Mercurial > repos > iuc > mummer_mummerplot

changeset 1:c0cedc12fcc5 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mummer4 commit 96608e94742d17cb73d57201099ff5f5abbef276"
author iuc
date Fri, 24 Jan 2020 15:58:02 -0500
parents e8c60daa41e0
children ebe3b0f84de9
files macros.xml mummerplot.xml
diffstat 2 files changed, 8 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Wed Dec 05 02:36:43 2018 -0500
+++ b/macros.xml	Fri Jan 24 15:58:02 2020 -0500
@@ -1,4 +1,5 @@
 <macros>
+    <token name="@MUMMER_GNUPLOT_MANUAL@"><![CDATA[&& gnuplot < out.gp]]></token>
     <xml name="citation">
         <citations>
             <citation type="bibtex">
@@ -12,7 +13,11 @@
             }</citation>
         </citations>
     </xml>
+    <xml name="gnuplot_requirement">
+        <requirement type="package" version="5.2.7">gnuplot</requirement>
+    </xml>
     <token name="@MUMMER_VERSION@">4.0.0beta2</token>
+    <token name="@WRAPPER_VERSION@">+galaxy0</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@MUMMER_VERSION@">mummer4</requirement>
--- a/mummerplot.xml	Wed Dec 05 02:36:43 2018 -0500
+++ b/mummerplot.xml	Fri Jan 24 15:58:02 2020 -0500
@@ -1,10 +1,10 @@
-<tool id="mummer_mummerplot" name="Mummerplot" version="@MUMMER_VERSION@">
+<tool id="mummer_mummerplot" name="Mummerplot" version="@MUMMER_VERSION@@WRAPPER_VERSION@">
     <description>Generate 2-D dotplot of aligned sequences</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="5.2.3">gnuplot</requirement>
+        <expand macro="gnuplot_requirement"/>
     </expand>
     <command detect_errors="exit_code">
         <![CDATA[
@@ -34,6 +34,7 @@
                 -y [$range.min_y:$range.max_y]
             #end if
             '$delta'
+            @MUMMER_GNUPLOT_MANUAL@
         ]]>
     </command>
     <inputs>