Mercurial > repos > iuc > mothur_list_otulabels

changeset 7:5e366a0379e6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ff56a4c9218ddea84ff5cd72fd98c62db212465d"
author iuc
date Fri, 06 Nov 2020 00:10:43 +0000
parents e643cc6c39cb
children c2d81e2bf502
files list.otulabels.xml macros.xml
diffstat 2 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/list.otulabels.xml	Mon Dec 02 06:37:18 2019 -0500
+++ b/list.otulabels.xml	Fri Nov 06 00:10:43 2020 +0000
@@ -77,14 +77,14 @@
 
 **Command Documentation**
 
-The list.otulabels_ command lists otu labels from shared_ or relabund_ file. This list can be used especially with subsampled datasets when used with output from classify.otu_, otu.association_, or corr.axes_ to select specific otus using the get.otus_ or remove.otulabels_ commands
+The list.otulabels_ command lists otu labels from shared_ or relabund_ file. This list can be used especially with subsampled datasets when used with output from classify.otu_, otu.association_, or corr.axes_ to select specific otus using the get.otus_ or remove.otus_ commands
 
 .. _list.otulabels: https://www.mothur.org/wiki/List.otulabels
 .. _classify.otu: https://www.mothur.org/wiki/Classify.otu
 .. _otu.association: https://www.mothur.org/wiki/Otu.association
 .. _corr.axes: https://www.mothur.org/wiki/Corr.axes
 .. _get.otus: https://www.mothur.org/wiki/Get.otus
-.. _remove.otulabels: https://mothur.org/wiki/Remove.otus
+.. _remove.otus: https://www.mothur.org/wiki/Remove.otus
 .. _shared: https://www.mothur.org/wiki/Shared_file
 .. _relabund: https://www.mothur.org/wiki/Get.relabund
 
--- a/macros.xml	Mon Dec 02 06:37:18 2019 -0500
+++ b/macros.xml	Fri Nov 06 00:10:43 2020 +0000
@@ -15,7 +15,7 @@
             <exit_code range="1:" level="fatal"/>
         </stdio>
     </xml>
-    <token name="@SHELL_OPTIONS@">set -o pipefail;</token>
+    <token name="@SHELL_OPTIONS@">set -o pipefail; export TERM=vt100; </token>
 
 
     <!-- Input parameters -->