--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/einfo.xml	Tue Mar 22 22:30:36 2022 +0000
@@ -0,0 +1,104 @@
+<tool id="ncbi_entrez_direct_einfo" name="NCBI EInfo" version="@TOOL_VERSION@">
+  <description>fetch NCBI database metadata</description>
+  <macros>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="requirements"/>
+  <version_command>einfo -version</version_command>
+  <command detect_errors="exit_code"><![CDATA[
+      @ECONTACT@
+      einfo
+      #if str( $db.target ) == "dbs":
+          -dbs
+      #else:
+          -db "${db.db}"
+      #end if
+      > '${output_xml}'
+      ]]>  
+</command>
+  <inputs>
+      <conditional name="db">
+          <param name="target" type="select" label="List DBs or Info on a DB">
+              <option value="db" selected="True">DB info</option>
+              <option value="dbs">List of DBs</option>
+          </param>
+          <when value="dbs"/>
+          <when value="db">
+              <param name="db" type="select" label="Choose your DB" argument="-db">
+                  <option value="annotinfo">annotinfo</option>
+                  <option value="assembly">assembly</option>
+                  <option value="bioproject">bioproject</option>
+                  <option value="biosample">biosample</option>
+                  <option value="biosystems">biosystems</option>
+                  <option value="blastdbinfo">blastdbinfo</option>
+                  <option value="books">books</option>
+                  <option value="cdd">cdd</option>
+                  <option value="clinvar">clinvar</option>
+                  <option value="clone">clone</option>
+                  <option value="dbvar">dbvar</option>
+                  <option value="gap">gap</option>
+                  <option value="gapplus">gapplus</option>
+                  <option value="gds">gds</option>
+                  <option value="gencoll">gencoll</option>
+                  <option value="gene">gene</option>
+                  <option value="genome">genome</option>
+                  <option value="geoprofiles">geoprofiles</option>
+                  <option value="grasp">grasp</option>
+                  <option value="gtr">gtr</option>
+                  <option value="homologene">homologene</option>
+                  <option value="medgen">medgen</option>
+                  <option value="mesh">mesh</option>
+                  <option value="ncbisearch">ncbisearch</option>
+                  <option value="nlmcatalog">nlmcatalog</option>
+                  <option value="nuccore">nuccore</option>
+                  <option value="nucest">nucest</option>
+                  <option value="nucgss">nucgss</option>
+                  <option value="nucleotide">nucleotide</option>
+                  <option value="omim">omim</option>
+                  <option value="orgtrack">orgtrack</option>
+                  <option value="pcassay">pcassay</option>
+                  <option value="pccompound">pccompound</option>
+                  <option value="pcsubstance">pcsubstance</option>
+                  <option value="pmc">pmc</option>
+                  <option value="popset">popset</option>
+                  <option value="probe">probe</option>
+                  <option value="protein">protein</option>
+                  <option value="proteinclusters">proteinclusters</option>
+                  <option value="pubmed">pubmed</option>
+                  <option value="pubmedhealth">pubmedhealth</option>
+                  <option value="seqannot">seqannot</option>
+                  <option value="snp">snp</option>
+                  <option value="sra">sra</option>
+                  <option value="structure">structure</option>
+                  <option value="taxonomy">taxonomy</option>
+                  <option value="unigene">unigene</option>
+              </param>
+          </when>
+      </conditional>
+  </inputs>
+  <outputs>
+    <data format="xml" name="output_xml"/>
+  </outputs>
+  <tests>
+    <test>
+      <param name="db|target" value="db"/>
+      <param name="db|db" value="sra"/>
+      <output name="output_xml">
+          <assert_contents>
+              <has_text_matching expression="SRA" />
+          </assert_contents>
+      </output>
+    </test>
+  </tests>
+  <help><![CDATA[
+NCBI Entrez EInfo
+=================
+
+Provides the number of records indexed in each field of a given database, the
+date of the last update of the database, and the available links from the
+database to other Entrez databases.
+
+@DISCLAIMER@
+      ]]></help>
+  <expand macro="citations"/>
+</tool>