Mercurial > repos > iuc > package_numpy_1_9

annotate tool_dependencies.xml @ 2:d6f39c80e75b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:41:25 -0400
parents 84e97f5cd3ab
children 9cc1138e5e3e
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1 <?xml version="1.0"?>
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2 <tool_dependency>
2
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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3 <package name="atlas" version="3.10.2">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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4 <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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5 </package>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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6 <package name="python" version="2.7">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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7 <repository changeset_revision="44bb4258922f" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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8 </package>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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9 <package name="numpy" version="1.9">
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10 <install version="1.0">
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11 <actions>
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12 <action type="set_environment_for_install">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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13 <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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14 <package name="atlas" version="3.10.2" />
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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15 </repository>
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16 </action>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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17 <action type="setup_python_environment">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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18 <repository changeset_revision="44bb4258922f" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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19 <package name="python" version="2.7" />
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20 </repository>
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21 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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22 <package>https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz#md5#78842b73560ec378142665e712ae4ad9</package>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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23 </action>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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24 <action type="set_environment">
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25 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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26 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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27 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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28 <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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29 <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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30 <environment_variable action="set_to" name="NUMPY_ROOT_DIR">$INSTALL_DIR</environment_variable>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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31 </action>
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32 </actions>
d6f39c80e75b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
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33 </install>
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34 <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme>
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35 </package>
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36 </tool_dependency>