Mercurial > repos > iuc > onto_tk_get_relationship_id_vs_relationship_namespace
comparison get_relationship_id_vs_relationship_namespace.xml @ 0:08527da0c8a3 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
| author | iuc |
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| date | Fri, 10 Nov 2017 11:32:09 -0500 |
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| children |
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| -1:000000000000 | 0:08527da0c8a3 |
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| 1 <tool id="onto_tk_get_relationship_id_vs_relationship_namespace" name="Get all the relationship IDs and namespaces" version="@VERSION@.0"> | |
| 2 <description>from the given OBO ontology</description> | |
| 3 <macros> | |
| 4 <import>onto_macros.xml</import> | |
| 5 </macros> | |
| 6 <expand macro="requirements" /> | |
| 7 <command detect_errors="aggressive"> | |
| 8 get_relationship_id_vs_relationship_namespace.pl | |
| 9 -f '$input' > '$output' | |
| 10 </command> | |
| 11 <inputs> | |
| 12 <expand macro="input_ontology" /> | |
| 13 </inputs> | |
| 14 <outputs> | |
| 15 <data format="tabular" name="output" label="Relationship IDs and namespace of ${on_string}"> | |
| 16 <actions> | |
| 17 <action name="column_names" type="metadata" default="releationship ID,releationship namespace" /> | |
| 18 </actions> | |
| 19 </data> | |
| 20 </outputs> | |
| 21 <tests> | |
| 22 <test> | |
| 23 <param name="input" value="pre_cco_core.obo"/> | |
| 24 <output name="output" file="relationship_id_vs_relationship_namespace.tab"/> | |
| 25 </test> | |
| 26 </tests> | |
| 27 <help> | |
| 28 | |
| 29 .. class:: infomark | |
| 30 | |
| 31 Generates a flat file with two columns (TAB separated) with the relationship_id and relationship_namespace from the elements of the given OBO ontology. | |
| 32 | |
| 33 </help> | |
| 34 <expand macro="citations" /> | |
| 35 </tool> | |
| 36 |