Mercurial > repos > iuc > package_jbrowse_1_11_6

comparison tool_dependencies.xml @ 0:d5ab749c9e97 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
author iuc
date Mon, 04 May 2015 17:19:56 -0400
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children 6cc678412457
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-1:000000000000 0:d5ab749c9e97
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="perl" version="5.18.1">
4 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="jbrowse" version="1.11.6">
7 <install version="1.0">
8 <actions>
9 <action type="download_by_url">http://jbrowse.org/wordpress/wp-content/plugins/download-monitor/download.php?id=99&amp;fmt=.zip</action>
10 <action type="move_directory_files">
11 <source_directory>.</source_directory>
12 <destination_directory>$INSTALL_DIR</destination_directory>
13 </action>
14 <action type="setup_perl_environment">
15 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
16 <package name="perl" version="5.18.1" />
17 </repository>
18
19 <package>https://cpan.metacpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.42.tar.gz</package>
20 <package>https://cpan.metacpan.org/authors/id/L/LE/LEONT/Test-Harness-3.35.tar.gz</package>
21 <package>https://cpan.metacpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.001014.tar.gz</package>
22 <package>https://cpan.metacpan.org/authors/id/M/MA/MAKAMAKA/JSON-2.90.tar.gz</package>
23
24 <package>https://cpan.metacpan.org/authors/id/F/FA/FAYS/Digest-Crc32-0.01.tar.gz</package>
25
26 <package>https://cpan.metacpan.org/authors/id/G/GA/GARU/Clone-0.38.tar.gz</package>
27 <package>https://cpan.metacpan.org/authors/id/R/RE/REHSACK/Hash-Merge-0.200.tar.gz</package>
28
29 <package>https://cpan.metacpan.org/authors/id/S/SA/SAPER/XSLoader-0.16.tar.gz</package>
30 <package>https://cpan.metacpan.org/authors/id/N/NW/NWCLARK/Devel-Size-0.80.tar.gz</package>
31
32 <package>https://cpan.metacpan.org/authors/id/T/TH/THOSPEL/Heap-Simple-0.13.tar.gz</package>
33
34 <package>https://cpan.metacpan.org/authors/id/N/NE/NEILB/Pod-Escapes-1.07.tar.gz</package>
35 <package>https://cpan.metacpan.org/authors/id/J/JE/JESSE/Test-1.26.tar.gz</package>
36 <package>https://cpan.metacpan.org/authors/id/M/MU/MUIR/modules/Text-Tabs+Wrap-2013.0523.tar.gz</package>
37 <package>https://cpan.metacpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.42.tar.gz</package>
38 <package>https://cpan.metacpan.org/authors/id/L/LE/LEONT/Test-Harness-3.35.tar.gz</package>
39 <package>https://cpan.metacpan.org/authors/id/D/DA/DANKOGAI/Encode-2.73.tar.gz</package>
40 <package>https://cpan.metacpan.org/authors/id/D/DW/DWHEELER/Pod-Simple-3.30.tar.gz</package>
41 <package>https://cpan.metacpan.org/authors/id/T/TO/TODDR/Exporter-5.70.tar.gz</package>
42 <package>https://cpan.metacpan.org/authors/id/S/SH/SHAY/perl-5.20.2.tar.gz</package>
43 <package>https://cpan.metacpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.001014.tar.gz</package>
44 <package>https://cpan.metacpan.org/authors/id/C/CO/CORION/parent-0.232.tar.gz</package>
45 <package>https://cpan.metacpan.org/authors/id/D/DL/DLAND/File-Path-2.09.tar.gz</package>
46 <package>https://cpan.metacpan.org/authors/id/S/SA/SAPER/XSLoader-0.16.tar.gz</package>
47 <package>https://cpan.metacpan.org/authors/id/R/RJ/RJBS/Carp-1.36.tar.gz</package>
48 <package>https://cpan.metacpan.org/authors/id/D/DA/DAGOLDEN/File-Temp-0.2304.tar.gz</package>
49 <package>https://cpan.metacpan.org/authors/id/M/MA/MAREKR/Pod-Usage-1.67.tar.gz</package>
50 <package>https://cpan.metacpan.org/authors/id/R/RB/RBUELS/Bio-GFF3-2.0.tar.gz</package>
51
52 <package>https://github.com/bgruening/download_store/raw/master/HeapSimpleXS/Heap-Simple-XS-0.10.tar.gz</package>
53 </action>
54 <action type="set_environment">
55 <environment_variable action="set_to" name="JBROWSE_SOURCE_DIR">$INSTALL_DIR</environment_variable>
56 </action>
57 </actions>
58 </install>
59 <readme>Copy of the JBrowse source code, with dependencies
60 </readme>
61 </package>
62 </tool_dependency>