Mercurial > repos > iuc > package_eden_1_3

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 14:58:03 -0400
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cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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1 <?xml version="1.0"?>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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2 <tool_dependency>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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3 <!--<package name="boost" version="1.53.0">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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4 <repository name="package_boost_1_53" owner="iuc" prior_installation_required="True" />
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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5 </package>-->
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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6 <package name="eden" version="1.3.5">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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7 <install version="1.0">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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8 <actions>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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9 <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/EDeN/EDeN-1.3.5.tar.gz</action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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10
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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11 <!-- populate the environment variables from the dependend repos -->
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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12 <!--<action type="set_environment_for_install">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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13 <repository name="package_boost_1_53" owner="iuc">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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14 <package name="boost" version="1.53.0" />
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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15 </repository>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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16 </action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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18 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$BOOST_ROOT_DIR/lib/ &amp;&amp; make</action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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19 -->
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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20 <action type="shell_command">make</action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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21 <action type="move_file">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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22 <source>EDeN</source>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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23 <destination>$INSTALL_DIR/bin/</destination>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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24 </action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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25 <action type="set_environment">
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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26 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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27 <!--<environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[BOOST_ROOT_DIR]/lib/</environment_variable>-->
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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28 </action>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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29 </actions>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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30 </install>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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31 <readme>Compiling EDeN requires a C++ compiler, usually g++.</readme>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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32 </package>
cb737c0d0641 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_3 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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33 </tool_dependency>