Mercurial > repos > iuc > package_eden_1_1

changeset 0:345f50e7572b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 14:57:56 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 39 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue May 19 14:57:56 2015 -0400
@@ -0,0 +1,39 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <!--<package name="boost" version="1.53.0">
+        <repository name="package_boost_1_53" owner="iuc" prior_installation_required="True" />
+    </package>-->
+    <package name="zlib" version="1.2.8">
+        <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="eden" version="1.1">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/EDeN/EDeN-1.1.0.tar.gz</action>
+
+                <!-- populate the environment variables from the dependend repos -->
+                <action type="set_environment_for_install">
+                    <!--repository name="package_boost_1_53" owner="iuc">
+                        <package name="boost" version="1.53.0" />
+                    </repository-->
+                    <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="zlib" version="1.2.8" />
+                    </repository>
+                </action>
+                <!--
+                <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$BOOST_ROOT_DIR/lib/ &amp;&amp; make</action>
+                -->
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>EDeN</source>
+                    <destination>$INSTALL_DIR/bin/</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[BOOST_ROOT_DIR]/lib/</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiling EDeN requires a C++ compiler, usually g++.</readme>
+    </package>
+</tool_dependency>