Mercurial > repos > iuc > multiqc
view test-data/hicexplorer2.log @ 24:f7e2f1eb3a16 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit dffbb5d421a5a5773bcb7f05933b12c45461bb58
| author | iuc |
|---|---|
| date | Mon, 02 Sep 2024 14:22:54 +0000 |
| parents | 01237d721a9f |
| children |
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File small_test_rf_matrix.h5 Pairs considered 99983 Min rest. site distance 152 Max rest. site distance 1500 # count (percentage w.r.t. total sequenced reads) Pairs mappable, unique and high quality 52726 (52.73) Pairs used 35934 (35.94) One mate unmapped 8777 (8.78) One mate not unique 3603 (3.60) One mate low quality 34877 (34.88) # count (percentage w.r.t. mappable, unique and high quality pairs) dangling end 209 (0.40) self ligation (removed) 5056 (9.59) One mate not close to rest site 751 (1.42) same fragment (800 bp) 10146 (19.24) self circle 618 (1.17) duplicated pairs 12 (0.02) # count (percentage w.r.t. total valid pairs used) inter chromosomal 5849 (16.28) short range < 20kb 8071 (22.46) long range 22014 (61.26) inward pairs 6977 (19.42) outward pairs 8907 (24.79) left pairs 7012 (19.51) right pairs 7189 (20.01)