434 105101 1037 - . transcript_id "MPT000046"; gene_id "MPG000046"; +NC_000962.3 miniprot CDS 104437 105101 1037 - 0 transcript_id "MPT000046"; gene_id "MPG000046"; +NC_000962.3 miniprot gene 286898 287071 281 - . gene_id "MPG000047"; +NC_000962.3 miniprot transcript 286898 287071 281 - . transcript_id "MPT000047"; gene_id "MPG000047"; +NC_000962.3 miniprot exon 286898 287071 281 - . transcript_id "MPT000047"; gene_id "MPG000047"; +NC_000962.3 miniprot CDS 286901 287071 281 - 0 transcript_id "MPT000047"; gene_id "MPG000047"; +NC_000962.3 miniprot gene 33224 33553 540 + . gene_id "MPG000048"; +NC_000962.3 miniprot transcript 33224 33553 540 + . transcript_id "MPT000048"; gene_id "MPG000048"; +NC_000962.3 miniprot exon 33224 33553 540 + . transcript_id "MPT000048"; gene_id "MPG000048"; +NC_000962.3 miniprot CDS 33224 33550 540 + 0 transcript_id "MPT000048"; gene_id "MPG000048"; +NC_000962.3 miniprot gene 29245 29607 571 + . gene_id "MPG000049"; +NC_000962.3 miniprot transcript 29245 29607 571 + . transcript_id "MPT000049"; gene_id "MPG000049"; +NC_000962.3 miniprot exon 29245 29607 571 + . transcript_id "MPT000049"; gene_id "MPG000049"; +NC_000962.3 miniprot CDS 29245 29604 571 + 0 transcript_id "MPT000049"; gene_id "MPG000049"; +NC_000962.3 miniprot gene 554882 556306 2442 - . gene_id "MPG000050"; +NC_000962.3 miniprot transcript 554882 556306 2442 - . transcript_id "MPT000050"; gene_id "MPG000050"; +NC_000962.3 miniprot exon 554882 556306 2442 - . transcript_id "MPT000050"; gene_id "MPG000050"; +NC_000962.3 miniprot CDS 554885 556306 2442 - 0 transcript_id "MPT000050"; gene_id "MPG000050"; +NC_000962.3 miniprot gene 345677 347758 874 + . gene_id "MPG000051"; +NC_000962.3 miniprot transcript 345677 347758 874 + . transcript_id "MPT000051"; gene_id "MPG000051"; +NC_000962.3 miniprot exon 345677 347758 874 + . transcript_id "MPT000051"; gene_id "MPG000051"; +NC_000962.3 miniprot CDS 345677 347758 874 + 0 transcript_id "MPT000051"; gene_id "MPG000051"; +NC_000962.3 miniprot gene 349935 350165 294 + . gene_id "MPG000052"; +NC_000962.3 miniprot transcript 349935 350165 294 + . transcript_id "MPT000052"; gene_id "MPG000052"; +NC_000962.3 miniprot exon 349935 350165 294 + . transcript_id "MPT000052"; gene_id "MPG000052"; +NC_000962.3 miniprot CDS 349935 350165 294 + 0 transcript_id "MPT000052"; gene_id "MPG000052"; +NC_000962.3 miniprot gene 367995 425388 940 - . gene_id "MPG000053"; +NC_000962.3 miniprot transcript 367995 425388 940 - . transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot exon 425186 425388 172 - . transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot CDS 425186 425388 172 - 0 transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot exon 374498 374941 468 - . transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot CDS 374498 374941 468 - 1 transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot exon 369386 369495 96 - . transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot CDS 369386 369495 96 - 1 transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot exon 367995 368287 204 - . transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot CDS 367995 368287 204 - 2 transcript_id "MPT000053"; gene_id "MPG000053"; +NC_000962.3 miniprot gene 367995 434049 937 - . gene_id "MPG000054"; +NC_000962.3 miniprot transcript 367995 434049 937 - . transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot exon 433532 434049 496 - . transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot CDS 433532 434049 496 - 0 transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot exon 429633 429898 237 - . transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot CDS 429633 429898 237 - 1 transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot exon 367995 368287 204 - . transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot CDS 367995 368287 204 - 2 transcript_id "MPT000054"; gene_id "MPG000054"; +NC_000962.3 miniprot gene 619891 620865 1674 + . gene_id "MPG000055"; +NC_000962.3 miniprot transcript 619891 620865 1674 + . transcript_id "MPT000055"; gene_id "MPG000055"; +NC_000962.3 miniprot exon 619891 620865 1674 + . transcript_id "MPT000055"; gene_id "MPG000055"; +NC_000962.3 miniprot CDS 619891 620862 1674 + 0 transcript_id "MPT000055"; gene_id "MPG000055"; +NC_000962.3 miniprot gene 397442 398227 1393 + . gene_id "MPG000056"; +NC_000962.3 miniprot transcript 397442 398227 1393 + . transcript_id "MPT000056"; gene_id "MPG000056"; +NC_000962.3 miniprot exon 397442 398227 1393 + . transcript_id "MPT000056"; gene_id "MPG000056"; +NC_000962.3 miniprot CDS 397442 398224 1393 + 0 transcript_id "MPT000056"; gene_id "MPG000056"; +NC_000962.3 miniprot gene 293798 295633 3117 - . gene_id "MPG000057"; +NC_000962.3 miniprot transcript 293798 295633 3117 - . transcript_id "MPT000057"; gene_id "MPG000057"; +NC_000962.3 miniprot exon 293798 295633 3117 - . transcript_id "MPT000057"; gene_id "MPG000057"; +NC_000962.3 miniprot CDS 293801 295633 3117 - 0 transcript_id "MPT000057"; gene_id "MPG000057"; +NC_000962.3 miniprot gene 447147 448043 1525 - . gene_id "MPG000058"; +NC_000962.3 miniprot transcript 447147 448043 1525 - . transcript_id "MPT000058"; gene_id "MPG000058"; +NC_000962.3 miniprot exon 447147 448043 1525 - . transcript_id "MPT000058"; gene_id "MPG000058"; +NC_000962.3 miniprot CDS 447150 448043 1525 - 0 transcript_id "MPT000058"; gene_id "MPG000058"; +NC_000962.3 miniprot gene 522347 524533 3579 - . gene_id "MPG000059"; +NC_000962.3 miniprot transcript 522347 524533 3579 - . transcript_id "MPT000059"; gene_id "MPG000059"; +NC_000962.3 miniprot exon 522347 524533 3579 - . transcript_id "MPT000059"; gene_id "MPG000059"; +NC_000962.3 miniprot CDS 522350 524533 3579 - 0 transcript_id "MPT000059"; gene_id "MPG000059"; +NC_000962.3 miniprot gene 256064 257677 2846 + . gene_id "MPG000060"; +NC_000962.3 miniprot transcript 256064 257677 2846 + . transcript_id "MPT000060"; gene_id "MPG000060"; +NC_000962.3 miniprot exon 256064 257677 2846 + . transcript_id "MPT000060"; gene_id "MPG000060"; +NC_000962.3 miniprot CDS 256064 257674 2846 + 0 transcript_id "MPT000060"; gene_id "MPG000060"; +NC_000962.3 miniprot gene 526143 527360 2043 - . gene_id "MPG000061"; +NC_000962.3 miniprot transcript 526143 527360 2043 - . transcript_id "MPT000061"; gene_id "MPG000061"; +NC_000962.3 miniprot exon 526143 527360 2043 - . transcript_id "MPT000061"; gene_id "MPG000061"; +NC_000962.3 miniprot CDS 526146 527360 2043 - 0 transcript_id "MPT000061"; gene_id "MPG000061"; +NC_000962.3 miniprot gene 566776 567222 784 + . gene_id "MPG000062"; +NC_000962.3 miniprot transcript 566776 567222 784 + . transcript_id "MPT000062"; gene_id "MPG000062"; +NC_000962.3 miniprot exon 566776 567222 784 + . transcript_id "MPT000062"; gene_id "MPG000062"; +NC_000962.3 miniprot CDS 566776 567219 784 + 0 transcript_id "MPT000062"; gene_id "MPG000062"; +NC_000962.3 miniprot gene 464029 466662 2287 + . gene_id "MPG000063"; +NC_000962.3 miniprot transcript 464029 466662 2287 + . transcript_id "MPT000063"; gene_id "MPG000063"; +NC_000962.3 miniprot exon 464029 466662 2287 + . transcript_id "MPT000063"; gene_id "MPG000063"; +NC_000962.3 miniprot CDS 464029 466662 2287 + 0 transcript_id "MPT000063"; gene_id "MPG000063"; +NC_000962.3 miniprot gene 125643 130541 8150 - . gene_id "MPG000064"; +NC_000962.3 miniprot transcript 125643 130541 8150 - . transcript_id "MPT000064"; gene_id "MPG000064"; +NC_000962.3 miniprot exon 125643 130541 8150 - . transcript_id "MPT000064"; gene_id "MPG000064"; +NC_000962.3 miniprot CDS 125646 130541 8150 - 0 transcript_id "MPT000064"; gene_id "MPG000064"; +NC_000962.3 miniprot gene 483977 485725 1245 + . gene_id "MPG000065"; +NC_000962.3 miniprot transcript 483977 485725 1245 + . transcript_id "MPT000065"; gene_id "MPG000065"; +NC_000962.3 miniprot exon 483977 485725 1245 + . transcript_id "MPT000065"; gene_id "MPG000065"; +NC_000962.3 miniprot CDS 483977 485725 1245 + 0 transcript_id "MPT000065"; gene_id "MPG000065"; +NC_000962.3 miniprot gene 479502 590277 1658 + . gene_id "MPG000066"; +NC_000962.3 miniprot transcript 479502 590277 1658 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 479502 479593 22 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 479502 479593 22 + 0 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 486042 488817 1487 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 486042 488817 1487 + 1 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 506950 507315 31 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 506950 507315 31 + 0 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 552686 552835 41 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 552686 552835 41 + 0 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 586552 586646 24 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 586552 586646 24 + 0 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot exon 590103 590277 53 + . transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot CDS 590103 590277 53 + 1 transcript_id "MPT000066"; gene_id "MPG000066"; +NC_000962.3 miniprot gene 478656 479690 360 - . gene_id "MPG000067"; +NC_000962.3 miniprot transcript 478656 479690 360 - . transcript_id "MPT000067"; gene_id "MPG000067"; +NC_000962.3 miniprot exon 478656 479690 360 - . transcript_id "MPT000067"; gene_id "MPG000067"; +NC_000962.3 miniprot CDS 478656 479690 360 - 0 transcript_id "MPT000067"; gene_id "MPG000067"; +NC_000962.3 miniprot gene 333680 338719 2476 - . gene_id "MPG000068"; +NC_000962.3 miniprot transcript 333680 338719 2476 - . transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot exon 338024 338719 458 - . transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot CDS 338024 338719 458 - 0 transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot exon 336674 337510 530 - . transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot CDS 336674 337510 530 - 0 transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot exon 334856 335950 839 - . transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot CDS 334856 335950 839 - 0 transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot exon 333680 334675 649 - . transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot CDS 333680 334675 649 - 0 transcript_id "MPT000068"; gene_id "MPG000068"; +NC_000962.3 miniprot gene 560848 561711 1076 - . gene_id "MPG000069"; +NC_000962.3 miniprot transcript 560848 561711 1076 - . transcript_id "MPT000069"; gene_id "MPG000069"; +NC_000962.3 miniprot exon 560848 561711 1076 - . transcript_id "MPT000069"; gene_id "MPG000069"; +NC_000962.3 miniprot CDS 560851 561711 1076 - 0 transcript_id "MPT000069"; gene_id "MPG000069"; +NC_000962.3 miniprot gene 627248 628288 1809 + . gene_id "MPG000070"; +NC_000962.3 miniprot transcript 627248 628288 1809 + . transcript_id "MPT000070"; gene_id "MPG000070"; +NC_000962.3 miniprot exon 627248 628288 1809 + . transcript_id "MPT000070"; gene_id "MPG000070"; +NC_000962.3 miniprot CDS 627248 628285 1809 + 0 transcript_id "MPT000070"; gene_id "MPG000070"; +NC_000962.3 miniprot gene 141200 142144 1576 + . gene_id "MPG000071"; +NC_000962.3 miniprot transcript 141200 142144 1576 + . transcript_id "MPT000071"; gene_id "MPG000071"; +NC_000962.3 miniprot exon 141200 142144 1576 + . transcript_id "MPT000071"; gene_id "MPG000071"; +NC_000962.3 miniprot CDS 141200 142141 1576 + 0 transcript_id "MPT000071"; gene_id "MPG000071"; +NC_000962.3 miniprot gene 389260 390591 2267 + . gene_id "MPG000072"; +NC_000962.3 miniprot transcript 389260 390591 2267 + . transcript_id "MPT000072"; gene_id "MPG000072"; +NC_000962.3 miniprot exon 389260 390591 2267 + . transcript_id "MPT000072"; gene_id "MPG000072"; +NC_000962.3 miniprot CDS 389260 390588 2267 + 0 transcript_id "MPT000072"; gene_id "MPG000072"; +NC_000962.3 miniprot gene 396201 397367 2002 + . gene_id "MPG000073"; +NC_000962.3 miniprot transcript 396201 397367 2002 + . transcript_id "MPT000073"; gene_id "MPG000073"; +NC_000962.3 miniprot exon 396201 397367 2002 + . transcript_id "MPT000073"; gene_id "MPG000073"; +NC_000962.3 miniprot CDS 396201 397364 2002 + 0 transcript_id "MPT000073"; gene_id "MPG000073"; +NC_000962.3 miniprot gene 236550 237209 1100 + . gene_id "MPG000074"; +NC_000962.3 miniprot transcript 236550 237209 1100 + . transcript_id "MPT000074"; gene_id "MPG000074"; +NC_000962.3 miniprot exon 236550 237209 1100 + . transcript_id "MPT000074"; gene_id "MPG000074"; +NC_000962.3 miniprot CDS 236550 237206 1100 + 0 transcript_id "MPT000074"; gene_id "MPG000074"; +NC_000962.3 miniprot gene 314864 315766 1583 - . gene_id "MPG000075"; +NC_000962.3 miniprot transcript 314864 315766 1583 - . transcript_id "MPT000075"; gene_id "MPG000075"; +NC_000962.3 miniprot exon 314864 315766 1583 - . transcript_id "MPT000075"; gene_id "MPG000075"; +NC_000962.3 miniprot CDS 314867 315766 1583 - 0 transcript_id "MPT000075"; gene_id "MPG000075"; +NC_000962.3 miniprot gene 176665 176952 482 - . gene_id "MPG000076"; +NC_000962.3 miniprot transcript 176665 176952 482 - . transcript_id "MPT000076"; gene_id "MPG000076"; +NC_000962.3 miniprot exon 176665 176952 482 - . transcript_id "MPT000076"; gene_id "MPG000076"; +NC_000962.3 miniprot CDS 176668 176952 482 - 0 transcript_id "MPT000076"; gene_id "MPG000076"; +NC_000962.3 miniprot gene 243384 244487 1787 + . gene_id "MPG000077"; +NC_000962.3 miniprot transcript 243384 244487 1787 + . transcript_id "MPT000077"; gene_id "MPG000077"; +NC_000962.3 miniprot exon 243384 244487 1787 + . transcript_id "MPT000077"; gene_id "MPG000077"; +NC_000962.3 miniprot CDS 243384 244484 1787 + 0 transcript_id "MPT000077"; gene_id "MPG000077"; +NC_000962.3 miniprot gene 367248 375711 1832 - . gene_id "MPG000078"; +NC_000962.3 miniprot transcript 367248 375711 1832 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 374905 375711 782 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 374905 375711 782 - 0 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 371786 372281 573 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 371786 372281 573 - 0 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 370462 370749 87 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 370462 370749 87 - 2 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 368891 369747 88 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 368891 369747 88 - 2 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 367973 368208 43 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 367973 368208 43 - 2 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot exon 367248 367646 259 - . transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot CDS 367248 367646 259 - 0 transcript_id "MPT000078"; gene_id "MPG000078"; +NC_000962.3 miniprot gene 530751 532214 2496 - . gene_id "MPG000079"; +NC_000962.3 miniprot transcript 530751 532214 2496 - . transcript_id "MPT000079"; gene_id "MPG000079"; +NC_000962.3 miniprot exon 530751 532214 2496 - . transcript_id "MPT000079"; gene_id "MPG000079"; +NC_000962.3 miniprot CDS 530754 532214 2496 - 0 transcript_id "MPT000079"; gene_id "MPG000079"; +NC_000962.3 miniprot gene 483228 483656 733 - . gene_id "MPG000080"; +NC_000962.3 miniprot transcript 483228 483656 733 - . transcript_id "MPT000080"; gene_id "MPG000080"; +NC_000962.3 miniprot exon 483228 483656 733 - . transcript_id "MPT000080"; gene_id "MPG000080"; +NC_000962.3 miniprot CDS 483231 483656 733 - 0 transcript_id "MPT000080"; gene_id "MPG000080"; +NC_000962.3 miniprot gene 646298 647962 2837 + . gene_id "MPG000081"; +NC_000962.3 miniprot transcript 646298 647962 2837 + . transcript_id "MPT000081"; gene_id "MPG000081"; +NC_000962.3 miniprot exon 646298 647962 2837 + . transcript_id "MPT000081"; gene_id "MPG000081"; +NC_000962.3 miniprot CDS 646298 647959 2837 + 0 transcript_id "MPT000081"; gene_id "MPG000081"; +NC_000962.3 miniprot gene 650407 650745 590 - . gene_id "MPG000082"; +NC_000962.3 miniprot transcript 650407 650745 590 - . transcript_id "MPT000082"; gene_id "MPG000082"; +NC_000962.3 miniprot exon 650407 650745 590 - . transcript_id "MPT000082"; gene_id "MPG000082"; +NC_000962.3 miniprot CDS 650410 650745 590 - 0 transcript_id "MPT000082"; gene_id "MPG000082"; +NC_000962.3 miniprot gene 661003 661242 228 + . gene_id "MPG000083"; +NC_000962.3 miniprot transcript 661003 661242 228 + . transcript_id "MPT000083"; gene_id "MPG000083"; +NC_000962.3 miniprot exon 661003 661242 228 + . transcript_id "MPT000083"; gene_id "MPG000083"; +NC_000962.3 miniprot CDS 661003 661242 228 + 0 transcript_id "MPT000083"; gene_id "MPG000083"; +NC_000962.3 miniprot gene 648536 649672 1958 + . gene_id "MPG000084"; +NC_000962.3 miniprot transcript 648536 649672 1958 + . transcript_id "MPT000084"; gene_id "MPG000084"; +NC_000962.3 miniprot exon 648536 649672 1958 + . transcript_id "MPT000084"; gene_id "MPG000084"; +NC_000962.3 miniprot CDS 648536 649669 1958 + 0 transcript_id "MPT000084"; gene_id "MPG000084"; +NC_000962.3 miniprot gene 656013 657440 1085 - . gene_id "MPG000085"; +NC_000962.3 miniprot transcript 656013 657440 1085 - . transcript_id "MPT000085"; gene_id "MPG000085"; +NC_000962.3 miniprot exon 656013 657440 1085 - . transcript_id "MPT000085"; gene_id "MPG000085"; +NC_000962.3 miniprot CDS 656013 657440 1085 - 0 transcript_id "MPT000085"; gene_id "MPG000085"; +NC_000962.3 miniprot gene 306374 307858 2552 - . gene_id "MPG000086"; +NC_000962.3 miniprot transcript 306374 307858 2552 - . transcript_id "MPT000086"; gene_id "MPG000086"; +NC_000962.3 miniprot exon 306374 307858 2552 - . transcript_id "MPT000086"; gene_id "MPG000086"; +NC_000962.3 miniprot CDS 306377 307858 2552 - 0 transcript_id "MPT000086"; gene_id "MPG000086"; +NC_000962.3 miniprot gene 486055 519911 1303 + . gene_id "MPG000087"; +NC_000962.3 miniprot transcript 486055 519911 1303 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot exon 486055 489112 1162 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot CDS 486055 489112 1162 + 0 transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot exon 498533 498754 35 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot CDS 498533 498754 35 + 1 transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot exon 502401 502665 23 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot CDS 502401 502665 23 + 1 transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot exon 516176 516236 27 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot CDS 516176 516236 27 + 0 transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot exon 519724 519911 56 + . transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot CDS 519724 519911 56 + 2 transcript_id "MPT000087"; gene_id "MPG000087"; +NC_000962.3 miniprot gene 333502 336310 1040 - . gene_id "MPG000088"; +NC_000962.3 miniprot transcript 333502 336310 1040 - . transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot exon 335867 336310 452 - . transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot CDS 335867 336310 452 - 0 transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot exon 334914 335407 431 - . transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot CDS 334914 335407 431 - 0 transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot exon 333502 333640 157 - . transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot CDS 333505 333640 157 - 1 transcript_id "MPT000088"; gene_id "MPG000088"; +NC_000962.3 miniprot gene 177543 336310 942 - . gene_id "MPG000089"; +NC_000962.3 miniprot transcript 177543 336310 942 - . transcript_id "MPT000089"; gene_id "MPG000089"; +NC_000962.3 miniprot exon 336027 336310 290 - . transcript_id "MPT000089"; gene_id "MPG000089"; +NC_000962.3 miniprot CDS 336027 336310 290 - 0 transcript_id "MPT000089"; gene_id "MPG000089"; +NC_000962.3 miniprot exon 177543 178908 652 - . transcript_id "MPT000089"; gene_id "MPG000089"; +NC_000962.3 miniprot CDS 177546 178908 652 - 1 transcript_id "MPT000089"; gene_id "MPG000089"; +NC_000962.3 miniprot gene 265573 265896 201 + . gene_id "MPG000090"; +NC_000962.3 miniprot transcript 265573 265896 201 + . transcript_id "MPT000090"; gene_id "MPG000090"; +NC_000962.3 miniprot exon 265573 265896 201 + . transcript_id "MPT000090"; gene_id "MPG000090"; +NC_000962.3 miniprot CDS 265573 265896 201 + 0 transcript_id "MPT000090"; gene_id "MPG000090"; +NC_000962.3 miniprot gene 202476 204068 2753 + . gene_id "MPG000091"; +NC_000962.3 miniprot transcript 202476 204068 2753 + . transcript_id "MPT000091"; gene_id "MPG000091"; +NC_000962.3 miniprot exon 202476 204068 2753 + . transcript_id "MPT000091"; gene_id "MPG000091"; +NC_000962.3 miniprot CDS 202476 204065 2753 + 0 transcript_id "MPT000091"; gene_id "MPG000091"; +NC_000962.3 miniprot gene 209703 210812 1961 - . gene_id "MPG000092"; +NC_000962.3 miniprot transcript 209703 210812 1961 - . transcript_id "MPT000092"; gene_id "MPG000092"; +NC_000962.3 miniprot exon 209703 210812 1961 - . transcript_id "MPT000092"; gene_id "MPG000092"; +NC_000962.3 miniprot CDS 209706 210812 1961 - 0 transcript_id "MPT000092"; gene_id "MPG000092"; +NC_000962.3 miniprot gene 214969 215718 1247 + . gene_id "MPG000093"; +NC_000962.3 miniprot transcript 214969 215718 1247 + . transcript_id "MPT000093"; gene_id "MPG000093"; +NC_000962.3 miniprot exon 214969 215718 1247 + . transcript_id "MPT000093"; gene_id "MPG000093"; +NC_000962.3 miniprot CDS 214969 215715 1247 + 0 transcript_id "MPT000093"; gene_id "MPG000093"; +NC_000962.3 miniprot gene 224724 226571 3169 - . gene_id "MPG000094"; +NC_000962.3 miniprot transcript 224724 226571 3169 - . transcript_id "MPT000094"; gene_id "MPG000094"; +NC_000962.3 miniprot exon 224724 226571 3169 - . transcript_id "MPT000094"; gene_id "MPG000094"; +NC_000962.3 miniprot CDS 224727 226571 3169 - 0 transcript_id "MPT000094"; gene_id "MPG000094"; +NC_000962.3 miniprot gene 400192 401703 2660 + . gene_id "MPG000095"; +NC_000962.3 miniprot transcript 400192 401703 2660 + . transcript_id "MPT000095"; gene_id "MPG000095"; +NC_000962.3 miniprot exon 400192 401703 2660 + . transcript_id "MPT000095"; gene_id "MPG000095"; +NC_000962.3 miniprot CDS 400192 401700 2660 + 0 transcript_id "MPT000095"; gene_id "MPG000095"; +NC_000962.3 miniprot gene 606551 608062 2651 + . gene_id "MPG000096"; +NC_000962.3 miniprot transcript 606551 608062 2651 + . transcript_id "MPT000096"; gene_id "MPG000096"; +NC_000962.3 miniprot exon 606551 608062 2651 + . transcript_id "MPT000096"; gene_id "MPG000096"; +NC_000962.3 miniprot CDS 606551 608059 2651 + 0 transcript_id "MPT000096"; gene_id "MPG000096"; +NC_000962.3 miniprot gene 227868 228545 207 + . gene_id "MPG000097"; +NC_000962.3 miniprot transcript 227868 228545 207 + . transcript_id "MPT000097"; gene_id "MPG000097"; +NC_000962.3 miniprot exon 227868 228545 207 + . transcript_id "MPT000097"; gene_id "MPG000097"; +NC_000962.3 miniprot CDS 227868 228545 207 + 0 transcript_id "MPT000097"; gene_id "MPG000097"; +NC_000962.3 miniprot gene 74629 75198 935 - . gene_id "MPG000098"; +NC_000962.3 miniprot transcript 74629 75198 935 - . transcript_id "MPT000098"; gene_id "MPG000098"; +NC_000962.3 miniprot exon 74629 75198 935 - . transcript_id "MPT000098"; gene_id "MPG000098"; +NC_000962.3 miniprot CDS 74632 75198 935 - 0 transcript_id "MPT000098"; gene_id "MPG000098"; +NC_000962.3 miniprot gene 27023 27442 740 - . gene_id "MPG000099"; +NC_000962.3 miniprot transcript 27023 27442 740 - . transcript_id "MPT000099"; gene_id "MPG000099"; +NC_000962.3 miniprot exon 27023 27442 740 - . transcript_id "MPT000099"; gene_id "MPG000099"; +NC_000962.3 miniprot CDS 27026 27442 740 - 0 transcript_id "MPT000099"; gene_id "MPG000099"; +NC_000962.3 miniprot gene 322764 323273 877 - . gene_id "MPG000100"; +NC_000962.3 miniprot transcript 322764 323273 877 - . transcript_id "MPT000100"; gene_id "MPG000100"; +NC_000962.3 miniprot exon 322764 323273 877 - . transcript_id "MPT000100"; gene_id "MPG000100"; +NC_000962.3 miniprot CDS 322767 323273 877 - 0 transcript_id "MPT000100"; gene_id "MPG000100"; +NC_000962.3 miniprot gene 324567 326249 2839 + . gene_id "MPG000101"; +NC_000962.3 miniprot transcript 324567 326249 2839 + . transcript_id "MPT000101"; gene_id "MPG000101"; +NC_000962.3 miniprot exon 324567 326249 2839 + . transcript_id "MPT000101"; gene_id "MPG000101"; +NC_000962.3 miniprot CDS 324567 326246 2839 + 0 transcript_id "MPT000101"; gene_id "MPG000101"; +NC_000962.3 miniprot gene 106734 107603 1560 + . gene_id "MPG000102"; +NC_000962.3 miniprot transcript 106734 107603 1560 + . transcript_id "MPT000102"; gene_id "MPG000102"; +NC_000962.3 miniprot exon 106734 107603 1560 + . transcript_id "MPT000102"; gene_id "MPG000102"; +NC_000962.3 miniprot CDS 106734 107600 1560 + 0 transcript_id "MPT000102"; gene_id "MPG000102"; +NC_000962.3 miniprot gene 137319 137909 981 + . gene_id "MPG000103"; +NC_000962.3 miniprot transcript 137319 137909 981 + . transcript_id "MPT000103"; gene_id "MPG000103"; +NC_000962.3 miniprot exon 137319 137909 981 + . transcript_id "MPT000103"; gene_id "MPG000103"; +NC_000962.3 miniprot CDS 137319 137906 981 + 0 transcript_id "MPT000103"; gene_id "MPG000103"; +NC_000962.3 miniprot gene 26288 26566 55 - . gene_id "MPG000104"; +NC_000962.3 miniprot transcript 26288 26566 55 - . transcript_id "MPT000104"; gene_id "MPG000104"; +NC_000962.3 miniprot exon 26288 26566 55 - . transcript_id "MPT000104"; gene_id "MPG000104"; +NC_000962.3 miniprot CDS 26288 26566 55 - 0 transcript_id "MPT000104"; gene_id "MPG000104"; +NC_000962.3 miniprot gene 466801 468004 651 - . gene_id "MPG000105"; +NC_000962.3 miniprot transcript 466801 468004 651 - . transcript_id "MPT000105"; gene_id "MPG000105"; +NC_000962.3 miniprot exon 466801 468004 651 - . transcript_id "MPT000105"; gene_id "MPG000105"; +NC_000962.3 miniprot CDS 466801 468004 651 - 0 transcript_id "MPT000105"; gene_id "MPG000105"; +NC_000962.3 miniprot gene 164712 165260 983 - . gene_id "MPG000106"; +NC_000962.3 miniprot transcript 164712 165260 983 - . transcript_id "MPT000106"; gene_id "MPG000106"; +NC_000962.3 miniprot exon 164712 165260 983 - . transcript_id "MPT000106"; gene_id "MPG000106"; +NC_000962.3 miniprot CDS 164715 165260 983 - 0 transcript_id "MPT000106"; gene_id "MPG000106"; +NC_000962.3 miniprot gene 597259 600012 936 + . gene_id "MPG000107"; +NC_000962.3 miniprot transcript 597259 600012 936 + . transcript_id "MPT000107"; gene_id "MPG000107"; +NC_000962.3 miniprot exon 597259 600012 936 + . transcript_id "MPT000107"; gene_id "MPG000107"; +NC_000962.3 miniprot CDS 597259 600012 936 + 0 transcript_id "MPT000107"; gene_id "MPG000107"; +NC_000962.3 miniprot gene 415481 416926 1774 - . gene_id "MPG000108"; +NC_000962.3 miniprot transcript 415481 416926 1774 - . transcript_id "MPT000108"; gene_id "MPG000108"; +NC_000962.3 miniprot exon 415481 416926 1774 - . transcript_id "MPT000108"; gene_id "MPG000108"; +NC_000962.3 miniprot CDS 415481 416926 1774 - 0 transcript_id "MPT000108"; gene_id "MPG000108"; +NC_000962.3 miniprot gene 361334 455858 1564 + . gene_id "MPG000109"; +NC_000962.3 miniprot transcript 361334 455858 1564 + . transcript_id "MPT000109"; gene_id "MPG000109"; +NC_000962.3 miniprot exon 361334 363025 1408 + . transcript_id "MPT000109"; gene_id "MPG000109"; +NC_000962.3 miniprot CDS 361334 363025 1408 + 0 transcript_id "MPT000109"; gene_id "MPG000109"; +NC_000962.3 miniprot exon 455655 455858 156 + . transcript_id "MPT000109"; gene_id "MPG000109"; +NC_000962.3 miniprot CDS 455655 455855 156 + 0 transcript_id "MPT000109"; gene_id "MPG000109"; +NC_000962.3 miniprot gene 559888 560748 1492 + . gene_id "MPG000110"; +NC_000962.3 miniprot transcript 559888 560748 1492 + . transcript_id "MPT000110"; gene_id "MPG000110"; +NC_000962.3 miniprot exon 559888 560748 1492 + . transcript_id "MPT000110"; gene_id "MPG000110"; +NC_000962.3 miniprot CDS 559888 560745 1492 + 0 transcript_id "MPT000110"; gene_id "MPG000110"; +NC_000962.3 miniprot gene 361334 455846 1612 + . gene_id "MPG000111"; +NC_000962.3 miniprot transcript 361334 455846 1612 + . transcript_id "MPT000111"; gene_id "MPG000111"; +NC_000962.3 miniprot exon 361334 363109 1458 + . transcript_id "MPT000111"; gene_id "MPG000111"; +NC_000962.3 miniprot CDS 361334 363109 1458 + 0 transcript_id "MPT000111"; gene_id "MPG000111"; +NC_000962.3 miniprot exon 455655 455846 154 + . transcript_id "MPT000111"; gene_id "MPG000111"; +NC_000962.3 miniprot CDS 455655 455846 154 + 0 transcript_id "MPT000111"; gene_id "MPG000111"; +NC_000962.3 miniprot gene 374527 572366 2637 + . gene_id "MPG000112"; +NC_000962.3 miniprot transcript 374527 572366 2637 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 374527 374841 57 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 374527 374841 57 + 0 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 421542 421708 38 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 421542 421708 38 + 0 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 422805 422857 16 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 422805 422857 16 + 1 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 424856 427117 56 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 424856 427117 56 + 2 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 453813 453956 35 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 453813 453956 35 + 2 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 485738 488735 2314 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 485738 488735 2314 + 2 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 502345 503043 64 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 502345 503043 64 + 1 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot exon 571782 572366 57 + . transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot CDS 571782 572366 57 + 0 transcript_id "MPT000112"; gene_id "MPG000112"; +NC_000962.3 miniprot gene 438822 439649 1408 + . gene_id "MPG000113"; +NC_000962.3 miniprot transcript 438822 439649 1408 + . transcript_id "MPT000113"; gene_id "MPG000113"; +NC_000962.3 miniprot exon 438822 439649 1408 + . transcript_id "MPT000113"; gene_id "MPG000113"; +NC_000962.3 miniprot CDS 438822 439646 1408 + 0 transcript_id "MPT000113"; gene_id "MPG000113"; +NC_000962.3 