Mercurial > repos > iuc > package_lapack_3_4

comparison tool_dependencies.xml @ 1:5686c79a72d5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:34:29 -0400
parents 98a7d116c15f
children e87b2acfb5d2
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0:98a7d116c15f 1:5686c79a72d5
3 <install version="1.0"> 3 <install version="1.0">
4 <actions> 4 <actions>
5 <!-- first action is always downloading --> 5 <!-- first action is always downloading -->
6 <action type="download_by_url">http://www.netlib.org/lapack/lapack-3.4.2.tgz</action> 6 <action type="download_by_url">http://www.netlib.org/lapack/lapack-3.4.2.tgz</action>
7 7
8 <action type="shell_command">sed 's/^OPTS\s.*/OPTS = -O2 -fPIC/g' INSTALL/make.inc.gfortran | sed 's/^NOOPT\s.*/OPTS = -O2 -fPIC/g' > make.inc</action>
9 <action type="shell_command">mkdir build</action> 8 <action type="shell_command">mkdir build</action>
10 <action type="shell_command">cd build &amp;&amp; cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack</action> 9 <action type="shell_command">
10 cd build &amp;&amp;
11 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DCMAKE_Fortran_FLAGS='-O2 -fPIC'
12 </action>
11 <action type="shell_command">cd build &amp;&amp; make</action> 13 <action type="shell_command">cd build &amp;&amp; make</action>
12 <action type="shell_command">cd build &amp;&amp; make install</action> 14 <action type="shell_command">cd build &amp;&amp; make install</action>
13 15
14 <action type="set_environment"> 16 <action type="set_environment">
15 <environment_variable name="LAPACK_LIB_DIR" action="set_to">$INSTALL_DIR/lapack/lib</environment_variable> 17 <environment_variable name="LAPACK_LIB_DIR" action="set_to">$INSTALL_DIR/lapack/lib</environment_variable>