Mercurial > repos > iuc > multiqc
diff test-data/porechop.log @ 27:7591bce96601 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 327834d2ea9b16f0f0264fa4e9b675a2277f2fee
| author | iuc |
|---|---|
| date | Tue, 18 Feb 2025 23:18:25 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/porechop.log Tue Feb 18 23:18:25 2025 +0000 @@ -0,0 +1,153 @@ + +[1m[4mLoading reads[0m +/tmp/tmp4zxnky4h/files/5/c/1/dataset_5c125cad-e633-41bc-8f37-36d6af3f5f0f.dat +9 reads loaded + + +[1m[4mLooking for known adapter sets[0m + 0 / 9 (0.0%) 9 / 9 (100.0%) 9 / 9 (100.0%) + Best [0m + read Best [0m + start read end[0m + [4mSet %ID %ID [0m + [32mSQK-NSK007 96.4 95.5[0m + Rapid 62.5 0.0 + RBK004_upstream 72.7 0.0 + SQK-MAP006 62.2 63.6 + SQK-MAP006 short 60.7 60.0 + PCR adapters 1 66.7 73.9 + PCR adapters 2 66.7 63.6 + PCR adapters 3 68.0 72.0 + 1D^2 part 1 62.1 58.8 + 1D^2 part 2 79.4 68.8 + cDNA SSP 57.1 61.4 + Barcode 1 (reverse) 59.4 66.7 + Barcode 2 (reverse) 66.7 63.0 + Barcode 3 (reverse) 69.2 72.0 + Barcode 4 (reverse) 66.7 63.3 + Barcode 5 (reverse) 62.5 66.7 + Barcode 6 (reverse) 73.1 62.5 + Barcode 7 (reverse) 65.4 65.5 + Barcode 8 (reverse) 69.2 58.3 + Barcode 9 (reverse) 75.0 66.7 + Barcode 10 (reverse) 62.5 60.0 + Barcode 11 (reverse) 69.2 60.5 + Barcode 12 (reverse) 65.6 64.0 + Barcode 1 (forward) 65.4 61.5 + Barcode 2 (forward) 69.2 70.4 + Barcode 3 (forward) 73.1 68.0 + Barcode 4 (forward) 73.1 64.3 + Barcode 5 (forward) 62.5 66.7 + Barcode 6 (forward) 65.5 65.6 + Barcode 7 (forward) 73.1 66.7 + Barcode 8 (forward) 62.1 60.7 + Barcode 9 (forward) 68.0 70.8 + Barcode 10 (forward) 69.2 66.7 + Barcode 11 (forward) 65.4 60.7 + Barcode 12 (forward) 64.3 66.7 + Barcode 13 (forward) 64.3 69.2 + Barcode 14 (forward) 63.3 66.7 + Barcode 15 (forward) 66.7 66.7 + Barcode 16 (forward) 70.8 65.5 + Barcode 17 (forward) 69.2 66.7 + Barcode 18 (forward) 70.4 70.4 + Barcode 19 (forward) 65.5 64.0 + Barcode 20 (forward) 65.5 64.0 + Barcode 21 (forward) 64.3 66.7 + Barcode 22 (forward) 69.2 68.0 + Barcode 23 (forward) 61.5 66.7 + Barcode 24 (forward) 66.7 65.4 + Barcode 25 (forward) 64.0 65.5 + Barcode 26 (forward) 72.0 72.0 + Barcode 27 (forward) 77.8 60.7 + Barcode 28 (forward) 65.5 66.7 + Barcode 29 (forward) 62.5 66.7 + Barcode 30 (forward) 68.0 65.4 + Barcode 31 (forward) 62.5 69.2 + Barcode 32 (forward) 68.0 70.8 + Barcode 33 (forward) 62.5 70.4 + Barcode 34 (forward) 64.0 62.5 + Barcode 35 (forward) 65.5 65.4 + Barcode 36 (forward) 63.0 63.0 + Barcode 37 (forward) 67.9 64.3 + Barcode 38 (forward) 64.0 62.1 + Barcode 39 (forward) 64.0 69.2 + Barcode 40 (forward) 62.5 64.0 + Barcode 41 (forward) 68.0 65.5 + Barcode 42 (forward) 70.4 69.2 + Barcode 43 (forward) 63.3 63.3 + Barcode 44 (forward) 60.0 66.7 + Barcode 45 (forward) 73.1 65.4 + Barcode 46 (forward) 65.4 60.7 + Barcode 47 (forward) 65.5 64.0 + Barcode 48 (forward) 71.4 62.1 + Barcode 49 (forward) 69.2 62.1 + Barcode 50 (forward) 66.7 63.0 + Barcode 51 (forward) 69.2 64.3 + Barcode 52 (forward) 66.7 64.0 + Barcode 53 (forward) 67.9 69.0 + Barcode 54 (forward) 69.2 64.0 + Barcode 55 (forward) 66.7 73.1 + Barcode 56 (forward) 66.7 72.0 + Barcode 57 (forward) 69.0 60.0 + Barcode 58 (forward) 70.4 72.0 + Barcode 59 (forward) 56.7 66.7 + Barcode 60 (forward) 66.7 66.7 + Barcode 61 (forward) 70.8 65.5 + Barcode 62 (forward) 66.7 68.0 + Barcode 63 (forward) 66.7 60.7 + Barcode 64 (forward) 69.2 66.7 + Barcode 65 (forward) 61.5 69.0 + Barcode 66 (forward) 64.3 63.0 + Barcode 67 (forward) 66.7 67.9 + Barcode 68 (forward) 67.9 69.2 + Barcode 69 (forward) 69.2 75.0 + Barcode 70 (forward) 64.3 73.1 + Barcode 71 (forward) 64.0 71.4 + Barcode 72 (forward) 66.7 62.1 + Barcode 73 (forward) 67.7 64.0 + Barcode 74 (forward) 64.5 68.0 + Barcode 75 (forward) 65.4 65.5 + Barcode 76 (forward) 70.4 70.8 + Barcode 77 (forward) 65.4 64.3 + Barcode 78 (forward) 67.7 63.0 + Barcode 79 (forward) 70.8 69.2 + Barcode 80 (forward) 71.4 72.0 + Barcode 81 (forward) 68.0 66.7 + Barcode 82 (forward) 64.7 66.7 + Barcode 83 (forward) 69.2 68.0 + Barcode 84 (forward) 70.8 67.9 + Barcode 85 (forward) 61.5 60.0 + Barcode 86 (forward) 64.3 65.4 + Barcode 87 (forward) 66.7 65.4 + Barcode 88 (forward) 63.3 60.7 + Barcode 89 (forward) 69.2 66.7 + Barcode 90 (forward) 66.7 64.0 + Barcode 91 (forward) 68.0 64.3 + Barcode 92 (forward) 65.5 68.0 + Barcode 93 (forward) 69.2 73.1 + Barcode 94 (forward) 63.0 68.0 + Barcode 95 (forward) 64.0 63.3 + Barcode 96 (forward) 69.0 68.0 + + +[1m[4mTrimming adapters from read ends[0m + SQK-NSK007_Y_Top: [31mAATGTACTTCGTTCAGTTACGTATTGCT[0m + SQK-NSK007_Y_Bottom: [31mGCAATACGTAACTGAACGAAGT[0m + + 0 / 9 (0.0%) 9 / 9 (100.0%) 9 / 9 (100.0%) + +4 / 9 reads had adapters trimmed from their start (74 bp removed) +3 / 9 reads had adapters trimmed from their end (49 bp removed) + + +[1m[4mSplitting reads containing middle adapters[0m + 0 / 9 (0.0%) 9 / 9 (100.0%) 10 / 9 (111.1%) 9 / 9 (100.0%) + +4 / 9 reads were split based on middle adapters + + +[1m[4mSaving trimmed reads to file[0m + +Saved result to /tmp/tmp4zxnky4h/job_working_directory/000/2/working/out.fasta +