Mercurial > repos > iuc > package_progressivemauve_2_4_0

comparison tool_dependencies.xml @ 0:0aeb3a1b5106 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_progressivemauve_2_4_0 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
author iuc
date Fri, 17 Jul 2015 14:21:34 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:0aeb3a1b5106
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="progressivemauve" version="2.4.0">
4 <install version="1.0">
5 <actions_group>
6 <actions os="linux" architecture="x86_64">
7 <action type="download_by_url">http://darlinglab.org/mauve/downloads/mauve_linux_2.4.0.tar.gz</action>
8 <action type="move_file">
9 <source>linux-x64/progressiveMauve</source>
10 <destination>$INSTALL_DIR/bin</destination>
11 </action>
12 <action type="move_file">
13 <source>linux-x64/mauveAligner</source>
14 <destination>$INSTALL_DIR/bin</destination>
15 </action>
16 </actions>
17
18 <actions os="darwin" architecture="x86_64">
19 <action type="download_by_url">http://darlinglab.org/mauve/downloads/Mauve-2.4.0.dmg </action>
20 <action type="shell_command">
21 hdiutil attach Mauve-2.4.0.dmg &amp;&amp;
22 mkdir -p $INSTALL_DIR/bin &amp;&amp;
23 cp /Volumes/Mauve-2.4.0/Mauve.app/Contents/MacOS/progressiveMauve $INSTALL_DIR/bin &amp;&amp;
24 cp /Volumes/Mauve-2.4.0/Mauve.app/Contents/MacOS/mauveAligner $INSTALL_DIR/bin &amp;&amp;
25 hdiutil detach /Volumes/Mauve-2.4.0
26 </action>
27 </actions>
28 <action type="set_environment">
29 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
30 </action>
31 </actions_group>
32 </install>
33 <readme><![CDATA[
34 Mauve is free of charge, open-source software licensed under the GNU GPL.
35
36 Mauve is a system for constructing multiple genome alignments in the presence
37 of large-scale evolutionary events such as rearrangement and inversion.
38 Multiple genome alignments provide a basis for research into comparative
39 genomics and the study of genome-wide evolutionary dynamics.
40
41 http://darlinglab.org/mauve/
42 ]]>
43 </readme>
44 </package>
45 </tool_dependency>