miniprot gene 151148 152215 1803 + . gene_id "MPG000114"; +NC_000962.3 miniprot transcript 151148 152215 1803 + . transcript_id "MPT000114"; gene_id "MPG000114"; +NC_000962.3 miniprot exon 151148 152215 1803 + . transcript_id "MPT000114"; gene_id "MPG000114"; +NC_000962.3 miniprot CDS 151148 152212 1803 + 0 transcript_id "MPT000114"; gene_id "MPG000114"; +NC_000962.3 miniprot gene 367532 416962 874 - . gene_id "MPG000115"; +NC_000962.3 miniprot transcript 367532 416962 874 - . transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot exon 415671 416962 756 - . transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot CDS 415671 416962 756 - 0 transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot exon 413466 413518 28 - . transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot CDS 413466 413518 28 - 1 transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot exon 380079 380169 40 - . transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot CDS 380079 380169 40 - 2 transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot exon 367532 367646 50 - . transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot CDS 367532 367646 50 - 1 transcript_id "MPT000115"; gene_id "MPG000115"; +NC_000962.3 miniprot gene 301735 302028 497 - . gene_id "MPG000116"; +NC_000962.3 miniprot transcript 301735 302028 497 - . transcript_id "MPT000116"; gene_id "MPG000116"; +NC_000962.3 miniprot exon 301735 302028 497 - . transcript_id "MPT000116"; gene_id "MPG000116"; +NC_000962.3 miniprot CDS 301738 302028 497 - 0 transcript_id "MPT000116"; gene_id "MPG000116"; +NC_000962.3 miniprot gene 305453 305809 603 + . gene_id "MPG000117"; +NC_000962.3 miniprot transcript 305453 305809 603 + . transcript_id "MPT000117"; gene_id "MPG000117"; +NC_000962.3 miniprot exon 305453 305809 603 + . transcript_id "MPT000117"; gene_id "MPG000117"; +NC_000962.3 miniprot CDS 305453 305806 603 + 0 transcript_id "MPT000117"; gene_id "MPG000117"; +NC_000962.3 miniprot gene 354504 355877 857 + . gene_id "MPG000118"; +NC_000962.3 miniprot transcript 354504 355877 857 + . transcript_id "MPT000118"; gene_id "MPG000118"; +NC_000962.3 miniprot exon 354504 355877 857 + . transcript_id "MPT000118"; gene_id "MPG000118"; +NC_000962.3 miniprot CDS 354504 355877 857 + 0 transcript_id "MPT000118"; gene_id "MPG000118"; +NC_000962.3 miniprot gene 697961 698934 270 - . gene_id "MPG000119"; +NC_000962.3 miniprot transcript 697961 698934 270 - . transcript_id "MPT000119"; gene_id "MPG000119"; +NC_000962.3 miniprot exon 697961 698934 270 - . transcript_id "MPT000119"; gene_id "MPG000119"; +NC_000962.3 miniprot CDS 697961 698934 270 - 0 transcript_id "MPT000119"; gene_id "MPG000119"; +NC_000962.3 miniprot gene 665434 665601 312 - . gene_id "MPG000120"; +NC_000962.3 miniprot transcript 665434 665601 312 - . transcript_id "MPT000120"; gene_id "MPG000120"; +NC_000962.3 miniprot exon 665434 665601 312 - . transcript_id "MPT000120"; gene_id "MPG000120"; +NC_000962.3 miniprot CDS 665437 665601 312 - 0 transcript_id "MPT000120"; gene_id "MPG000120"; +NC_000962.3 miniprot gene 310294 310749 758 - . gene_id "MPG000121"; +NC_000962.3 miniprot transcript 310294 310749 758 - . transcript_id "MPT000121"; gene_id "MPG000121"; +NC_000962.3 miniprot exon 310294 310749 758 - . transcript_id "MPT000121"; gene_id "MPG000121"; +NC_000962.3 miniprot CDS 310297 310749 758 - 0 transcript_id "MPT000121"; gene_id "MPG000121"; +NC_000962.3 miniprot gene 478590 478970 128 - . gene_id "MPG000122"; +NC_000962.3 miniprot transcript 478590 478970 128 - . transcript_id "MPT000122"; gene_id "MPG000122"; +NC_000962.3 miniprot exon 478590 478970 128 - . transcript_id "MPT000122"; gene_id "MPG000122"; +NC_000962.3 miniprot CDS 478590 478970 128 - 0 transcript_id "MPT000122"; gene_id "MPG000122"; +NC_000962.3 miniprot gene 80624 81673 1717 + . gene_id "MPG000123"; +NC_000962.3 miniprot transcript 80624 81673 1717 + . transcript_id "MPT000123"; gene_id "MPG000123"; +NC_000962.3 miniprot exon 80624 81673 1717 + . transcript_id "MPT000123"; gene_id "MPG000123"; +NC_000962.3 miniprot CDS 80624 81670 1717 + 0 transcript_id "MPT000123"; gene_id "MPG000123"; +NC_000962.3 miniprot gene 457841 458380 882 - . gene_id "MPG000124"; +NC_000962.3 miniprot transcript 457841 458380 882 - . transcript_id "MPT000124"; gene_id "MPG000124"; +NC_000962.3 miniprot exon 457841 458380 882 - . transcript_id "MPT000124"; gene_id "MPG000124"; +NC_000962.3 miniprot CDS 457844 458380 882 - 0 transcript_id "MPT000124"; gene_id "MPG000124"; +NC_000962.3 miniprot gene 21637 23181 2619 - . gene_id "MPG000125"; +NC_000962.3 miniprot transcript 21637 23181 2619 - . transcript_id "MPT000125"; gene_id "MPG000125"; +NC_000962.3 miniprot exon 21637 23181 2619 - . transcript_id "MPT000125"; gene_id "MPG000125"; +NC_000962.3 miniprot CDS 21640 23181 2619 - 0 transcript_id "MPT000125"; gene_id "MPG000125"; +NC_000962.3 miniprot gene 407537 434673 544 - . gene_id "MPG000126"; +NC_000962.3 miniprot transcript 407537 434673 544 - . transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot exon 434145 434673 465 - . transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot CDS 434145 434673 465 - 0 transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot exon 432537 433003 38 - . transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot CDS 432537 433003 38 - 2 transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot exon 407537 407713 41 - . transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot CDS 407537 407713 41 - 0 transcript_id "MPT000126"; gene_id "MPG000126"; +NC_000962.3 miniprot gene 644490 645470 1633 + . gene_id "MPG000127"; +NC_000962.3 miniprot transcript 644490 645470 1633 + . transcript_id "MPT000127"; gene_id "MPG000127"; +NC_000962.3 miniprot exon 644490 645470 1633 + . transcript_id "MPT000127"; gene_id "MPG000127"; +NC_000962.3 miniprot CDS 644490 645467 1633 + 0 transcript_id "MPT000127"; gene_id "MPG000127"; +NC_000962.3 miniprot gene 238392 241292 4902 - . gene_id "MPG000128"; +NC_000962.3 miniprot transcript 238392 241292 4902 - . transcript_id "MPT000128"; gene_id "MPG000128"; +NC_000962.3 miniprot exon 238392 241292 4902 - . transcript_id "MPT000128"; gene_id "MPG000128"; +NC_000962.3 miniprot CDS 238395 241292 4902 - 0 transcript_id "MPT000128"; gene_id "MPG000128"; +NC_000962.3 miniprot gene 484079 485680 416 + . gene_id "MPG000129"; +NC_000962.3 miniprot transcript 484079 485680 416 + . transcript_id "MPT000129"; gene_id "MPG000129"; +NC_000962.3 miniprot exon 484079 485680 416 + . transcript_id "MPT000129"; gene_id "MPG000129"; +NC_000962.3 miniprot CDS 484079 485680 416 + 0 transcript_id "MPT000129"; gene_id "MPG000129"; +NC_000962.3 miniprot gene 602819 604516 2891 + . gene_id "MPG000130"; +NC_000962.3 miniprot transcript 602819 604516 2891 + . transcript_id "MPT000130"; gene_id "MPG000130"; +NC_000962.3 miniprot exon 602819 604516 2891 + . transcript_id "MPT000130"; gene_id "MPG000130"; +NC_000962.3 miniprot CDS 602819 604513 2891 + 0 transcript_id "MPT000130"; gene_id "MPG000130"; +NC_000962.3 miniprot gene 466672 467406 1245 - . gene_id "MPG000131"; +NC_000962.3 miniprot transcript 466672 467406 1245 - . transcript_id "MPT000131"; gene_id "MPG000131"; +NC_000962.3 miniprot exon 466672 467406 1245 - . transcript_id "MPT000131"; gene_id "MPG000131"; +NC_000962.3 miniprot CDS 466675 467406 1245 - 0 transcript_id "MPT000131"; gene_id "MPG000131"; +NC_000962.3 miniprot gene 131382 150708 1467 + . gene_id "MPG000132"; +NC_000962.3 miniprot transcript 131382 150708 1467 + . transcript_id "MPT000132"; gene_id "MPG000132"; +NC_000962.3 miniprot exon 131382 132257 828 + . transcript_id "MPT000132"; gene_id "MPG000132"; +NC_000962.3 miniprot CDS 131382 132257 828 + 0 transcript_id "MPT000132"; gene_id "MPG000132"; +NC_000962.3 miniprot exon 149980 150708 639 + . transcript_id "MPT000132"; gene_id "MPG000132"; +NC_000962.3 miniprot CDS 149980 150708 639 + 0 transcript_id "MPT000132"; gene_id "MPG000132"; +NC_000962.3 miniprot gene 613038 614342 2198 + . gene_id "MPG000133"; +NC_000962.3 miniprot transcript 613038 614342 2198 + . transcript_id "MPT000133"; gene_id "MPG000133"; +NC_000962.3 miniprot exon 613038 614342 2198 + . transcript_id "MPT000133"; gene_id "MPG000133"; +NC_000962.3 miniprot CDS 613038 614339 2198 + 0 transcript_id "MPT000133"; gene_id "MPG000133"; +NC_000962.3 miniprot gene 216269 218344 3600 + . gene_id "MPG000134"; +NC_000962.3 miniprot transcript 216269 218344 3600 + . transcript_id "MPT000134"; gene_id "MPG000134"; +NC_000962.3 miniprot exon 216269 218344 3600 + . transcript_id "MPT000134"; gene_id "MPG000134"; +NC_000962.3 miniprot CDS 216269 218341 3600 + 0 transcript_id "MPT000134"; gene_id "MPG000134"; +NC_000962.3 miniprot gene 573250 573801 247 - . gene_id "MPG000135"; +NC_000962.3 miniprot transcript 573250 573801 247 - . transcript_id "MPT000135"; gene_id "MPG000135"; +NC_000962.3 miniprot exon 573250 573801 247 - . transcript_id "MPT000135"; gene_id "MPG000135"; +NC_000962.3 miniprot CDS 573250 573801 247 - 0 transcript_id "MPT000135"; gene_id "MPG000135"; +NC_000962.3 miniprot gene 72274 74511 3844 - . gene_id "MPG000136"; +NC_000962.3 miniprot transcript 72274 74511 3844 - . transcript_id "MPT000136"; gene_id "MPG000136"; +NC_000962.3 miniprot exon 72274 74511 3844 - . transcript_id "MPT000136"; gene_id "MPG000136"; +NC_000962.3 miniprot CDS 72277 74511 3844 - 0 transcript_id "MPT000136"; gene_id "MPG000136"; +NC_000962.3 miniprot gene 298863 300803 3397 - . gene_id "MPG000137"; +NC_000962.3 miniprot transcript 298863 300803 3397 - . transcript_id "MPT000137"; gene_id "MPG000137"; +NC_000962.3 miniprot exon 298863 300803 3397 - . transcript_id "MPT000137"; gene_id "MPG000137"; +NC_000962.3 miniprot CDS 298866 300803 3397 - 0 transcript_id "MPT000137"; gene_id "MPG000137"; +NC_000962.3 miniprot gene 677710 677925 349 + . gene_id "MPG000138"; +NC_000962.3 miniprot transcript 677710 677925 349 + . transcript_id "MPT000138"; gene_id "MPG000138"; +NC_000962.3 miniprot exon 677710 677925 349 + . transcript_id "MPT000138"; gene_id "MPG000138"; +NC_000962.3 miniprot CDS 677710 677922 349 + 0 transcript_id "MPT000138"; gene_id "MPG000138"; +NC_000962.3 miniprot gene 292171 293493 2210 + . gene_id "MPG000139"; +NC_000962.3 miniprot transcript 292171 293493 2210 + . transcript_id "MPT000139"; gene_id "MPG000139"; +NC_000962.3 miniprot exon 292171 293493 2210 + . transcript_id "MPT000139"; gene_id "MPG000139"; +NC_000962.3 miniprot CDS 292171 293490 2210 + 0 transcript_id "MPT000139"; gene_id "MPG000139"; +NC_000962.3 miniprot gene 162644 163249 999 - . gene_id "MPG000140"; +NC_000962.3 miniprot transcript 162644 163249 999 - . transcript_id "MPT000140"; gene_id "MPG000140"; +NC_000962.3 miniprot exon 162644 163249 999 - . transcript_id "MPT000140"; gene_id "MPG000140"; +NC_000962.3 miniprot CDS 162647 163249 999 - 0 transcript_id "MPT000140"; gene_id "MPG000140"; +NC_000962.3 miniprot gene 170284 171126 1440 + . gene_id "MPG000141"; +NC_000962.3 miniprot transcript 170284 171126 1440 + . transcript_id "MPT000141"; gene_id "MPG000141"; +NC_000962.3 miniprot exon 170284 171126 1440 + . transcript_id "MPT000141"; gene_id "MPG000141"; +NC_000962.3 miniprot CDS 170284 171123 1440 + 0 transcript_id "MPT000141"; gene_id "MPG000141"; +NC_000962.3 miniprot gene 573046 573801 1247 - . gene_id "MPG000142"; +NC_000962.3 miniprot transcript 573046 573801 1247 - . transcript_id "MPT000142"; gene_id "MPG000142"; +NC_000962.3 miniprot exon 573046 573801 1247 - . transcript_id "MPT000142"; gene_id "MPG000142"; +NC_000962.3 miniprot CDS 573049 573801 1247 - 0 transcript_id "MPT000142"; gene_id "MPG000142"; +NC_000962.3 miniprot gene 59409 59867 751 + . gene_id "MPG000143"; +NC_000962.3 miniprot transcript 59409 59867 751 + . transcript_id "MPT000143"; gene_id "MPG000143"; +NC_000962.3 miniprot exon 59409 59867 751 + . transcript_id "MPT000143"; gene_id "MPG000143"; +NC_000962.3 miniprot CDS 59409 59864 751 + 0 transcript_id "MPT000143"; gene_id "MPG000143"; +NC_000962.3 miniprot gene 565797 566396 950 + . gene_id "MPG000144"; +NC_000962.3 miniprot transcript 565797 566396 950 + . transcript_id "MPT000144"; gene_id "MPG000144"; +NC_000962.3 miniprot exon 565797 566396 950 + . transcript_id "MPT000144"; gene_id "MPG000144"; +NC_000962.3 miniprot CDS 565797 566393 950 + 0 transcript_id "MPT000144"; gene_id "MPG000144"; +NC_000962.3 miniprot gene 97758 98351 1049 + . gene_id "MPG000145"; +NC_000962.3 miniprot transcript 97758 98351 1049 + . transcript_id "MPT000145"; gene_id "MPG000145"; +NC_000962.3 miniprot exon 97758 98351 1049 + . transcript_id "MPT000145"; gene_id "MPG000145"; +NC_000962.3 miniprot CDS 97758 98348 1049 + 0 transcript_id "MPT000145"; gene_id "MPG000145"; +NC_000962.3 miniprot gene 419835 421712 3129 + . gene_id "MPG000146"; +NC_000962.3 miniprot transcript 419835 421712 3129 + . transcript_id "MPT000146"; gene_id "MPG000146"; +NC_000962.3 miniprot exon 419835 421712 3129 + . transcript_id "MPT000146"; gene_id "MPG000146"; +NC_000962.3 miniprot CDS 419835 421709 3129 + 0 transcript_id "MPT000146"; gene_id "MPG000146"; +NC_000962.3 miniprot gene 645467 646255 1356 + . gene_id "MPG000147"; +NC_000962.3 miniprot transcript 645467 646255 1356 + . transcript_id "MPT000147"; gene_id "MPG000147"; +NC_000962.3 miniprot exon 645467 646255 1356 + . transcript_id "MPT000147"; gene_id "MPG000147"; +NC_000962.3 miniprot CDS 645467 646252 1356 + 0 transcript_id "MPT000147"; gene_id "MPG000147"; +NC_000962.3 miniprot gene 119936 122173 733 - . gene_id "MPG000148"; +NC_000962.3 miniprot transcript 119936 122173 733 - . transcript_id "MPT000148"; gene_id "MPG000148"; +NC_000962.3 miniprot exon 119936 122173 733 - . transcript_id "MPT000148"; gene_id "MPG000148"; +NC_000962.3 miniprot CDS 119936 122173 733 - 0 transcript_id "MPT000148"; gene_id "MPG000148"; +NC_000962.3 miniprot gene 415502 416965 2485 - . gene_id "MPG000149"; +NC_000962.3 miniprot transcript 415502 416965 2485 - . transcript_id "MPT000149"; gene_id "MPG000149"; +NC_000962.3 miniprot exon 415502 416965 2485 - . transcript_id "MPT000149"; gene_id "MPG000149"; +NC_000962.3 miniprot CDS 415505 416965 2485 - 0 transcript_id "MPT000149"; gene_id "MPG000149"; +NC_000962.3 miniprot gene 104805 105101 486 - . gene_id "MPG000150"; +NC_000962.3 miniprot transcript 104805 105101 486 - . transcript_id "MPT000150"; gene_id "MPG000150"; +NC_000962.3 miniprot exon 104805 105101 486 - . transcript_id "MPT000150"; gene_id "MPG000150"; +NC_000962.3 miniprot CDS 104808 105101 486 - 0 transcript_id "MPT000150"; gene_id "MPG000150"; +NC_000962.3 miniprot gene 623871 675922 3063 - . gene_id "MPG000151"; +NC_000962.3 miniprot transcript 623871 675922 3063 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot exon 675067 675922 860 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot CDS 675067 675922 860 - 0 transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot exon 671974 674376 1874 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot CDS 671974 674376 1874 - 2 transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot exon 631136 631531 92 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot CDS 631136 631531 92 - 1 transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot exon 625581 625963 77 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot CDS 625581 625963 77 - 2 transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot exon 623871 624447 160 - . transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot CDS 623871 624447 160 - 0 transcript_id "MPT000151"; gene_id "MPG000151"; +NC_000962.3 miniprot gene 690501 692027 2629 + . gene_id "MPG000152"; +NC_000962.3 miniprot transcript 690501 692027 2629 + . transcript_id "MPT000152"; gene_id "MPG000152"; +NC_000962.3 miniprot exon 690501 692027 2629 + . transcript_id "MPT000152"; gene_id "MPG000152"; +NC_000962.3 miniprot CDS 690501 692024 2629 + 0 transcript_id "MPT000152"; gene_id "MPG000152"; +NC_000962.3 miniprot gene 452294 453154 1440 - . gene_id "MPG000153"; +NC_000962.3 miniprot transcript 452294 453154 1440 - . transcript_id "MPT000153"; gene_id "MPG000153"; +NC_000962.3 miniprot exon 452294 453154 1440 - . transcript_id "MPT000153"; gene_id "MPG000153"; +NC_000962.3 miniprot CDS 452297 453154 1440 - 0 transcript_id "MPT000153"; gene_id "MPG000153"; +NC_000962.3 miniprot gene 467459 468001 909 - . gene_id "MPG000154"; +NC_000962.3 miniprot transcript 467459 468001 909 - . transcript_id "MPT000154"; gene_id "MPG000154"; +NC_000962.3 miniprot exon 467459 468001 909 - . transcript_id "MPT000154"; gene_id "MPG000154"; +NC_000962.3 miniprot CDS 467462 468001 909 - 0 transcript_id "MPT000154"; gene_id "MPG000154"; +NC_000962.3 miniprot gene 324681 326240 1060 + . gene_id "MPG000155"; +NC_000962.3 miniprot transcript 324681 326240 1060 + . transcript_id "MPT000155"; gene_id "MPG000155"; +NC_000962.3 miniprot exon 324681 326240 1060 + . transcript_id "MPT000155"; gene_id "MPG000155"; +NC_000962.3 miniprot CDS 324681 326240 1060 + 0 transcript_id "MPT000155"; gene_id "MPG000155"; +NC_000962.3 miniprot gene 365234 366142 1561 + . gene_id "MPG000156"; +NC_000962.3 miniprot transcript 365234 366142 1561 + . transcript_id "MPT000156"; gene_id "MPG000156"; +NC_000962.3 miniprot exon 365234 366142 1561 + . transcript_id "MPT000156"; gene_id "MPG000156"; +NC_000962.3 miniprot CDS 365234 366139 1561 + 0 transcript_id "MPT000156"; gene_id "MPG000156"; +NC_000962.3 miniprot gene 223564 224664 1989 + . gene_id "MPG000157"; +NC_000962.3 miniprot transcript 223564 224664 1989 + . transcript_id "MPT000157"; gene_id "MPG000157"; +NC_000962.3 miniprot exon 223564 224664 1989 + . transcript_id "MPT000157"; gene_id "MPG000157"; +NC_000962.3 miniprot CDS 223564 224661 1989 + 0 transcript_id "MPT000157"; gene_id "MPG000157"; +NC_000962.3 miniprot gene 694839 695231 644 - . gene_id "MPG000158"; +NC_000962.3 miniprot transcript 694839 695231 644 - . transcript_id "MPT000158"; gene_id "MPG000158"; +NC_000962.3 miniprot exon 694839 695231 644 - . transcript_id "MPT000158"; gene_id "MPG000158"; +NC_000962.3 miniprot CDS 694842 695231 644 - 0 transcript_id "MPT000158"; gene_id "MPG000158"; +NC_000962.3 miniprot gene 290686 291450 289 - . gene_id "MPG000159"; +NC_000962.3 miniprot transcript 290686 291450 289 - . transcript_id "MPT000159"; gene_id "MPG000159"; +NC_000962.3 miniprot exon 290686 291450 289 - . transcript_id "MPT000159"; gene_id "MPG000159"; +NC_000962.3 miniprot CDS 290686 291450 289 - 0 transcript_id "MPT000159"; gene_id "MPG000159"; +NC_000962.3 miniprot gene 142128 143876 2975 - . gene_id "MPG000160"; +NC_000962.3 miniprot transcript 142128 143876 2975 - . transcript_id "MPT000160"; gene_id "MPG000160"; +NC_000962.3 miniprot exon 142128 143876 2975 - . transcript_id "MPT000160"; gene_id "MPG000160"; +NC_000962.3 miniprot CDS 142131 143876 2975 - 0 transcript_id "MPT000160"; gene_id "MPG000160"; +NC_000962.3 miniprot gene 340995 379709 538 + . gene_id "MPG000161"; +NC_000962.3 miniprot transcript 340995 379709 538 + . transcript_id "MPT000161"; gene_id "MPG000161"; +NC_000962.3 miniprot exon 340995 341618 482 + . transcript_id "MPT000161"; gene_id "MPG000161"; +NC_000962.3 miniprot CDS 340995 341618 482 + 0 transcript_id "MPT000161"; gene_id "MPG000161"; +NC_000962.3 miniprot exon 379421 379709 56 + . transcript_id "MPT000161"; gene_id "MPG000161"; +NC_000962.3 miniprot CDS 379421 379709 56 + 1 transcript_id "MPT000161"; gene_id "MPG000161"; +NC_000962.3 miniprot gene 476679 477320 1104 - . gene_id "MPG000162"; +NC_000962.3 miniprot transcript 476679 477320 1104 - . transcript_id "MPT000162"; gene_id "MPG000162"; +NC_000962.3 miniprot exon 476679 477320 1104 - . transcript_id "MPT000162"; gene_id "MPG000162"; +NC_000962.3 miniprot CDS 476682 477320 1104 - 0 transcript_id "MPT000162"; gene_id "MPG000162"; +NC_000962.3 miniprot gene 479789 480160 620 + . gene_id "MPG000163"; +NC_000962.3 miniprot transcript 479789 480160 620 + . transcript_id "MPT000163"; gene_id "MPG000163"; +NC_000962.3 miniprot exon 479789 480160 620 + . transcript_id "MPT000163"; gene_id "MPG000163"; +NC_000962.3 miniprot CDS 479789 480157 620 + 0 transcript_id "MPT000163"; gene_id "MPG000163"; +NC_000962.3 miniprot gene 158315 159658 2336 - . gene_id "MPG000164"; +NC_000962.3 miniprot transcript 158315 159658 2336 - . transcript_id "MPT000164"; gene_id "MPG000164"; +NC_000962.3 miniprot exon 158315 159658 2336 - . transcript_id "MPT000164"; gene_id "MPG000164"; +NC_000962.3 miniprot CDS 158318 159658 2336 - 0 transcript_id "MPT000164"; gene_id "MPG000164"; +NC_000962.3 miniprot gene 332708 333136 753 - . gene_id "MPG000165"; +NC_000962.3 miniprot transcript 332708 333136 753 - . transcript_id "MPT000165"; gene_id "MPG000165"; +NC_000962.3 miniprot exon 332708 333136 753 - . transcript_id "MPT000165"; gene_id "MPG000165"; +NC_000962.3 miniprot CDS 332711 333136 753 - 0 transcript_id "MPT000165"; gene_id "MPG000165"; +NC_000962.3 miniprot gene 340998 341906 1570 + . gene_id "MPG000166"; +NC_000962.3 miniprot transcript 340998 341906 1570 + . transcript_id "MPT000166"; gene_id "MPG000166"; +NC_000962.3 miniprot exon 340998 341906 1570 + . transcript_id "MPT000166"; gene_id "MPG000166"; +NC_000962.3 miniprot CDS 340998 341903 1570 + 0 transcript_id "MPT000166"; gene_id "MPG000166"; +NC_000962.3 miniprot gene 171233 172168 1600 + . gene_id "MPG000167"; +NC_000962.3 miniprot transcript 171233 172168 1600 + . transcript_id "MPT000167"; gene_id "MPG000167"; +NC_000962.3 miniprot exon 171233 172168 1600 + . transcript_id "MPT000167"; gene_id "MPG000167"; +NC_000962.3 miniprot CDS 171233 172165 1600 + 0 transcript_id "MPT000167"; gene_id "MPG000167"; +NC_000962.3 miniprot gene 684410 685132 1190 + . gene_id "MPG000168"; +NC_000962.3 miniprot transcript 684410 685132 1190 + . transcript_id "MPT000168"; gene_id "MPG000168"; +NC_000962.3 miniprot exon 684410 685132 1190 + . transcript_id "MPT000168"; gene_id "MPG000168"; +NC_000962.3 miniprot CDS 684410 685129 1190 + 0 transcript_id "MPT000168"; gene_id "MPG000168"; +NC_000962.3 miniprot gene 273166 274164 412 + . gene_id "MPG000169"; +NC_000962.3 miniprot transcript 273166 274164 412 + . transcript_id "MPT000169"; gene_id "MPG000169"; +NC_000962.3 miniprot exon 273166 274164 412 + . transcript_id "MPT000169"; gene_id "MPG000169"; +NC_000962.3 miniprot CDS 273166 274164 412 + 0 transcript_id "MPT000169"; gene_id "MPG000169"; +NC_000962.3 miniprot gene 149533 363055 1850 + . gene_id "MPG000170"; +NC_000962.3 miniprot transcript 149533 363055 1850 + . transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot exon 149533 150822 1178 + . transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot CDS 149533 150822 1178 + 0 transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot exon 361718 361846 81 + . transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot CDS 361718 361846 81 + 0 transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot exon 362171 363055 591 + . transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot CDS 362171 363055 591 + 0 transcript_id "MPT000170"; gene_id "MPG000170"; +NC_000962.3 miniprot gene 87798 88004 337 - . gene_id "MPG000171"; +NC_000962.3 miniprot transcript 87798 88004 337 - . transcript_id "MPT000171"; gene_id "MPG000171"; +NC_000962.3 miniprot exon 87798 88004 337 - . transcript_id "MPT000171"; gene_id "MPG000171"; +NC_000962.3 miniprot CDS 87801 88004 337 - 0 transcript_id "MPT000171"; gene_id "MPG000171"; +NC_000962.3 miniprot gene 390580 391251 1162 - . gene_id "MPG000172"; +NC_000962.3 miniprot transcript 390580 391251 1162 - . transcript_id "MPT000172"; gene_id "MPG000172"; +NC_000962.3 miniprot exon 390580 391251 1162 - . transcript_id "MPT000172"; gene_id "MPG000172"; +NC_000962.3 miniprot CDS 390583 391251 1162 - 0 transcript_id "MPT000172"; gene_id "MPG000172"; +NC_000962.3 miniprot gene 382879 383541 1141 - . gene_id "MPG000173"; +NC_000962.3 miniprot transcript 382879 383541 1141 - . transcript_id "MPT000173"; gene_id "MPG000173"; +NC_000962.3 miniprot exon 382879 383541 1141 - . transcript_id "MPT000173"; gene_id "MPG000173"; +NC_000962.3 miniprot CDS 382882 383541 1141 - 0 transcript_id "MPT000173"; gene_id "MPG000173"; +NC_000962.3 miniprot gene 387888 388550 1131 + . gene_id "MPG000174"; +NC_000962.3 miniprot transcript 387888 388550 1131 + . transcript_id "MPT000174"; gene_id "MPG000174"; +NC_000962.3 miniprot exon 387888 388550 1131 + . transcript_id "MPT000174"; gene_id "MPG000174"; +NC_000962.3 miniprot CDS 387888 388547 1131 + 0 transcript_id "MPT000174"; gene_id "MPG000174"; +NC_000962.3 miniprot gene 394694 395320 1080 - . gene_id "MPG000175"; +NC_000962.3 miniprot transcript 394694 395320 1080 - . transcript_id "MPT000175"; gene_id "MPG000175"; +NC_000962.3 miniprot exon 394694 395320 1080 - . transcript_id "MPT000175"; gene_id "MPG000175"; +NC_000962.3 miniprot CDS 394697 395320 1080 - 0 transcript_id "MPT000175"; gene_id "MPG000175"; +NC_000962.3 miniprot gene 210892 212250 2253 - . gene_id "MPG000176"; +NC_000962.3 miniprot transcript 210892 212250 2253 - . transcript_id "MPT000176"; gene_id "MPG000176"; +NC_000962.3 miniprot exon 210892 212250 2253 - . transcript_id "MPT000176"; gene_id "MPG000176"; +NC_000962.3 miniprot CDS 210895 212250 2253 - 0 transcript_id "MPT000176"; gene_id "MPG000176"; +NC_000962.3 miniprot gene 606551 608062 2661 + . gene_id "MPG000177"; +NC_000962.3 miniprot transcript 606551 608062 2661 + . transcript_id "MPT000177"; gene_id "MPG000177"; +NC_000962.3 miniprot exon 606551 608062 2661 + . transcript_id "MPT000177"; gene_id "MPG000177"; +NC_000962.3 miniprot CDS 606551 608059 2661 + 0 transcript_id "MPT000177"; gene_id "MPG000177"; +NC_000962.3 miniprot gene 400192 401703 2651 + . gene_id "MPG000178"; +NC_000962.3 miniprot transcript 400192 401703 2651 + . transcript_id "MPT000178"; gene_id "MPG000178"; +NC_000962.3 miniprot exon 400192 401703 2651 + . transcript_id "MPT000178"; gene_id "MPG000178"; +NC_000962.3 miniprot CDS 400192 401700 2651 + 0 transcript_id "MPT000178"; gene_id "MPG000178"; +NC_000962.3 miniprot gene 196891 197652 836 + . gene_id "MPG000179"; +NC_000962.3 miniprot transcript 196891 197652 836 + . transcript_id "MPT000179"; gene_id "MPG000179"; +NC_000962.3 miniprot exon 196891 197652 836 + . transcript_id "MPT000179"; gene_id "MPG000179"; +NC_000962.3 miniprot CDS 196891 197652 836 + 0 transcript_id "MPT000179"; gene_id "MPG000179"; +NC_000962.3 miniprot gene 449404 451803 4180 - . gene_id "MPG000180"; +NC_000962.3 miniprot transcript 449404 451803 4180 - . transcript_id "MPT000180"; gene_id "MPG000180"; +NC_000962.3 miniprot exon 449404 451803 4180 - . transcript_id "MPT000180"; gene_id "MPG000180"; +NC_000962.3 miniprot CDS 449407 451803 4180 - 0 transcript_id "MPT000180"; gene_id "MPG000180"; +NC_000962.3 miniprot gene 542142 542852 1185 + . gene_id "MPG000181"; +NC_000962.3 miniprot transcript 542142 542852 1185 + . transcript_id "MPT000181"; gene_id "MPG000181"; +NC_000962.3 miniprot exon 542142 542852 1185 + . transcript_id "MPT000181"; gene_id "MPG000181"; +NC_000962.3 miniprot CDS 542142 542849 1185 + 0 transcript_id "MPT000181"; gene_id "MPG000181"; +NC_000962.3 miniprot gene 483968 485725 1207 + . gene_id "MPG000182"; +NC_000962.3 miniprot transcript 483968 485725 1207 + . transcript_id "MPT000182"; gene_id "MPG000182"; +NC_000962.3 miniprot exon 483968 485725 1207 + . transcript_id "MPT000182"; gene_id "MPG000182"; +NC_000962.3 miniprot CDS 483968 485725 1207 + 0 transcript_id "MPT000182"; gene_id "MPG000182"; +NC_000962.3 miniprot gene 547038 547357 311 - . gene_id "MPG000183"; +NC_000962.3 miniprot transcript 547038 547357 311 - . transcript_id "MPT000183"; gene_id "MPG000183"; +NC_000962.3 miniprot exon 547038 547357 311 - . transcript_id "MPT000183"; gene_id "MPG000183"; +NC_000962.3 miniprot CDS 547038 547357 311 - 0 transcript_id "MPT000183"; gene_id "MPG000183"; +NC_000962.3 miniprot gene 53237 55699 4284 + . gene_id "MPG000184"; +NC_000962.3 miniprot transcript 53237 55699 4284 + . transcript_id "MPT000184"; gene_id "MPG000184"; +NC_000962.3 miniprot exon 53237 55699 4284 + . transcript_id "MPT000184"; gene_id "MPG000184"; +NC_000962.3 miniprot CDS 53237 55696 4284 + 0 transcript_id "MPT000184"; gene_id "MPG000184"; +NC_000962.3 miniprot gene 478566 479753 2057 - . gene_id "MPG000185"; +NC_000962.3 miniprot transcript 478566 479753 2057 - . transcript_id "MPT000185"; gene_id "MPG000185"; +NC_000962.3 miniprot exon 478566 479753 2057 - . transcript_id "MPT000185"; gene_id "MPG000185"; +NC_000962.3 miniprot CDS 478569 479753 2057 - 0 transcript_id "MPT000185"; gene_id "MPG000185"; +NC_000962.3 miniprot gene 58586 59080 843 + . gene_id "MPG000186"; +NC_000962.3 miniprot transcript 58586 59080 843 + . transcript_id "MPT000186"; gene_id "MPG000186"; +NC_000962.3 miniprot exon 58586 59080 843 + . transcript_id "MPT000186"; gene_id "MPG000186"; +NC_000962.3 miniprot CDS 58586 59077 843 + 0 transcript_id "MPT000186"; gene_id "MPG000186"; +NC_000962.3 miniprot gene 466804 468004 513 - . gene_id "MPG000187"; +NC_000962.3 miniprot transcript 466804 468004 513 - . transcript_id "MPT000187"; gene_id "MPG000187"; +NC_000962.3 miniprot exon 466804 468004 513 - . transcript_id "MPT000187"; gene_id "MPG000187"; +NC_000962.3 miniprot CDS 466804 468004 513 - 0 transcript_id "MPT000187"; gene_id "MPG000187"; +NC_000962.3 miniprot gene 349624 349914 323 + . gene_id "MPG000188"; +NC_000962.3 miniprot transcript 349624 349914 323 + . transcript_id "MPT000188"; gene_id "MPG000188"; +NC_000962.3 miniprot exon 349624 349914 323 + . transcript_id "MPT000188"; gene_id "MPG000188"; +NC_000962.3 miniprot CDS 349624 349914 323 + 0 transcript_id "MPT000188"; gene_id "MPG000188"; +NC_000962.3 miniprot gene 289104 289337 407 + . gene_id "MPG000189"; +NC_000962.3 miniprot transcript 289104 289337 407 + . transcript_id "MPT000189"; gene_id "MPG000189"; +NC_000962.3 miniprot exon 289104 289337 407 + . transcript_id "MPT000189"; gene_id "MPG000189"; +NC_000962.3 miniprot CDS 289104 289334 407 + 0 transcript_id "MPT000189"; gene_id "MPG000189"; +NC_000962.3 miniprot