Mercurial > repos > iuc > package_legacy_blast_2_2_22

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit e23a8ad798830209db722d5496d19ec7a5e06214
author iuc
date Mon, 01 Aug 2016 14:33:09 -0400
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<?xml version='1.0' encoding='utf-8'?>
<tool_dependency>
    <package name="legacy_blast" version="2.2.22">
        <install version="1.0">
            <actions_group>
                <!-- Download the binaries for BLAST compatible with 64-bit OSX. -->
                <actions os="darwin" architecture="x86_64">
                    <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="ea2df351cb8069428a8f2882b0225ef056a4056a5409c57926918dfb9797d7d7">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>bin</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <!-- Download the binaries for BLAST compatible with 32-bit OSX. -->
                <actions os="darwin" architecture="i386">
                    <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="ea2df351cb8069428a8f2882b0225ef056a4056a5409c57926918dfb9797d7d7">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>bin</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <!-- Download the binaries for BLAST compatible with 64-bit Linux. -->
                <actions os="linux" architecture="x86_64">
                    <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="4fa41716bb5616d811824569f7514c6ed86a3d82a3a73fc089f264f8d0d99d02">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-x64-linux.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>bin</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <!-- Download the binaries for BLAST compatible with 32-bit Linux (i386). -->
                <actions os="linux" architecture="i386">
                    <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="41109b966f6f8dd39b7445374e1464dc84b8ad1e4506b25c1a50e43eb5a7df2d">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>bin</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <!-- Download the binaries for BLAST compatible with 32-bit Linux (i686). -->
                <actions os="linux" architecture="i686">
                    <action type="download_by_url" target_filename="blast-2.2.22.tgz" sha256sum="41109b966f6f8dd39b7445374e1464dc84b8ad1e4506b25c1a50e43eb5a7df2d">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>bin</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. -->
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
*Repository Description*
The package_blast_legacy_2_2_22 repository downloads and builds the legacy NCBI Blast source code v2.2.22 on various operating systems and architectures.
The repository is a modification of the NCBI Blast Plus package.

These links provide information for building the legacy NCBI Blast package in most environments.

System requirements
http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&amp;PAGE_TYPE=BlastDocs&amp;DOC_TYPE=Download
        </readme>
    </package>
</tool_dependency>