Mercurial > repos > iuc > package_deseq2_1_8_1

annotate tool_dependencies.xml @ 1:ab759b8c9d86 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit f6ee6a549b9c121ee69914a2fdde392de74e4b19
author iuc
date Wed, 02 Dec 2015 16:18:23 -0500
parents 245e19b70f1d
children
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245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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diff changeset
1 <?xml version="1.0"?>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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2 <tool_dependency>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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3 <package name="R" version="3.2.1">
1
ab759b8c9d86 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit f6ee6a549b9c121ee69914a2fdde392de74e4b19
iuc
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4 <repository changeset_revision="fae49a02a848" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
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245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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5 </package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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6 <package name="libxml2" version="2.9.1">
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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7 <repository changeset_revision="e5475acebd6e" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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8 </package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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9 <package name="deseq2" version="1.8.1">
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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10 <install version="1.0">
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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11 <actions>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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12 <action type="setup_r_environment">
1
ab759b8c9d86 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit f6ee6a549b9c121ee69914a2fdde392de74e4b19
iuc
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13 <repository changeset_revision="fae49a02a848" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
0
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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14 <package name="R" version="3.2.1" />
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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15 </repository>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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17 <repository changeset_revision="e5475acebd6e" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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18 <package name="libxml2" version="2.9.1" />
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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19 </repository>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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20 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/BiocGenerics_0.14.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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21 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/S4Vectors_0.6.5.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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22 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/IRanges_2.2.7.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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23 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/GenomeInfoDb_1.4.2.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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24 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/XVector_0.8.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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25 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/GenomicRanges_1.20.6.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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26 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/Rcpp_0.12.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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27 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/RcppArmadillo_0.5.500.2.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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28 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/Biobase_2.28.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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29 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/lambda.r_1.1.7.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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30 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/futile.options_1.0.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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31 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/futile.logger_1.4.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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32 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/snow_0.3-13.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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33 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/BiocParallel_1.2.20.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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34 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/DBI_0.3.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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35 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/RSQLite_1.0.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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36 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/AnnotationDbi_1.30.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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37 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/XML_3.98-1.3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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38 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/xtable_1.7-4.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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39 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/annotate_1.46.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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40 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/survival_2.38-3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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41 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/genefilter_1.50.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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42 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/lattice_0.20-33.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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43 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/locfit_1.5-9.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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44 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/RColorBrewer_1.1-2.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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45 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/geneplotter_1.46.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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46 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/plyr_1.8.3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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47 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/digest_0.6.8.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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48 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/gtable_0.1.2.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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49 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/stringi_0.5-5.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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50 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/magrittr_1.5.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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51 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/stringr_1.0.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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52 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/reshape2_1.4.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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53 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/dichromat_2.0-0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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54 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/colorspace_1.2-6.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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55 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/munsell_0.4.2.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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56 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/labeling_0.3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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57 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/scales_0.3.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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58 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/proto_0.3-10.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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59 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/MASS_7.3-44.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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60 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/ggplot2_1.0.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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61 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/Formula_1.2-1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
iuc
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62 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/latticeExtra_0.6-26.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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63 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/cluster_2.0.3.tar.gz</package>
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64 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/rpart_4.1-10.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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65 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/nnet_7.3-11.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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66 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/acepack_1.3-3.3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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67 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/foreign_0.8-66.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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68 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/gridExtra_2.0.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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69 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/Hmisc_3.16-0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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70 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/DESeq2_1.8.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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71
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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72 <!-- gplots dependency -->
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73 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/gtools_3.4.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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74 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/gdata_2.13.3.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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75 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/bitops_1.0-6.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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76 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/caTools_1.17.1.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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77 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/KernSmooth_2.23-13.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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78 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/gplots_2.14.2.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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79
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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80 <!-- wrapper dependency -->
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81 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_2_10/getopt_1.20.0.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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82 <package>http://cran.r-project.org/src/contrib/Archive/rjson/rjson_0.2.14.tar.gz</package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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83 </action>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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84 <action type="set_environment">
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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85 <environment_variable action="set_to" name="DESEQ2_ROOT_PATH">$INSTALL_DIR</environment_variable>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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86 </action>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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87 </actions>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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88 </install>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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89 <readme>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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90 Differential gene expression analysis based on the negative binomial distribution.
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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91 http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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92 </readme>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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93 </package>
245e19b70f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_1 commit 625a9632df44b1b623941e35c22f71f0e55ee371
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94 </tool_dependency>