Mercurial > repos > iuc > nanoplot

diff test-data/NanoStats.txt @ 2:acd337269171 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit fae386db359dd61fd5e4e2e808413ae478b279ee
author iuc
date Thu, 20 Jun 2019 10:18:48 -0400
parents db1eeffba23e
children a3c4fe6f49ab
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--- a/test-data/NanoStats.txt	Tue Oct 23 08:30:58 2018 -0400
+++ b/test-data/NanoStats.txt	Thu Jun 20 10:18:48 2019 -0400
@@ -1,27 +1,6 @@
-General summary:	 
-Active channels:	169
-Mean read length:	23212.6
-Mean read quality:	10.1
-Median read length:	9390.0
-Median read quality:	10.3
-Number of reads:	371
-Read length N50:	60395
-Total bases:	8611871
-Number, percentage and megabases of reads above quality cutoffs
->Q5:	371 (100.0%) 8.6Mb
->Q7:	371 (100.0%) 8.6Mb
->Q10:	207 (55.8%) 4.7Mb
->Q12:	49 (13.2%) 0.9Mb
->Q15:	0 (0.0%) 0.0Mb
-Top 5 highest mean basecall quality scores and their read lengths
-1:	13.3 (6333)
-2:	13.1 (5448)
-3:	12.9 (27834)
-4:	12.8 (20351)
-5:	12.8 (97730)
-Top 5 longest reads and their mean basecall quality score
-1:	393431 (10.6)
-2:	341725 (11.8)
-3:	320662 (8.0)
-4:	226843 (9.1)
-5:	221901 (10.0)
+General summary:        
+Mean read length:           2,564.9
+Median read length:         1,910.0
+Number of reads:                9.0
+Read length N50:            4,275.0
+Total bases:               23,084.0