Mercurial > repos > iuc > multigps
annotate macros.xml @ 2:028fafca04fa draft default tip
"planemo upload commit 9e4d2776d6b3276e2849943439799b82d989bc3b"
author | iuc |
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date | Sun, 22 Dec 2019 12:11:33 -0500 |
parents | 4aa531981208 |
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rev | line source |
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0 | 1 <?xml version='1.0' encoding='UTF-8'?> |
2 <macros> | |
2
028fafca04fa
"planemo upload commit 9e4d2776d6b3276e2849943439799b82d989bc3b"
iuc
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3 <xml name="cond_fixedreadcount"> |
028fafca04fa
"planemo upload commit 9e4d2776d6b3276e2849943439799b82d989bc3b"
iuc
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4 <conditional name="fixedreadcount_cond"> |
028fafca04fa
"planemo upload commit 9e4d2776d6b3276e2849943439799b82d989bc3b"
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5 <param name="fixedreadcount_select" type="select" label="Set fixed per-base read count limit for this replicate?" help="Selecting No uses a global per-base limit that is estimated from a Poisson distribution."> |
028fafca04fa
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6 <option value="no" selected="True">No</option> |
028fafca04fa
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7 <option value="yes">Yes</option> |
028fafca04fa
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8 </param> |
028fafca04fa
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9 <when value="no"/> |
028fafca04fa
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10 <when value="yes"> |
028fafca04fa
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11 <param name="fixedreadcount" type="integer" value="0" min="0" label="Fixed per-base read count limit"/> |
028fafca04fa
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12 </when> |
028fafca04fa
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13 </conditional> |
028fafca04fa
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14 </xml> |
028fafca04fa
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15 <xml name="param_experiment_type"> |
028fafca04fa
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16 <param name="experiment_type" type="select" display="radio" label="Experiment type for this replicate"> |
028fafca04fa
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17 <option value="chipseq" selected="True">ChIP-seq</option> |
028fafca04fa
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18 <option value="chipexo">ChIP-exo</option> |
028fafca04fa
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19 </param> |
028fafca04fa
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20 </xml> |
0 | 21 <xml name="motif_finding_params"> |
22 <param name="memenmotifs" type="integer" min="0" value="3" label="Number of motifs MEME should find for each condition" /> | |
23 <param name="mememinw" type="integer" min="0" value="6" label="Minimum motif width for MEME" /> | |
24 <param name="mememaxw" type="integer" min="0" value="16" label="Maximum motif width for MEME" /> | |
25 </xml> | |
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26 <xml name="requirements"> |
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27 <requirements> |
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28 <requirement type="package" version="1">fonts-conda-ecosystem</requirement> |
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29 <requirement type="package" version="0.74">multigps</requirement> |
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30 <yield/> |
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31 </requirements> |
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32 </xml> |
0 | 33 </macros> |