Mercurial > repos > iuc > ngsderive_strandedness

annotate test-data/strandedness_test.gtf @ 0:bb8409cb3005 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
author iuc
date Fri, 09 Jan 2026 09:57:07 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
1 chr1 test gene 1000 2000 . + . gene_id "GENE_PLUS_1"; gene_name "GENE_PLUS_1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
2 chr1 test transcript 1000 2000 . + . gene_id "GENE_PLUS_1"; transcript_id "GENE_PLUS_1.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
3 chr1 test exon 1000 2000 . + . gene_id "GENE_PLUS_1"; transcript_id "GENE_PLUS_1.1"; exon_number "1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
4 chr1 test gene 3000 4000 . - . gene_id "GENE_MINUS_1"; gene_name "GENE_MINUS_1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
5 chr1 test transcript 3000 4000 . - . gene_id "GENE_MINUS_1"; transcript_id "GENE_MINUS_1.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
6 chr1 test exon 3000 4000 . - . gene_id "GENE_MINUS_1"; transcript_id "GENE_MINUS_1.1"; exon_number "1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
7 chr1 test gene 5000 6000 . + . gene_id "GENE_PLUS_2"; gene_name "GENE_PLUS_2";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
8 chr1 test transcript 5000 6000 . + . gene_id "GENE_PLUS_2"; transcript_id "GENE_PLUS_2.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
9 chr1 test exon 5000 6000 . + . gene_id "GENE_PLUS_2"; transcript_id "GENE_PLUS_2.1"; exon_number "1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
10 chr1 test gene 7000 8000 . - . gene_id "GENE_MINUS_2"; gene_name "GENE_MINUS_2";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
11 chr1 test transcript 7000 8000 . - . gene_id "GENE_MINUS_2"; transcript_id "GENE_MINUS_2.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
12 chr1 test exon 7000 8000 . - . gene_id "GENE_MINUS_2"; transcript_id "GENE_MINUS_2.1"; exon_number "1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
13 chr1 test gene 9000 10000 . + . gene_id "GENE_PLUS_3"; gene_name "GENE_PLUS_3";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
14 chr1 test transcript 9000 10000 . + . gene_id "GENE_PLUS_3"; transcript_id "GENE_PLUS_3.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
15 chr1 test exon 9000 10000 . + . gene_id "GENE_PLUS_3"; transcript_id "GENE_PLUS_3.1"; exon_number "1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
16 chr1 test gene 11000 12000 . - . gene_id "GENE_MINUS_3"; gene_name "GENE_MINUS_3";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
17 chr1 test transcript 11000 12000 . - . gene_id "GENE_MINUS_3"; transcript_id "GENE_MINUS_3.1";
bb8409cb3005 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
iuc
parents:
diff changeset
18 chr1 test exon 11000 12000 . - . gene_id "GENE_MINUS_3"; transcript_id "GENE_MINUS_3.1"; exon_number "1";