Mercurial > repos > iuc > package_bwa_0_7_12

annotate tool_dependencies.xml @ 0:6af9b24ddeee draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
author iuc
date Thu, 03 Dec 2015 17:37:31 -0500
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6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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1 <?xml version="1.0"?>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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2 <tool_dependency>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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3 <package name="bwa" version="0.7.12">
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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4 <install version="1.0">
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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5 <actions>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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6 <action type="download_by_url" md5sum="075704634146ec8cc7543c0dee8960e7">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.7.12.tar.bz2</action>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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7 <action type="shell_command">make</action>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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8 <action type="move_file">
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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9 <source>bwa</source>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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10 <destination>$INSTALL_DIR/bin</destination>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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11 </action>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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12 <action type="set_environment">
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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14 </action>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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15 </actions>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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16 </install>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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17 </package>
6af9b24ddeee planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bwa_0_7_12 commit 6eaf4336ff90294e503dedf930ccbe31f8b4efe9
iuc
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18 </tool_dependency>