Mercurial > repos > iuc > package_bioconductor_edger_3_14_0

changeset 0:8ed6cfd2b21f draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/packages/package_bioconductor_edger_3_14_0 commit 6dad4ca6483946af64f484feaff78ac9d1d87352
author iuc
date Mon, 20 Jun 2016 11:43:56 -0400
parents
children 5f4abad5b2c1
files tool_dependencies.xml
diffstat 1 files changed, 26 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Jun 20 11:43:56 2016 -0400
@@ -0,0 +1,26 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.2.1">
+        <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="bioconductor-edger" version="3.14.0">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.2.1" />
+                    </repository>
+                    <package sha256sum="96b3c01e2c6709ee8fb4c43583b22ea0a6f32624b73a9c05d74cac4c443ad342">
+                        https://depot.galaxyproject.org/software/limma/limma_3.28.2_src_all.tar.gz
+                    </package>
+                    <package sha256sum="766a5d1f8e66d28b0c4cc70a72aaa1c5a32047def34d72957ab6fc7cfcf37993">
+                        https://depot.galaxyproject.org/software/edgeR/edgeR_3.14.0_src_all.tar.gz
+                    </package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
+        </readme>
+    </package>
+</tool_dependency>