gene 352149 353036 1531 + . gene_id "MPG000190"; +NC_000962.3 miniprot transcript 352149 353036 1531 + . transcript_id "MPT000190"; gene_id "MPG000190"; +NC_000962.3 miniprot exon 352149 353036 1531 + . transcript_id "MPT000190"; gene_id "MPG000190"; +NC_000962.3 miniprot CDS 352149 353033 1531 + 0 transcript_id "MPT000190"; gene_id "MPG000190"; +NC_000962.3 miniprot gene 279605 280978 2337 - . gene_id "MPG000191"; +NC_000962.3 miniprot transcript 279605 280978 2337 - . transcript_id "MPT000191"; gene_id "MPG000191"; +NC_000962.3 miniprot exon 279605 280978 2337 - . transcript_id "MPT000191"; gene_id "MPG000191"; +NC_000962.3 miniprot CDS 279608 280978 2337 - 0 transcript_id "MPT000191"; gene_id "MPG000191"; +NC_000962.3 miniprot gene 372820 375711 5124 - . gene_id "MPG000192"; +NC_000962.3 miniprot transcript 372820 375711 5124 - . transcript_id "MPT000192"; gene_id "MPG000192"; +NC_000962.3 miniprot exon 372820 375711 5124 - . transcript_id "MPT000192"; gene_id "MPG000192"; +NC_000962.3 miniprot CDS 372823 375711 5124 - 0 transcript_id "MPT000192"; gene_id "MPG000192"; +NC_000962.3 miniprot gene 334796 339073 1580 - . gene_id "MPG000193"; +NC_000962.3 miniprot transcript 334796 339073 1580 - . transcript_id "MPT000193"; gene_id "MPG000193"; +NC_000962.3 miniprot exon 338344 339073 773 - . transcript_id "MPT000193"; gene_id "MPG000193"; +NC_000962.3 miniprot CDS 338344 339073 773 - 0 transcript_id "MPT000193"; gene_id "MPG000193"; +NC_000962.3 miniprot exon 334796 335676 807 - . transcript_id "MPT000193"; gene_id "MPG000193"; +NC_000962.3 miniprot CDS 334796 335676 807 - 2 transcript_id "MPT000193"; gene_id "MPG000193"; +NC_000962.3 miniprot gene 630996 675916 3510 - . gene_id "MPG000194"; +NC_000962.3 miniprot transcript 630996 675916 3510 - . transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot exon 671941 675916 3344 - . transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot CDS 671941 675916 3344 - 0 transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot exon 633472 633957 81 - . transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot CDS 633472 633957 81 - 2 transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot exon 630996 631471 85 - . transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot CDS 630996 631471 85 - 2 transcript_id "MPT000194"; gene_id "MPG000194"; +NC_000962.3 miniprot gene 672146 675916 1237 - . gene_id "MPG000195"; +NC_000962.3 miniprot transcript 672146 675916 1237 - . transcript_id "MPT000195"; gene_id "MPG000195"; +NC_000962.3 miniprot exon 675276 675916 618 - . transcript_id "MPT000195"; gene_id "MPG000195"; +NC_000962.3 miniprot CDS 675276 675916 618 - 0 transcript_id "MPT000195"; gene_id "MPG000195"; +NC_000962.3 miniprot exon 672146 673085 619 - . transcript_id "MPT000195"; gene_id "MPG000195"; +NC_000962.3 miniprot CDS 672146 673085 619 - 1 transcript_id "MPT000195"; gene_id "MPG000195"; +NC_000962.3 miniprot gene 205231 223962 793 + . gene_id "MPG000196"; +NC_000962.3 miniprot transcript 205231 223962 793 + . transcript_id "MPT000196"; gene_id "MPG000196"; +NC_000962.3 miniprot exon 205231 206593 708 + . transcript_id "MPT000196"; gene_id "MPG000196"; +NC_000962.3 miniprot CDS 205231 206593 708 + 0 transcript_id "MPT000196"; gene_id "MPG000196"; +NC_000962.3 miniprot exon 223766 223962 85 + . transcript_id "MPT000196"; gene_id "MPG000196"; +NC_000962.3 miniprot CDS 223766 223962 85 + 2 transcript_id "MPT000196"; gene_id "MPG000196"; +NC_000962.3 miniprot gene 443067 444197 1971 - . gene_id "MPG000197"; +NC_000962.3 miniprot transcript 443067 444197 1971 - . transcript_id "MPT000197"; gene_id "MPG000197"; +NC_000962.3 miniprot exon 443067 444197 1971 - . transcript_id "MPT000197"; gene_id "MPG000197"; +NC_000962.3 miniprot CDS 443070 444197 1971 - 0 transcript_id "MPT000197"; gene_id "MPG000197"; +NC_000962.3 miniprot gene 633055 634404 2327 - . gene_id "MPG000198"; +NC_000962.3 miniprot transcript 633055 634404 2327 - . transcript_id "MPT000198"; gene_id "MPG000198"; +NC_000962.3 miniprot exon 633055 634404 2327 - . transcript_id "MPT000198"; gene_id "MPG000198"; +NC_000962.3 miniprot CDS 633058 634404 2327 - 0 transcript_id "MPT000198"; gene_id "MPG000198"; +NC_000962.3 miniprot gene 408634 409173 945 + . gene_id "MPG000199"; +NC_000962.3 miniprot transcript 408634 409173 945 + . transcript_id "MPT000199"; gene_id "MPG000199"; +NC_000962.3 miniprot exon 408634 409173 945 + . transcript_id "MPT000199"; gene_id "MPG000199"; +NC_000962.3 miniprot CDS 408634 409170 945 + 0 transcript_id "MPT000199"; gene_id "MPG000199"; +NC_000962.3 miniprot gene 67796 68359 530 + . gene_id "MPG000200"; +NC_000962.3 miniprot transcript 67796 68359 530 + . transcript_id "MPT000200"; gene_id "MPG000200"; +NC_000962.3 miniprot exon 67796 68359 530 + . transcript_id "MPT000200"; gene_id "MPG000200"; +NC_000962.3 miniprot CDS 67796 68359 530 + 0 transcript_id "MPT000200"; gene_id "MPG000200"; +NC_000962.3 miniprot gene 299076 300797 799 - . gene_id "MPG000201"; +NC_000962.3 miniprot transcript 299076 300797 799 - . transcript_id "MPT000201"; gene_id "MPG000201"; +NC_000962.3 miniprot exon 299076 300797 799 - . transcript_id "MPT000201"; gene_id "MPG000201"; +NC_000962.3 miniprot CDS 299076 300797 799 - 0 transcript_id "MPT000201"; gene_id "MPG000201"; +NC_000962.3 miniprot gene 86528 87133 993 + . gene_id "MPG000202"; +NC_000962.3 miniprot transcript 86528 87133 993 + . transcript_id "MPT000202"; gene_id "MPG000202"; +NC_000962.3 miniprot exon 86528 87133 993 + . transcript_id "MPT000202"; gene_id "MPG000202"; +NC_000962.3 miniprot CDS 86528 87130 993 + 0 transcript_id "MPT000202"; gene_id "MPG000202"; +NC_000962.3 miniprot gene 230899 231534 1050 + . gene_id "MPG000203"; +NC_000962.3 miniprot transcript 230899 231534 1050 + . transcript_id "MPT000203"; gene_id "MPG000203"; +NC_000962.3 miniprot exon 230899 231534 1050 + . transcript_id "MPT000203"; gene_id "MPG000203"; +NC_000962.3 miniprot CDS 230899 231531 1050 + 0 transcript_id "MPT000203"; gene_id "MPG000203"; +NC_000962.3 miniprot gene 518733 519041 508 + . gene_id "MPG000204"; +NC_000962.3 miniprot transcript 518733 519041 508 + . transcript_id "MPT000204"; gene_id "MPG000204"; +NC_000962.3 miniprot exon 518733 519041 508 + . transcript_id "MPT000204"; gene_id "MPG000204"; +NC_000962.3 miniprot CDS 518733 519038 508 + 0 transcript_id "MPT000204"; gene_id "MPG000204"; +NC_000962.3 miniprot gene 254637 255950 2241 - . gene_id "MPG000205"; +NC_000962.3 miniprot transcript 254637 255950 2241 - . transcript_id "MPT000205"; gene_id "MPG000205"; +NC_000962.3 miniprot exon 254637 255950 2241 - . transcript_id "MPT000205"; gene_id "MPG000205"; +NC_000962.3 miniprot CDS 254640 255950 2241 - 0 transcript_id "MPT000205"; gene_id "MPG000205"; +NC_000962.3 miniprot gene 160869 161474 1078 + . gene_id "MPG000206"; +NC_000962.3 miniprot transcript 160869 161474 1078 + . transcript_id "MPT000206"; gene_id "MPG000206"; +NC_000962.3 miniprot exon 160869 161474 1078 + . transcript_id "MPT000206"; gene_id "MPG000206"; +NC_000962.3 miniprot CDS 160869 161471 1078 + 0 transcript_id "MPT000206"; gene_id "MPG000206"; +NC_000962.3 miniprot gene 77619 78896 2184 - . gene_id "MPG000207"; +NC_000962.3 miniprot transcript 77619 78896 2184 - . transcript_id "MPT000207"; gene_id "MPG000207"; +NC_000962.3 miniprot exon 77619 78896 2184 - . transcript_id "MPT000207"; gene_id "MPG000207"; +NC_000962.3 miniprot CDS 77622 78896 2184 - 0 transcript_id "MPT000207"; gene_id "MPG000207"; +NC_000962.3 miniprot gene 586346 587380 1700 + . gene_id "MPG000208"; +NC_000962.3 miniprot transcript 586346 587380 1700 + . transcript_id "MPT000208"; gene_id "MPG000208"; +NC_000962.3 miniprot exon 586346 587380 1700 + . transcript_id "MPT000208"; gene_id "MPG000208"; +NC_000962.3 miniprot CDS 586346 587377 1700 + 0 transcript_id "MPT000208"; gene_id "MPG000208"; +NC_000962.3 miniprot gene 467014 467998 553 - . gene_id "MPG000209"; +NC_000962.3 miniprot transcript 467014 467998 553 - . transcript_id "MPT000209"; gene_id "MPG000209"; +NC_000962.3 miniprot exon 467014 467998 553 - . transcript_id "MPT000209"; gene_id "MPG000209"; +NC_000962.3 miniprot CDS 467014 467998 553 - 0 transcript_id "MPT000209"; gene_id "MPG000209"; +NC_000962.3 miniprot gene 589183 590058 1532 + . gene_id "MPG000210"; +NC_000962.3 miniprot transcript 589183 590058 1532 + . transcript_id "MPT000210"; gene_id "MPG000210"; +NC_000962.3 miniprot exon 589183 590058 1532 + . transcript_id "MPT000210"; gene_id "MPG000210"; +NC_000962.3 miniprot CDS 589183 590055 1532 + 0 transcript_id "MPT000210"; gene_id "MPG000210"; +NC_000962.3 miniprot gene 104434 105101 1061 - . gene_id "MPG000211"; +NC_000962.3 miniprot transcript 104434 105101 1061 - . transcript_id "MPT000211"; gene_id "MPG000211"; +NC_000962.3 miniprot exon 104434 105101 1061 - . transcript_id "MPT000211"; gene_id "MPG000211"; +NC_000962.3 miniprot CDS 104437 105101 1061 - 0 transcript_id "MPT000211"; gene_id "MPG000211"; +NC_000962.3 miniprot gene 29722 31068 2278 + . gene_id "MPG000212"; +NC_000962.3 miniprot transcript 29722 31068 2278 + . transcript_id "MPT000212"; gene_id "MPG000212"; +NC_000962.3 miniprot exon 29722 31068 2278 + . transcript_id "MPT000212"; gene_id "MPG000212"; +NC_000962.3 miniprot CDS 29722 31065 2278 + 0 transcript_id "MPT000212"; gene_id "MPG000212"; +NC_000962.3 miniprot gene 575348 576790 2465 + . gene_id "MPG000213"; +NC_000962.3 miniprot transcript 575348 576790 2465 + . transcript_id "MPT000213"; gene_id "MPG000213"; +NC_000962.3 miniprot exon 575348 576790 2465 + . transcript_id "MPT000213"; gene_id "MPG000213"; +NC_000962.3 miniprot CDS 575348 576787 2465 + 0 transcript_id "MPT000213"; gene_id "MPG000213"; +NC_000962.3 miniprot gene 656034 657443 1205 - . gene_id "MPG000214"; +NC_000962.3 miniprot transcript 656034 657443 1205 - . transcript_id "MPT000214"; gene_id "MPG000214"; +NC_000962.3 miniprot exon 656034 657443 1205 - . transcript_id "MPT000214"; gene_id "MPG000214"; +NC_000962.3 miniprot CDS 656034 657443 1205 - 0 transcript_id "MPT000214"; gene_id "MPG000214"; +NC_000962.3 miniprot gene 124374 125570 2102 + . gene_id "MPG000215"; +NC_000962.3 miniprot transcript 124374 125570 2102 + . transcript_id "MPT000215"; gene_id "MPG000215"; +NC_000962.3 miniprot exon 124374 125570 2102 + . transcript_id "MPT000215"; gene_id "MPG000215"; +NC_000962.3 miniprot CDS 124374 125567 2102 + 0 transcript_id "MPT000215"; gene_id "MPG000215"; +NC_000962.3 miniprot gene 485734 488694 1823 + . gene_id "MPG000216"; +NC_000962.3 miniprot transcript 485734 488694 1823 + . transcript_id "MPT000216"; gene_id "MPG000216"; +NC_000962.3 miniprot exon 485734 488694 1823 + . transcript_id "MPT000216"; gene_id "MPG000216"; +NC_000962.3 miniprot CDS 485734 488694 1823 + 0 transcript_id "MPT000216"; gene_id "MPG000216"; +NC_000962.3 miniprot gene 580366 675916 3264 - . gene_id "MPG000217"; +NC_000962.3 miniprot transcript 580366 675916 3264 - . transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot exon 671941 675916 3110 - . transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot CDS 671941 675916 3110 - 0 transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot exon 633472 633780 82 - . transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot CDS 633472 633780 82 - 2 transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot exon 625909 625954 43 - . transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot CDS 625909 625954 43 - 2 transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot exon 580366 580408 29 - . transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot CDS 580366 580408 29 - 1 transcript_id "MPT000217"; gene_id "MPG000217"; +NC_000962.3 miniprot gene 333619 339073 2988 - . gene_id "MPG000218"; +NC_000962.3 miniprot transcript 333619 339073 2988 - . transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot exon 337762 339073 1074 - . transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot CDS 337762 339073 1074 - 0 transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot exon 336674 337440 511 - . transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot CDS 336674 337440 511 - 2 transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot exon 333619 335896 1403 - . transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot CDS 333619 335896 1403 - 0 transcript_id "MPT000218"; gene_id "MPG000218"; +NC_000962.3 miniprot gene 371181 434679 1714 - . gene_id "MPG000219"; +NC_000962.3 miniprot transcript 371181 434679 1714 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 433957 434679 602 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 433957 434679 602 - 0 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 431330 431589 220 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 431330 431589 220 - 0 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 426138 426718 426 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 426138 426718 426 - 1 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 424735 425242 139 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 424735 425242 139 - 2 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 374563 374941 48 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 374563 374941 48 - 1 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 372838 373092 44 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 372838 373092 44 - 1 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot exon 371181 371499 235 - . transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot CDS 371181 371499 235 - 1 transcript_id "MPT000219"; gene_id "MPG000219"; +NC_000962.3 miniprot gene 274306 274719 684 - . gene_id "MPG000220"; +NC_000962.3 miniprot transcript 274306 274719 684 - . transcript_id "MPT000220"; gene_id "MPG000220"; +NC_000962.3 miniprot exon 274306 274719 684 - . transcript_id "MPT000220"; gene_id "MPG000220"; +NC_000962.3 miniprot CDS 274309 274719 684 - 0 transcript_id "MPT000220"; gene_id "MPG000220"; +NC_000962.3 miniprot gene 695674 696294 526 - . gene_id "MPG000221"; +NC_000962.3 miniprot transcript 695674 696294 526 - . transcript_id "MPT000221"; gene_id "MPG000221"; +NC_000962.3 miniprot exon 695674 696294 526 - . transcript_id "MPT000221"; gene_id "MPG000221"; +NC_000962.3 miniprot CDS 695674 696294 526 - 0 transcript_id "MPT000221"; gene_id "MPG000221"; +NC_000962.3 miniprot gene 385173 385967 1356 - . gene_id "MPG000222"; +NC_000962.3 miniprot transcript 385173 385967 1356 - . transcript_id "MPT000222"; gene_id "MPG000222"; +NC_000962.3 miniprot exon 385173 385967 1356 - . transcript_id "MPT000222"; gene_id "MPG000222"; +NC_000962.3 miniprot CDS 385176 385967 1356 - 0 transcript_id "MPT000222"; gene_id "MPG000222"; +NC_000962.3 miniprot gene 293798 295633 1996 - . gene_id "MPG000223"; +NC_000962.3 miniprot transcript 293798 295633 1996 - . transcript_id "MPT000223"; gene_id "MPG000223"; +NC_000962.3 miniprot exon 293798 295633 1996 - . transcript_id "MPT000223"; gene_id "MPG000223"; +NC_000962.3 miniprot CDS 293801 295633 1996 - 0 transcript_id "MPT000223"; gene_id "MPG000223"; +NC_000962.3 miniprot gene 484031 485695 759 + . gene_id "MPG000224"; +NC_000962.3 miniprot transcript 484031 485695 759 + . transcript_id "MPT000224"; gene_id "MPG000224"; +NC_000962.3 miniprot exon 484031 485695 759 + . transcript_id "MPT000224"; gene_id "MPG000224"; +NC_000962.3 miniprot CDS 484031 485695 759 + 0 transcript_id "MPT000224"; gene_id "MPG000224"; +NC_000962.3 miniprot gene 296809 298119 2148 + . gene_id "MPG000225"; +NC_000962.3 miniprot transcript 296809 298119 2148 + . transcript_id "MPT000225"; gene_id "MPG000225"; +NC_000962.3 miniprot exon 296809 298119 2148 + . transcript_id "MPT000225"; gene_id "MPG000225"; +NC_000962.3 miniprot CDS 296809 298116 2148 + 0 transcript_id "MPT000225"; gene_id "MPG000225"; +NC_000962.3 miniprot gene 300834 301655 1507 - . gene_id "MPG000226"; +NC_000962.3 miniprot transcript 300834 301655 1507 - . transcript_id "MPT000226"; gene_id "MPG000226"; +NC_000962.3 miniprot exon 300834 301655 1507 - . transcript_id "MPT000226"; gene_id "MPG000226"; +NC_000962.3 miniprot CDS 300837 301655 1507 - 0 transcript_id "MPT000226"; gene_id "MPG000226"; +NC_000962.3 miniprot gene 453230 454372 1939 - . gene_id "MPG000227"; +NC_000962.3 miniprot transcript 453230 454372 1939 - . transcript_id "MPT000227"; gene_id "MPG000227"; +NC_000962.3 miniprot exon 453230 454372 1939 - . transcript_id "MPT000227"; gene_id "MPG000227"; +NC_000962.3 miniprot CDS 453233 454372 1939 - 0 transcript_id "MPT000227"; gene_id "MPG000227"; +NC_000962.3 miniprot gene 527379 528314 1610 - . gene_id "MPG000228"; +NC_000962.3 miniprot transcript 527379 528314 1610 - . transcript_id "MPT000228"; gene_id "MPG000228"; +NC_000962.3 miniprot exon 527379 528314 1610 - . transcript_id "MPT000228"; gene_id "MPG000228"; +NC_000962.3 miniprot CDS 527382 528314 1610 - 0 transcript_id "MPT000228"; gene_id "MPG000228"; +NC_000962.3 miniprot gene 656010 657470 2596 - . gene_id "MPG000229"; +NC_000962.3 miniprot transcript 656010 657470 2596 - . transcript_id "MPT000229"; gene_id "MPG000229"; +NC_000962.3 miniprot exon 656010 657470 2596 - . transcript_id "MPT000229"; gene_id "MPG000229"; +NC_000962.3 miniprot CDS 656013 657470 2596 - 0 transcript_id "MPT000229"; gene_id "MPG000229"; +NC_000962.3 miniprot gene 329705 330325 1058 - . gene_id "MPG000230"; +NC_000962.3 miniprot transcript 329705 330325 1058 - . transcript_id "MPT000230"; gene_id "MPG000230"; +NC_000962.3 miniprot exon 329705 330325 1058 - . transcript_id "MPT000230"; gene_id "MPG000230"; +NC_000962.3 miniprot CDS 329708 330325 1058 - 0 transcript_id "MPT000230"; gene_id "MPG000230"; +NC_000962.3 miniprot gene 321331 322722 2402 + . gene_id "MPG000231"; +NC_000962.3 miniprot transcript 321331 322722 2402 + . transcript_id "MPT000231"; gene_id "MPG000231"; +NC_000962.3 miniprot exon 321331 322722 2402 + . transcript_id "MPT000231"; gene_id "MPG000231"; +NC_000962.3 miniprot CDS 321331 322719 2402 + 0 transcript_id "MPT000231"; gene_id "MPG000231"; +NC_000962.3 miniprot gene 498300 499619 2167 - . gene_id "MPG000232"; +NC_000962.3 miniprot transcript 498300 499619 2167 - . transcript_id "MPT000232"; gene_id "MPG000232"; +NC_000962.3 miniprot exon 498300 499619 2167 - . transcript_id "MPT000232"; gene_id "MPG000232"; +NC_000962.3 miniprot CDS 498303 499619 2167 - 0 transcript_id "MPT000232"; gene_id "MPG000232"; +NC_000962.3 miniprot gene 519073 519567 799 + . gene_id "MPG000233"; +NC_000962.3 miniprot transcript 519073 519567 799 + . transcript_id "MPT000233"; gene_id "MPG000233"; +NC_000962.3 miniprot exon 519073 519567 799 + . transcript_id "MPT000233"; gene_id "MPG000233"; +NC_000962.3 miniprot CDS 519073 519564 799 + 0 transcript_id "MPT000233"; gene_id "MPG000233"; +NC_000962.3 miniprot gene 260924 262252 2302 + . gene_id "MPG000234"; +NC_000962.3 miniprot transcript 260924 262252 2302 + . transcript_id "MPT000234"; gene_id "MPG000234"; +NC_000962.3 miniprot exon 260924 262252 2302 + . transcript_id "MPT000234"; gene_id "MPG000234"; +NC_000962.3 miniprot CDS 260924 262249 2302 + 0 transcript_id "MPT000234"; gene_id "MPG000234"; +NC_000962.3 miniprot gene 59122 59376 426 + . gene_id "MPG000235"; +NC_000962.3 miniprot transcript 59122 59376 426 + . transcript_id "MPT000235"; gene_id "MPG000235"; +NC_000962.3 miniprot exon 59122 59376 426 + . transcript_id "MPT000235"; gene_id "MPG000235"; +NC_000962.3 miniprot CDS 59122 59373 426 + 0 transcript_id "MPT000235"; gene_id "MPG000235"; +NC_000962.3 miniprot gene 123980 124264 482 - . gene_id "MPG000236"; +NC_000962.3 miniprot transcript 123980 124264 482 - . transcript_id "MPT000236"; gene_id "MPG000236"; +NC_000962.3 miniprot exon 123980 124264 482 - . transcript_id "MPT000236"; gene_id "MPG000236"; +NC_000962.3 miniprot CDS 123983 124264 482 - 0 transcript_id "MPT000236"; gene_id "MPG000236"; +NC_000962.3 miniprot gene 566097 566363 83 + . gene_id "MPG000237"; +NC_000962.3 miniprot transcript 566097 566363 83 + . transcript_id "MPT000237"; gene_id "MPG000237"; +NC_000962.3 miniprot exon 566097 566363 83 + . transcript_id "MPT000237"; gene_id "MPG000237"; +NC_000962.3 miniprot CDS 566097 566363 83 + 0 transcript_id "MPT000237"; gene_id "MPG000237"; +NC_000962.3 miniprot gene 339643 340962 499 + . gene_id "MPG000238"; +NC_000962.3 miniprot transcript 339643 340962 499 + . transcript_id "MPT000238"; gene_id "MPG000238"; +NC_000962.3 miniprot exon 339643 340522 324 + . transcript_id "MPT000238"; gene_id "MPG000238"; +NC_000962.3 miniprot CDS 339643 340522 324 + 0 transcript_id "MPT000238"; gene_id "MPG000238"; +NC_000962.3 miniprot exon 340769 340962 175 + . transcript_id "MPT000238"; gene_id "MPG000238"; +NC_000962.3 miniprot CDS 340769 340962 175 + 2 transcript_id "MPT000238"; gene_id "MPG000238"; +NC_000962.3 miniprot gene 333508 339073 1299 - . gene_id "MPG000239"; +NC_000962.3 miniprot transcript 333508 339073 1299 - . transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot exon 338212 339073 777 - . transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot CDS 338212 339073 777 - 0 transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot exon 334856 335205 243 - . transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot CDS 334856 335205 243 - 2 transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot exon 333508 333838 279 - . transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot CDS 333508 333838 279 - 0 transcript_id "MPT000239"; gene_id "MPG000239"; +NC_000962.3 miniprot gene 592791 593867 1842 + . gene_id "MPG000240"; +NC_000962.3 miniprot transcript 592791 593867 1842 + . transcript_id "MPT000240"; gene_id "MPG000240"; +NC_000962.3 miniprot exon 592791 593867 1842 + . transcript_id "MPT000240"; gene_id "MPG000240"; +NC_000962.3 miniprot CDS 592791 593864 1842 + 0 transcript_id "MPT000240"; gene_id "MPG000240"; +NC_000962.3 miniprot gene 567921 568967 1780 - . gene_id "MPG000241"; +NC_000962.3 miniprot transcript 567921 568967 1780 - . transcript_id "MPT000241"; gene_id "MPG000241"; +NC_000962.3 miniprot exon 567921 568967 1780 - . transcript_id "MPT000241"; gene_id "MPG000241"; +NC_000962.3 miniprot CDS 567924 568967 1780 - 0 transcript_id "MPT000241"; gene_id "MPG000241"; +NC_000962.3 miniprot gene 59896 60417 908 + . gene_id "MPG000242"; +NC_000962.3 miniprot transcript 59896 60417 908 + . transcript_id "MPT000242"; gene_id "MPG000242"; +NC_000962.3 miniprot exon 59896 60417 908 + . transcript_id "MPT000242"; gene_id "MPG000242"; +NC_000962.3 miniprot CDS 59896 60414 908 + 0 transcript_id "MPT000242"; gene_id "MPG000242"; +NC_000962.3 miniprot gene 47366 48100 1267 - . gene_id "MPG000243"; +NC_000962.3 miniprot transcript 47366 48100 1267 - . transcript_id "MPT000243"; gene_id "MPG000243"; +NC_000962.3 miniprot exon 47366 48100 1267 - . transcript_id "MPT000243"; gene_id "MPG000243"; +NC_000962.3 miniprot CDS 47369 48100 1267 - 0 transcript_id "MPT000243"; gene_id "MPG000243"; +NC_000962.3 miniprot gene 137941 138513 1009 + . gene_id "MPG000244"; +NC_000962.3 miniprot transcript 137941 138513 1009 + . transcript_id "MPT000244"; gene_id "MPG000244"; +NC_000962.3 miniprot exon 137941 138513 1009 + . transcript_id "MPT000244"; gene_id "MPG000244"; +NC_000962.3 miniprot CDS 137941 138510 1009 + 0 transcript_id "MPT000244"; gene_id "MPG000244"; +NC_000962.3 miniprot gene 483977 485725 1223 + . gene_id "MPG000245"; +NC_000962.3 miniprot transcript 483977 485725 1223 + . transcript_id "MPT000245"; gene_id "MPG000245"; +NC_000962.3 miniprot exon 483977 485725 1223 + . transcript_id "MPT000245"; gene_id "MPG000245"; +NC_000962.3 miniprot CDS 483977 485725 1223 + 0 transcript_id "MPT000245"; gene_id "MPG000245"; +NC_000962.3 miniprot gene 156578 157600 1840 - . gene_id "MPG000246"; +NC_000962.3 miniprot transcript 156578 157600 1840 - . transcript_id "MPT000246"; gene_id "MPG000246"; +NC_000962.3 miniprot exon 156578 157600 1840 - . transcript_id "MPT000246"; gene_id "MPG000246"; +NC_000962.3 miniprot CDS 156581 157600 1840 - 0 transcript_id "MPT000246"; gene_id "MPG000246"; +NC_000962.3 miniprot gene 65552 66694 2002 + . gene_id "MPG000247"; +NC_000962.3 miniprot transcript 65552 66694 2002 + . transcript_id "MPT000247"; gene_id "MPG000247"; +NC_000962.3 miniprot exon 65552 66694 2002 + . transcript_id "MPT000247"; gene_id "MPG000247"; +NC_000962.3 miniprot CDS 65552 66691 2002 + 0 transcript_id "MPT000247"; gene_id "MPG000247"; +NC_000962.3 miniprot gene 552026 552550 923 + . gene_id "MPG000248"; +NC_000962.3 miniprot transcript 552026 552550 923 + . transcript_id "MPT000248"; gene_id "MPG000248"; +NC_000962.3 miniprot exon 552026 552550 923 + . transcript_id "MPT000248"; gene_id "MPG000248"; +NC_000962.3 miniprot CDS 552026 552547 923 + 0 transcript_id "MPT000248"; gene_id "MPG000248"; +NC_000962.3 miniprot gene 89924 90403 823 + . gene_id "MPG000249"; +NC_000962.3 miniprot transcript 89924 90403 823 + . transcript_id "MPT000249"; gene_id "MPG000249"; +NC_000962.3 miniprot exon 89924 90403 823 + . transcript_id "MPT000249"; gene_id "MPG000249"; +NC_000962.3 miniprot CDS 89924 90400 823 + 0 transcript_id "MPT000249"; gene_id "MPG000249"; +NC_000962.3 miniprot gene 258913 259926 1769 + . gene_id "MPG000250"; +NC_000962.3 miniprot transcript 258913 259926 1769 + . transcript_id "MPT000250"; gene_id "MPG000250"; +NC_000962.3 miniprot exon 258913 259926 1769 + . transcript_id "MPT000250"; gene_id "MPG000250"; +NC_000962.3 miniprot CDS 258913 259923 1769 + 0 transcript_id "MPT000250"; gene_id "MPG000250"; +NC_000962.3 miniprot gene 148856 149224 601 + . gene_id "MPG000251"; +NC_000962.3 miniprot transcript 148856 149224 601 + . transcript_id "MPT000251"; gene_id "MPG000251"; +NC_000962.3 miniprot exon 148856 149224 601 + . transcript_id "MPT000251"; gene_id "MPG000251"; +NC_000962.3 miniprot CDS 148856 149221 601 + 0 transcript_id "MPT000251"; gene_id "MPG000251"; +NC_000962.3 miniprot gene 395347 396087 1232 - . gene_id "MPG000252"; +NC_000962.3 miniprot transcript 395347 396087 1232 - . transcript_id "MPT000252"; gene_id "MPG000252"; +NC_000962.3 miniprot exon 395347 396087 1232 - . transcript_id "MPT000252"; gene_id "MPG000252"; +NC_000962.3 miniprot CDS 395350 396087 1232 - 0 transcript_id "MPT000252"; gene_id "MPG000252"; +NC_000962.3 miniprot gene 456268 456819 951 - . gene_id "MPG000253"; +NC_000962.3 miniprot transcript 456268 456819 951 - . transcript_id "MPT000253"; gene_id "MPG000253"; +NC_000962.3 miniprot exon 456268 456819 951 - . transcript_id "MPT000253"; gene_id "MPG000253"; +NC_000962.3 miniprot CDS 456271 456819 951 - 0 transcript_id "MPT000253"; gene_id "MPG000253"; +NC_000962.3 miniprot gene 677922 678329 667 + . gene_id "MPG000254"; +NC_000962.3 miniprot transcript 677922 678329 667 + . transcript_id "MPT000254"; gene_id "MPG000254"; +NC_000962.3 miniprot exon 677922 678329 667 + . transcript_id "MPT000254"; gene_id "MPG000254"; +NC_000962.3 miniprot CDS 677922 678326 667 + 0 transcript_id "MPT000254"; gene_id "MPG000254"; +NC_000962.3 miniprot gene 71589 71828 381 + . gene_id "MPG000255"; +NC_000962.3 miniprot transcript 71589 71828 381 + . transcript_id "MPT000255"; gene_id "MPG000255"; +NC_000962.3 miniprot exon 71589 71828 381 + . transcript_id "MPT000255"; gene_id "MPG000255"; +NC_000962.3 miniprot CDS 71589 71825 381 + 0 transcript_id "MPT000255"; gene_id "MPG000255"; +NC_000962.3 miniprot gene 468335 469594 2107 + . gene_id "MPG000256"; +NC_000962.3 miniprot transcript 468335 469594 2107 + . transcript_id "MPT000256"; gene_id "MPG000256"; +NC_000962.3 miniprot exon 468335 469594 2107 + . transcript_id "MPT000256"; gene_id "MPG000256"; +NC_000962.3 miniprot CDS 468335 469591 2107 + 0 transcript_id "MPT000256"; gene_id "MPG000256"; +NC_000962.3 miniprot gene 505086 506582 2589 + . gene_id "MPG000257"; +NC_000962.3 miniprot transcript 505086 506582 2589 + . transcript_id "MPT000257"; gene_id "MPG000257"; +NC_000962.3 miniprot exon 505086 506582 2589 + . transcript_id "MPT000257"; gene_id "MPG000257"; +NC_000962.3 miniprot CDS 505086 506579 2589 + 0 transcript_id "MPT000257"; gene_id "MPG000257"; +NC_000962.3 miniprot gene 500350 501018 1129 - . gene_id "MPG000258"; +NC_000962.3 miniprot transcript 500350 501018 1129 - . transcript_id "MPT000258"; gene_id "MPG000258"; +NC_000962.3 miniprot exon 500350 501018 1129 - . transcript_id "MPT000258"; gene_id "MPG000258"; +NC_000962.3 miniprot CDS 500353 501018 1129 - 0 transcript_id "MPT000258"; gene_id "MPG000258"; +NC_000962.3 miniprot gene 595464 596390 1555 - . gene_id "MPG000259"; +NC_000962.3 miniprot transcript 595464 596390 1555 - . transcript_id "MPT000259"; gene_id "MPG000259"; +NC_000962.3 miniprot exon 595464 596390 1555 - . transcript_id "MPT000259"; gene_id "MPG000259"; +NC_000962.3 miniprot CDS 595467 596390 1555 - 0 transcript_id "MPT000259"; gene_id "MPG000259"; +NC_000962.3 miniprot gene 307877 309547 2882 - . gene_id "MPG000260"; +NC_000962.3 miniprot transcript 307877 309547 2882 - . transcript_id "MPT000260"; gene_id "MPG000260"; +NC_000962.3 miniprot exon 307877 309547 2882 - . transcript_id "MPT000260"; gene_id "MPG000260"; +NC_000962.3 miniprot CDS 307880 309547 2882 - 0 transcript_id "MPT000260"; gene_id "MPG000260"; +NC_000962.3 miniprot gene 39877 41202 2207 - . gene_id "MPG000261"; +NC_000962.3 miniprot transcript 39877 41202 2207 - . transcript_id "MPT000261"; gene_id "MPG000261"; +NC_000962.3 miniprot exon 39877 41202 2207 - . transcript_id "MPT000261"; gene_id "MPG000261"; +NC_000962.3 miniprot CDS 39880 41202 2207 - 0 transcript_id "MPT000261"; gene_id "MPG000261"; +NC_000962.3 miniprot gene 103716 105101 1506 - . gene_id "MPG000262"; +NC_000962.3 miniprot transcript 103716 105101 1506 - . transcript_id "MPT000262"; gene_id "MPG000262"; +NC_000962.3 miniprot exon 103716 105101 1506 - . transcript_id "MPT000262"; gene_id "MPG000262"; +NC_000962.3 miniprot CDS 103716 105101 1506 - 0 transcript_id "MPT000262"; gene_id "MPG000262"; +NC_000962.3 miniprot gene 36867 37262 659 + . gene_id "MPG000263"; +NC_000962.3 miniprot transcript 36867 37262 659 + . transcript_id "MPT000263"; gene_id "MPG000263"; +NC_000962.3 miniprot