Mercurial > repos > iuc > mitos2

changeset 8:73b018c57e96 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mitos commit a3f57ea5cedcf7ceb70ea815e965325fab6cc90c
author iuc
date Sat, 23 Mar 2024 14:08:35 +0000
parents b815ec682418
children
files mitos2.xml test-data/NC_012920.seq test-data/mitos2_NC_012920.seq
diffstat 3 files changed, 41 insertions(+), 41 deletions(-) [+]
line wrap: on
line diff
--- a/mitos2.xml	Tue Feb 06 12:36:49 2024 +0000
+++ b/mitos2.xml	Sat Mar 23 14:08:35 2024 +0000
@@ -3,8 +3,8 @@
   <macros>
     <import>macros.xml</import>
     <token name="@MITOS_NAME@">MITOS2</token>
-    <token name="@TOOL_VERSION@">2.1.7</token>
-    <token name="@VERSION_SUFFIX@">1</token>
+    <token name="@TOOL_VERSION@">2.1.8</token>
+    <token name="@VERSION_SUFFIX@">0</token>
   </macros>
   <xrefs>
       <xref type="bio.tools">mitos</xref>
--- a/test-data/NC_012920.seq	Tue Feb 06 12:36:49 2024 +0000
+++ b/test-data/NC_012920.seq	Sat Mar 23 14:08:35 2024 +0000
@@ -39,7 +39,7 @@
 			gene	trnC(gca)
 5826	5761	tRNA
 			product	tRNA-CYS
-5826	5761	gene
+			gene	rrnS
 5826	5761	rRNA
 			product	s-rRNA
 5891	5827	gene
@@ -54,7 +54,7 @@
 			gene	trnD(gtc)
 7518	7585	tRNA
 			product	tRNA-ASP
-7518	7585	gene
+			gene	rrnL
 7518	7585	rRNA
 			product	l-rRNA
 8295	8364	gene
@@ -77,7 +77,7 @@
 			gene	trnL1(tag)
 12266	12336	tRNA
 			product	tRNA-LEU1
-12817	12770	gene
+			gene	rrnS
 12817	12770	rRNA
 			product	s-rRNA
 14673	14155	gene
--- a/test-data/mitos2_NC_012920.seq	Tue Feb 06 12:36:49 2024 +0000
+++ b/test-data/mitos2_NC_012920.seq	Sat Mar 23 14:08:35 2024 +0000
@@ -1,72 +1,72 @@
 >Feature NC_012920
-576	646	gene
+577	647	gene
 			gene	trnF(gaa)
-576	646	tRNA
+577	647	tRNA
 			product	tRNA-PHE
-647	1600	gene
-647	1600	rRNA
+			gene	rrnS
+648	1601	rRNA
 			product	s-rRNA
-3229	3303	gene
+3230	3304	gene
 			gene	trnL2(taa)
-3229	3303	tRNA
+3230	3304	tRNA
 			product	tRNA-LEU2
-4262	4330	gene
+4263	4331	gene
 			gene	trnI(gat)
-4262	4330	tRNA
+4263	4331	tRNA
 			product	tRNA-ILE
-4401	4468	gene
+4402	4469	gene
 			gene	trnM(cat)
-4401	4468	tRNA
+4402	4469	tRNA
 			product	tRNA-MET
-5654	5586	gene
+5655	5587	gene
 			gene	trnA(tgc)
-5654	5586	tRNA
+5655	5587	tRNA
 			product	tRNA-ALA
-5728	5656	gene
+5729	5657	gene
 			gene	trnN(gtt)
-5728	5656	tRNA
+5729	5657	tRNA
 			product	tRNA-ASN
-5890	5825	gene
+5891	5826	gene
 			gene	trnY(gta)
-5890	5825	tRNA
+5891	5826	tRNA
 			product	tRNA-TYR
-7513	7445	gene
+7514	7446	gene
 			gene	trnS2(tga)
-7513	7445	tRNA
+7514	7446	tRNA
 			product	tRNA-SER2
-7517	7584	gene
+7518	7585	gene
 			gene	trnD(gtc)
-7517	7584	tRNA
+7518	7585	tRNA
 			product	tRNA-ASP
-8294	8363	gene
+8295	8364	gene
 			gene	trnK(ttt)
-8294	8363	tRNA
+8295	8364	tRNA
 			product	tRNA-LYS
-10404	10468	gene
+10405	10469	gene
 			gene	trnR(tcg)
-10404	10468	tRNA
+10405	10469	tRNA
 			product	tRNA-ARG
-12137	12205	gene
+12138	12206	gene
 			gene	trnH(gtg)
-12137	12205	tRNA
+12138	12206	tRNA
 			product	tRNA-HIS
-12265	12335	gene
+12266	12336	gene
 			gene	trnL1(tag)
-12265	12335	tRNA
+12266	12336	tRNA
 			product	tRNA-LEU1
-14669	14148	gene
+14670	14149	gene
 			gene	nad6
-14669	14148	CDS
+14670	14149	CDS
 			product	NADH dehydrogenase subunit 6
-14741	14673	gene
+14742	14674	gene
 			gene	trnE(ttc)
-14741	14673	tRNA
+14742	14674	tRNA
 			product	tRNA-GLU
-15887	15952	gene
+15888	15953	gene
 			gene	trnT(tgt)
-15887	15952	tRNA
+15888	15953	tRNA
 			product	tRNA-THR
-16022	15955	gene
+16023	15956	gene
 			gene	trnP(tgg)
-16022	15955	tRNA
+16023	15956	tRNA
 			product	tRNA-PRO