Mercurial > repos > iuc > package_cummerbund_2_8_2
annotate tool_dependencies.xml @ 1:271dd1fcbb47 draft
Uploaded tool dependency that downloads digest from depot.galaxyproject.org.
| author | devteam |
|---|---|
| date | Wed, 07 Jan 2015 15:36:21 -0500 |
| parents | 5aacc6d160ed |
| children | d9d166e54a21 |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | |
| 3 <package name="R" version="3.1.2"> | |
| 4 <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 <package name="cummeRbund" version="2.8.2"> | |
| 7 <install version="1.0"> | |
| 8 <actions> | |
| 9 <action type="setup_r_environment"> | |
| 10 <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
| 11 <package name="R" version="3.1.2" /> | |
| 12 </repository> | |
| 13 <package>http://cran.r-project.org/src/contrib/DBI_0.3.1.tar.gz</package> | |
| 14 <package>http://cran.r-project.org/src/contrib/bitops_1.0-6.tar.gz</package> | |
| 15 <package>http://cran.r-project.org/src/contrib/RCurl_1.95-4.5.tar.gz</package> | |
| 16 <package>http://cran.r-project.org/src/contrib/XML_3.98-1.1.tar.gz</package> | |
| 17 <package>http://cran.r-project.org/src/contrib/RSQLite_1.0.0.tar.gz</package> | |
|
1
271dd1fcbb47
Uploaded tool dependency that downloads digest from depot.galaxyproject.org.
devteam
parents:
0
diff
changeset
|
18 <package>https://depot.galaxyproject.org/package/noarch/digest_0.6.7.tar.gz</package> |
| 0 | 19 <package>http://cran.r-project.org/src/contrib/Rcpp_0.11.3.tar.gz</package> |
| 20 <package>http://cran.r-project.org/src/contrib/plyr_1.8.1.tar.gz</package> | |
| 21 <package>http://cran.r-project.org/src/contrib/gtable_0.1.2.tar.gz</package> | |
| 22 <package>http://cran.r-project.org/src/contrib/proto_0.3-10.tar.gz</package> | |
| 23 <package>http://cran.r-project.org/src/contrib/stringr_0.6.2.tar.gz</package> | |
| 24 <package>http://cran.r-project.org/src/contrib/reshape2_1.4.1.tar.gz</package> | |
| 25 <package>http://cran.r-project.org/src/contrib/RColorBrewer_1.1-2.tar.gz</package> | |
| 26 <package>http://cran.r-project.org/src/contrib/dichromat_2.0-0.tar.gz</package> | |
| 27 <package>http://cran.r-project.org/src/contrib/labeling_0.3.tar.gz</package> | |
| 28 <package>http://cran.r-project.org/src/contrib/colorspace_1.2-4.tar.gz</package> | |
| 29 <package>http://cran.r-project.org/src/contrib/munsell_0.4.2.tar.gz</package> | |
| 30 <package>http://cran.r-project.org/src/contrib/scales_0.2.4.tar.gz</package> | |
| 31 <package>http://cran.r-project.org/src/contrib/ggplot2_1.0.0.tar.gz</package> | |
| 32 <package>http://cran.r-project.org/src/contrib/fastcluster_1.1.13.tar.gz</package> | |
| 33 <package>http://cran.r-project.org/src/contrib/plyr_1.8.1.tar.gz</package> | |
| 34 <package>http://cran.r-project.org/src/contrib/getopt_1.20.0.tar.gz</package> | |
| 35 <package>http://cran.r-project.org/src/contrib/rjson_0.2.15.tar.gz</package> | |
| 36 <package>http://cran.r-project.org/src/contrib/findpython_1.0.1.tar.gz</package> | |
| 37 <package>http://cran.r-project.org/src/contrib/argparse_1.0.1.tar.gz</package> | |
| 38 <package>http://cran.r-project.org/src/contrib/lattice_0.20-29.tar.gz</package> | |
| 39 <package>http://cran.r-project.org/src/contrib/latticeExtra_0.6-26.tar.gz</package> | |
| 40 <package>http://cran.r-project.org/src/contrib/checkmate_1.5.1.tar.gz</package> | |
| 41 <package>http://cran.r-project.org/src/contrib/BBmisc_1.8.tar.gz</package> | |
| 42 <package>http://cran.r-project.org/src/contrib/brew_1.0-6.tar.gz</package> | |
| 43 <package>http://cran.r-project.org/src/contrib/fail_1.2.tar.gz</package> | |
| 44 <package>http://cran.r-project.org/src/contrib/base64enc_0.1-2.tar.gz</package> | |
| 45 <package>http://cran.r-project.org/src/contrib/sendmailR_1.2-1.tar.gz</package> | |
| 46 <package>http://cran.r-project.org/src/contrib/BatchJobs_1.5.tar.gz</package> | |
| 47 <package>http://cran.r-project.org/src/contrib/iterators_1.0.7.tar.gz</package> | |
| 48 <package>http://cran.r-project.org/src/contrib/codetools_0.2-9.tar.gz</package> | |
| 49 <package>http://cran.r-project.org/src/contrib/foreach_1.4.2.tar.gz</package> | |
| 50 <package>http://cran.r-project.org/src/contrib/Formula_1.1-2.tar.gz</package> | |
| 51 <package>http://cran.r-project.org/src/contrib/survival_2.37-7.tar.gz</package> | |
| 52 <package>http://cran.r-project.org/src/contrib/acepack_1.3-3.3.tar.gz</package> | |
| 53 <package>http://cran.r-project.org/src/contrib/Hmisc_3.14-6.tar.gz</package> | |
| 54 <package>http://cran.r-project.org/src/contrib/R.methodsS3_1.6.1.tar.gz</package> | |
| 55 <package>http://cran.r-project.org/src/contrib/matrixStats_0.12.2.tar.gz</package> | |
| 56 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.12.1.tar.gz</package> | |
| 57 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/S4Vectors_0.4.0.tar.gz</package> | |
| 58 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/IRanges_2.0.1.tar.gz</package> | |
| 59 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.2.4.tar.gz</package> | |
| 60 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/XVector_0.6.0.tar.gz</package> | |
| 61 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.18.3.tar.gz</package> | |
| 62 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.12.0.tar.gz</package> | |
| 63 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.34.1.tar.gz</package> | |
| 64 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/Rsamtools_1.18.2.tar.gz</package> | |
| 65 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/BiocParallel_1.0.0.tar.gz</package> | |
| 66 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.26.0.tar.gz</package> | |
| 67 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/AnnotationDbi_1.28.1.tar.gz</package> | |
| 68 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/biomaRt_2.22.0.tar.gz</package> | |
| 69 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/GenomicAlignments_1.2.1.tar.gz</package> | |
| 70 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/rtracklayer_1.26.2.tar.gz</package> | |
| 71 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/BSgenome_1.34.0.tar.gz</package> | |
| 72 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/GenomicFeatures_1.18.3.tar.gz</package> | |
| 73 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/VariantAnnotation_1.12.7.tar.gz</package> | |
| 74 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/biovizBase_1.14.1.tar.gz</package> | |
| 75 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/Gviz_1.10.3.tar.gz</package> | |
| 76 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/cummeRbund_2.8.2.tar.gz</package> | |
| 77 </action> | |
| 78 </actions> | |
| 79 </install> | |
| 80 <readme> | |
| 81 </readme> | |
| 82 </package> | |
| 83 </tool_dependency> |