exon 36867 37262 659 + . transcript_id "MPT000263"; gene_id "MPG000263"; +NC_000962.3 miniprot CDS 36867 37259 659 + 0 transcript_id "MPT000263"; gene_id "MPG000263"; +NC_000962.3 miniprot gene 560848 561711 1524 - . gene_id "MPG000264"; +NC_000962.3 miniprot transcript 560848 561711 1524 - . transcript_id "MPT000264"; gene_id "MPG000264"; +NC_000962.3 miniprot exon 560848 561711 1524 - . transcript_id "MPT000264"; gene_id "MPG000264"; +NC_000962.3 miniprot CDS 560851 561711 1524 - 0 transcript_id "MPT000264"; gene_id "MPG000264"; +NC_000962.3 miniprot gene 392732 394024 577 - . gene_id "MPG000265"; +NC_000962.3 miniprot transcript 392732 394024 577 - . transcript_id "MPT000265"; gene_id "MPG000265"; +NC_000962.3 miniprot exon 392732 394024 577 - . transcript_id "MPT000265"; gene_id "MPG000265"; +NC_000962.3 miniprot CDS 392732 394024 577 - 0 transcript_id "MPT000265"; gene_id "MPG000265"; +NC_000962.3 miniprot gene 227847 230402 570 + . gene_id "MPG000266"; +NC_000962.3 miniprot transcript 227847 230402 570 + . transcript_id "MPT000266"; gene_id "MPG000266"; +NC_000962.3 miniprot exon 227847 228346 378 + . transcript_id "MPT000266"; gene_id "MPG000266"; +NC_000962.3 miniprot CDS 227847 228346 378 + 0 transcript_id "MPT000266"; gene_id "MPG000266"; +NC_000962.3 miniprot exon 230153 230402 192 + . transcript_id "MPT000266"; gene_id "MPG000266"; +NC_000962.3 miniprot CDS 230153 230402 192 + 1 transcript_id "MPT000266"; gene_id "MPG000266"; +NC_000962.3 miniprot gene 349624 349707 122 + . gene_id "MPG000267"; +NC_000962.3 miniprot transcript 349624 349707 122 + . transcript_id "MPT000267"; gene_id "MPG000267"; +NC_000962.3 miniprot exon 349624 349707 122 + . transcript_id "MPT000267"; gene_id "MPG000267"; +NC_000962.3 miniprot CDS 349624 349707 122 + 0 transcript_id "MPT000267"; gene_id "MPG000267"; +NC_000962.3 miniprot gene 171710 171880 198 + . gene_id "MPG000268"; +NC_000962.3 miniprot transcript 171710 171880 198 + . transcript_id "MPT000268"; gene_id "MPG000268"; +NC_000962.3 miniprot exon 171710 171880 198 + . transcript_id "MPT000268"; gene_id "MPG000268"; +NC_000962.3 miniprot CDS 171710 171880 198 + 0 transcript_id "MPT000268"; gene_id "MPG000268"; +NC_000962.3 miniprot gene 335801 336310 617 - . gene_id "MPG000269"; +NC_000962.3 miniprot transcript 335801 336310 617 - . transcript_id "MPT000269"; gene_id "MPG000269"; +NC_000962.3 miniprot exon 335801 336310 617 - . transcript_id "MPT000269"; gene_id "MPG000269"; +NC_000962.3 miniprot CDS 335801 336310 617 - 0 transcript_id "MPT000269"; gene_id "MPG000269"; +NC_000962.3 miniprot gene 622793 624577 3163 + . gene_id "MPG000270"; +NC_000962.3 miniprot transcript 622793 624577 3163 + . transcript_id "MPT000270"; gene_id "MPG000270"; +NC_000962.3 miniprot exon 622793 624577 3163 + . transcript_id "MPT000270"; gene_id "MPG000270"; +NC_000962.3 miniprot CDS 622793 624574 3163 + 0 transcript_id "MPT000270"; gene_id "MPG000270"; +NC_000962.3 miniprot gene 149533 363109 1472 + . gene_id "MPG000271"; +NC_000962.3 miniprot transcript 149533 363109 1472 + . transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot exon 149533 150231 771 + . transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot CDS 149533 150231 771 + 0 transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot exon 361658 362035 197 + . transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot CDS 361658 362035 197 + 0 transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot exon 362171 363109 504 + . transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot CDS 362171 363106 504 + 0 transcript_id "MPT000271"; gene_id "MPG000271"; +NC_000962.3 miniprot gene 384535 385149 1081 + . gene_id "MPG000272"; +NC_000962.3 miniprot transcript 384535 385149 1081 + . transcript_id "MPT000272"; gene_id "MPG000272"; +NC_000962.3 miniprot exon 384535 385149 1081 + . transcript_id "MPT000272"; gene_id "MPG000272"; +NC_000962.3 miniprot CDS 384535 385146 1081 + 0 transcript_id "MPT000272"; gene_id "MPG000272"; +NC_000962.3 miniprot gene 535224 536507 2236 - . gene_id "MPG000273"; +NC_000962.3 miniprot transcript 535224 536507 2236 - . transcript_id "MPT000273"; gene_id "MPG000273"; +NC_000962.3 miniprot exon 535224 536507 2236 - . transcript_id "MPT000273"; gene_id "MPG000273"; +NC_000962.3 miniprot CDS 535227 536507 2236 - 0 transcript_id "MPT000273"; gene_id "MPG000273"; +NC_000962.3 miniprot gene 668579 669745 2037 - . gene_id "MPG000274"; +NC_000962.3 miniprot transcript 668579 669745 2037 - . transcript_id "MPT000274"; gene_id "MPG000274"; +NC_000962.3 miniprot exon 668579 669745 2037 - . transcript_id "MPT000274"; gene_id "MPG000274"; +NC_000962.3 miniprot CDS 668582 669745 2037 - 0 transcript_id "MPT000274"; gene_id "MPG000274"; +NC_000962.3 miniprot gene 689059 690396 556 + . gene_id "MPG000275"; +NC_000962.3 miniprot transcript 689059 690396 556 + . transcript_id "MPT000275"; gene_id "MPG000275"; +NC_000962.3 miniprot exon 689059 690396 556 + . transcript_id "MPT000275"; gene_id "MPG000275"; +NC_000962.3 miniprot CDS 689059 690396 556 + 0 transcript_id "MPT000275"; gene_id "MPG000275"; +NC_000962.3 miniprot gene 486043 586047 2361 + . gene_id "MPG000276"; +NC_000962.3 miniprot transcript 486043 586047 2361 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 486043 488796 2169 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 486043 488796 2169 + 0 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 498600 498783 39 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 498600 498783 39 + 0 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 502457 503065 43 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 502457 503065 43 + 2 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 539750 540052 29 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 539750 540052 29 + 2 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 562305 562444 34 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 562305 562444 34 + 2 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot exon 585731 586047 47 + . transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot CDS 585731 586047 47 + 0 transcript_id "MPT000276"; gene_id "MPG000276"; +NC_000962.3 miniprot gene 544835 545185 632 + . gene_id "MPG000277"; +NC_000962.3 miniprot transcript 544835 545185 632 + . transcript_id "MPT000277"; gene_id "MPG000277"; +NC_000962.3 miniprot exon 544835 545185 632 + . transcript_id "MPT000277"; gene_id "MPG000277"; +NC_000962.3 miniprot CDS 544835 545182 632 + 0 transcript_id "MPT000277"; gene_id "MPG000277"; +NC_000962.3 miniprot gene 260019 260663 321 - . gene_id "MPG000278"; +NC_000962.3 miniprot transcript 260019 260663 321 - . transcript_id "MPT000278"; gene_id "MPG000278"; +NC_000962.3 miniprot exon 260019 260663 321 - . transcript_id "MPT000278"; gene_id "MPG000278"; +NC_000962.3 miniprot CDS 260019 260663 321 - 0 transcript_id "MPT000278"; gene_id "MPG000278"; +NC_000962.3 miniprot gene 387879 388541 400 + . gene_id "MPG000279"; +NC_000962.3 miniprot transcript 387879 388541 400 + . transcript_id "MPT000279"; gene_id "MPG000279"; +NC_000962.3 miniprot exon 387879 388541 400 + . transcript_id "MPT000279"; gene_id "MPG000279"; +NC_000962.3 miniprot CDS 387879 388541 400 + 0 transcript_id "MPT000279"; gene_id "MPG000279"; +NC_000962.3 miniprot gene 497314 498300 1680 - . gene_id "MPG000280"; +NC_000962.3 miniprot transcript 497314 498300 1680 - . transcript_id "MPT000280"; gene_id "MPG000280"; +NC_000962.3 miniprot exon 497314 498300 1680 - . transcript_id "MPT000280"; gene_id "MPG000280"; +NC_000962.3 miniprot CDS 497317 498300 1680 - 0 transcript_id "MPT000280"; gene_id "MPG000280"; +NC_000962.3 miniprot gene 502167 502373 336 + . gene_id "MPG000281"; +NC_000962.3 miniprot transcript 502167 502373 336 + . transcript_id "MPT000281"; gene_id "MPG000281"; +NC_000962.3 miniprot exon 502167 502373 336 + . transcript_id "MPT000281"; gene_id "MPG000281"; +NC_000962.3 miniprot CDS 502167 502370 336 + 0 transcript_id "MPT000281"; gene_id "MPG000281"; +NC_000962.3 miniprot gene 96895 189830 285 + . gene_id "MPG000282"; +NC_000962.3 miniprot transcript 96895 189830 285 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 96895 96978 58 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 96895 96978 58 + 0 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 121330 121488 29 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 121330 121488 29 + 0 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 138661 138897 34 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 138661 138897 34 + 2 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 177478 177562 45 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 177478 177562 45 + 2 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 179082 179148 33 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 179082 179148 33 + 1 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 183562 184122 26 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 183562 184122 26 + 0 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot exon 189195 189830 60 + . transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot CDS 189195 189830 60 + 0 transcript_id "MPT000282"; gene_id "MPG000282"; +NC_000962.3 miniprot gene 337853 434679 674 - . gene_id "MPG000283"; +NC_000962.3 miniprot transcript 337853 434679 674 - . transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot exon 434145 434679 554 - . transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot CDS 434145 434679 554 - 0 transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot exon 428269 428596 46 - . transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot CDS 428269 428596 46 - 2 transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot exon 337853 338141 74 - . transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot CDS 337853 338141 74 - 1 transcript_id "MPT000283"; gene_id "MPG000283"; +NC_000962.3 miniprot gene 149533 363040 1281 + . gene_id "MPG000284"; +NC_000962.3 miniprot transcript 149533 363040 1281 + . transcript_id "MPT000284"; gene_id "MPG000284"; +NC_000962.3 miniprot exon 149533 150754 990 + . transcript_id "MPT000284"; gene_id "MPG000284"; +NC_000962.3 miniprot CDS 149533 150754 990 + 0 transcript_id "MPT000284"; gene_id "MPG000284"; +NC_000962.3 miniprot exon 362442 363040 291 + . transcript_id "MPT000284"; gene_id "MPG000284"; +NC_000962.3 miniprot CDS 362442 363040 291 + 2 transcript_id "MPT000284"; gene_id "MPG000284"; +NC_000962.3 miniprot gene 132443 150491 417 - . gene_id "MPG000285"; +NC_000962.3 miniprot transcript 132443 150491 417 - . transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot exon 149941 150491 303 - . transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot CDS 149941 150491 303 - 0 transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot exon 133281 133408 28 - . transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot CDS 133281 133408 28 - 1 transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot exon 132443 132726 86 - . transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot CDS 132443 132726 86 - 2 transcript_id "MPT000285"; gene_id "MPG000285"; +NC_000962.3 miniprot gene 583701 584690 1793 - . gene_id "MPG000286"; +NC_000962.3 miniprot transcript 583701 584690 1793 - . transcript_id "MPT000286"; gene_id "MPG000286"; +NC_000962.3 miniprot exon 583701 584690 1793 - . transcript_id "MPT000286"; gene_id "MPG000286"; +NC_000962.3 miniprot CDS 583704 584690 1793 - 0 transcript_id "MPT000286"; gene_id "MPG000286"; +NC_000962.3 miniprot gene 571710 573065 2374 + . gene_id "MPG000287"; +NC_000962.3 miniprot transcript 571710 573065 2374 + . transcript_id "MPT000287"; gene_id "MPG000287"; +NC_000962.3 miniprot exon 571710 573065 2374 + . transcript_id "MPT000287"; gene_id "MPG000287"; +NC_000962.3 miniprot CDS 571710 573062 2374 + 0 transcript_id "MPT000287"; gene_id "MPG000287"; +NC_000962.3 miniprot gene 604602 605591 1660 + . gene_id "MPG000288"; +NC_000962.3 miniprot transcript 604602 605591 1660 + . transcript_id "MPT000288"; gene_id "MPG000288"; +NC_000962.3 miniprot exon 604602 605591 1660 + . transcript_id "MPT000288"; gene_id "MPG000288"; +NC_000962.3 miniprot CDS 604602 605588 1660 + 0 transcript_id "MPT000288"; gene_id "MPG000288"; +NC_000962.3 miniprot gene 639012 639956 1652 - . gene_id "MPG000289"; +NC_000962.3 miniprot transcript 639012 639956 1652 - . transcript_id "MPT000289"; gene_id "MPG000289"; +NC_000962.3 miniprot exon 639012 639956 1652 - . transcript_id "MPT000289"; gene_id "MPG000289"; +NC_000962.3 miniprot CDS 639015 639956 1652 - 0 transcript_id "MPT000289"; gene_id "MPG000289"; +NC_000962.3 miniprot gene 558895 559755 1400 + . gene_id "MPG000290"; +NC_000962.3 miniprot transcript 558895 559755 1400 + . transcript_id "MPT000290"; gene_id "MPG000290"; +NC_000962.3 miniprot exon 558895 559755 1400 + . transcript_id "MPT000290"; gene_id "MPG000290"; +NC_000962.3 miniprot CDS 558895 559752 1400 + 0 transcript_id "MPT000290"; gene_id "MPG000290"; +NC_000962.3 miniprot gene 459489 461984 1862 - . gene_id "MPG000291"; +NC_000962.3 miniprot transcript 459489 461984 1862 - . transcript_id "MPT000291"; gene_id "MPG000291"; +NC_000962.3 miniprot exon 459489 461984 1862 - . transcript_id "MPT000291"; gene_id "MPG000291"; +NC_000962.3 miniprot CDS 459489 461984 1862 - 0 transcript_id "MPT000291"; gene_id "MPG000291"; +NC_000962.3 miniprot gene 195146 196597 684 + . gene_id "MPG000292"; +NC_000962.3 miniprot transcript 195146 196597 684 + . transcript_id "MPT000292"; gene_id "MPG000292"; +NC_000962.3 miniprot exon 195146 196597 684 + . transcript_id "MPT000292"; gene_id "MPG000292"; +NC_000962.3 miniprot CDS 195146 196597 684 + 0 transcript_id "MPT000292"; gene_id "MPG000292"; +NC_000962.3 miniprot gene 483980 485719 1212 + . gene_id "MPG000293"; +NC_000962.3 miniprot transcript 483980 485719 1212 + . transcript_id "MPT000293"; gene_id "MPG000293"; +NC_000962.3 miniprot exon 483980 485719 1212 + . transcript_id "MPT000293"; gene_id "MPG000293"; +NC_000962.3 miniprot CDS 483980 485719 1212 + 0 transcript_id "MPT000293"; gene_id "MPG000293"; +NC_000962.3 miniprot gene 463438 466665 2606 + . gene_id "MPG000294"; +NC_000962.3 miniprot transcript 463438 466665 2606 + . transcript_id "MPT000294"; gene_id "MPG000294"; +NC_000962.3 miniprot exon 463438 466665 2606 + . transcript_id "MPT000294"; gene_id "MPG000294"; +NC_000962.3 miniprot CDS 463438 466665 2606 + 0 transcript_id "MPT000294"; gene_id "MPG000294"; +NC_000962.3 miniprot gene 673209 675916 1909 - . gene_id "MPG000295"; +NC_000962.3 miniprot transcript 673209 675916 1909 - . transcript_id "MPT000295"; gene_id "MPG000295"; +NC_000962.3 miniprot exon 674194 675916 1396 - . transcript_id "MPT000295"; gene_id "MPG000295"; +NC_000962.3 miniprot CDS 674194 675916 1396 - 0 transcript_id "MPT000295"; gene_id "MPG000295"; +NC_000962.3 miniprot exon 673209 673926 513 - . transcript_id "MPT000295"; gene_id "MPG000295"; +NC_000962.3 miniprot CDS 673209 673926 513 - 2 transcript_id "MPT000295"; gene_id "MPG000295"; +NC_000962.3 miniprot gene 337924 434679 568 - . gene_id "MPG000296"; +NC_000962.3 miniprot transcript 337924 434679 568 - . transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot exon 434145 434679 449 - . transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot CDS 434145 434679 449 - 0 transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot exon 338578 338961 51 - . transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot CDS 338578 338961 51 - 2 transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot exon 337924 338141 68 - . transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot CDS 337924 338141 68 - 2 transcript_id "MPT000296"; gene_id "MPG000296"; +NC_000962.3 miniprot gene 486031 534399 1359 + . gene_id "MPG000297"; +NC_000962.3 miniprot transcript 486031 534399 1359 + . transcript_id "MPT000297"; gene_id "MPG000297"; +NC_000962.3 miniprot exon 486031 488664 1308 + . transcript_id "MPT000297"; gene_id "MPG000297"; +NC_000962.3 miniprot CDS 486031 488664 1308 + 0 transcript_id "MPT000297"; gene_id "MPG000297"; +NC_000962.3 miniprot exon 534265 534399 51 + . transcript_id "MPT000297"; gene_id "MPG000297"; +NC_000962.3 miniprot CDS 534265 534399 51 + 0 transcript_id "MPT000297"; gene_id "MPG000297"; +NC_000962.3 miniprot gene 65012 65350 652 - . gene_id "MPG000298"; +NC_000962.3 miniprot transcript 65012 65350 652 - . transcript_id "MPT000298"; gene_id "MPG000298"; +NC_000962.3 miniprot exon 65012 65350 652 - . transcript_id "MPT000298"; gene_id "MPG000298"; +NC_000962.3 miniprot CDS 65015 65350 652 - 0 transcript_id "MPT000298"; gene_id "MPG000298"; +NC_000962.3 miniprot gene 193626 194111 813 + . gene_id "MPG000299"; +NC_000962.3 miniprot transcript 193626 194111 813 + . transcript_id "MPT000299"; gene_id "MPG000299"; +NC_000962.3 miniprot exon 193626 194111 813 + . transcript_id "MPT000299"; gene_id "MPG000299"; +NC_000962.3 miniprot CDS 193626 194108 813 + 0 transcript_id "MPT000299"; gene_id "MPG000299"; +NC_000962.3 miniprot gene 415050 415460 690 + . gene_id "MPG000300"; +NC_000962.3 miniprot transcript 415050 415460 690 + . transcript_id "MPT000300"; gene_id "MPG000300"; +NC_000962.3 miniprot exon 415050 415460 690 + . transcript_id "MPT000300"; gene_id "MPG000300"; +NC_000962.3 miniprot CDS 415050 415457 690 + 0 transcript_id "MPT000300"; gene_id "MPG000300"; +NC_000962.3 miniprot gene 635573 635875 517 - . gene_id "MPG000301"; +NC_000962.3 miniprot transcript 635573 635875 517 - . transcript_id "MPT000301"; gene_id "MPG000301"; +NC_000962.3 miniprot exon 635573 635875 517 - . transcript_id "MPT000301"; gene_id "MPG000301"; +NC_000962.3 miniprot CDS 635576 635875 517 - 0 transcript_id "MPT000301"; gene_id "MPG000301"; +NC_000962.3 miniprot gene 652771 653778 1659 + . gene_id "MPG000302"; +NC_000962.3 miniprot transcript 652771 653778 1659 + . transcript_id "MPT000302"; gene_id "MPG000302"; +NC_000962.3 miniprot exon 652771 653778 1659 + . transcript_id "MPT000302"; gene_id "MPG000302"; +NC_000962.3 miniprot CDS 652771 653775 1659 + 0 transcript_id "MPT000302"; gene_id "MPG000302"; +NC_000962.3 miniprot gene 208417 208971 939 + . gene_id "MPG000303"; +NC_000962.3 miniprot transcript 208417 208971 939 + . transcript_id "MPT000303"; gene_id "MPG000303"; +NC_000962.3 miniprot exon 208417 208971 939 + . transcript_id "MPT000303"; gene_id "MPG000303"; +NC_000962.3 miniprot CDS 208417 208968 939 + 0 transcript_id "MPT000303"; gene_id "MPG000303"; +NC_000962.3 miniprot gene 219486 219917 742 + . gene_id "MPG000304"; +NC_000962.3 miniprot transcript 219486 219917 742 + . transcript_id "MPT000304"; gene_id "MPG000304"; +NC_000962.3 miniprot exon 219486 219917 742 + . transcript_id "MPT000304"; gene_id "MPG000304"; +NC_000962.3 miniprot CDS 219486 219914 742 + 0 transcript_id "MPT000304"; gene_id "MPG000304"; +NC_000962.3 miniprot gene 697904 698410 881 - . gene_id "MPG000305"; +NC_000962.3 miniprot transcript 697904 698410 881 - . transcript_id "MPT000305"; gene_id "MPG000305"; +NC_000962.3 miniprot exon 697904 698410 881 - . transcript_id "MPT000305"; gene_id "MPG000305"; +NC_000962.3 miniprot CDS 697907 698410 881 - 0 transcript_id "MPT000305"; gene_id "MPG000305"; +NC_000962.3 miniprot gene 80185 80511 421 - . gene_id "MPG000306"; +NC_000962.3 miniprot transcript 80185 80511 421 - . transcript_id "MPT000306"; gene_id "MPG000306"; +NC_000962.3 miniprot exon 80185 80511 421 - . transcript_id "MPT000306"; gene_id "MPG000306"; +NC_000962.3 miniprot CDS 80185 80511 421 - 0 transcript_id "MPT000306"; gene_id "MPG000306"; +NC_000962.3 miniprot gene 302173 302652 841 - . gene_id "MPG000307"; +NC_000962.3 miniprot transcript 302173 302652 841 - . transcript_id "MPT000307"; gene_id "MPG000307"; +NC_000962.3 miniprot exon 302173 302652 841 - . transcript_id "MPT000307"; gene_id "MPG000307"; +NC_000962.3 miniprot CDS 302176 302652 841 - 0 transcript_id "MPT000307"; gene_id "MPG000307"; +NC_000962.3 miniprot gene 46581 47207 1025 - . gene_id "MPG000308"; +NC_000962.3 miniprot transcript 46581 47207 1025 - . transcript_id "MPT000308"; gene_id "MPG000308"; +NC_000962.3 miniprot exon 46581 47207 1025 - . transcript_id "MPT000308"; gene_id "MPG000308"; +NC_000962.3 miniprot CDS 46584 47207 1025 - 0 transcript_id "MPT000308"; gene_id "MPG000308"; +NC_000962.3 miniprot gene 516895 517803 1580 - . gene_id "MPG000309"; +NC_000962.3 miniprot transcript 516895 517803 1580 - . transcript_id "MPT000309"; gene_id "MPG000309"; +NC_000962.3 miniprot exon 516895 517803 1580 - . transcript_id "MPT000309"; gene_id "MPG000309"; +NC_000962.3 miniprot CDS 516898 517803 1580 - 0 transcript_id "MPT000309"; gene_id "MPG000309"; +NC_000962.3 miniprot gene 507758 508585 1409 - . gene_id "MPG000310"; +NC_000962.3 miniprot transcript 507758 508585 1409 - . transcript_id "MPT000310"; gene_id "MPG000310"; +NC_000962.3 miniprot exon 507758 508585 1409 - . transcript_id "MPT000310"; gene_id "MPG000310"; +NC_000962.3 miniprot CDS 507761 508585 1409 - 0 transcript_id "MPT000310"; gene_id "MPG000310"; +NC_000962.3 miniprot gene 525387 526082 1183 - . gene_id "MPG000311"; +NC_000962.3 miniprot transcript 525387 526082 1183 - . transcript_id "MPT000311"; gene_id "MPG000311"; +NC_000962.3 miniprot exon 525387 526082 1183 - . transcript_id "MPT000311"; gene_id "MPG000311"; +NC_000962.3 miniprot CDS 525390 526082 1183 - 0 transcript_id "MPT000311"; gene_id "MPG000311"; +NC_000962.3 miniprot gene 339364 340932 802 + . gene_id "MPG000312"; +NC_000962.3 miniprot transcript 339364 340932 802 + . transcript_id "MPT000312"; gene_id "MPG000312"; +NC_000962.3 miniprot exon 339364 340470 647 + . transcript_id "MPT000312"; gene_id "MPG000312"; +NC_000962.3 miniprot CDS 339364 340470 647 + 0 transcript_id "MPT000312"; gene_id "MPG000312"; +NC_000962.3 miniprot exon 340769 340932 155 + . transcript_id "MPT000312"; gene_id "MPG000312"; +NC_000962.3 miniprot CDS 340769 340932 155 + 0 transcript_id "MPT000312"; gene_id "MPG000312"; +NC_000962.3 miniprot gene 349935 351458 817 + . gene_id "MPG000313"; +NC_000962.3 miniprot transcript 349935 351458 817 + . transcript_id "MPT000313"; gene_id "MPG000313"; +NC_000962.3 miniprot exon 349935 351458 817 + . transcript_id "MPT000313"; gene_id "MPG000313"; +NC_000962.3 miniprot CDS 349935 351458 817 + 0 transcript_id "MPT000313"; gene_id "MPG000313"; +NC_000962.3 miniprot gene 403346 468001 556 - . gene_id "MPG000314"; +NC_000962.3 miniprot transcript 403346 468001 556 - . transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot exon 467463 468001 453 - . transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot CDS 467463 468001 453 - 0 transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot exon 427161 427507 45 - . transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot CDS 427161 427507 45 - 1 transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot exon 403346 403546 58 - . transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot CDS 403346 403546 58 - 0 transcript_id "MPT000314"; gene_id "MPG000314"; +NC_000962.3 miniprot gene 349935 351476 2668 + . gene_id "MPG000315"; +NC_000962.3 miniprot transcript 349935 351476 2668 + . transcript_id "MPT000315"; gene_id "MPG000315"; +NC_000962.3 miniprot exon 349935 351476 2668 + . transcript_id "MPT000315"; gene_id "MPG000315"; +NC_000962.3 miniprot CDS 349935 351473 2668 + 0 transcript_id "MPT000315"; gene_id "MPG000315"; +NC_000962.3 miniprot gene 597274 599985 1040 + . gene_id "MPG000316"; +NC_000962.3 miniprot transcript 597274 599985 1040 + . transcript_id "MPT000316"; gene_id "MPG000316"; +NC_000962.3 miniprot exon 597274 599985 1040 + . transcript_id "MPT000316"; gene_id "MPG000316"; +NC_000962.3 miniprot CDS 597274 599985 1040 + 0 transcript_id "MPT000316"; gene_id "MPG000316"; +NC_000962.3 miniprot gene 557527 558813 2223 + . gene_id "MPG000317"; +NC_000962.3 miniprot transcript 557527 558813 2223 + . transcript_id "MPT000317"; gene_id "MPG000317"; +NC_000962.3 miniprot exon 557527 558813 2223 + . transcript_id "MPT000317"; gene_id "MPG000317"; +NC_000962.3 miniprot CDS 557527 558810 2223 + 0 transcript_id "MPT000317"; gene_id "MPG000317"; +NC_000962.3 miniprot gene 102815 103663 1465 - . gene_id "MPG000318"; +NC_000962.3 miniprot transcript 102815 103663 1465 - . transcript_id "MPT000318"; gene_id "MPG000318"; +NC_000962.3 miniprot exon 102815 103663 1465 - . transcript_id "MPT000318"; gene_id "MPG000318"; +NC_000962.3 miniprot CDS 102818 103663 1465 - 0 transcript_id "MPT000318"; gene_id "MPG000318"; +NC_000962.3 miniprot gene 231647 232231 975 + . gene_id "MPG000319"; +NC_000962.3 miniprot transcript 231647 232231 975 + . transcript_id "MPT000319"; gene_id "MPG000319"; +NC_000962.3 miniprot exon 231647 232231 975 + . transcript_id "MPT000319"; gene_id "MPG000319"; +NC_000962.3 miniprot CDS 231647 232228 975 + 0 transcript_id "MPT000319"; gene_id "MPG000319"; +NC_000962.3 miniprot gene 624473 625480 1710 - . gene_id "MPG000320"; +NC_000962.3 miniprot transcript 624473 625480 1710 - . transcript_id "MPT000320"; gene_id "MPG000320"; +NC_000962.3 miniprot exon 624473 625480 1710 - . transcript_id "MPT000320"; gene_id "MPG000320"; +NC_000962.3 miniprot CDS 624476 625480 1710 - 0 transcript_id "MPT000320"; gene_id "MPG000320"; +NC_000962.3 miniprot gene 100583 102868 3786 + . gene_id "MPG000321"; +NC_000962.3 miniprot transcript 100583 102868 3786 + . transcript_id "MPT000321"; gene_id "MPG000321"; +NC_000962.3 miniprot exon 100583 102868 3786 + . transcript_id "MPT000321"; gene_id "MPG000321"; +NC_000962.3 miniprot CDS 100583 102865 3786 + 0 transcript_id "MPT000321"; gene_id "MPG000321"; +NC_000962.3 miniprot gene 371955 434679 1664 - . gene_id "MPG000322"; +NC_000962.3 miniprot transcript 371955 434679 1664 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot exon 433957 434679 707 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot CDS 433957 434679 707 - 0 transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot exon 432692 433029 319 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot CDS 432692 433029 319 - 0 transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot exon 429854 430063 181 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot CDS 429854 430063 181 - 1 transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot exon 373274 373525 219 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot CDS 373274 373525 219 - 1 transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot exon 371955 372258 238 - . transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot CDS 371955 372258 238 - 1 transcript_id "MPT000322"; gene_id "MPG000322"; +NC_000962.3 miniprot gene 349624 349929 394 + . gene_id "MPG000323"; +NC_000962.3 miniprot transcript 349624 349929 394 + . transcript_id "MPT000323"; gene_id "MPG000323"; +NC_000962.3 miniprot exon 349624 349929 394 + . transcript_id "MPT000323"; gene_id "MPG000323"; +NC_000962.3 miniprot CDS 349624 349929 394 + 0 transcript_id "MPT000323"; gene_id "MPG000323"; +NC_000962.3 miniprot gene 462135 463307 2088 + . gene_id "MPG000324"; +NC_000962.3 miniprot transcript 462135 463307 2088 + . transcript_id "MPT000324"; gene_id "MPG000324"; +NC_000962.3 miniprot exon 462135 463307 2088 + . transcript_id "MPT000324"; gene_id "MPG000324"; +NC_000962.3 miniprot CDS 462135 463304 2088 + 0 transcript_id "MPT000324"; gene_id "MPG000324"; +NC_000962.3 miniprot gene 622121 622282 272 - . gene_id "MPG000325"; +NC_000962.3 miniprot transcript 622121 622282 272 - . transcript_id "MPT000325"; gene_id "MPG000325"; +NC_000962.3 miniprot exon 622121 622282 272 - . transcript_id "MPT000325"; gene_id "MPG000325"; +NC_000962.3 miniprot CDS 622124 622282 272 - 0 transcript_id "MPT000325"; gene_id "MPG000325";
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.paf Thu Apr 06 09:20:48 2023 +0000 @@ -0,0 +1,325 @@ +tr|I6YGH7|I6YGH7_MYCTU 377 0 375 - NC_000962.3 699930 326271 327381 396 1158 0 AS:i:516 ms:i:512 np:i:197 da:i:9 do:i:3 cg:Z:17M1D20M14I2M1I24M1I195M4D61M6D40M 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+sp|O05779|FTSE_MYCTU 230 2 213 + NC_000962.3 699930 81684 82323 219 642 0 AS:i:300 ms:i:300 np:i:116 da:i:-1 do:i:342 cg:Z:13M2D66M1D121M1I10M cs:Z:*ctcI*agcT*attL*cagD*aacH*ctcV*gtcT*gttK*gagQ:1*tacK:1*ggtS-ggatac:1*cttR*aggP*ccgA*atcL*aacD*ggtD*ttgI:1*ctcV*gacK*gtgI*gcaD*gccK:1*tcgE*ttgF:1*atgF:1*ctcI:4*tgcS:2*acgS:1*ctgF*cttM*tccR*tgtL:1*ggcL*ggcA*attA*ctgE*cgcT:1*aagT:2*gcgD*atcV*aagR*ttcV*gacS*gaaK*gtcF*gacH*atcV*acgN*acgK:1*caaR:1*gccR*gagH*ctgV*gcgP*aacK*tacL:1*cgtQ-aac*aagV*gtcI:1*atcC:3*gcgD:1*aatR:1*gtgL*cccQ*agcQ*ctgK:1*gctV*gtcY*gagD:2*atgA*gtgF*ccgA:1*cgcE*tcgV*gccI:1*atgK*tcaR*cgcT*aggD:1*tcgI*cgtN:1*cgtV*gccV*gaaP:1*ctgV:1*gcgE*cgcT:1*aatG:1*gcgS*gaaG*cgaK*atgA:1*catR*cgaL:1*ggtD*gatE:4*cagE:5*gtgI:3*attF*gcgV*ctgN*gatR:1*ccaL*ctgV*atcL:6*gcaG*cacN:2*ttcP*atcE*cagT*gtgS*gagR*gagD*gtgI*ctgM*cggD:1*atcL*cgcE*gaaR*ctgI*gccN*gatR*ggcT*gagG*cgtT*gtgT:1*gtgL*gtcM:4*agcH*aggH*atgI*ttgV+D*ccgS:1*gccR*gatQ:5*acaS +tr|O06302|O06302_MYCTU 126 0 126 + NC_000962.3 699930 423638 424016 378 378 0 AS:i:620 ms:i:620 np:i:126 da:i:0 do:i:0 cg:Z:126M cs:Z::126 +sp|O06391|Y525_MYCTU 202 0 202 + NC_000962.3 699930 616222 616828 606 606 0 AS:i:1071 ms:i:1071 np:i:202 da:i:0 do:i:0 cg:Z:202M cs:Z::202 +tr|O06394|O06394_MYCTU 529 0 529 + NC_000962.3 699930 618304 619891 1587 1587 0 AS:i:2736 ms:i:2736 np:i:529 da:i:0 do:i:0 cg:Z:529M cs:Z::529 +tr|O53632|O53632_MYCTU 249 0 249 + NC_000962.3 699930 133019 133766 747 747 0 AS:i:1267 ms:i:1267 np:i:249 da:i:0 do:i:0 cg:Z:249M cs:Z::249 +tr|O53651|O53651_MYCTU 229 0 229 + NC_000962.3 699930 237205 237892 687 687 0 AS:i:1144 ms:i:1144 np:i:229 da:i:0 do:i:0 cg:Z:229M cs:Z::229 +tr|O53680|O53680_MYCTU 193 0 193 + NC_000962.3 699930 330421 331000 579 579 0 AS:i:1032 ms:i:1032 np:i:193 da:i:0 do:i:0 cg:Z:193M cs:Z::193 +sp|O53901|PKS5_MYCTU 2108 15 882 + NC_000962.3 699930 486051 488622 1005 2634 0 AS:i:1369 ms:i:1366 np:i:465 da:i:321 do:i:1314 cg:Z:36M6I6M5I57M1D16M1D199M4D68M1I28M1D18M2I29M1I46M2D62M2D91M4I133M2I57M 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