view test-data/strandedness_test.gtf @ 0:bb8409cb3005 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ngsderive commit 431830f24865316ab81526f053c171abf9f09529
author iuc
date Fri, 09 Jan 2026 09:57:07 +0000
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chr1	test	gene	1000	2000	.	+	.	gene_id "GENE_PLUS_1"; gene_name "GENE_PLUS_1";
chr1	test	transcript	1000	2000	.	+	.	gene_id "GENE_PLUS_1"; transcript_id "GENE_PLUS_1.1";
chr1	test	exon	1000	2000	.	+	.	gene_id "GENE_PLUS_1"; transcript_id "GENE_PLUS_1.1"; exon_number "1";
chr1	test	gene	3000	4000	.	-	.	gene_id "GENE_MINUS_1"; gene_name "GENE_MINUS_1";
chr1	test	transcript	3000	4000	.	-	.	gene_id "GENE_MINUS_1"; transcript_id "GENE_MINUS_1.1";
chr1	test	exon	3000	4000	.	-	.	gene_id "GENE_MINUS_1"; transcript_id "GENE_MINUS_1.1"; exon_number "1";
chr1	test	gene	5000	6000	.	+	.	gene_id "GENE_PLUS_2"; gene_name "GENE_PLUS_2";
chr1	test	transcript	5000	6000	.	+	.	gene_id "GENE_PLUS_2"; transcript_id "GENE_PLUS_2.1";
chr1	test	exon	5000	6000	.	+	.	gene_id "GENE_PLUS_2"; transcript_id "GENE_PLUS_2.1"; exon_number "1";
chr1	test	gene	7000	8000	.	-	.	gene_id "GENE_MINUS_2"; gene_name "GENE_MINUS_2";
chr1	test	transcript	7000	8000	.	-	.	gene_id "GENE_MINUS_2"; transcript_id "GENE_MINUS_2.1";
chr1	test	exon	7000	8000	.	-	.	gene_id "GENE_MINUS_2"; transcript_id "GENE_MINUS_2.1"; exon_number "1";
chr1	test	gene	9000	10000	.	+	.	gene_id "GENE_PLUS_3"; gene_name "GENE_PLUS_3";
chr1	test	transcript	9000	10000	.	+	.	gene_id "GENE_PLUS_3"; transcript_id "GENE_PLUS_3.1";
chr1	test	exon	9000	10000	.	+	.	gene_id "GENE_PLUS_3"; transcript_id "GENE_PLUS_3.1"; exon_number "1";
chr1	test	gene	11000	12000	.	-	.	gene_id "GENE_MINUS_3"; gene_name "GENE_MINUS_3";
chr1	test	transcript	11000	12000	.	-	.	gene_id "GENE_MINUS_3"; transcript_id "GENE_MINUS_3.1";
chr1	test	exon	11000	12000	.	-	.	gene_id "GENE_MINUS_3"; transcript_id "GENE_MINUS_3.1"; exon_number "1";