Mercurial > repos > iuc > package_bedtools_2_18
comparison tool_dependencies.xml @ 0:8b168d35d56b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_18 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
| author | iuc |
|---|---|
| date | Tue, 19 May 2015 14:57:11 -0400 |
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| children |
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| -1:000000000000 | 0:8b168d35d56b |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="bedtools2" version="2.18.2"> | |
| 4 <install version="1.0"> | |
| 5 <actions> | |
| 6 <action type="shell_command">git clone --recursive https://github.com/arq5x/bedtools2.git</action> | |
| 7 <action type="shell_command">git reset --hard 393fc3b9b766c76cc62e3f0df4e59ffbff3a55fb</action> | |
| 8 <action type="shell_command">make</action> | |
| 9 <action type="move_directory_files"> | |
| 10 <source_directory>bin</source_directory> | |
| 11 <destination_directory>$INSTALL_DIR/bin</destination_directory> | |
| 12 </action> | |
| 13 <action type="set_environment"> | |
| 14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 15 </action> | |
| 16 </actions> | |
| 17 </install> | |
| 18 <readme> | |
| 19 BEDTools is a collection of utilities for comparing, summarizing, and intersecting genomic features in BED, GTF/GFF, VCF and BAM formats. | |
| 20 https://github.com/arq5x/bedtools2 | |
| 21 </readme> | |
| 22 </package> | |
| 23 </tool_dependency> | |
| 24 | |
| 25 | |
| 26 |