Mercurial > repos > iuc > obi_stat
annotate macros.xml @ 0:ee9cd37c2f3d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
| author | iuc |
|---|---|
| date | Wed, 12 Apr 2017 17:38:35 -0400 |
| parents | |
| children | 65bb66b261e3 |
| rev | line source |
|---|---|
|
0
ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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1 <?xml version="1.0"?> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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2 <macros> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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3 <xml name="requirements"> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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4 <requirements> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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5 <requirement type="package" version="1.0.010">obitools</requirement> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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6 </requirements> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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7 </xml> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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8 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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9 <token name="@WRAPPER_VERSION@">1.0.010</token> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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10 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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11 <xml name="stdio"> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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12 <stdio> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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13 <exit_code range="1:" level="fatal" description="Error in Obitools execution" /> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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14 </stdio> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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15 </xml> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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16 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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17 <token name="@OBITOOLS_LINK@"> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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18 <![CDATA[ |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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19 -------- |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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20 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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21 **Project links:** |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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22 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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23 `OBITools`_ |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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24 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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25 .. _OBITools: http://metabarcoding.org/obitools/ |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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26 ]]> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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27 </token> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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28 |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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29 <xml name="attributes"> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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30 <option value="ali_dir" selected="true">ali_dir</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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31 <option value="ali_length">ali_length</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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32 <option value="avg_quality">avg_quality</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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33 <option value="best_match">best_match</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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34 <option value="best_identity">best_identity</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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35 <option value="class">class</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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36 <option value="cluster">cluster</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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37 <option value="complemented">complemented</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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38 <option value="count">count</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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39 <option value="cut">cut</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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40 <option value="direction">direction</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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41 <option value="distance">distance</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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42 <option value="error">error</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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43 <option value="experiment">experiment</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
diff
changeset
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44 <option value="family">family</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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45 <option value="family_name">family_name</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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46 <option value="forward_error">forward_error</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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47 <option value="forward_match">forward_match</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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48 <option value="forward_primer">forward_primer</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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49 <option value="forward_score">forward_score</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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50 <option value="forward_tag">forward_tag</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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51 <option value="forward_tm">forward_tm</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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52 <option value="genus">genus</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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53 <option value="genus_name">genus_name</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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54 <option value="head_quality">head_quality</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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55 <option value="id_status">id_status</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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56 <option value="merged_star">merged_star</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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57 <option value="merged">merged</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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58 <option value="mid_quality">mid_quality</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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59 <option value="mode">mode</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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60 <option value="obiclean_cluster">obiclean_cluster</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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61 <option value="obiclean_count">obiclean_count</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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62 <option value="obiclean_head">obiclean_head</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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63 <option value="obiclean_headcount">obiclean_headcount</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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64 <option value="obiclean_internalcount">obiclean_internalcount</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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65 <option value="obiclean_samplecount">obiclean_samplecount</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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66 <option value="obiclean_singletoncount">obiclean_singletoncount</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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67 <option value="obiclean_status">obiclean_status</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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68 <option value="occurrence">occurrence</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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69 <option value="order">order</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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70 <option value="order_name">order_name</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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71 <option value="pairend_limit ">pairend_limit </option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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72 <option value="partial ">partial </option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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73 <option value="rank">rank</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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74 <option value="reverse_error">reverse_error</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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75 <option value="reverse_match">reverse_match</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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76 <option value="reverse_primer">reverse_primer</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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77 <option value="reverse_score">reverse_score</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
parents:
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changeset
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78 <option value="reverse_tag">reverse_tag</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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79 <option value="reverse_tm">reverse_tm</option> |
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ee9cd37c2f3d
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80 <option value="sample">sample</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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81 <option value="scientific_name">scientific_name</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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82 <option value="score">score</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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83 <option value="score_norm">score_norm</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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84 <option value="select">select</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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85 <option value="seq_ab_match">seq_ab_match</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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86 <option value="seq_a_single">seq_a_single</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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87 <option value="seq_a_mismatch">seq_a_mismatch</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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88 <option value="seq_a_deletion">seq_a_deletion</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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89 <option value="seq_a_insertion">seq_a_insertion</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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90 <option value="seq_b_single">seq_b_single</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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91 <option value="seq_b_mismatch">seq_b_mismatch</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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92 <option value="seq_b_deletion">seq_b_deletion</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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93 <option value="seq_b_insertion">seq_b_insertion</option> |
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ee9cd37c2f3d
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94 <option value="seq_length">seq_length</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
iuc
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95 <option value="seq_length_ori">seq_length_ori</option> |
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ee9cd37c2f3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/obitools commit e1031e4c94b25d1ed535bf221764ab801b710ab2
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96 <option value="seq_rank">seq_rank</option> |
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ee9cd37c2f3d
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97 <option value="sminL">sminL</option> |
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ee9cd37c2f3d
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98 <option value="sminR">sminR</option> |
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ee9cd37c2f3d
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99 <option value="species">species</option> |
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100 <option value="species_list">species_list</option> |
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ee9cd37c2f3d
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101 <option value="species_name">species_name</option> |
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ee9cd37c2f3d
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102 <option value="status">status</option> |
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103 <option value="strand">strand</option> |
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104 <option value="tail_quality">tail_quality</option> |
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ee9cd37c2f3d
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105 <option value="taxid">taxid</option> |
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ee9cd37c2f3d
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106 </xml> |
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107 |
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108 <xml name="inputtype"> |
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109 <option value="--genbank">genbank</option> |
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110 <option value="--embl">embl</option> |
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111 <option value="--sanger">sanger</option> |
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112 <option value="--solexa">solexa</option> |
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113 <option value="--ecopcr">ecopcr</option> |
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114 <option value="--ecopcrdb">ecopcrdb</option> |
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115 <option value="--fasta" selected="true">fasta</option> |
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116 </xml> |
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117 |
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118 <xml name="sanitizer"> |
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119 <sanitizer invalid_char="test"> |
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120 <valid initial="default"> |
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121 <!--add value="""/--> |
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122 </valid> |
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123 <mapping initial="default"> |
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124 <add source=">" target="\>"/> |
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125 <add source=""" target="\""/> |
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126 </mapping> |
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127 </sanitizer> |
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128 </xml> |
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129 |
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130 <xml name="citation"> |
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131 <citations> |
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132 <citation type="doi">10.1111/1755-0998.12428</citation> |
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133 </citations> |
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134 </xml> |
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135 |
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136 </macros> |