annotate tool_dependencies.xml @ 1:5686c79a72d5 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:34:29 -0400
parents 98a7d116c15f
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1 <tool_dependency>
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2 <package name="lapack" version="3.4.2">
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3 <install version="1.0">
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4 <actions>
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5 <!-- first action is always downloading -->
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6 <action type="download_by_url">http://www.netlib.org/lapack/lapack-3.4.2.tgz</action>
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8 <action type="shell_command">mkdir build</action>
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5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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9 <action type="shell_command">
5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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10 cd build &amp;&amp;
5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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11 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DCMAKE_Fortran_FLAGS='-O2 -fPIC'
5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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12 </action>
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13 <action type="shell_command">cd build &amp;&amp; make</action>
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14 <action type="shell_command">cd build &amp;&amp; make install</action>
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15
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16 <action type="set_environment">
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17 <environment_variable name="LAPACK_LIB_DIR" action="set_to">$INSTALL_DIR/lapack/lib</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 <readme>LAPACK requires gcc and gfortran. LAPACK_LIB_DIR will be set (including liblapack.a and libblas.a). </readme>
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22 </package>
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23 </tool_dependency>