Mercurial > repos > iuc > package_legacy_blast_2_2_22

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
author iuc
date Mon, 01 Aug 2016 14:33:09 -0400
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67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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1 <?xml version='1.0' encoding='utf-8'?>
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2 <tool_dependency>
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3 <package name="legacy_blast" version="2.2.22">
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4 <install version="1.0">
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5 <actions_group>
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6 <!-- Download the binaries for BLAST compatible with 64-bit OSX. -->
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7 <actions os="darwin" architecture="x86_64">
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8 <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="ea2df351cb8069428a8f2882b0225ef056a4056a5409c57926918dfb9797d7d7">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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9 <action type="move_directory_files">
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10 <source_directory>bin</source_directory>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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11 <destination_directory>$INSTALL_DIR</destination_directory>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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12 </action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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13 </actions>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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14 <!-- Download the binaries for BLAST compatible with 32-bit OSX. -->
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15 <actions os="darwin" architecture="i386">
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16 <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="ea2df351cb8069428a8f2882b0225ef056a4056a5409c57926918dfb9797d7d7">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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17 <action type="move_directory_files">
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18 <source_directory>bin</source_directory>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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19 <destination_directory>$INSTALL_DIR</destination_directory>
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20 </action>
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21 </actions>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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22 <!-- Download the binaries for BLAST compatible with 64-bit Linux. -->
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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23 <actions os="linux" architecture="x86_64">
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24 <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="4fa41716bb5616d811824569f7514c6ed86a3d82a3a73fc089f264f8d0d99d02">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-x64-linux.tar.gz</action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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25 <action type="move_directory_files">
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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26 <source_directory>bin</source_directory>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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27 <destination_directory>$INSTALL_DIR</destination_directory>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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28 </action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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29 </actions>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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30 <!-- Download the binaries for BLAST compatible with 32-bit Linux (i386). -->
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31 <actions os="linux" architecture="i386">
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32 <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="41109b966f6f8dd39b7445374e1464dc84b8ad1e4506b25c1a50e43eb5a7df2d">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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33 <action type="move_directory_files">
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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34 <source_directory>bin</source_directory>
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35 <destination_directory>$INSTALL_DIR</destination_directory>
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36 </action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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37 </actions>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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38 <!-- Download the binaries for BLAST compatible with 32-bit Linux (i686). -->
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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39 <actions os="linux" architecture="i686">
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40 <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="41109b966f6f8dd39b7445374e1464dc84b8ad1e4506b25c1a50e43eb5a7df2d">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action>
67fbfb9fcec2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
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41 <action type="move_directory_files">
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42 <source_directory>bin</source_directory>
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43 <destination_directory>$INSTALL_DIR</destination_directory>
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44 </action>
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45 </actions>
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46 <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. -->
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47 <action type="set_environment">
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48 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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49 </action>
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50 </actions_group>
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51 </install>
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52 <readme>
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53 *Repository Description*
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54 The package_blast_legacy_2_2_22 repository downloads and builds the legacy NCBI Blast source code v2.2.22 on various operating systems and architectures.
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55 The repository is a modification of the NCBI Blast Plus package.
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56
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57 These links provide information for building the legacy NCBI Blast package in most environments.
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58
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59 System requirements
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60 http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&amp;PAGE_TYPE=BlastDocs&amp;DOC_TYPE=Download
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61 </readme>
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62 </package>
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63 </tool_dependency>