Mercurial > repos > iuc > multiqc

comparison test-data/aligner_soft_stats.tabular @ 6:01237d721a9f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
author iuc
date Sat, 23 Dec 2017 15:57:55 -0500
parents 3bad335ccea9
children e0f4a651c6b9
comparison
equal deleted inserted replaced
5:5746cb5cf08d 6:01237d721a9f
1 Sample Cutadapt_percent_trimmed Kallisto_fragment_length Kallisto_percent_aligned Kallisto_pseudoaligned_reads Bismark_aligned_reads Bismark_percent_aligned Bowtie 2_overall_alignment_rate HISAT2_overall_alignment_rate STAR_uniquely_mapped_percent STAR_uniquely_mapped Tophat_overall_aligned_percent Tophat_aligned_not_multimapped_discordant 1 Sample Cutadapt_percent_trimmed-1 Kallisto_percent_aligned-1-1 Kallisto_pseudoaligned_reads-1 Kallisto_fragment_length-1 Bismark_aligned_reads-1 Bismark_percent_aligned-2 Bowtie 2_overall_alignment_rate-1-1 HiCExplorer_Pairs_considered-1 HiCExplorer_Min_rest_site_distance-1 HiCExplorer_Mapped-1 HiCExplorer_Max_rest_site_distance-1 HiCExplorer_Pairs_used-1 HISAT2_overall_alignment_rate-2 STAR_uniquely_mapped_percent-1 STAR_uniquely_mapped-1 Tophat_overall_aligned_percent-1 Tophat_aligned_not_multimapped_discordant-1
2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165 2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165
3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 167.866 83.65114569077758 48531088.0 3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 83.65114569077758 48531088.0 167.866
4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073 4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073
5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645 5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645
6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 169.418 84.50278473550448 59280920.0 6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 84.50278473550448 59280920.0 169.418
7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055 7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055
8 bismark_SE_report 220558.0 69.71079996207212 8 align_0 220558.0 69.71079996207212
9 bowtie2_1 98.33 9 bowtie2_1 98.33
10 bowtie2_2 98.31 10 bowtie2_2 98.31
11 hisat2_1 96.15 11 hicexplorer_3_small_test 99983.0 303.0 0.08778492343698428 800.0 0.3732734564876029
12 hisat2_2 96.15 12 hicexplorer_3_small_test_rf 99983.0 152.0 0.08778492343698428 1500.0 0.35940109818669175
13 star_log 89.0 89.0 13 hisat2_1 96.15
14 tophat_align 99.5 307733.0 14 hisat2_2 96.15
15 star_log 89.0 89.0
16 tophat 99.5 307733.0